60,700 results on '"Jonsson"'
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2. Beyond the Silver Bullet: Unveiling Multiple Pathways to School Turnaround. EdWorkingPaper No. 24-979
- Author
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Annenberg Institute for School Reform at Brown University, Stefan Arora-Jonsson, Ema Kristina Demir, Axel Norgren, and Karl Wennberg
- Abstract
Research on school improvement has accumulated an extensive list of factors that facilitate turnarounds at underperforming schools. Given that contextual or resource constraints may limit the possibilities of putting all of these factors in place, an important question is what is necessary and sufficient to turn a school around. We use a qualitative comparative analysis (QCA) of 77 Swedish schools studied over 12 years to answer this question. Our core finding is that there is no "silver bullet" solution. There are, instead, several distinct combinations of factors that can enable a turnaround. The local school context is essential for which combinations of factors are necessary and sufficient for school turnaround. We discuss implications for research on school improvement and education policy.
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- 2024
3. Healthy Live Births Should be Considered as Competing Events when Estimating the Total Effect of Prenatal Medication Use on Pregnancy Outcomes
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Latour, Chase D., Klose, Mark, Edwards, Jessie K., Song, Zoey, Funk, Michele Jonsson, and Wood, Mollie E.
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Statistics - Applications - Abstract
Pregnancy loss is recognized as an important competing event in studies of prenatal medication use. However, a healthy live birth also precludes subsequent adverse pregnancy outcomes, yet these events are often censored. Using Monte Carlo simulation, we examine bias that results from failure to account for healthy live birth as a competing event in estimates of the total effect of prenatal medication use on pregnancy outcomes. We simulated data for 12 trials estimating the effect of antihypertensive initiation versus non-initiation on two outcomes: (1) composite fetal death or severe prenatal preeclampsia and (2) small-for-gestational-age (SGA) live birth. We used time-to-event methods to estimate absolute risks, risk differences and risk ratios. For the composite outcome, we conducted two analyses where non-preeclamptic live birth was (1) a censoring event and (2) a competing event. For SGA live birth, we conducted three analyses where fetal death and non-SGA live birth were (1) censoring events, (2) a competing event and censoring event, respectively; and (3) competing events. In all analyses, censoring healthy live births led to inflated absolute risk estimates as well as bias and imprecise treatment effect estimates. Studies of prenatal exposures on pregnancy outcomes should analyze healthy live births as competing risks to estimate unbiased total treatment effects., Comment: 33 pages, 4 figures
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- 2024
4. Towards a Parameterized Approximation Dichotomy of MinCSP for Linear Equations over Finite Commutative Rings
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Dabrowski, Konrad K., Jonsson, Peter, Ordyniak, Sebastian, Osipov, George, and Wahlstroem, Magnus
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Computer Science - Data Structures and Algorithms ,F.2.2 ,G.2 - Abstract
We consider the MIN-r-LIN(R) problem: given a system S of length-r linear equations over a ring R, find a subset of equations Z of minimum cardinality such that S-Z is satisfiable. The problem is NP-hard and UGC-hard to approximate within any constant even when r=|R|=2, so we focus on parameterized approximability with solution size as the parameter. For a large class of infinite rings R called Euclidean domains, Dabrowski et al. [SODA-2023] obtained an FPT-algorithm for MIN-2-LIN(R) using an LP-based approach based on work by Wahlstr\"om [SODA-2017]. Here, we consider MIN-r-LIN(R) for finite commutative rings R, initiating a line of research with the ultimate goal of proving dichotomy theorems that separate problems that are FPT-approximable within a constant from those that are not. A major motivation is that our project is a promising step for more ambitious classification projects concerning finite-domain MinCSP and VCSP. Dabrowski et al.'s algorithm is limited to rings without zero divisors, which are only fields among finite commutative rings. Handling zero divisors seems to be an insurmountable obstacle for the LP-based approach. In response, we develop a constant-factor FPT-approximation algorithm for a large class of finite commutative rings, called Bergen rings, and thus prove approximability for chain rings, principal ideal rings, and Z_m for all m>1. We complement the algorithmic result with powerful lower bounds. For r>2, we show that the problem is not FPT-approximable within any constant (unless FPT=W[1]). We identify the class of non-Helly rings for which MIN-2-LIN(R) is not FPT-approximable. Under ETH, we also rule out (2-e)-approximation for every e>0 for non-lineal rings, which includes e.g. rings Z_{pq} where p and q are distinct primes. Towards closing the gaps between upper and lower bounds, we lay the foundation of a geometric approach for analysing rings.
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- 2024
5. APOKASC-3: The Third Joint Spectroscopic and Asteroseismic catalog for Evolved Stars in the Kepler Fields
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Pinsonneault, Marc H., Zinn, Joel C., Tayar, Jamie, Serenelli, Aldo, Garcia, Rafael A., Mathur, Savita, Vrard, Mathieu, Elsworth, Yvonne P., Mosser, Benoit, Stello, Dennis, Bell, Keaton J., Bugnet, Lisa, Corsaro, Enrico, Gaulme, Patrick, Hekker, Saskia, Hon, Marc, Huber, Daniel, Kallinger, Thomas, Cao, Kaili, Johnson, Jennifer A., Liagre, Bastien, Patton, Rachel A., Santos, Angela R. G., Basu, Sarbani, Beck, Paul G., Beers, Timothy C., Chaplin, William J., Cunha, Katia, Frinchaboy, Peter M., Girardi, Leo, Godoy-Rivera, Diego, Holtzman, Jon A., Jonsson, Henrik, Meszaros, Szabolcs, Reyes, Claudia, Rix, Hans-Walter, Shetrone, Matthew, Smith, Verne V., Spoo, Taylor, Stassun, Keivan G., and Wang, Ji
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Astrophysics - Solar and Stellar Astrophysics - Abstract
In the third APOKASC catalog, we present data for the complete sample of 15,808 evolved stars with APOGEE spectroscopic parameters and Kepler asteroseismology. We used ten independent asteroseismic analysis techniques and anchor our system on fundamental radii derived from Gaia $L$ and spectroscopic $T_{\rm eff}$. We provide evolutionary state, asteroseismic surface gravity, mass, radius, age, and the spectroscopic and asteroseismic measurements used to derive them for 12,418 stars. This includes 10,036 exceptionally precise measurements, with median fractional uncertainties in \nmax, \dnu, mass, radius and age of 0.6\%, 0.6\%, 3.8\%, 1.8\%, and 11.1\% respectively. We provide more limited data for 1,624 additional stars which either have lower quality data or are outside of our primary calibration domain. Using lower red giant branch (RGB) stars, we find a median age for the chemical thick disk of $9.14 \pm 0.05 ({\rm ran}) \pm 0.9 ({\rm sys})$ Gyr with an age dispersion of 1.1 Gyr, consistent with our error model. We calibrate our red clump (RC) mass loss to derive an age consistent with the lower RGB and provide asymptotic GB and RGB ages for luminous stars. We also find a sharp upper age boundary in the chemical thin disk. We find that scaling relations are precise and accurate on the lower RGB and RC, but they become more model dependent for more luminous giants and break down at the tip of the RGB. We recommend the usage of multiple methods, calibration to a fundamental scale, and the usage of stellar models to interpret frequency spacings., Comment: 43 pages, 25 figures, submitted ApJSupp. Comments welcome. Data tables available on request from pinsonneault.1@osu.edu
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- 2024
6. Global Seismic Monitoring using Operational Subsea Cable
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Mazur, Mikael, Karrenbach, Martin, Fontaine, Nicolas K., Ryf, Roland, Kamalov, Valey, Dallachiesa, Lauren, Jonsson, Örn, Hlynsson, Andre Anar, Hlynsson, Sigurdur, Chen, Haoshuo, Winter, David, Neilson, David T., Ruiz-Angulo, Angel, and Hjorleifsdottir, Vala
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Physics - Geophysics ,Electrical Engineering and Systems Science - Signal Processing - Abstract
We report tele-seismic waves detection from multiple earthquakes on an operational subsea cable from Iceland to Ireland. Using per-span laser interferometry with 100km spacing, we report clear detection of S-, P- and surface waves from multiple world-wide earthquakes, enabling seismic analysis for early warning applications., Comment: 3 pages, 2 figures. Conference submission
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- 2024
7. On Adaptive Frequency Sampling for Data-driven MOR Applied to Antenna Responses
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Åkerstedt, Lucas, Blanco, Darwin, and Jonsson, B. L. G.
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Electrical Engineering and Systems Science - Systems and Control ,Physics - Computational Physics ,G.1.1 ,J.2 - Abstract
Frequency domain sweeps of array antennas are well-known to be time-intensive, and different surrogate models have been used to improve the performance. Data-driven model order reduction algorithms, such as the Loewner framework and vector fitting, can be integrated with these adaptive error estimates, in an iterative algorithm, to reduce the number of full-wave simulations required to accurately capture the requested frequency behavior of multiport array antennas. In this work, we propose two novel adaptive methods exploiting a block matrix function which is a key part of the Loewner framework generating system approach. The first algorithm leverages an inherent matrix parameter freedom in the block matrix function to identify frequency points with large errors, whereas the second utilizes the condition number of the block matrix function. Both methods effectively provide frequency domain error estimates, which are essential for improved performance. Numerical experiments on multiport array antenna S-parameters demonstrate the effectiveness of our proposed algorithms within the Loewner framework., Comment: 10 pages, 12 figures
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- 2024
8. Advanced perturbation scheme for efficient polarizability computations
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Nair, Anoop Ajaya Kumar, Bessner, Julian, Jacob, Timo, and Jónsson, Elvar Örn
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Physics - Chemical Physics - Abstract
We present an efficient momentum based perturbation scheme to evaluate polarizability tensors of small molecules and at the fraction of the computational cost compared to conventional energy based perturbation schemes. Furthermore, the simplicity of the scheme allows for the seamless integration into modern quantum chemistry codes. We apply the method to systems where the wavefunctions are described on a real-space grid and are therefore not subject to finite size basis set errors. In the grid-based scheme errors can be attributed to the resolution and the size of the grid-space. The applicability and generality of the method is exhibited by calculating polarizability tensors including the dipole-dipole and up to the quadrupole-quadrupole for a series of small molecules, representing the most common symmetry groups. By a direct comparison with standard techniques based on energy perturbation we show that the method reduces the number of explicit computations by a factor of 30. Numerical errors introduced due to the arrangement of the explicit point charges are eliminated with an extrapolation scheme to the effective zero-perturbation limit., Comment: 12 pages, 7 figures
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- 2024
9. Doping-Induced Enhancement of Hydrogen Evolution at MoS2 Electrodes
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Hanslin, Sander Ø., Jónsson, Hannes, and Akola, Jaakko
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Condensed Matter - Materials Science ,Condensed Matter - Mesoscale and Nanoscale Physics ,Physics - Chemical Physics ,Physics - Computational Physics - Abstract
Rate theory and DFT calculations of hydrogen evolution reaction (HER) on MoS2 with Co, Ni and Pt impurities show the significance of dihydrogen (H2*) complex where both hydrogen atoms are interacting with the surface. Stabilization of such a complex affects the competing Volmer-Heyrovsky (direct H2 release) and Volmer-Tafel (H2* intermediate) pathways. The resulting evolution proceeds with a very small overpotential for all dopants ($\eta$ = 0.1 to 0.2 V) at 25% edge substitution, significantly reduced from the already low $\eta$ = 0.27 V for the undoped edge. At full edge substitution, Co-MoS2 remains highly active ($\eta$ = 0.18 V) while Ni- and Pt-MoS2 are deactivated ($\eta$ = 0.4 to 0.5 V) due to unfavorable interaction with H2*. Instead of the single S-vacancy, the site of intrinsic activity in the basal plane was found to be the undercoordinated central Mo-atom in threefold S-vacancy configurations, enabling hydrogen evolution with $\eta$ = 0.52 V via a H2* intermediate. The impurity atoms interact favorably with the intrinsic sulfur vacancies on the basal plane, stabilizing but simultaneously deactivating the triple vacancy configuration. The calculated shifts in overpotential are consistent with reported measurements, and the dependence on doping level may explain variations in experimental observations.
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- 2024
- Full Text
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10. Tractable Offline Learning of Regular Decision Processes
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Deb, Ahana, Cipollone, Roberto, Jonsson, Anders, Ronca, Alessandro, and Talebi, Mohammad Sadegh
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Computer Science - Machine Learning ,Computer Science - Artificial Intelligence ,Computer Science - Formal Languages and Automata Theory - Abstract
This work studies offline Reinforcement Learning (RL) in a class of non-Markovian environments called Regular Decision Processes (RDPs). In RDPs, the unknown dependency of future observations and rewards from the past interactions can be captured by some hidden finite-state automaton. For this reason, many RDP algorithms first reconstruct this unknown dependency using automata learning techniques. In this paper, we show that it is possible to overcome two strong limitations of previous offline RL algorithms for RDPs, notably RegORL. This can be accomplished via the introduction of two original techniques: the development of a new pseudometric based on formal languages, which removes a problematic dependency on $L_\infty^\mathsf{p}$-distinguishability parameters, and the adoption of Count-Min-Sketch (CMS), instead of naive counting. The former reduces the number of samples required in environments that are characterized by a low complexity in language-theoretic terms. The latter alleviates the memory requirements for long planning horizons. We derive the PAC sample complexity bounds associated to each of these techniques, and we validate the approach experimentally., Comment: To appear in EWRL 2024
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- 2024
11. Revisiting N$_2$ with Neural-Network-Supported CI
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Schmerwitz, Yorick L. A., Thirion, Louis, Levi, Gianluca, Jónsson, Elvar Ö., Bilous, Pavlo, Jónsson, Hannes, and Hansmann, Philipp
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Physics - Chemical Physics - Abstract
We apply a recently proposed computational protocol for a neural-network-supported configuration interaction (NN CI) calculation to the paradigmatic N$_2$ molecule. By comparison of correlation energy, binding energy, and the full dissociation curve to experimental and full CI benchmarks, we demonstrate the applicability and robustness of our approach for the first time in the context of molecular systems, and offer thereby a new complementary tool in the family of machine-learning-based computation methods. The main advantage of the method lies in the efficiency of the neural-network-selected many-body basis set. Specifically, we approximate full CI results obtained on bases of $\approx 10^{10}$ Slater Determinants with only $\approx10^{5}$ determinants with good accuracy. The high efficiency of the NN CI approach underlines its potential for broader applications such as structural optimizations and even computation of spectroscopic observables in systems for which computational resources are a limiting factor., Comment: 8 pages, 4 figures
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- 2024
12. Silver electrodes are highly selective for CO in CO$_2$ electroreduction due to interplay between voltage dependent kinetics and thermodynamics
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Fiorentin, Michele Re, Risplendi, Francesca, Salvini, Clara, Zeng, Juqin, Cicero, Giancarlo, and Jónsson, Hannes
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Condensed Matter - Materials Science - Abstract
Electrochemical reduction is a promising way to make use of CO$_2$ as feedstock for generating renewable fuel and valuable chemicals. Several metals can be used in the electrocatalyst to generate CO and formic acid but hydrogen formation is an unwanted side reaction that can even be dominant. The lack of selectivity is in general a significant problem, but silver-based electrocatalysts have been shown to be highly selective for CO with over over 90% faradaic efficiency when the applied voltage is below -1 V vs. RHE. Hydrogen formation is then insignificant and little formate is formed even though it is thermodynamically favored. We present calculations of the activation free energy for the various elementary steps as a function of applied voltage at the three low index facets, Ag(111), Ag(100) and Ag(110), as well as experimental measurements on polycrystalline electrodes, to identify the reason for this high selectivity. The formation of formic acid is suppressed because of the low coverage of adsorbed hydrogen and kinetic hindrance to the formation of the HCOO* intermediate, while *COOH, a key intermediate in CO formation, is thermodynamically unstable until the applied voltage reaches -1 V vs. RHE, at which point the kinetics for its formation are more favorable than for hydrogen. The calculated results are consistent with experimental measurements carried out for acidic conditions and provide an atomic scale insight into the high CO selectivity of silver-based electrocatalysts.
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- 2024
13. (Twisted) canonical supermultiplets and their resolutions as open-closed homotopy algebras
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Jonsson, Simon
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Mathematical Physics ,High Energy Physics - Theory - Abstract
We argue that some supersymmetric multiplets can naturally be equipped with the structure of an open-closed homotopy algebra. This structure is readily described through the pure spinor superfield formalism, which in particular associates a canonical multiplet for each choice of supersymmetry algebra. We study the open-closed homotopy algebra associated to (twists of) (resolutions of) the canonical multiplet, and show that it fits into a span of open-closed homotopy algebras, extending results of Cederwall et al. arXiv:2304.01258., Comment: 28 pages
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- 2024
14. CSPs with Few Alien Constraints
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Jonsson, Peter, Lagerkvist, Victor, and Osipov, George
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Computer Science - Computational Complexity ,Computer Science - Artificial Intelligence - Abstract
The constraint satisfaction problem asks to decide if a set of constraints over a relational structure $\mathcal{A}$ is satisfiable (CSP$(\mathcal{A})$). We consider CSP$(\mathcal{A} \cup \mathcal{B})$ where $\mathcal{A}$ is a structure and $\mathcal{B}$ is an alien structure, and analyse its (parameterized) complexity when at most $k$ alien constraints are allowed. We establish connections and obtain transferable complexity results to several well-studied problems that previously escaped classification attempts. Our novel approach, utilizing logical and algebraic methods, yields an FPT versus pNP dichotomy for arbitrary finite structures and sharper dichotomies for Boolean structures and first-order reducts of $(\mathbb{N},=)$ (equality CSPs), together with many partial results for general $\omega$-categorical structures.
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- 2024
15. Notions of Fermionic Entropies of a Causal Fermion System
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Finster, Felix, Jonsson, Robert H., Lottner, Magdalena, Much, Albert, and Murro, Simone
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Mathematical Physics ,Quantum Physics - Abstract
The fermionic von Neumann entropy, the fermionic entanglement entropy and the fermionic relative entropy are defined for causal fermion systems. Our definition makes use of entropy formulas for quasi-free fermionic states in terms of the reduced one-particle density operator. Our definitions are illustrated in various examples for Dirac spinors in two- and four-dimensional Minkowski space, in the Schwarzschild black hole geometry and for fermionic lattices. We review area laws for the two-dimensional diamond and a three-dimensional spatial region in Minkowski space. The connection is made to the computation of the relative entropy using modular theory., Comment: 36 pages, LaTeX, 2 figures
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- 2024
16. Homotopy representations of extended holomorphic symmetry in holomorphic twists
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Jonsson, Simon, Kim, Hyungrok, and Young, Charles Alastair Stephen
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High Energy Physics - Theory ,Mathematical Physics ,81T13 (Primary) 17B55, 17B81, 32A38 (Secondary) - Abstract
We argue that holomorphic twists of supersymmetric field theories naturally come with a symmetry $L_\infty$-algebra that nontrivially extends holomorphic symmetry. This symmetry acts on spacetime fields only up to homotopy, and the extension is only visible at the level of higher components of the action. We explicitly compute this for the holomorphic twist of ten-dimensional supersymmetric Yang-Mills theory, which produces a nontrivial action of a higher $L_\infty$-algebra on (a graded version) of five-dimensional affine space., Comment: 26 pages. Added additional references and minor clarifications
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- 2024
17. Hierarchical Average-Reward Linearly-solvable Markov Decision Processes
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Infante, Guillermo, Jonsson, Anders, and Gómez, Vicenç
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Computer Science - Machine Learning ,Computer Science - Artificial Intelligence - Abstract
We introduce a novel approach to hierarchical reinforcement learning for Linearly-solvable Markov Decision Processes (LMDPs) in the infinite-horizon average-reward setting. Unlike previous work, our approach allows learning low-level and high-level tasks simultaneously, without imposing limiting restrictions on the low-level tasks. Our method relies on partitions of the state space that create smaller subtasks that are easier to solve, and the equivalence between such partitions to learn more efficiently. We then exploit the compositionality of low-level tasks to exactly represent the value function of the high-level task. Experiments show that our approach can outperform flat average-reward reinforcement learning by one or several orders of magnitude.
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- 2024
18. On the Rees algebra and the conductor of an ideal
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Gasanova, Oleksandra, Herzog, Jürgen, Kling, Filip Jonsson, and Moradi, Somayeh
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Mathematics - Commutative Algebra ,13A30 (Primary) 05E40 (Secondary) - Abstract
For an ideal $I$ in a Noetherian ring $R$, we introduce and study its conductor as a tool to explore the Rees algebra of $I$. The conductor of $I$ is an ideal $C(I)\subset R$ obtained from the defining ideals of the Rees algebra and the symmetric algebra of $I$ by a colon operation. Using this concept we investigate when adding an element to an ideal preserves the property of being of linear type. In this regard, a generalization of a result by Valla in terms of the conductor ideal is presented. When the conductor of a graded ideal in a polynomial ring is the graded maximal ideal, a criteria is given for when the Rees algebra and the symmetric algebra have the same Krull dimension. Finally, noting the fact that the conductor of a monomial ideal is a monomial ideal, the conductor of some families of monomial ideals, namely bounded Veronese ideals and edge ideals of graphs, are determined., Comment: 16 pages, 1 figure
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- 2024
19. Performance Evaluation of MLO for XR Streaming: Can Wi-Fi 7 Meet the Expectations?
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Carrascosa-Zamacois, Marc, Galati-Giordano, Lorenzo, Wilhelmi, Francesc, Fontanesi, Gianluca, Jonsson, Anders, Geraci, Giovanni, and Bellalta, Boris
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Computer Science - Networking and Internet Architecture ,Computer Science - Information Theory - Abstract
Extended Reality (XR) has stringent throughput and delay requirements that are hard to meet with current wireless technologies. Missing these requirements can lead to worsened picture quality, perceived lag between user input and corresponding output, and even dizziness for the end user. In this paper, we study the capability of upcoming Wi-Fi 7, and its novel support for Multi-Link Operation (MLO), to cope with these tight requirements. Our study is based on simulation results extracted from an MLO-compliant simulator that realistically reproduces VR traffic. Results show that MLO can sustain VR applications. By jointly using multiple links with independent channel access procedures, MLO can reduce the overall delay, which is especially useful in the uplink, as it has more stringent requirements than the downlink, and is instrumental in delivering the expected performance. We show that using MLO can allow more users per network than an equivalent number of links using SLO. We also show that while maintaining the same overall bandwidth, a higher number of MLO links with narrow channels leads to lower delays than a lower number of links with wider channels.
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- 2024
20. Immutable in Principle, Upgradeable by Design: Exploratory Study of Smart Contract Upgradeability
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Qasse, Ilham, Hamdaqa, Mohammad, and Jónsson, Björn Þór
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Computer Science - Software Engineering - Abstract
Smart contracts, known for their immutable nature to ensure trust via automated enforcement, have evolved to require upgradeability due to unforeseen vulnerabilities and the need for feature enhancements post-deployment. This contradiction between immutability and the need for modifications has led to the development of upgradeable smart contracts. These contracts are immutable in principle yet upgradable by design, allowing updates without altering the underlying data or state, thus preserving the contract's intent while allowing improvements. This study aims to understand the application and implications of upgradeable smart contracts on the Ethereum blockchain. By introducing a dataset that catalogs the versions and evolutionary trajectories of smart contracts, the research explores key dimensions: the prevalence and adoption patterns of upgrade mechanisms, the likelihood and occurrences of contract upgrades, the nature of modifications post-upgrade, and their impact on user engagement and contract activity. Through empirical analysis, this study identifies upgradeable contracts and examines their upgrade history to uncover trends, preferences, and challenges associated with modifications. The evidence from analyzing over 44 million contracts shows that only 3% have upgradeable characteristics, with only 0.34% undergoing upgrades. This finding underscores a cautious approach by developers towards modifications, possibly due to the complexity of upgrade processes or a preference for maintaining stability. Furthermore, the study shows that upgrades are mainly aimed at feature enhancement and vulnerability mitigation, particularly when the contracts' source codes are accessible. However, the relationship between upgrades and user activity is complex, suggesting that additional factors significantly affect the use of smart contracts beyond their evolution.
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- 2024
21. Bisimulation Metrics are Optimal Transport Distances, and Can be Computed Efficiently
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Calo, Sergio, Jonsson, Anders, Neu, Gergely, Schwartz, Ludovic, and Segovia-Aguas, Javier
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Computer Science - Machine Learning ,Mathematics - Optimization and Control ,Statistics - Machine Learning - Abstract
We propose a new framework for formulating optimal transport distances between Markov chains. Previously known formulations studied couplings between the entire joint distribution induced by the chains, and derived solutions via a reduction to dynamic programming (DP) in an appropriately defined Markov decision process. This formulation has, however, not led to particularly efficient algorithms so far, since computing the associated DP operators requires fully solving a static optimal transport problem, and these operators need to be applied numerous times during the overall optimization process. In this work, we develop an alternative perspective by considering couplings between a flattened version of the joint distributions that we call discounted occupancy couplings, and show that calculating optimal transport distances in the full space of joint distributions can be equivalently formulated as solving a linear program (LP) in this reduced space. This LP formulation allows us to port several algorithmic ideas from other areas of optimal transport theory. In particular, our formulation makes it possible to introduce an appropriate notion of entropy regularization into the optimization problem, which in turn enables us to directly calculate optimal transport distances via a Sinkhorn-like method we call Sinkhorn Value Iteration (SVI). We show both theoretically and empirically that this method converges quickly to an optimal coupling, essentially at the same computational cost of running vanilla Sinkhorn in each pair of states. Along the way, we point out that our optimal transport distance exactly matches the common notion of bisimulation metrics between Markov chains, and thus our results also apply to computing such metrics, and in fact our algorithm turns out to be significantly more efficient than the best known methods developed so far for this purpose.
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- 2024
22. Single Atom Substituents in Copper Surfaces May Adsorb Multiple CO Molecules
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Christiansen, Magnus A. H., Peña-Torres, Alejandro, Jónsson, Elvar Ö., and Jónsson, Hannes
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Condensed Matter - Materials Science - Abstract
Copper is a good CO2 electroreduction catalyst as products beyond CO form, but efficiency and selectivity is low. Experiments have shown that admixture of other elements can help, and computational screening studies have pointed out various promising candidates based on the adsorption of a single CO molecule as a descriptor. Our calculations of CO adsorption on surfaces where a first row transition metal atom replaces a Cu atom show that multiple CO molecules, not just one, bind to the substitutional atom. For Fe, Co, and Ni atoms, a decrease in binding energy is found, but the reverse trend, namely increasing bond strength, is found for V, Cr, and Mn and the first three CO molecules. Magnetic moment, charge, and position of the substitutional atom are also strongly affected by the CO adsorption in most cases. Magnetic moment is stepwise reduced to zero, and the outward displacement of the substitutional atom increased., Comment: 8 pages, 2 figures
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- 2024
23. Bioimpedance and NIR for non-invasive assessment of blood glucose
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Andersen Jan-Hugo, Bjerke Olav, Blakaj Fatos, Flugsrud Vilde Moe, Jacobsen Fredrik Alstad, Jonsson Marius, Kosaka Eirik Nobuki, Langstrand Petter André, Martinsen Øyvind Grannes, Moen Alexander Stene, Moen Emily Qing Zang, Nystad Øyvind Knutsen, Olesen Eline, Qureshi Mahum, Risopatron Victor Jose Østrem, Ruud Simen Kristoffer, Stensø Nikolai, Winje Fredrik Lindseth, Winness Eirik Vetle, Abie Sisay, Joten Vegard Munkeby, Tronstad Christian, Elvebakk Ole, and Martinsen Ørjan Grøttem
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bioimpedance ,near-infrared spectroscopy ,nir ,glucose ,diabetes ,Medicine (General) ,R5-920 - Abstract
Sixteen volunteers each drank 700 ml sugar-containing soft drink during two successive periods and the blood sugar was measured at 10 min intervals together with electrical impedance spectroscopy and near infrared spectroscopy (NIR). A maximum correlation of 0.46 was found for the electrical measurements but no clear separation between low and high blood glucose levels were found in the NIR measurements. The latter was attributed to the experimental design where the NIR probe was removed from the skin between each measurement.
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- 2019
- Full Text
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24. Phenotypic plasticity and epigenetics of fish: embryo temperature affects later-developing traits
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Jonsson, B and Jonsson, N
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Biology (General) ,QH301-705.5 ,Microbiology ,QR1-502 - Abstract
Temperature during embryonic development affects ecological traits and influences the ability to rapidly adapt to the prevailing conditions in changing environments. Here, we review examples of how these developmental effects are manifested in life-history traits from studies of various fish species, with examples of impacts on somatic growth, age at migration and maturation, gonad allocation and egg size. Temperature during embryogenesis appears important for some behavioural decisions, such as when maturing Atlantic salmon Salmo salar return home from the ocean for spawning in distant rivers during summer. In some species, early temperature influences sex determination. The temperature level during embryogenesis may preadapt the fish to maximize offspring production under the thermal conditions encountered at the embryo stage. This thermal influence is a phenotypically plastic response that triggers polyphenism in salmonids and may be a first step in speciation of North American darters (Percidae). The responses to early temperature appear to be regulated by epigenetic mechanisms, such as DNA methylation, histone modification and micro RNAs.
- Published
- 2019
- Full Text
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25. SIMS: A deep-learning label transfer tool for single-cell RNA sequencing analysis
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Gonzalez-Ferrer, Jesus, Lehrer, Julian, O’Farrell, Ash, Paten, Benedict, Teodorescu, Mircea, Haussler, David, Jonsson, Vanessa D, and Mostajo-Radji, Mohammed A
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Information and Computing Sciences ,Biological Sciences ,Machine Learning ,Stem Cell Research - Induced Pluripotent Stem Cell - Human ,Networking and Information Technology R&D (NITRD) ,Neurosciences ,Stem Cell Research ,Human Genome ,Bioengineering ,Stem Cell Research - Induced Pluripotent Stem Cell ,Machine Learning and Artificial Intelligence ,Genetics ,1.1 Normal biological development and functioning ,Neurological ,Single-Cell Analysis ,Humans ,Deep Learning ,Sequence Analysis ,RNA ,Animals ,Brain ,Neurons ,Organoids ,Cell Differentiation ,Mice ,RNA sequencing ,TabNet ,brain organoids ,cell atlas ,label transfer ,machine learning ,neurodevelopment ,neuroscience data ,reference mapping ,single cell analysis - Abstract
Cell atlases serve as vital references for automating cell labeling in new samples, yet existing classification algorithms struggle with accuracy. Here we introduce SIMS (scalable, interpretable machine learning for single cell), a low-code data-efficient pipeline for single-cell RNA classification. We benchmark SIMS against datasets from different tissues and species. We demonstrate SIMS's efficacy in classifying cells in the brain, achieving high accuracy even with small training sets (
- Published
- 2024
26. Fine Tuning of the Rotational Rate of Light-Driven, Second Generation Molecular Motors by Fluorine Substitutions
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Tambovtsev, Ivan, Schmerwitz, Yorick L. A., Levi, Gianluca, Darmoroz, Darina D., Nesterov, Pavel V., Orlova, Tetiana, and Jónsson, Hannes
- Subjects
Physics - Chemical Physics - Abstract
The relaxation time of several second generation molecular motors is analysed by calculating the minimum energy path between the metastable and stable states and evaluating the transition rate within harmonic transition state theory based on energetics obtained from density functional theory. Comparison with published experimental data shows remarkably good agreement and demonstrates the predictive capability of the theoretical approach. While previous measurements by Feringa and coworkers [Chem.\,Eur.\,J.\,(2017) 23, 6643] have shown that a replacement of the stereogenic hydrogen by a fluorine atom increases the relaxation time because of destabilization of the transition state for the thermal helix inversion, we find that a replacement of CH$_3$ by a CF$_3$ group at the same site shortens the relaxation time because of elevated energy of the metastable state without a significant shift in the transition state energy. Since these two fluorine substitutions have an opposite effect on the relaxation time, the two combined can provide a way to fine tune the rotational speed of a molecular motor.
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- 2024
27. First joint oscillation analysis of Super-Kamiokande atmospheric and T2K accelerator neutrino data
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Super-Kamiokande, collaborations, T2K, Abe, S., Abe, K., Akhlaq, N., Akutsu, R., Alarakia-Charles, H., Ali, A., Hakim, Y. I. Alj, Monsalve, S. Alonso, Amanai, S., Andreopoulos, C., Anthony, L. H. V., Antonova, M., Aoki, S., Apte, K. A., Arai, T., Arihara, T., Arimoto, S., Asada, Y., Asaka, R., Ashida, Y., Atkin, E. T., Babu, N., Barbi, M., Barker, G. J., Barr, G., Barrow, D., Bates, P., Batkiewicz-Kwasniak, M., Beauchêne, A., Berardi, V., Berns, L., Bhadra, S., Bhuiyan, N., Bian, J., Blanchet, A., Blondel, A., Bodur, B., Bolognesi, S., Bordoni, S., Boyd, S. B., Bravar, A., Bronner, C., Bubak, A., Avanzini, M. Buizza, Burton, G. T., Caballero, J. A., Calabria, N. F., Cao, S., Carabadjac, D., Carter, A. J., Cartwright, S. L., Casado, M. P., Catanesi, M. G., Cervera, A., Chakrani, J., Chalumeau, A., Chen, S., Cherdack, D., Choi, K., Chong, P. S., Chvirova, A., Cicerchia, M., Coleman, J., Collazuol, G., Cook, L., Cormier, F., Cudd, A., Dalmazzone, C., Daret, T., Dasgupta, P., Davis, C., Davydov, Yu. I., De Roeck, A., De Rosa, G., Dealtry, T., Delogu, C. C., Densham, C., Dergacheva, A., Dharmapal, R., Di Lodovico, F., Lopez, G. Diaz, Dolan, S., Douqa, D., Doyle, T. A., Drapier, O., Duffy, K. E., Dumarchez, J., Dunne, P., Dygnarowicz, K., D'ago, D., Edwards, R., Eguchi, A., Elias, J., Emery-Schrenk, S., Erofeev, G., Ershova, A., Eurin, G., Fannon, J. E. P., Fedorova, D., Fedotov, S., Feltre, M., Feng, J., Feng, L., Ferlewicz, D., Fernandez, P., Finch, A. J., Aguirre, G. A. Fiorentini, Fiorillo, G., Fitton, M. D., Patiño, J. M. Franco, Friend, M., Fujii, Y., Fujisawa, C., Fujita, S., Fukuda, Y., Furui, Y., Gao, J., Gaur, R., Giampaolo, A., Giannessi, L., Giganti, C., Glagolev, V., Goldsack, A., Gonin, M., Rosa, J. González, Goodman, E. A. G., Gorin, A., Gorshanov, K., Gousy-Leblanc, V., Grassi, M., Griskevich, N. J., Guigue, M., Hadley, D., Haigh, J. T., Han, S., Harada, M., Harris, D. A., Hartz, M., Hasegawa, T., Hassani, S., Hastings, N. C., Hayato, Y., Heitkamp, I., Henaff, D., Hill, J., Hino, Y., Hiraide, K., Hogan, M., Holeczek, J., Holin, A., Holvey, T., Van, N. T. Hong, Honjo, T., Horiuchi, S., Hosokawa, K., Hu, Z., Hu, J., Iacob, F., Ichikawa, A. K., Ieki, K., Ikeda, M., Iovine, N., Ishida, T., Ishino, H., Ishitsuka, M., Ishizuka, T., Ito, H., Itow, Y., Izmaylov, A., Izumiyama, S., Jakkapu, M., Jamieson, B., Jang, M. C., Jang, J. S., Jenkins, S. J., Jesús-Valls, C., Ji, J. Y., Jia, M., Jiang, J., Jonsson, P., Joshi, S., Jung, C. K., Jung, S., Kabirnezhad, M., Kaboth, A. C., Kajita, T., Kakuno, H., Kameda, J., Kanemura, Y., Kaneshima, R., Karpova, S., Kasetti, S. P., Kashiwagi, Y., Kasturi, V. S., Kataoka, Y., Katori, T., Kawamura, Y., Kawaue, M., Kearns, E., Khabibullin, M., Khotjantsev, A., Kikawa, T., Kim, S. B., King, S., Kiseeva, V., Kisiel, J., Kneale, L., Kobayashi, H., Kobayashi, T., Kobayashi, M., Koch, L., Kodama, S., Kolupanova, M., Konaka, A., Kormos, L. L., Koshio, Y., Koto, T., Kowalik, K., Kudenko, Y., Kudo, Y., Kuribayashi, S., Kurjata, R., Kurochka, V., Kutter, T., Kuze, M., Kwon, E., La Commara, M., Labarga, L., Lachat, M., Lachner, K., Lagoda, J., Lakshmi, S. M., LamersJames, M., Langella, A., Laporte, J. -F., Last, D., Latham, N., Laveder, M., Lavitola, L., Lawe, M., Learned, J. G., Lee, Y., Lee, S. H., Silverio, D. Leon, Levorato, S., Lewis, S., Li, X., Li, W., Lin, C., Litchfield, R. P., Liu, S. L., Liu, Y. M., Long, K. R., Longhin, A., Moreno, A. Lopez, Lu, X., Ludovici, L., Lux, T., Machado, L. N., Maekawa, Y., Magaletti, L., Mahn, K., Mahtani, K. K., Malek, M., Mandal, M., Manly, S., Marino, A. D., Martens, K., Marti, Ll., Martin, D. G. R., Martin, J. F., Martin, D., Martini, M., Maruyama, T., Matsubara, T., Matsumoto, R., Mattiazzi, M., Matveev, V., Mauger, C., Mavrokoridis, K., Mazzucato, E., McCauley, N., McElwee, J. M., McFarland, K. S., McGrew, C., McKean, J., Mefodiev, A., Megias, G. D., Mehta, P., Mellet, L., Menjo, H., Metelko, C., Mezzetto, M., Migenda, J., Mijakowski, P., Miki, S., Miller, E., Minamino, A., Mine, S., Mineev, O., Mirabito, J., Miura, M., Bueno, L. Molina, Moon, D. H., Mori, M., Moriyama, S., Morrison, P., Muñoz, A., Mueller, Th. A., Munford, D., Munteanu, L., Nagai, Y., Nagai, K., Nakadaira, T., Nakagiri, K., Nakahata, M., Nakajima, Y., Nakamura, A., Nakamura, K., Nakamura, K. D., Nakamura, T., Nakanishi, F., Nakano, Y., Nakaya, T., Nakayama, S., Nakayoshi, K., Naseby, C. E. R., Ngoc, T. V., Nguyen, V. Q., Nguyen, D. T., Nicholson, M., Niewczas, K., Ninomiya, K., Nishijima, K., Nishimori, S., Nishimura, Y., Noguchi, Y., Nosek, T., Nova, F., Novella, P., Nugent, J. C., Odagawa, T., Okazaki, R., Okazawa, H., Okinaga, W., Okumura, K., Okusawa, T., Ommura, Y., Onda, N., Ospina, N., Osu, L., Oyama, Y., O'Flaherty, M., O'Keeffe, H. M., O'Sullivan, L., Périssé, L., Paganini, P., Palladino, V., Paolone, V., Pari, M., Park, R. G., Parlone, J., Pasternak, J., Payne, D., Penn, G. C., de Perio, P., Pershey, D., Pfaff, M., Pickering, L., Pintaudi, G., Pistillo, C., Pointon, B. W., Popov, B., Yrey, A. Portocarrero, Porwit, K., Posiadala-Zezula, M., Prabhu, Y. S., Prasad, H., Pronost, G., Prouse, N. W., Pupilli, F., Quilain, B., Quyen, P. T., Raaf, J. L., Radermacher, T., Radicioni, E., Radics, B., Ramirez, M. A., Ramsden, R. M., Ratoff, P. N., Reh, M., Riccio, C., Richards, B., Rogly, R., Rondio, E., Roth, S., Roy, N., Rubbia, A., Russo, L., Rychter, A., Saenz, W., Sakai, S., Sakashita, K., Samani, S., Santos, A. D., Sato, Y., Sato, K., Schefke, T., Schloesser, C. M., Scholberg, K., Scott, M., Seiya, Y., Sekiguchi, T., Sekiya, H., Seo, J. W., Sgalaberna, D., Shaikhiev, A., Shi, W., Shiba, H., Shibayama, R., Shigeta, N., Shima, S., Shimamura, R., Shimizu, K., Shinoki, M., Shiozawa, M., Shiraishi, Y., Shvartsman, A., Skrobova, N., Skwarczynski, K., Smy, M. B., Smyczek, D., Sobczyk, J. T., Sobel, H. W., Soler, F. J. P., Sonoda, Y., Speers, A. J., Spina, R., Stroke, Y., Suslov, I. A., Suvorov, S., Suzuki, S., Suzuki, A., Suzuki, S. Y., Suzuki, Y., Sánchez, F., Tada, T., Tada, M., Tairafune, S., Takagi, Y., Takeda, A., Takemoto, Y., Takeuchi, Y., Takhistov, V., Takifuji, K., Tanaka, H., Tanaka, H. K., Tanigawa, H., Taniuchi, N., Tano, T., Tarrant, A., Tashiro, T., Teklu, A., Terada, K., Tereshchenko, V. V., Thamm, N., Thiesse, M. D., Thompson, L. F., Toki, W., Tomiya, T., Touramanis, C., Tsui, K. M., Tsukamoto, T., Tzanov, M., Uchida, Y., Vagins, M. R., Vargas, D., Varghese, M., Vasseur, G., Villa, E., Vinning, W. G. S., Virginet, U., Vladisavljevic, T., Wachala, T., Wakabayashi, D., Wallace, H. T., Walsh, J. G., Walter, C. W., Wan, L., Wang, X., Wang, Y., Wark, D., Wascko, M. O., Watanabe, E., Weber, A., Wendell, R. A., Wester, T., Wilking, M. J., Wilkinson, C., Wilson, S. T., Wilson, J. R., Wood, K., Wret, C., Wu, Y., Xia, J., Xie, Z., Xu, B. D., Xu, Y. -H., Yamamoto, K., Yamamoto, T., Yamauchi, K., Yanagisawa, C., Yang, G., Yang, B. S., Yang, J. Y., Yankelevich, A., Yano, T., Yasutome, K., Yershov, N., Yevarouskaya, U., Yokoyama, M., Yoo, J., Yoshida, T., Yoshida, S., Yoshimoto, Y., Yoshimura, N., Yoshioka, Y., Yu, M., Yu, I., Zaki, R., Zaldivar, B., Zalewska, A., Zalipska, J., Zaremba, K., Zarnecki, G., Zhang, J., Zhang, A. Q., Zhang, B., Zhao, X. Y., Zhong, H., Zhu, T., Ziembicki, M., Zimmerman, E. D., Zito, M., and Zsoldos, S.
- Subjects
High Energy Physics - Experiment - Abstract
The Super-Kamiokande and T2K collaborations present a joint measurement of neutrino oscillation parameters from their atmospheric and beam neutrino data. It uses a common interaction model for events overlapping in neutrino energy and correlated detector systematic uncertainties between the two datasets, which are found to be compatible. Using 3244.4 days of atmospheric data and a beam exposure of $19.7(16.3) \times 10^{20}$ protons on target in (anti)neutrino mode, the analysis finds a 1.9$\sigma$ exclusion of CP-conservation (defined as $J_{CP}=0$) and a preference for the normal mass ordering., Comment: 12 pages, 4 figures
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- 2024
28. Parsimonious Optimal Dynamic Partial Order Reduction
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Abdulla, Parosh Aziz, Atig, Mohamed Faouzi, Das, Sarbojit, Jonsson, Bengt, and Sagonas, Konstantinos
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Computer Science - Programming Languages ,Computer Science - Software Engineering - Abstract
Stateless model checking is a fully automatic verification technique for concurrent programs that checks for safety violations by exploring all possible thread schedulings. It becomes effective when coupled with Dynamic Partial Order Reduction (DPOR), which introduces an equivalence on schedulings and reduces the amount of needed exploration. DPOR algorithms that are optimal are particularly effective in that they guarantee to explore exactly one execution from each equivalence class. Unfortunately, existing sequence-based optimal algorithms may in the worst case consume memory that is exponential in the size of the analyzed program. In this paper, we present Parsimonious-OPtimal DPOR (POP), an optimal DPOR algorithm for analyzing multi-threaded programs under sequential consistency, whose space consumption is polynomial in the worst case. POP combines several novel algorithmic techniques, including (i) a parsimonious race reversal strategy, which avoids multiple reversals of the same race, (ii) an eager race reversal strategy to avoid storing initial fragments of to-be-explored executions, and (iii) a space-efficient scheme for preventing redundant exploration, which replaces the use of sleep sets. Our implementation in Nidhugg shows that these techniques can significantly speed up the analysis of concurrent programs, and do so with low memory consumption. Comparison to TruSt, a related optimal DPOR algorithm that represents executions as graphs, shows that POP's implementation achieves similar performance for smaller benchmarks, and scales much better than TruSt's on programs with long executions.
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- 2024
29. Out-of-time-order asymptotic observables are quasi-isomorphic to time-ordered amplitudes
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Borsten, Leron, Jonsson, Simon, and Kim, Hyungrok
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High Energy Physics - Theory ,Mathematical Physics ,81T18 (Primary) 17B55, 18G50 (Secondary) - Abstract
Asymptotic observables in quantum field theory beyond the familiar $S$-matrix have recently attracted much interest, for instance in the context of gravity waveforms. Such observables can be understood in terms of Schwinger-Keldysh-type 'amplitudes' computed by a set of modified Feynman rules involving cut internal legs and external legs labelled by time-folds. In parallel, a homotopy-algebraic understanding of perturbative quantum field theory has emerged in recent years. In particular, passing through homotopy transfer, the $S$-matrix of a perturbative quantum field theory can be understood as the minimal model of an associated (quantum) $L_\infty$-algebra. Here we bring these two developments together. In particular, we show that Schwinger-Keldysh amplitudes are naturally encoded in an $L_\infty$-algebra, similar to ordinary scattering amplitudes. As before, they are computed via homotopy transfer, but using deformation-retract data that are not canonical (in contrast to the conventional $S$-matrix). We further show that the $L_\infty$-algebras encoding Schwinger-Keldysh amplitudes and ordinary amplitudes are quasi-isomorphic (meaning, in a suitable sense, equivalent). This entails a set of recursion relations that enable one to compute Schwinger-Keldysh amplitudes in terms of ordinary amplitudes or vice versa., Comment: 27 pages. Published version: typos corrected and the review in sec. 5.1 includes clarifying remarks
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- 2024
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30. The tangled warp of the Milky Way
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Jónsson, Viktor Hrannar and McMillan, Paul J.
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Astrophysics - Astrophysics of Galaxies - Abstract
We determine the influence of the Milky Way's warp on the kinematics of stars across the disc, and therefore measure its precession rate and line of nodes under different assumptions. We do this by applying Jeans' first equation to a model of a rigidly precessing warp. The predictions of these models are fit to the average vertical velocities of stars with measured line-of-sight velocities in Gaia DR3 data. We test models in which the warp's line of nodes and precession speed are fixed, and models in which they are allowed to vary linearly with radius. We also test models in which the velocity of stars radially in the disc is included in Jeans' equation. The kinematic data is best fit by models with a line of nodes that is 40 degrees offset from the Sun's Galactic azimuth, significantly leading the line of nodes found from the positions of stars. These models have a warp precession speed of around 13 km/s/kpc in the direction of Galactic rotation, close to other recent estimates. We find that including the velocity of stars radially in the disc in our kinematic model leads to a significantly worse fit to the data, and implausible warp parameters. We conclude that the Milky Way's warp appears to be rapidly precessing, but the structure and kinematics of the warped disc are not consistent within the approximation of a fixed, precessing, warp shape. This implies that the Milky Way's warp is dynamically evolving, which is a challenge to models of the warp's creation, and must be considered in the context of other known disturbances of the disc., Comment: Explainer video available at https://www.youtube.com/watch?v=8Wl81JC7l7k. A&A accepted. 13 pages, 10 figures
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- 2024
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31. Experimental Evaluation of Moving Target Compensation in High Time-Bandwidth Noise Radar
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Ankel, Martin, Jonsson, Robert S., Tholen, Mats, Bryllert, Tomas, Ulander, Lars M. H., and Delsing, Per
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Electrical Engineering and Systems Science - Signal Processing - Abstract
In this article, the effect a moving target has on the signal-to-interference-plus-noise-ratio (SINR) for high time-bandwidth noise radars is investigated. To compensate for cell migration we apply a computationally efficient stretch processing algorithm that is tailored for batched processing and suitable for implementation onto a real-time radar processor. The performance of the algorithm is studied using experimental data. In the experiment, pseudorandom noise, with a bandwidth of 100 MHz, is generated and transmitted in real-time. An unmanned aerial vehicle (UAV), flown at a speed of 11 m/s, is acting as a target. For an integration time of 1 s, the algorithm is shown to yield an increase in SINR of roughly 13 dB, compared to no compensation. It is also shown that coherent integration times of 2.5 s can be achieved., Comment: Presented at 2023 20th European Radar Conference (EuRAD)
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- 2024
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32. Planning with a Learned Policy Basis to Optimally Solve Complex Tasks
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Infante, Guillermo, Kuric, David, Jonsson, Anders, Gómez, Vicenç, and van Hoof, Herke
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Computer Science - Machine Learning ,Computer Science - Artificial Intelligence - Abstract
Conventional reinforcement learning (RL) methods can successfully solve a wide range of sequential decision problems. However, learning policies that can generalize predictably across multiple tasks in a setting with non-Markovian reward specifications is a challenging problem. We propose to use successor features to learn a policy basis so that each (sub)policy in it solves a well-defined subproblem. In a task described by a finite state automaton (FSA) that involves the same set of subproblems, the combination of these (sub)policies can then be used to generate an optimal solution without additional learning. In contrast to other methods that combine (sub)policies via planning, our method asymptotically attains global optimality, even in stochastic environments.
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- 2024
33. Identification of mechanisms of magnetic transitions using an efficient method for converging on first order saddle points
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Sallermann, Moritz, Schrautzer, Hendrik, Bessarab, Pavel, and Jónsson, Hannes
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Physics - Computational Physics ,Condensed Matter - Mesoscale and Nanoscale Physics - Abstract
A method for locating first order saddle points on the energy surface of magnetic systems is described and several applications presented. The starting point of the iterative algorithm involved in the method can be anywhere, even close to a local energy minimum representing an initial state of a magnetic system and, in contrast to chain-of-states methods, the final state need not be specified. Convergence on the saddle points is guided by a negative energy gradient whose component along the minimum mode of the system is inverted, effectively transforming the neighbourhood of the saddle point to that of a local minimum. The method requires only the lowest two eigenvalues and corresponding eigenvectors of the Hessian of the system's energy and they are found using a quasi-Newton limited-memory Broyden-Fletcher-Goldfarb-Shanno solver for the minimization of the Rayleigh quotient without evaluation of the Hessian itself. The efficient implementation of the method and its linear scaling with the system size make it applicable to large systems. Applications are presented to transitions in systems that reveal significant complexity of co-existing magnetic states, such as skyrmions, skyrmion bags, skyrmion tubes, chiral bobbers and globules., Comment: 16 Pages, 10 Figures
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- 2024
34. Regularity of the solution to a real Monge--Amp\`ere equation on the boundary of a simplex
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Andreasson, Rolf, Hultgren, Jakob, Jonsson, Mattias, Mazzon, Enrica, and McCleerey, Nicholas
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Mathematics - Analysis of PDEs ,Mathematics - Differential Geometry ,35J96, 53A15 (primary), 14J32, 14J33, 14T90, 32Q25 (secondary) - Abstract
Motivated by conjectures in Mirror Symmetry, we continue the study of the real Monge--Amp\`ere operator on the boundary of a simplex. This can be formulated in terms of optimal transport, and we consider, more generally, the problem of optimal transport between symmetric probability measures on the boundary of a simplex and of the dual simplex. For suitably regular measures, we obtain regularity properties of the transport map, and of its convex potential. To do so, we exploit boundary regularity results for optimal transport maps by Caffarelli, together with the symmetries of the simplex., Comment: 13 pages
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- 2024
35. Evidence of sharp transitions between octahedral and capped trigonal prism states of the solvation shell of Fe$^{+3}$(aq)
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Goswami, Amrita, Peña-Torres, Alejandro, Jónsson, Elvar Ö., Egorov, Sergei A., and Jónsson, Hannes
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Physics - Chemical Physics - Abstract
The structure of the solvation shell of aqueous Fe$^{+3}$ ion has been a subject of controversy due to discrepancies between experiments and different levels of theory. We address this issue by performing simulations for a wide range of ion concentrations, using various empirical potential energy functions, as well as density functional theory calculations of selected configurations. The solvation shell undergoes abrupt transitions between two states: an octahedral (OH) state with 6-fold coordination, and a capped trigonal prism (CTP) state with 7-fold coordination. The lifetime of these states is concentration dependent. In dilute $\mathrm{FeCl_3}$ solutions, the lifetime of the two states is similar ($\approx 1$ ns). However, the lifetime of the OH state increases with ion concentration, while that of the CTP state decreases slightly. When a uniform negative background charge is used instead of explicit counterions, the lifetime of the OH state is greatly overestimated. These findings underscore the need for further experimental measurements as well as high-level simulations over sufficiently long timescales and low concentration.
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- 2023
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36. Genetic links between ovarian ageing, cancer risk and de novo mutation rates
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Stankovic, Stasa, Shekari, Saleh, Huang, Qin Qin, Gardner, Eugene J., Ivarsdottir, Erna V., Owens, Nick D. L., Mavaddat, Nasim, Azad, Ajuna, Hawkes, Gareth, Kentistou, Katherine A., Beaumont, Robin N., Day, Felix R., Zhao, Yajie, Jonsson, Hakon, Rafnar, Thorunn, Tragante, Vinicius, Sveinbjornsson, Gardar, Oddsson, Asmundur, Styrkarsdottir, Unnur, Gudmundsson, Julius, Stacey, Simon N., Gudbjartsson, Daniel F., Kennedy, Kitale, Wood, Andrew R., Weedon, Michael N., Ong, Ken K., Wright, Caroline F., Hoffmann, Eva R., Sulem, Patrick, Hurles, Matthew E., Ruth, Katherine S., Martin, Hilary C., Stefansson, Kari, Perry, John R. B., and Murray, Anna
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- 2024
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37. Awareness of and Attitudes Toward User Involvement in Research on Aging and Health: Protocol for a Quantitative Large-Scale Panel Study
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Kylén, Maya, Schmidt, Steven M, Jonsson, Oskar, Slaug, Björn, and Iwarsson, Susanne
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Medicine ,Computer applications to medicine. Medical informatics ,R858-859.7 - Abstract
BackgroundUser involvement is a requirement of most research funders. There is a growing body of literature exploring the benefits and challenges of user involvement in research, but such studies are scarce in the field of aging and health. Moreover, the majority of such research is qualitative, which limits the generalizability of results. The UserAge panel study will be instrumental in expanding knowledge that will benefit the quality and impact of user involvement in future research. ObjectiveThe aim of this study is to determine the awareness and understanding of and attitudes toward user involvement in research among different categories of knowledge users and researchers over time. MethodsA panel study will be implemented with 3 different categories of knowledge users (people aged 60 years and older, informal carers, and professionals in health care and architecture) and researchers in aging and health. A professional survey company will collect data from all samples in parallel. Potential participants will be asked to complete the survey via telephone or online, or participants can request a paper survey to be sent to them in the post. A draft set of questions on attitudes and behavioral patterns related to research utilization and user involvement in research was compiled based on existing literature and input from the research team. Using a participatory approach, we engaged a user forum, where 8 older people and 3 researchers jointly refined the survey for time/length to complete, terminology, readability, and context. Data collected via the internet or telephone will be automatically processed, and data collected on paper forms will be entered in machine-readable forms. The survey company will store all data and deliver the quality-controlled database to the university for further storage. Analyses of frequencies and measures of central tendency will be used for descriptive purposes. To compare groups, state-of-the art statistical analyses will be used. ResultsData collection for the first study wave started in September 2019 and will be completed in spring 2020. Data will be ready for analysis following cleaning and quality control, which started during summer 2020 and will be completed autumn 2020. We anticipate the data collection for the second study wave to start in September 2021. ConclusionsThis is the first quantitative large-scale panel study focusing on trends in attitudes toward, awareness of, and knowledge about user involvement in research on aging and health in Sweden. The results will generate new and important knowledge to advance the understanding of user needs and preferences as well as the relevance of user involvement in research on aging and health. International Registered Report Identifier (IRRID)DERR1-10.2196/17759
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- 2020
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38. Outlook of the European forest-based sector: forest growth, harvest demand, wood-product markets, and forest carbon dynamics implications
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Jonsson R, Blujdea VNB, Fiorese G, Pilli R, Rinaldi F, Baranzelli C, and Camia A
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Biomass ,Carbon Stock Change ,Forest ,Fuelwood ,Harvest ,Wood-based Products ,Forestry ,SD1-669.5 - Abstract
A comprehensive assessment of European forest-based biomass harvest potentials, their future utilization and implications on international wood product markets and forest carbon dynamics requires the capability to model forest resource development as well as global markets for wood-based commodities with sufficient geographical and product detail and, most importantly, their interactions. To this aim, we apply a model framework fully integrating a European forest resource model and a global economic forest sector model. In a business-as-usual (BaU) scenario, European Union harvests increase seven percent by 2030 compared to past levels (485 million m3 on 2000-2012 average and 517 million m3 in 2030). The subsequent annual carbon stock change is a ten percent reduction by 2030 compared to 2000-2012 average (equal to 119.3 Tg C yr-1), corresponding to decreasing carbon-dioxide removal by the European forests. A second, high mobilization scenario (HM), characterized by the full utilization of the potential wood supply and a doubling of EU wood pellets consumption, was designed to explore potential impacts on forest carbon dynamics and international wood product markets under intensive exploitation of biomass resources. In the HM scenario, harvest increases by 55% (754 million m3 in 2030) compared to the BaU scenario. Fuelwood accounts for this increase in harvest levels as overall competition effects from increased wood pellets consumption outweighs synergies for material uses of wood, resulting in slightly reduced harvests of industrial roundwood. As expected, this increasing harvest level would significantly impair carbon-dioxide forest sequestration from the atmosphere in the medium term (-83% in 2030, compared to 2000-2012 average).
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- 2018
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39. GPAW: An open Python package for electronic-structure calculations
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Mortensen, Jens Jørgen, Larsen, Ask Hjorth, Kuisma, Mikael, Ivanov, Aleksei V., Taghizadeh, Alireza, Peterson, Andrew, Haldar, Anubhab, Dohn, Asmus Ougaard, Schäfer, Christian, Jónsson, Elvar Örn, Hermes, Eric D., Nilsson, Fredrik Andreas, Kastlunger, Georg, Levi, Gianluca, Jónsson, Hannes, Häkkinen, Hannu, Fojt, Jakub, Kangsabanik, Jiban, Sødequist, Joachim, Lehtomäki, Jouko, Heske, Julian, Enkovaara, Jussi, Winther, Kirsten Trøstrup, Dulak, Marcin, Melander, Marko M., Ovesen, Martin, Louhivuori, Martti, Walter, Michael, Gjerding, Morten, Lopez-Acevedo, Olga, Erhart, Paul, Warmbier, Robert, Würdemann, Rolf, Kaappa, Sami, Latini, Simone, Boland, Tara Maria, Bligaard, Thomas, Skovhus, Thorbjørn, Susi, Toma, Maxson, Tristan, Rossi, Tuomas, Chen, Xi, Schmerwitz, Yorick Leonard A., Schiøtz, Jakob, Olsen, Thomas, Jacobsen, Karsten Wedel, and Thygesen, Kristian Sommer
- Subjects
Condensed Matter - Materials Science ,Physics - Computational Physics - Abstract
We review the GPAW open-source Python package for electronic structure calculations. GPAW is based on the projector-augmented wave method and can solve the self-consistent density functional theory (DFT) equations using three different wave-function representations, namely real-space grids, plane waves, and numerical atomic orbitals. The three representations are complementary and mutually independent and can be connected by transformations via the real-space grid. This multi-basis feature renders GPAW highly versatile and unique among similar codes. By virtue of its modular structure, the GPAW code constitutes an ideal platform for implementation of new features and methodologies. Moreover, it is well integrated with the Atomic Simulation Environment (ASE) providing a flexible and dynamic user interface. In addition to ground-state DFT calculations, GPAW supports many-body GW band structures, optical excitations from the Bethe-Salpeter Equation (BSE), variational calculations of excited states in molecules and solids via direct optimization, and real-time propagation of the Kohn-Sham equations within time-dependent DFT. A range of more advanced methods to describe magnetic excitations and non-collinear magnetism in solids are also now available. In addition, GPAW can calculate non-linear optical tensors of solids, charged crystal point defects, and much more. Recently, support of GPU acceleration has been achieved with minor modifications of the GPAW code thanks to the CuPy library. We end the review with an outlook describing some future plans for GPAW.
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- 2023
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40. Maternal inheritance influences homing and growth of hybrid offspring between wild and farmed Atlantic salmon
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Jonsson, B and Jonsson, N
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Aquaculture. Fisheries. Angling ,SH1-691 ,Ecology ,QH540-549.5 - Abstract
The occurrence of domesticated organisms in nature is a major biological issue. Many can survive and reproduce with wild conspecifics, but little is known about the ecology of the hybrid offspring. Here, we investigated recapture, homing and growth of the released offspring of farmed (domesticated) and wild Atlantic salmon Salmo salar as well as their crosses. The fish were hatchery-reared for 1 yr and released as smolts in the River Imsa, Norway, the home river of the wild fish. The released fish migrated to the ocean. Many disappeared, but between 0.6 and 2% were sampled on their return as adults 1 or 2 yr later. Homing to the river of release was low for farmed salmon (88% strays). Among hybrids, having a wild mother provided increased homing accuracy (36% strays) relative to having a wild father (64% strays). Offspring of the local River Imsa salmon exhibited the best homing (28% strays). The growth capacity of the farmed salmon appeared to be not fully utilized in nature, as there was little difference in maximum size between wild and farmed salmon. However, minimum size at maturity was larger for farmed than wild conspecifics. Inheritance from a farmed mother increased minimum size of the hybrids versus that of the pure farmed salmon. Thus, maternal inheritance from domesticated, farmed salmon decreased homing and increased minimum size at adulthood of the offspring, making domesticated salmon a risk for locally adapted salmon in nature.
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- 2017
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41. Saddle Point Search Algorithms for Variational Density Functional Calculations of Excited Electronic States with Self-Interaction Correction
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Schmerwitz, Yorick Leonard Adrian, Ollé, Núria Urgell, Levi, Gianluca, and Jónsson, Hannes
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Physics - Chemical Physics - Abstract
Excited electronic states of molecules and solids play a fundamental role in fields such as catalysis and electronics. In electronic structure calculations, excited states typically correspond to saddle points on the surface described by the variation of the energy as a function of the electronic degrees of freedom. A direct optimization algorithm based on generalized mode following is presented for density functional calculations of excited states. While conventional direct optimization methods based on quasi-Newton algorithms usually converge to the stationary point closest to the initial guess, even minima, the generalized mode following approach systematically targets a saddle point of a specific order l by following the l lowest eigenvectors of the electronic Hessian up in energy. This approach thereby recasts the challenging saddle point search as a minimization, enabling the use of efficient and robust minimization algorithms. The initial guess orbitals and the saddle point order of the target excited state solution are evaluated by performing an initial step of constrained optimization freezing the electronic degrees of freedom involved in the excitation. In the context of Kohn-Sham density functional calculations, typical approximations to the exchange-and-correlation functional suffer from a self-interaction error. The Perdew and Zunger self-interaction correction can alleviate this problem, but makes the energy variant to unitary transformations in the occupied orbital space, introducing a large amount of unphysical solutions that do not fully minimize the self-interaction error. An extension of the generalized mode following method is proposed that ensures convergence to the solution minimizing the self-interaction error., Comment: 11 pages, 3 figures
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- 2024
42. Algorithms and Complexity of Difference Logic
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Dabrowski, Konrad K., Jonsson, Peter, Ordyniak, Sebastian, and Osipov, George
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Computer Science - Data Structures and Algorithms ,Computer Science - Logic in Computer Science - Abstract
Difference Logic (DL) is a fragment of linear arithmetics where atoms are constraints x+k <= y for variables x,y (ranging over Q or Z) and integer k. We study the complexity of deciding the truth of existential DL sentences. This problem appears in many contexts: examples include verification, bioinformatics, telecommunications, and spatio-temporal reasoning in AI. We begin by considering sentences in CNF with rational-valued variables. We restrict the allowed clauses via two natural parameters: arity and coefficient bounds. The problem is NP-hard for most choices of these parameters. As a response to this, we refine our understanding by analyzing the time complexity and the parameterized complexity (with respect to well-studied parameters such as primal and incidence treewidth). We obtain a comprehensive picture of the complexity landscape in both cases. Finally, we generalize our results to integer domains and sentences that are not in CNF., Comment: This is an strongly extended version of two conference papers with the same authors that appeared at KR 2020 (Title: Fine-Grained Complexity of Temporal Problems) and AAAI 2021 (Title: Disjunctive Temporal Problems under Structural Restrictions)
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- 2024
43. Scalable Tree-based Register Automata Learning
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Dierl, Simon, Fiterau-Brostean, Paul, Howar, Falk, Jonsson, Bengt, Sagonas, Konstantinos, and Tåquist, Fredrik
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Computer Science - Formal Languages and Automata Theory - Abstract
Existing active automata learning (AAL) algorithms have demonstrated their potential in capturing the behavior of complex systems (e.g., in analyzing network protocol implementations). The most widely used AAL algorithms generate finite state machine models, such as Mealy machines. For many analysis tasks, however, it is crucial to generate richer classes of models that also show how relations between data parameters affect system behavior. Such models have shown potential to uncover critical bugs, but their learning algorithms do not scale beyond small and well curated experiments. In this paper, we present $SL^\lambda$, an effective and scalable register automata (RA) learning algorithm that significantly reduces the number of tests required for inferring models. It achieves this by combining a tree-based cost-efficient data structure with mechanisms for computing short and restricted tests. We have implemented $SL^\lambda$ as a new algorithm in RALib. We evaluate its performance by comparing it against $SL^*$, the current state-of-the-art RA learning algorithm, in a series of experiments, and show superior performance and substantial asymptotic improvements in bigger systems., Comment: 26 pages, 8 figures, to appear in TACAS 2024
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- 2024
44. Asymmetric Norms to Approximate the Minimum Action Distance
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Steccanella, Lorenzo and Jonsson, Anders
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Computer Science - Machine Learning - Abstract
This paper presents a state representation for reward-free Markov decision processes. The idea is to learn, in a self-supervised manner, an embedding space where distances between pairs of embedded states correspond to the minimum number of actions needed to transition between them. Unlike previous methods, our approach incorporates an asymmetric norm parametrization, enabling accurate approximations of minimum action distances in environments with inherent asymmetry. We show how this representation can be leveraged to learn goal-conditioned policies, providing a notion of similarity between states and goals and a useful heuristic distance to guide planning. To validate our approach, we conduct empirical experiments on both symmetric and asymmetric environments. Our results show that our asymmetric norm parametrization performs comparably to symmetric norms in symmetric environments and surpasses symmetric norms in asymmetric environments.
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- 2023
45. The Spectrum of Asymptotic Cayley Trees
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Durhuus, Bergfinnur, Jonsson, Thordur, and Wheater, John
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Quantum Physics - Abstract
We characterize the spectrum of the transition matrix for simple random walk on graphs consisting of a finite graph with a finite number of infinite Cayley trees attached. We show that there is a continuous spectrum identical to that for a Cayley tree and, in general, a non-empty pure point spectrum. We apply our results to studying continuous time quantum walk on these graphs. If the pure point spectrum is nonempty the walk is in general confined with a nonzero probability., Comment: 21 pages, 1 figure. Revised version with extended Introduction, streamlined derivation of generating function relations, and with statement of Theorem 3 corrected
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- 2023
46. Combination treatment of neuropathic pain: Danish expert recommendations based on a Delphi process
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Holbech JV, Jung A, Jonsson T, Wanning M, Bredahl C, and Bach FW
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Neuropathic pain ,combination therapy ,Delphi panel ,recommendations ,Medicine (General) ,R5-920 - Abstract
Jakob Vormstrup Holbech,1 Anne Jung,2 Torsten Jonsson,3 Mette Wanning,4 Claus Bredahl,5 Flemming W Bach6 1Department of Neurology, Odense University Hospital, Odense, 2Medicinsk Fælles Ambulatorium, Holbaek Hospital, 3Aleris-Hamlet Hospitaler Ringsted, 4The Private Pain Clinic, Herlev, 5Clinic Acute Orthopedic Surgical Anesthesia Section, Aalborg Universitetshospital, Aalborg, 6Department of Neurology, Aarhus University Hospital, Aarhus, Denmark Background: Current Danish treatment algorithms for pharmacological treatment of neuropathic pain (NeP) are tricyclic antidepressants (TCA), gabapentin and pregabalin as first-line treatment for the most common NeP conditions. Many patients have insufficient pain relief on monotherapy, but combination therapy had not been included in guidelines until recently. Based on clinical empiricism and scientific evidence, a Delphi consensus process provided a consolidated guidance on pharmacological combination treatment of NeP.Methods: A two-round virtual internet-based Delphi process with 6 Danish pain specialists was undertaken. In the first round, questions were answered individually and anonymously, whereas in the second round, the panel openly discussed first round’s summary of outcomes. Combinations of pharmacological pain treatments, that is, pregabalin/gabapentin, TCAs, serotonin-norepinephrine reuptake inhibitors (SNRIs), selective serotonin reuptake inhibitors, opioids, other antiepileptics and cutaneous patches, were assessed based on both scientific and clinical practice experiences. The Centers for Disease Control and Prevention (CDC) grading system was used for evidence rating.Results: Combination of pregabalin/gabapentin with TCA is useful in patients who do not gain sufficient pain relief or tolerate either drug in high doses, or to improve sleep disturbance. Also, combination of pregabalin/gabapentin and SNRIs is reasonably well documented and experienced by some experts to result in sufficient pain relief and fewer side effects than monotherapy. Good evidence on efficacy was found for the combination of pregabalin/gabapentin or TCAs and opioids, which was also frequently used in clinical practice. The evidence for combining TCAs and SNRIs is insufficient, although sometimes used in clinical practice despite the risk of serotonin syndrome. For localized NeP, combination therapy with cutaneous patches should be considered. There was insufficient scientific evidence for any pharmacologic combination therapies with selective serotonin reuptake inhibitors – as well as for other potential combinations.Conclusions: The study revealed that combination therapy is widely used in clinical practice and supported by some scientific evidence. However, further studies are needed. Keywords: neuropathic pain, combination therapy, Delphi panel, recommendations, CDC grading system, clinical practice
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- 2017
47. Cranberry juice concentrate does not significantly decrease the incidence of acquired bacteriuria in female hip fracture patients receiving urine catheter: a double-blind randomized trial
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Gunnarsson AK, Gunningberg L, Larsson S, and Jonsson KB
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Urinary tract infection Cranberry Elderly Hip fracture Randomised controlled trial ,Geriatrics ,RC952-954.6 - Abstract
Anna-Karin Gunnarsson,1 Lena Gunningberg,2 Sune Larsson,1 Kenneth B Jonsson1 1Institution of Surgical Sciences, Uppsala University, Uppsala, Sweden; 2Institution of Public Health and Caring Sciences, Uppsala University, Uppsala, Sweden Background: Urinary tract infection (UTI) is a common complication among patients with hip fractures. Receiving an indwelling urinary catheter is a risk factor for developing UTIs. Treatment of symptomatic UTIs with antibiotics is expensive and can result in the development of antimicrobial resistance. Cranberries are thought to prevent UTI. There is no previous research on this potential effect in patients with hip fracture who receive urinary catheters. Aim: The aim of this study is to investigate whether intake of cranberry juice concentrate preoperatively decreases the incidence of postoperative UTIs in hip fracture patients that received a urinary catheter. Design: This study employed a randomized, placebo-controlled double-blind trial. Method: Female patients, aged 60 years and older, with hip fracture (n=227) were randomized to receive cranberry or placebo capsules daily, from admission, until 5 days postoperatively. Urine cultures were obtained at admission, 5 and 14 days postoperatively. In addition, Euro Qual five Dimensions assessments were performed and patients were screened for UTI symptoms. Result: In the intention-to-treat analysis, there was no difference between the groups in the proportion of patients with hospital-acquired postoperative positive urine cultures at any time point. When limiting the analysis to patients that ingested at least 80% of the prescribed capsules, 13 of 33 (39%) in the placebo group and 13 of 47 (28%) in the cranberry group (P=0.270) had a positive urine culture at 5 days postoperatively. However, this difference was not statistically significant (P=0.270). Conclusion: Cranberry concentrate does not seem to effectively prevent UTIs in female patients with hip fracture and indwelling urinary catheter. Keywords: urinary tract infection, elderly, randomized controlled trial, hospital, preventive, urine culture
- Published
- 2017
48. A Meta-Analysis of Math Anxiety Interventions
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Sammallahti, Ellen, Finell, Jonatan, Jonsson, Bert, and Korhonen, Johan
- Abstract
The experience of math anxiety can have detrimental effects on students' math performance, and researchers have in recent years tried to design interventions aiming at reducing math anxiety. This meta-analysis aimed to examine the effectiveness of math anxiety interventions in reducing math anxiety and improving math performance. The meta-analysis comprised 50 studies and included 75 effect sizes. On average, the effect sizes were moderate (g = -0.467) for reducing math anxiety and improving math performance (g = 0.502). Interventions that focused on Cognitive support or regulating Emotions were effective both in reducing math anxiety and improving math performance. In addition, longer interventions and interventions targeting students older than 12 had the biggest decrease in math anxiety. Study quality was not related to intervention outcomes.
- Published
- 2023
49. Interferon subverts an AHR–JUN axis to promote CXCL13+ T cells in lupus
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Law, Calvin, Wacleche, Vanessa Sue, Cao, Ye, Pillai, Arundhati, Sowerby, John, Hancock, Brandon, Horisberger, Alice, Bracero, Sabrina, Skidanova, Viktoriya, Li, Zhihan, Adejoorin, Ifeoluwakiisi, Dillon, Eilish, Benque, Isaac J., Nunez, Diana Pena, Simmons, Daimon P., Keegan, Joshua, Chen, Lin, Baker, Tina, Brohawn, Phillip Z., Al-Mossawi, Hussein, Hao, Ling-Yang, Jones, Brian, Rao, Navin, Qu, Yujie, Alves, Stephen E., Jonsson, A. Helena, Shaw, Katharina S., Vleugels, Ruth Ann, Massarotti, Elena, Costenbader, Karen H., Brenner, Michael B., Lederer, James A., Hultquist, Judd F., Choi, Jaehyuk, and Rao, Deepak A.
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- 2024
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50. Random pure Gaussian states and Hawking radiation
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Aurell, Erik, Hackl, Lucas, Horodecki, Paweł, Jonsson, Robert H., and Kieburg, Mario
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General Relativity and Quantum Cosmology ,Condensed Matter - Statistical Mechanics ,Quantum Physics - Abstract
A black hole evaporates by Hawking radiation. Each mode of that radiation is thermal. If the total state is nevertheless to be pure, modes must be entangled. Estimating the minimum size of this entanglement has been an important outstanding issue. We develop a new theory of constrained random symplectic transformations, based on that the total state is pure and Gaussian with given marginals. In the random constrained symplectic model we then compute the distribution of mode-mode correlations, from which we bound mode-mode entanglement. Modes of frequency much larger than $\frac{k_B T_{H}(t)}{\hbar}$ are not populated at time $t$ and drop out of the analysis.Among the other modes we find that correlations and hence entanglement between relatively thinly populated modes (early-time high-frequency modes and/or late modes of any frequency) to be strongly suppressed. Relatively highly populated modes (early-time low-frequency modes) can on the other hand be strongly correlated, but a detailed analysis reveals that they are nevertheless very unlikely to be entangled. Our analysis hence establishes that restoring unitarity after a complete evaporation of a black hole does not require any significant quantum entanglement between any pair of Hawking modes. Our analysis further gives exact general expressions for the distribution of mode-mode correlations in random, pure, Gaussian states with given marginals, which may have applications beyond black hole physics., Comment: Published version, with supplementary material. Main paper 7 pages, 3 figures. Supplementary material 30 pages, 1 figure
- Published
- 2023
- Full Text
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