23 results on '"Karl-Heinz Rexer"'
Search Results
2. Using a marine microalga as a chassis for polyethylene terephthalate (PET) degradation
- Author
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Daniel Moog, Johanna Schmitt, Jana Senger, Jan Zarzycki, Karl-Heinz Rexer, Uwe Linne, Tobias Erb, and Uwe G. Maier
- Subjects
Polyethylene terephthalate ,PETase ,Plastic pollution ,Plastic degradation ,Diatoms ,Microbiology ,QR1-502 - Abstract
Abstract Background The biological degradation of plastics is a promising method to counter the increasing pollution of our planet with artificial polymers and to develop eco-friendly recycling strategies. Polyethylene terephthalate (PET) is a thermoplast industrially produced from fossil feedstocks since the 1940s, nowadays prevalently used in bottle packaging and textiles. Although established industrial processes for PET recycling exist, large amounts of PET still end up in the environment—a significant portion thereof in the world’s oceans. In 2016, Ideonella sakaiensis, a bacterium possessing the ability to degrade PET and use the degradation products as a sole carbon source for growth, was isolated. I. sakaiensis expresses a key enzyme responsible for the breakdown of PET into monomers: PETase. This hydrolase might possess huge potential for the development of biological PET degradation and recycling processes as well as bioremediation approaches of environmental plastic waste. Results Using the photosynthetic microalga Phaeodactylum tricornutum as a chassis we generated a microbial cell factory capable of producing and secreting an engineered version of PETase into the surrounding culture medium. Initial degradation experiments using culture supernatant at 30 °C showed that PETase possessed activity against PET and the copolymer polyethylene terephthalate glycol (PETG) with an approximately 80-fold higher turnover of low crystallinity PETG compared to bottle PET. Moreover, we show that diatom produced PETase was active against industrially shredded PET in a saltwater-based environment even at mesophilic temperatures (21 °C). The products resulting from the degradation of the PET substrate were mainly terephthalic acid (TPA) and mono(2-hydroxyethyl) terephthalic acid (MHET) estimated to be formed in the micromolar range under the selected reaction conditions. Conclusion We provide a promising and eco-friendly solution for biological decomposition of PET waste in a saltwater-based environment by using a eukaryotic microalga instead of a bacterium as a model system. Our results show that via synthetic biology the diatom P. tricornutum indeed could be converted into a valuable chassis for biological PET degradation. Overall, this proof of principle study demonstrates the potential of the diatom system for future biotechnological applications in biological PET degradation especially for bioremediation approaches of PET polluted seawater.
- Published
- 2019
- Full Text
- View/download PDF
3. Correction to: Using a marine microalga as a chassis for polyethylene terephthalate (PET) degradation
- Author
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Daniel Moog, Johanna Schmitt, Jana Senger, Jan Zarzycki, Karl-Heinz Rexer, Uwe Linne, Tobias J. Erb, and Uwe G. Maier
- Subjects
Microbiology ,QR1-502 - Abstract
The author’s middle name is missed out in the original publication of the article [1]. The correct coauthor’s name is Tobias J. Erb.
- Published
- 2020
- Full Text
- View/download PDF
4. Peptidomics of the agriculturally damaging larval stage of the cabbage root fly Delia radicum (Diptera: Anthomyiidae).
- Author
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Judith Zoephel, Wencke Reiher, Karl-Heinz Rexer, Jörg Kahnt, and Christian Wegener
- Subjects
Medicine ,Science - Abstract
The larvae of the cabbage root fly induce serious damage to cultivated crops of the family Brassicaceae. We here report the biochemical characterisation of neuropeptides from the central nervous system and neurohemal organs, as well as regulatory peptides from enteroendocrine midgut cells of the cabbage maggot. By LC-MALDI-TOF/TOF and chemical labelling with 4-sulfophenyl isothiocyanate, 38 peptides could be identified, representing major insect peptide families: allatostatin A, allatostatin C, FMRFamide-like peptides, kinin, CAPA peptides, pyrokinins, sNPF, myosuppressin, corazonin, SIFamide, sulfakinins, tachykinins, NPLP1-peptides, adipokinetic hormone and CCHamide 1. We also report a new peptide (Yamide) which appears to be homolog to an amidated eclosion hormone-associated peptide in several Drosophila species. Immunocytochemical characterisation of the distribution of several classes of peptide-immunoreactive neurons and enteroendocrine cells shows a very similar but not identical peptide distribution to Drosophila. Since peptides regulate many vital physiological and behavioural processes such as moulting or feeding, our data may initiate the pharmacological testing and development of new specific peptide-based protection methods against the cabbage root fly and its larva.
- Published
- 2012
- Full Text
- View/download PDF
5. Anatomic and neurochemical analysis of the palpal olfactory system in the red flour beetle Tribolium castaneum, HERBST
- Author
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Björn Trebels, Stefan Dippel, Janet Anders, Clara Ernst, Brigitte Goetz, Tim Keyser, Karl Heinz Rexer, Ernst A. Wimmer, and Joachim Schachtner
- Subjects
Cellular and Molecular Neuroscience - Abstract
The paired antennal lobes were long considered the sole primary processing centers of the olfactory pathway in holometabolous insects receiving input from the olfactory sensory neurons of the antennae and mouthparts. In hemimetabolous insects, however, olfactory cues of the antennae and palps are processed separately. For the holometabolous red flour beetle Tribolium castaneum, we could show that primary processing of the palpal and antennal olfactory input also occurs separately and at distinct neuronal centers. While the antennal olfactory sensory neurons project into the antennal lobes, those of the palps project into the paired glomerular lobes and the unpaired gnathal olfactory center. Here we provide an extended analysis of the palpal olfactory pathway by combining scanning electron micrographs with confocal imaging of immunohistochemical staining and reporter expression identifying chemosensory and odorant receptor-expressing neurons in the palpal sensilla. In addition, we extended the anatomical characterization of the gnathal olfactory center by 3D reconstructions and investigated the distribution of several neuromediators. The similarities in the neuromediator repertoire between antennal lobes, glomerular lobes, and gnathal olfactory center underline the role of the latter two as additional primary olfactory processing centers.
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- 2023
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6. A cell surface-exposed protein complex with an essential virulence function in Ustilago maydis
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Carla Gonzalez, Daniela Assmann, Regine Kahmann, Lay-Sun Ma, Kerstin Schipper, Stefanie Reissmann, Karl-Heinz Rexer, Timo Glatter, Marino Moretti, Nicole Ludwig, and Karen M. Snetselaar
- Subjects
0106 biological sciences ,Microbiology (medical) ,Ustilago ,Immunology ,Virulence ,medicine.disease_cause ,Zea mays ,01 natural sciences ,Applied Microbiology and Biotechnology ,Microbiology ,Article ,Fungal Proteins ,03 medical and health sciences ,Gene Expression Regulation, Fungal ,Genetics ,medicine ,Secretion ,Plant Diseases ,030304 developmental biology ,0303 health sciences ,biology ,Effector ,Basidiomycota ,fungi ,food and beverages ,Pathogenic bacteria ,Cell Biology ,Pathogenic fungus ,biology.organism_classification ,Transmembrane protein ,Cell biology ,Effectors in plant pathology ,Membrane protein ,Fungal pathogenesis ,010606 plant biology & botany - Abstract
Plant pathogenic fungi colonizing living plant tissue secrete a cocktail of effector proteins to suppress plant immunity and reprogramme host cells. Although many of these effectors function inside host cells, delivery systems used by pathogenic bacteria to translocate effectors into host cells have not been detected in fungi. Here, we show that five unrelated effectors and two membrane proteins from Ustilago maydis, a biotrophic fungus causing smut disease in corn, form a stable protein complex. All seven genes appear co-regulated and are only expressed during colonization. Single mutants arrest in the epidermal layer, fail to suppress host defence responses and fail to induce non-host resistance, two reactions that likely depend on translocated effectors. The complex is anchored in the fungal membrane, protrudes into host cells and likely contacts channel-forming plant plasma membrane proteins. Constitutive expression of all seven complex members resulted in a surface-exposed form in cultured U. maydis cells. As orthologues of the complex-forming proteins are conserved in smut fungi, the complex may become an interesting fungicide target., This study reports that five effectors and two transmembrane proteins from the plant pathogenic fungus Ustilago maydis form a stable cell surface-exposed protein complex required for virulence.
- Published
- 2021
- Full Text
- View/download PDF
7. Rehydration of dried mushroom specimens with Aerosol® OT for scanning electron microscopy
- Author
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Janina Antonia Koch, Alicia Fischer, Cathrin Manz, and Karl-Heinz Rexer
- Subjects
0106 biological sciences ,03 medical and health sciences ,0302 clinical medicine ,030221 ophthalmology & optometry ,010603 evolutionary biology ,01 natural sciences ,Agricultural and Biological Sciences (miscellaneous) ,Ecology, Evolution, Behavior and Systematics - Abstract
Morphological, anatomical and ultrastructural characteristics are important for taxonomical and phylogenetic studies of fungi. For scanning electron microscopy (SEM), usually only dry voucher specimens are available. For dried plant material, Aerosol® OT (AOT) has been shown to be a suitable rehydration agent for SEM preparation. For swelling and stabilization of fungal cells, however, this simple method does not yield satisfactory results. Here, we show that a combination of AOT with ultrasonic bath and rehydration in a vacuum desiccator is a good method to distend fungal cells like basidiospores and pleuro- and cheilocystidia for SEM analysis. Tissues of several species of Agaricomycetes with diverse morphological structures were exposed to the treatment. Diverse concentrations of AOT as well as treatments in an ultrasonic bath and a vacuum desiccator were tested to optimize the surface reconstruction and to reduce preparation artefacts. The evaluated rehydration method is a cheap, quick and nontoxic method to prepare dried specimens of fungal cells for SEM analysis.
- Published
- 2021
- Full Text
- View/download PDF
8. Rehydration of Dried Mushroom Specimens With Aerosol OT for Scanning Electron Microscopy
- Author
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Karl-Heinz Rexer, Alicia Fischer, Janina Antonia Koch, and Cathrin Manz
- Subjects
Mushroom ,Aerosol OT ,Chromatography ,Scanning electron microscope ,Ultrastructure ,medicine ,Phylogenetic study ,Sem analysis ,Desiccator ,Swelling ,medicine.symptom ,Biology - Abstract
Morphological, anatomical and ultrastructural characteristics are important for taxonomical and phylogenetic studies of fungi. For scanning electron microscopy, usually only dry voucher specimens are available. For dried plant material, Aerosol OT has been shown to be a suitable rehydration agent for SEM preparation. For swelling and stabilization of fungal cells, however, this simple method does not yield satisfactory results. Here, we show that a combination of Aerosol OT with ultrasonic bath and rehydration in a vacuum desiccator is a good method to distend fungal cells like basidiospores, pleuro- and cheilocystidia for SEM analysis. Tissues of several species of Agaricomycetes with diverse morphological structures were exposed to the treatment. Diverse concentrations of Aerosol OT as well as treatments in an ultrasonic bath and a vacuum desiccator were tested to optimize the surface reconstruction and to reduce preparation artefacts. The evaluated rehydration method is a cheap, quick and nontoxic method to prepare dried specimens of fungal cells for SEM analysis.
- Published
- 2021
- Full Text
- View/download PDF
9. The Abl-interactor Abi suppresses the function of the BRAG2 GEF family member Schizo
- Author
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Stefanie, Lübke, Carina, Braukmann, Karl-Heinz, Rexer, Lubjinka, Cigoja, Pratiti, Rout, and Susanne F, Önel
- Abstract
Guanine nucleotide exchange factors (GEF) of the BRAG subfamily activate small Arf GTPases, which are pivotal regulators of intracellular membrane traffic and actin dynamics. Consequently, BRAG proteins have been implicated to regulate the surface levels of adhesive and signaling receptors. However, not much is known about the mechanism leading to the regulation of these surface proteins. In this study we found that the Drosophila BRAG GEF Schizo interacts physically with the Abl-interactor (Abi). schizo mutants display severe defects in myoblast fusion during syncytial muscle formation and show increased amounts of the cell adhesion protein N-cadherin. We demonstrate that the schizo myoblast fusion phenotype can be rescued by the expression of the Schizo GEF (Sec7) and membrane-binding (pleckstrin homology) domain. Furthermore, the expression of the Sec7-PH domain in a wild-type background decreases the amounts of N-cadherin and impairs myoblast fusion. These findings support the notion that the Sec7-PH domain serves as a constitutive-active form of Schizo. Using a yeast-two hybrid assay, we show that the SH3 domain of Abi interacts with the N-terminal region of Schizo. This region is also able to bind to the cytodomain of the cell adhesion molecule N-cadherin. To shed light on the function of Schizo and Abi in N-cadherin removal, we employed epistasis experiments in different developmental contexts of Drosophila. These studies point towards a new model for the regulation of Schizo. We propose that the binding of Abi to the N-terminal part of Schizo antagonizes Schizo function to inhibit N-cadherin removal.
- Published
- 2021
10. The Abl-interactor Abi suppresses the function of the BRAG2 GEF family member Schizo
- Author
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Susanne-Filiz Önel, Stefanie Lübke, Carina Braukmann, Karl-Heinz Rexer, and Lubjinka Cigoja
- Subjects
Pleckstrin homology domain ,ABL ,Subfamily ,Chemistry ,Mutant ,GTPase ,Guanine nucleotide exchange factor ,SH3 domain ,Loss function ,Cell biology - Abstract
Guanine nucleotide exchange factors (GEF) of the BRAG subfamily activate small Arf GTPases, which are pivotal regulators of intracellular membrane traffic and actin dynamics. Here, we demonstrate a novel interaction between the Abl-interactor (Abi) and the BRAG family member Schizo. We mapped the SH3 domain of Abi to interact with the N-terminal region of Schizo. This region is additionally involved in the binding of the cytodomain of the cell adhesion molecule N-cadherin. Inschizoloss of function mutants, we detected increased amounts of N-cadherin. In contrast, the expression of the GEF (Sec7) and the membrane-binding (pleckstrin homology) domains decreased amounts of N-cadherin, indicating a crucial role of the Sec7-PH module in regulating N-cadherin levels. Unlike other Sec7 GEFs, where the catalytic Sec7 domain is autoinhibited, the Sec7 and PH domain of BRAG2 are constitutively accessible, raising the question how GEF activity is controlled in a spatial and temporal manner. Our genetic analyzes demonstrate that the nature of the Abi Schizo interaction is to antagonize Schizo function and to restore wild-type amounts of N-cadherin.
- Published
- 2020
- Full Text
- View/download PDF
11. Correction to: Using a marine microalga as a chassis for polyethylene terephthalate (PET) degradation
- Author
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Uwe G. Maier, Tobias J. Erb, Jan Zarzycki, Daniel Moog, Karl-Heinz Rexer, Jana Senger, Uwe Linne, and Johanna Schmitt
- Subjects
0106 biological sciences ,Materials science ,Chassis ,Hydrolases ,lcsh:QR1-502 ,Marine Biology ,Bioengineering ,01 natural sciences ,Applied Microbiology and Biotechnology ,lcsh:Microbiology ,03 medical and health sciences ,chemistry.chemical_compound ,Bacterial Proteins ,010608 biotechnology ,Microalgae ,Polyethylene terephthalate ,Burkholderiales ,030304 developmental biology ,0303 health sciences ,Polymer science ,Polyethylene Terephthalates ,Correction ,Biodegradation, Environmental ,chemistry ,Degradation (geology) ,Water Microbiology ,Biotechnology - Abstract
The biological degradation of plastics is a promising method to counter the increasing pollution of our planet with artificial polymers and to develop eco-friendly recycling strategies. Polyethylene terephthalate (PET) is a thermoplast industrially produced from fossil feedstocks since the 1940s, nowadays prevalently used in bottle packaging and textiles. Although established industrial processes for PET recycling exist, large amounts of PET still end up in the environment-a significant portion thereof in the world's oceans. In 2016, Ideonella sakaiensis, a bacterium possessing the ability to degrade PET and use the degradation products as a sole carbon source for growth, was isolated. I. sakaiensis expresses a key enzyme responsible for the breakdown of PET into monomers: PETase. This hydrolase might possess huge potential for the development of biological PET degradation and recycling processes as well as bioremediation approaches of environmental plastic waste.Using the photosynthetic microalga Phaeodactylum tricornutum as a chassis we generated a microbial cell factory capable of producing and secreting an engineered version of PETase into the surrounding culture medium. Initial degradation experiments using culture supernatant at 30 °C showed that PETase possessed activity against PET and the copolymer polyethylene terephthalate glycol (PETG) with an approximately 80-fold higher turnover of low crystallinity PETG compared to bottle PET. Moreover, we show that diatom produced PETase was active against industrially shredded PET in a saltwater-based environment even at mesophilic temperatures (21 °C). The products resulting from the degradation of the PET substrate were mainly terephthalic acid (TPA) and mono(2-hydroxyethyl) terephthalic acid (MHET) estimated to be formed in the micromolar range under the selected reaction conditions.We provide a promising and eco-friendly solution for biological decomposition of PET waste in a saltwater-based environment by using a eukaryotic microalga instead of a bacterium as a model system. Our results show that via synthetic biology the diatom P. tricornutum indeed could be converted into a valuable chassis for biological PET degradation. Overall, this proof of principle study demonstrates the potential of the diatom system for future biotechnological applications in biological PET degradation especially for bioremediation approaches of PET polluted seawater.
- Published
- 2020
- Full Text
- View/download PDF
12. MOESM1 of Using a marine microalga as a chassis for polyethylene terephthalate (PET) degradation
- Author
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Moog, Daniel, Schmitt, Johanna, Senger, Jana, Zarzycki, Jan, Karl-Heinz Rexer, Linne, Uwe, Erb, Tobias, and Maier, Uwe
- Abstract
Additional file 1: Figure S1. Secretion analysis of PETase-GFP in P. tricornutum cultures. Figure S2. Coomassie-staining and mass spectrometry analysis of secreted PETase-FLAG in P. tricornutum cultures. Figure S3. Western Blot of a PNGase F treated protein sample (18 µl) of the total precipitated medium fraction. Figure S4. Expression and secretion efficiency analysis of AP_SP-PETaseR280A-FLAG using Western Blot. Figure S5. Scanning electron microscopic analysis of PET bottle film degradation by AP_SP-PETase-FLAG clone 1 (AP_1) secreted from P. tricornutum on a f/2 agar plate for 5 weeks. Figure S6. Scanning electron microscopic image of a P. tricornutum clone AP_SP-PETase-FLAG_1 (AP_1) cell imprint on PET bottle film incubated on a f/2 agar plate for 5 weeks. Figure S7. Scanning electron microscopic analysis of amorphous PETG film degradation by PETase-FLAG tag secreted from P. tricornutum. Figure S8. Scanning electron microscopy and UHPLC analysis of amorphous PETG film treated with 1 ml supernatant of a 500 ml culture of a P. tricornutum clone expressing AP_SP-PETase-FLAG (clone 2). Figure S9. Scanning electron microscopy and UHPLC analysis of PET (bottle) film treated with 1 ml supernatant of a 500 ml culture of a P. tricornutum clone expressing AP_SP-PETase-FLAG (clone 2). Figure S10. UHPLC with 1 ml supernatant of a 500 ml culture of a P. tricornutum clone expressing AP_SP-PETase-FLAG_2 and standard measurements. Figure S11. PET degradation experiment (UHPLC) using shredded PET as a substrate and clone AP_SP-PETase-FLAG_1. Figure S12. Predicted N-glycosylation pattern for AP_SP-PETase-FLAG by NetNGlyc 1.0.
- Published
- 2019
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13. Former Land Use and Host Genotype Influence the Mycorrhizal Colonization of Poplar Roots
- Author
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Karl-Heinz Rexer, Felicia Gherghel, Gerhard Kost, Christina Fey-Wagner, David Behringer, Alwin Janßen, Maren Schlauß, and Stefanie Haubrich
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geography ,geography.geographical_feature_category ,biology ,18S rDNA ,Host (biology) ,arbuscular mycorrhiza ,fungi ,Community structure ,food and beverages ,Forestry ,lcsh:QK900-989 ,biology.organism_classification ,Grassland ,ectomycorrhiza ,Ectomycorrhiza ,Arbuscular mycorrhiza ,Abundance (ecology) ,poplar shoot length ,Botany ,Shoot ,lcsh:Plant ecology ,Colonization ,land use type - Abstract
The present paper analyses the community structure of ectomycorrhiza (ECM) and arbuscular mycorrhiza (AM) fungi associated with seven different poplar clone types growing in a patch system on soil from four different former land use types, originating from spruce forest, poplar stand, grassland and cornfield. We determined the extent to which ECM and AM play a role on the studied factors (genotype, former land use type and host growth). The diversity of ECM and AM fungal communities was estimated by morphological and molecular analyses of the 18S and ITS of the rDNA genes. Fifteen ECM fungal taxa and four AM groups were distinguished in the roots of the poplars grown for 18 months on soil originating from the respective land use types. The poplar clones showed significantly different rates of shoot length and AM colonization, especially concerning the occurrence of Glomus intraradices and Scutellospora sp. Populus deltoides had significantly higher Scutellospora sp. abundance. Although ECM abundance and diversity was high, no significant differences between the different land use types was found. However, some ECM fungi like Paxillus involutus, Laccaria proxima and Laccaria tortilis showed significant preferences for specific land use types. Our findings suggest that both factors, former land use type and poplar genotype, are important determinants of mycorrhizal colonization of the host plants.
- Published
- 2014
14. Additional file 12: Figure S8. of Morphological and Transcriptomic Analysis of a Beetle Chemosensory System Reveals a Gnathal Olfactory Center
- Author
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Dippel, Stefan, Kollmann, Martin, Oberhofer, Georg, Montino, Alice, Knoll, Carolin, Milosz Krala, Karl-Heinz Rexer, Frank, Sergius, Kumpf, Robert, Schachtner, Joachim, and Wimmer, Ernst
- Subjects
fungi - Abstract
Phylogenetic mid-point rooted tree of the GRs based on protein sequences. Outer rings represent the expression in body, mouthparts (T. castaneum: palps, mandible, labrum, and labium; D. melanogaster: palp and proboscis; An. gambiae: maxillary palp) and antenna as a percentage compared to the highest expressed gene according to the scale in the left upper corner. Note that the methods used to obtain the different expression data (RNAseq and microarray) are not directly comparable. This figure can, thus, only give an impression of the tissue-specific abundance of the transcripts. The scale bars within the trees represent 1 amino acid substitution per site. Potential sugar and fructose receptors are labeled and highlighted in yellow and in grey, and CO2 receptors are highlighted in orange. (PDF 1733 kb)
- Published
- 2016
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15. Additional file 9: Figure S5. of Morphological and Transcriptomic Analysis of a Beetle Chemosensory System Reveals a Gnathal Olfactory Center
- Author
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Dippel, Stefan, Kollmann, Martin, Oberhofer, Georg, Montino, Alice, Knoll, Carolin, Milosz Krala, Karl-Heinz Rexer, Frank, Sergius, Kumpf, Robert, Schachtner, Joachim, and Wimmer, Ernst
- Abstract
IR gene tissue expression and chromosomal localization of IR and SNMP genes. a Venn diagram showing the number of IRs expressed (RPKMâ â Ľâ 0.5) in the different body parts: antennae, legs, mouthparts (as a piece of the head capsule anterior of the antennae), heads (the whole head capsule including mouthparts but excluding the antennae), and bodies (excluding head and legs). b Based on Georgia GA-2 strain genome assembly 3 [81], only chromosomal linkage groups containing an IR or SNMP are depicted. Gene clusters are indicated by a number referring to the chromosome and a letter conveys the relative position on the chromosome. The number of genes within this cluster is indicated in square brackets. (PDF 66 kb)
- Published
- 2016
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16. Additional file 16: of Morphological and Transcriptomic Analysis of a Beetle Chemosensory System Reveals a Gnathal Olfactory Center
- Author
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Dippel, Stefan, Kollmann, Martin, Oberhofer, Georg, Montino, Alice, Knoll, Carolin, Milosz Krala, Karl-Heinz Rexer, Frank, Sergius, Kumpf, Robert, Schachtner, Joachim, and Wimmer, Ernst
- Subjects
body regions ,nervous system ,fungi - Abstract
Sequences of primers and template plasmid used to generate pSLfa1180[2.5kbOrcoUp_GAL4delta]. (PDF 111 kb)
- Published
- 2016
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17. Additional file 18: Table S2. of Morphological and Transcriptomic Analysis of a Beetle Chemosensory System Reveals a Gnathal Olfactory Center
- Author
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Dippel, Stefan, Kollmann, Martin, Oberhofer, Georg, Montino, Alice, Knoll, Carolin, Milosz Krala, Karl-Heinz Rexer, Frank, Sergius, Kumpf, Robert, Schachtner, Joachim, and Wimmer, Ernst
- Subjects
body regions ,nervous system ,fungi - Abstract
Primary and secondary antibodies and dyes used with additional information such as source and specificity. n/a not available. (PDF 118 kb)
- Published
- 2016
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18. Colonization of roots of cultivatedSolanum lycopersicumby dark septate and other ascomycetous endophytes
- Author
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María Caridad Cepero de García, Philipp Franken, Eugenia Maximova, Karl-Heinz Rexer, Silvia Restrepo, Diana Rocio Andrade-Linares, Gerhard Kost, and Rita Grosch
- Subjects
Crops, Agricultural ,0106 biological sciences ,Fusarium ,Septate ,Physiology ,Hyphae ,Colombia ,Plant Roots ,01 natural sciences ,Plant use of endophytic fungi in defense ,Conidium ,Ascomycota ,Solanum lycopersicum ,DNA, Ribosomal Spacer ,Botany ,Genetics ,Colonization ,Symbiosis ,Molecular Biology ,Phylogeny ,Ecology, Evolution, Behavior and Systematics ,Mycelium ,Base Sequence ,biology ,fungi ,food and beverages ,Cell Biology ,General Medicine ,Spores, Fungal ,biology.organism_classification ,010602 entomology ,DNA, Intergenic ,Solanum ,010606 plant biology & botany - Abstract
Tomato (Solanum lycopersicum L.) roots from four different crop sites in Colombia were surface sterilized and 51 fungal isolates were obtained and conserved for further analysis. Based on microscopical observations and growth characteristics, 20 fungal isolates corresponded to genus Fusarium, six presented asexual conidia different from Fusarium, eight were sterile mycelia, seven of which had dark septate hyphae and 17 did not continue to grow on plates after being recovered from conservation. Growth on different media, detailed morphological characterization and ITS region sequencing of the six sporulating and eight sterile isolates revealed that they belonged to different orders of Ascomycota and that the sterile dark septate endophytes did not correspond to the well known Phialocephala group. Interactions of nine isolates with tomato plantlets were assessed in vitro. No effect on shoot development was revealed, but three isolates caused brown spots in roots. Colonization patterns as analyzed by confocal microscopy differed among the isolates and ranged from epidermal to cortical penetration. Altogether 11 new isolates from root endophytic fungi were obtained, seven of which showed features of dark septate endophytes. Four known morphotypes were represented by five isolates, while six isolates belonged to five morphotypes of putative new unknown species.
- Published
- 2011
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19. Piriformospora indica, gen. et sp. nov., a new root-colonizing fungus
- Author
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Savita Verma, Ajit Varma, Karl-Heinz Rexer, Annette Hassel, Gerhard Kost, Ashok Sarbhoy, Prakash Bisen, Britta Bütehorn, and Philipp Franken
- Subjects
0106 biological sciences ,0301 basic medicine ,03 medical and health sciences ,Physiology ,Genetics ,Cell Biology ,General Medicine ,030108 mycology & parasitology ,010603 evolutionary biology ,01 natural sciences ,Molecular Biology ,Ecology, Evolution, Behavior and Systematics - Published
- 1998
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20. Peptidomics of the Agriculturally Damaging Larval Stage of the Cabbage Root Fly Delia radicum (Diptera: Anthomyiidae)
- Author
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Jörg Kahnt, Judith Zoephel, Wencke Reiher, Karl-Heinz Rexer, and Christian Wegener
- Subjects
Proteomics ,Anatomy and Physiology ,Peptide Hormones ,lcsh:Medicine ,Enteroendocrine cell ,Plant Roots ,Biochemistry ,Digestive Anatomy ,lcsh:Science ,Neurons ,Liquid Chromatography ,Chromatography ,Multidisciplinary ,biology ,Allatostatin ,Agriculture ,Neurochemistry ,Neurotransmitters ,Chemistry ,Larva ,Insect Proteins ,Drosophila melanogaster ,Sequence Analysis ,Research Article ,animal structures ,Enteroendocrine Cells ,Neuropeptide ,Endocrine System ,Brassica ,Peptide Mapping ,Neurological System ,ddc:570 ,Botany ,Animals ,Pesticides ,Adipokinetic hormone ,Biology ,Diptera ,lcsh:R ,fungi ,Midgut ,Neuroendocrinology ,biology.organism_classification ,Hormones ,Neuroanatomy ,Corazonin ,Small Molecules ,lcsh:Q ,Pest Control ,Digestive System ,Zoology ,Entomology ,Delia radicum ,Neuroscience - Abstract
The larvae of the cabbage root fly induce serious damage to cultivated crops of the family Brassicaceae. We here report the biochemical characterisation of neuropeptides from the central nervous system and neurohemal organs, as well as regulatory peptides from enteroendocrine midgut cells of the cabbage maggot. By LC-MALDI-TOF/TOF and chemical labelling with 4-sulfophenyl isothiocyanate, 38 peptides could be identified, representing major insect peptide families: allatostatin A, allatostatin C, FMRFamide-like peptides, kinin, CAPA peptides, pyrokinins, sNPF, myosuppressin, corazonin, SIFamide, sulfakinins, tachykinins, NPLP1-peptides, adipokinetic hormone and CCHamide 1. We also report a new peptide (Yamide) which appears to be homolog to an amidated eclosion hormone-associated peptide in several Drosophila species. Immunocytochemical characterisation of the distribution of several classes of peptide-immunoreactive neurons and enteroendocrine cells shows a very similar but not identical peptide distribution to Drosophila. Since peptides regulate many vital physiological and behavioural processes such as moulting or feeding, our data may initiate the pharmacological testing and development of new specific peptide-based protection methods against the cabbage root fly and its larva.
- Published
- 2012
- Full Text
- View/download PDF
21. Piriformospora indica, gen. et sp. nov., a New Root-Colonizing Fungus
- Author
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Karl-Heinz Rexer, Prakash S. Bisen, Gerhard Kost, Ashok Sarbhoy, Philipp Franken, Annette Hassel, Savita Verma, Britta Bütehorn, and Ajit Varma
- Subjects
food.ingredient ,biology ,Physiology ,fungi ,Sebacinales ,Basidiomycota ,Cell Biology ,General Medicine ,Fungus ,biology.organism_classification ,complex mixtures ,Spore ,body regions ,Chlamydospore ,food ,Botany ,Genetics ,Piriformospora ,Sebacina ,Serendipita ,Molecular Biology ,Ecology, Evolution, Behavior and Systematics - Abstract
A new fungus isolate was discovered in an arbuscular mycorrhizal fungal spore from a desert soil in India. It could easily be cultivated on various synthetic media, and formed pear-shaped chlamydos...
- Published
- 1998
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- View/download PDF
22. Colonization of roots of cultivated Solanum lycopersicum by dark septate and other ascomycetous endophytes.
- Author
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Andrade-Linares, Diana Rocio, Grosch, Rita, Franken, Philipp, Karl-Heinz-Rexer, Kost, Gerhard, Restrepo, Silvia, Cepero de Garcia, Maria Caridad, and Maximova, Eugenia
- Subjects
TOMATOES ,PLANT roots ,ASCOMYCETES ,ENDOPHYTES ,ENDOPHYTIC fungi - Abstract
Tomato (Solanum lycopersicum L.) roots from four different crop sites in Colombia were surface sterilized and 51 fungal isolates were obtained and conserved for further analysis. Based on microscopical observations and growth characteristics, 20 fungal isolates corresponded to genus Fusarium, six presented asexual conidia different from Fusarium, eight were sterile mycelia, seven of which had dark septate hyphae and 17 did not continue to grow on plates after being recovered from conservation. Growth on different media, detailed morphological characterization and ITS region sequencing of the six sporulating and eight sterile isolates revealed that they belonged to different orders of Ascomycota and that the sterile dark septate endophytes did not correspond to the well known Phialocephala group. Interactions of nine isolates with tomato plantlets were assessed in vitro. No effect on shoot development was revealed, but three isolates caused brown spots in roots. Colonization patterns as analyzed by confocal microscopy differed among the isolates and ranged from epidermal to cortical penetration. Altogether 11 new isolates from root endophytic fungi were obtained, seven of which showed features of dark septate endophytes. Four known morphotypes were represented by five isolates, while six isolates belonged to five morphotypes of putative new unknown species. [ABSTRACT FROM AUTHOR]
- Published
- 2011
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23. Multinucleated smooth muscles and mononucleated as well as multinucleated striated muscles develop during establishment of the male reproductive organs of Drosophila melanogaster
- Author
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Uwe Lammel, Jessica Kuckwa, Renate Renkawitz-Pohl, Karl-Heinz Rexer, Loreen Susic-Jung, and Christina Hornbruch-Freitag
- Subjects
Male ,Organogenesis ,Immunoglobulins ,Muscle Proteins ,Duf ,Genitalia, Male ,Sns ,Muscle Development ,Ejaculatory duct ,DMef2 ,Myoblasts ,medicine ,Melanogaster ,Animals ,Drosophila Proteins ,Myocyte ,Testes ,Molecular Biology ,biology ,Myogenesis ,Metamorphosis, Biological ,Gene Expression Regulation, Developmental ,Membrane Proteins ,Cell Differentiation ,Muscle, Smooth ,Cell Biology ,Anatomy ,biology.organism_classification ,Immunohistochemistry ,Sperm ,Muscle, Striated ,Imaginal disc ,Drosophila melanogaster ,medicine.anatomical_structure ,Microscopy, Electron, Scanning ,Developmental Biology - Abstract
The adult musculature in D. melanogaster forms during metamorphosis. Much is known about the flight and leg musculature, but not about the muscles surrounding the male reproductive tract. The inner genitalia of males consist of the testes, which emerge from the gonads; the remaining genital organs, i.e., paragonia (or accessory glands), ejaculatory duct, sperm pump, and seminal vesicles, develop out of the genital imaginal disc. We analyzed the myoblasts forming the muscle layers of these organs. In myoblasts derived from the genital imaginal disc, the regulatory region of the transcription factor DMef2 is active. DMef2 is also needed for specification and differentiation of embryonic and adult myoblasts. We could discriminate three different muscle types: (i) multinucleated muscles that resemble vertebrate smooth muscles surround the testes, (ii) multinucleated muscles that resemble striated muscles comprises seminal vesicles and the sperm pump, and (iii) mononucleated striated musculature encloses the paragonia and ejaculatory duct. Members of the immunoglobulin superfamily involved in embryonic myogenesis, Dumbfounded (Duf) and Sticks and Stones (Sns), were also expressed in the genital imaginal disc, in the muscle sheath of the testes during muscle differentiation and in the secretory secondary cells, which are part of the binucleated epithelia enclosing the paragonia.
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