43 results on '"Khodabandeh M"'
Search Results
2. Study on hysteresis in perovskite solar cells fabricated using different solvents under ambient conditions
- Author
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Hosseinmardi, A., Moshaii, A., Khodabandeh, M., Bagheri, Z., and Abbasian, S.
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- 2020
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3. A theoretical elucidation of coordination properties of histidine and lysine to Mn2+
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Khodabandeh, M. Hassan, Reisi, Hamid, Zare, Karim, and Zahedi, Mansour
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- 2012
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4. ULTRA-STRUCTURE OF IONOCYTE CELLS IN GILLS OF SILURUS GLANIS OF MAHABAD DAM, KORDESTAN PROVINCE
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S. Khodabandeh; M. Shahriyari moghadam
- Subjects
Gill ,IONOCYTE ,SILURUS GLANIS ,Mahabad ,Iran ,Agriculture ,Aquaculture. Fisheries. Angling ,SH1-691 - Abstract
Gills of catfish Silurus glanis (300g weight) of Mahabad Dam were examined for structural attributes in 2004. Immediately after catch, gills were removed and placed in Bouin and Glutaraldehyde for structural and microscopic examinations. For classical histological assessment, samples were stained with Hematoxylin and Eosin and examined under light microscope. For electron microscopy, cuts 90 nanometers each were prepared and stainted with Uranyl Acetate and Lead Citrate, covered with silver, examined and photographed. We found the gill cells being composed of ionocyte a,b, accessory, mucous, pillar and mosaiccells. The ionocytes were located at the base of the gill rakers and intra-raker spaces. Thesestructural attributes of ionocyte cells demonstrate their active role in osmotic regulation of catfish.
- Published
- 2008
5. Rational design of glycoengineered interferon-β analogs with improved aggregation state: experimental validation
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Samoudi, M., Minuchehr, Z., Harcum, S.W., Tabandeh, F., Omid Yeganeh, N., and Khodabandeh, M.
- Published
- 2017
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6. AMEGAKARYOCYTIC THROMBOCYTOPENIC PURPURA: A FIFTEEN YEAR EXPERIENCE
- Author
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M. Bakhshi, B. Shafayan, and A. Khodabandeh M. Keyhani
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Amegakaryocytic thrombocytopenia ,Medicine (General) ,R5-920 - Abstract
Totally implantable venous access devices (TIVAD) or implantable catheter ports are devices which can be implanted subcutaneously. They enable prolonged and repeated access to the vascular system, into the peritoneal cavity or intravertebral space. This device is particularly useful for repeated medical injection, for blood sampling or transfusion of blood and blood derivatives and for total parenteral nutrition (TPN). Although many patients benefit from the insertion of TIVAD without any secondary effects, any surgical implantation can nevertheless lead to complications. In this study, we investigated the advantages and disadvantages of TIVAD catheter in pediatric age group. A total of 94 cases, 2 to 14 years old, were included in our study. We implanted TIVAD in these patients for chemotherapy in 83 cases (88.29%), for prolonged TPN in 6 cases (6.38%), for corticosteroid and antibiotic therapy after Kasai operation in 2 cases (2.12%), for intermittent IV therapy in 2 cases (2.12%) and for need to partial parenteral nutrition in 1 case (1.06%). Out of 94 cases, 14 cases (15%) had some kind of complications and 80 cases (85%) had no complication. There was no mortality. Most patients and their parents (82 cases, 87.23%) were satisfied from TIVAD. It seems that TIVAD can be a useful device for many chronic patients who need an IV access for multiple injections.
- Published
- 2006
7. Complexation of glycine by manganese (II) in the gas phase: A theoretical study
- Author
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Khodabandeh, M. Hassan, Davari, Mehdi D., Zahedi, Mansour, and Ohanessian, Gilles
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- 2010
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8. Salt weathering and ultrasonic pulse velocity: condition assessment of salt damaged porous limestone
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Rozgonyi-Boissinot, N, primary, Khodabandeh, M A, additional, Besharatinezhad, A, additional, and Török, Á, additional
- Published
- 2021
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9. The Role of Vitamin D in the Age of COVID‐19: A Systematic Review and Meta‐Analysis
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Ghasemian, R, Shamshirian, A, Heydari, K, Malekan, M, Alizadeh‐Navaei, R, Ebrahimzadeh, MA, Ebrahimi Warkiani, M, Jafarpour, H, Razavi Bazaz, S, Shahmirzadi, AR, Khodabandeh, M, Seyfari, B, Motamedzadeh, A, Dadgostar, E, Aalinezhad, M, Sedaghat, M, Razzaghi, N, Zarandi, B, Asadi, A, Naei, VY, Beheshti, R, Hessami, A, Azizi, S, Mohseni, AR, Shamshirian, D, Ghasemian, R, Shamshirian, A, Heydari, K, Malekan, M, Alizadeh‐Navaei, R, Ebrahimzadeh, MA, Ebrahimi Warkiani, M, Jafarpour, H, Razavi Bazaz, S, Shahmirzadi, AR, Khodabandeh, M, Seyfari, B, Motamedzadeh, A, Dadgostar, E, Aalinezhad, M, Sedaghat, M, Razzaghi, N, Zarandi, B, Asadi, A, Naei, VY, Beheshti, R, Hessami, A, Azizi, S, Mohseni, AR, and Shamshirian, D
- Abstract
Background Evidence recommends that vitamin D might be a crucial supportive agent for the immune system, mainly in cytokine response regulation against COVID-19. Hence, we carried out a systematic review and meta-analysis in order to maximise the use of everything that exists about the role of vitamin D in the COVID-19. Methods A systematic search was performed in PubMed, Scopus, Embase and Web of Science up to December 18, 2020. Studies focused on the role of vitamin D in confirmed COVID-19 patients were entered into the systematic review. Results Twenty-three studies containing 11 901 participants entered into the meta-analysis. The meta-analysis indicated that 41% of COVID-19 patients were suffering from vitamin D deficiency (95% CI, 29%-55%), and in 42% of patients, levels of vitamin D were insufficient (95% CI, 24%-63%). The serum 25-hydroxyvitamin D concentration was 20.3 ng/mL among all COVID-19 patients (95% CI, 12.1-19.8). The odds of getting infected with SARS-CoV-2 are 3.3 times higher among individuals with vitamin D deficiency (95% CI, 2.5-4.3). The chance of developing severe COVID-19 is about five times higher in patients with vitamin D deficiency (OR: 5.1, 95% CI, 2.6-10.3). There is no significant association between vitamin D status and higher mortality rates (OR: 1.6, 95% CI, 0.5-4.4). Conclusion This study found that most of the COVID-19 patients were suffering from vitamin D deficiency/insufficiency. Also, there is about three times higher chance of getting infected with SARS-CoV-2 among vitamin-D-deficient individuals and about five times higher probability of developing the severe disease in vitamin-D-deficient patients. Vitamin D deficiency showed no significant association with mortality rates in this population.
- Published
- 2021
10. Response Surface Optimization of the Expression Conditions for Synthetic Human Interferon alpha-2b Gene in Escherichia coli
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Samarin, Z Eslami, primary, Abolghasemi, S, additional, Dehnavi, E, additional, Akbarzadeh, A, additional, Hadian, A, additional, Khodabandeh, M, additional, and Aghaeepoor, M, additional
- Published
- 2018
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11. Response Surface Optimization of the Expression Conditions for Synthetic Human Interferon α-2b Gene in Escherichia coli.
- Author
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SAMARIN, Z. ESLAMI, ABOLGHASEMI, S., DEHNAVI, E., AKBARZADEH, A., HADIAN, A., KHODABANDEH, M., and AGHAEEPOOR, M.
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ESCHERICHIA coli ,GENE expression ,CHEMICAL synthesis ,INTERFERONS ,HEPATITIS - Abstract
Recombinant human interferon α-2b is an FDA-approved drug for monotherapy or in combination therapy with other drugs for hepatitis and cancers. It belongs to a family of homologous proteins involved in antiviral, antiproliferative, and immunoregulatory processes. A different expression system has been used for overexpression of this protein. Escherichia coli expression system is a highly characterized host and various expression settings have been developed based on its properties. However, finding the best conditions for the overexpression of recombinant human interferon α-2b remains to be addressed. In this study, the expression of synthetic human interferon α-2b gene in Escherichia coli was greatly improved by adjusting the expression condition. In this regard, a recombinant gene was designed and codon optimized for the periplasmic expression of this protein. Then, gene subcloning was employed to insert the synthesized gene into the pET22b expression vector. Thereafter, the response surface methodology was employed to design 20 experiments to find out the optimum points for isopropyl β-D-1-thiogalactopyranoside concentration, post-induction period, and the cell density of induction (OD
600 ). The expression fluctuations were assessed by using the real-time polymerase chain reaction method. Our results indicated that the synthetic human interferon α-2b gene was successfully codon optimized and subcloned into the expression vector. The realtime polymerase chain reaction results revealed that the optimum levels of the selected parameters are 0.27 mM for isopropyl β-D-1-thiogalactopyranoside concentration, 7.98 H for the post-induction period, and 3.93 for cell density (OD600 ). These optimized conditions led to a 3.5-fold increase in the rhIFNα2b expression, which is highly promising for large scale rhIFNα2b overexpression. [ABSTRACT FROM AUTHOR]- Published
- 2018
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12. Acute toxicity of virgin and used engine oil enriched with copper nano particles in the earthworm
- Author
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Khodabandeh, M, primary, Koohi, M K, additional, Roshani, A, additional, Shahroziyan, E, additional, Badri, B, additional, Pourfallah, A, additional, Shams, Gh, additional, Hobbenaghi, R, additional, and Sadeghi-Hashjin, G, additional
- Published
- 2011
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13. Growth kinetic parameters and biosynthesis of polyhydroxybutyrate in Cupriavidus necator DSMZ 545 on selected substrates
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Baei, Sharifzadeh, primary, Najafpour, G.D., additional, Younesi, H., additional, Tabandeh, F., additional, Issazadeh, H., additional, and Khodabandeh, M., additional
- Published
- 2011
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14. Cloning and Expression of Influenza Virus A (H1N1) Haemagglutinin large subunit in Escherichia coli
- Author
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Farahmand, B., primary, Khodabandeh, M., additional, Mahboodi, F., additional, Fotouhi, F., additional, Saleh, M., additional, Barkhordari, F., additional, Tabatabaian, M., additional, Torabi, A., additional, and Kheiri, M.T., additional
- Published
- 2010
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15. Trauma care system in Iran.
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Zargar M, Kalantar Motamedi SM, Karbakhsh M, Ghodsi SM, Rahimi-Movaghar V, Panahi F, Saadat S, Khaji A, Davachi SM, Ganji S, Khodabandeh M, Abdollahi Far S, Abdollahi M, Zarei MR, Zargar, Moussa, Kalantar Motamedi, S M R, Karbakhsh, Mojgan, Ghodsi, Seyed-Mohammad, Rahimi-Movaghar, Vafa, and Panahi, Farzad
- Abstract
Objective: The high burden of injuries in Iran necessitates the establishment of a comprehensive trauma care system. The purpose of this paper is to describe the current status of trauma system regarding the components and function.Methods: The current status of trauma system in all components of a trauma system was described through expert panels and semi-structured interviews with trauma specialists and policy makers.Results: Currently, various organizations are involved in prevention, management and rehabilitation of injuries, but an integrative system approach to trauma is rather deficient. There has been ongoing progress in areas of public education through media, traffic regulation reinforcement, hospital care and prehospital services. Meanwhile, there are gaps regarding financing, legislations and education of high risk groups. The issues on education and training standards of the front line medical team and continuing education and evaluation are yet to be addressed. Trauma registry has been piloted in some provinces, but as it needs the well-developed infrastructure (regarding staff, maintenance, financial resources), it is not yet established in our system of trauma care.Conclusions: It seems that one of the problems with trauma care in Iran is lack of coordination among trauma system organizations. Although the clinical management of trauma patients has improved in our country in the recent decade, decreasing the burden of injuries necessitates an organized approach to prevention and management of trauma in the context of a trauma system. [ABSTRACT FROM AUTHOR]- Published
- 2011
16. Isolation, cloning, and sequencing of influenza A (H1N1) hemagglutinin for production of hemagglutinin gene bank.
- Author
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Farahmand, B., Khodabandeh, M., Mahboudi, F., Fotouhi, F., Barkhordari, F., Saleh, M., and Kheiri, T. M.
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INFLUENZA A virus, H1N1 subtype , *HEMAGGLUTININ , *RESPIRATORY infections , *VACCINES , *GENOMES , *COMMUNICABLE diseases , *GLYCOPROTEINS - Abstract
Background: Influenza is a contagious respiratory infectious disease out breaking in cold seasons of the year. The outbreak of the new influenza A (H1N1) virus in 2009 involved large populations of the world with considerable mortality. Hemagglutinin (HA) molecule, the main surface glycoprotein of the influenza virus, is one of the key factors for serological diagnostic kits and vaccine development. Thus establishment of HA gene bank of the circulating influenza viruses is essential in gaining quick access to large amounts of protein. Materials and Methods: The first step in providing such a bank is detection and isolation of HA full genome and its subunits by using specific primers and cloning them in proper vectors. For this purpose, using standard virus genome (A/New Caledonia/20/99(H1N1)) cultured on MDCK cell, HA coding gene was proliferated by RT-PCR using specific primers. Results: Isolation and cloning of the HA gene was verified by RT-PCR, enzyme digestion and determining nucleotide synonymy. Through the use of specific cloning primers, different HA gene constructs were propagated for expression of the gene in insect cells and E.coli bacteria. Conclusion: The results indicated the complete compatibility of the extracted HA gene with the influenza (A/New Caledonia/20/99(H1N1)) hemagglutinin. It makes it possible to use the gene as a source of cloning in a variety of eukaryotic and prokaryotic expression systems. [ABSTRACT FROM AUTHOR]
- Published
- 2010
17. An efficient procedure for purification of recombinant human β heat shock protein 90.
- Author
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Bandehpour, M., Khodabandeh, M., Mosaffa, N., Sharifnia, Z., Ghazanfari, T., and Kazemi, B.
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PROTEINS , *EUKARYOTIC cells , *CYTOPLASM , *SEPHAROSE , *MEDICAL sciences - Abstract
Background and the purpose of the study: Heat Shock Protein 90 (Hsp90) is typically the most abundant chaperone in the eukaryotic cell cytoplasm, and its expression is essential for loading immunogenic peptides onto major histocompatibility complex molecules for presentation to T-cells. Therefore, it may act as a good candidate as an adjuvant molecule in vaccine technology. Methods: Initially the human Hsp90β gene was cloned into the heat inducible expression vector pGP1-2 and then the recombinant protein was isolated by ion exchange chromatography. After intradermal injection of confirmed purified band of protein to rabbits and isolation of the serum IgG antibody, for its affinity purification, the rabbit's purified Hsp90 specific IgG was coupled to the cyanogen bromide-activated Sepharose 4B. Results: The recovery of the purified protein of interest by affinity chromatography was 50%. Conclusion: This research enabled purification of human heat shock protein by a laboratory prepared column chromatography. [ABSTRACT FROM AUTHOR]
- Published
- 2010
18. ATPS as an efficient method for separation of bionanoparticles: Investigation and optimization of partition behavior of pDNA
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Khavarpour, M., Tabandeh, F., Mohsen Jahanshahi, Khodabandeh, M., and Danesh, H. A.
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Aqueous two-phase system ,Plasmid DNA ,Taguchi ,Design of experiments ,nanobioparticles - Abstract
In this paper, the efficiency of an aqueous two-phase system (ATPS) for purification of nanometer-sized bioparticles, plasmid DNA (pDNA), was studied. Polymer-salt ATPS consisting of polyethylenglycol (PEG)-K2HPO4 was used for the purification of 7 kb and 14 kb plasmid vectors. PEG-300 and PEG-1450 were applied to investigate the influence of different molecular mass of PEGon partitioning behavior of pDNA. The Taguchi design of experiments has been applied in order to optimize the significant system characteristics including PEG/salt ratio, temperature, lysate mass fraction and size of plasmid for pDNA separation by using ATPS. The results indicated that PEG/salt ratio has a considerable contribution on pDNA recovery both in the presence of PEG-300 and PEG-1450. It is also obtained that the size of pDNA in the range of 7 kb to 14 kb is not a significant factor on its partitioning. Furthermore, pDNA is easily partitioned to polymer-rich top phase in PEG300/salt system; and in salt-rich bottom phase in PEG1450/salt system. Under optimum conditions, pDNA was extracted in top phase of PEG-300/K2HPO4 with mass percent of 26 : 17 at 25 °C with a recovery percent of 85.
19. Visceral Leishmaniasis (VL) Clinical Presentation, Laboratory Findings, Treatment Options and Outcome.
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Khodabandeh M, Moradian E, Sarvari M, and Khiabani MS
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Background: Black disease, also known as visceral leishmaniasis (VL), is a parasitic illness caused by various Leishmania species. The risk of morbidity and mortality increases with delayed diagnosis and treatment. Early VL diagnosis and fast appropriate treatment are critical issues in endemic areas., Methods: This study was a retrospective cross-sectional study to investigate the diagnostic and therapeutic course of patients admitted with the diagnosis of VL in the Children's Medical Center (CMC) Hospital, Tehran, Iran. All cases of VL in patients under the age of 18 hospitalized between the years 2012 to 2022 were enrolled., Results: Twenty-seven patients were enrolled with an average age of 28.13 months with the majority of females (51.8%). Common clinical signs were fever (96.2%) and splenomegaly (92.59%). However, lymphadenopathy was rare. The largest number of patients was from Tehran Province, followed by Ardabil, Khuzestan, Gilan, and Alborz provinces. The most common hematological abnormalities were anemia (85.1%) and thrombocytopenia (44.4%). In accordance with the treatment strategy, liposomal amphotericin B and amphotericin B deoxycholate were given to 11 and 5 patients, respectively. Eleven of them received glucantime. The average length of hospitalization for liposomal amphotericin B was 15.36 ± 12.49 days. In comparison with glucantime (18.38 ±10.26 days) and amphotericin B deoxycholate (20.20± 6.18 days), liposomal amphotericin B group hospitalization was shorter than others were., Conclusion: VL should be included in the differential diagnosis of any child who presents with fever, splenomegaly, and anemia. Concerning the treatment strategy in this study, liposomal amphotericin B had more efficiency and shorter hospitalization duration., (Copyright©2024 Khodabandeh et al. Published by Tehran University of Medical Sciences.)
- Published
- 2024
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20. Periplaneta americana (Blattodea: Blattidae) fungal pathogens in hospital sewer systems: molecular and phylogenetic approaches.
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Madani M, Safari F, Khodabandeh M, Izadi S, and Zahraei-Ramazani A
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- Animals, Humans, Phylogeny, Fungi genetics, Hospitals, Cockroaches microbiology, Periplaneta microbiology
- Abstract
Cockroaches are known as mechanical vectors of some pathogens that can infect humans. The present study aims to rapidly identify Periplaneta americana fungal pathogens from sewer systems of public hospitals in Esfahan using the polymerase chain reaction (PCR) technique. A total of 55 P. americana cockroaches were randomly collected by direct trapping from sewer systems of seven hospitals and screened for fungal infectious agents using standard morphological methods and the PCR sequencing. From the American cockroach, we isolated 62 yeasts and 31 molds from the surface, hemocoel, and digestive tract of P. americana. Based on DNA sequence comparisons and other taxonomic characteristics, they were identified as more than four species of yeast and four species of mold. Yeast species including Pichia kudriavzevii, Candida glabrata, Pichia kluyveri, and Candida viswanathii, and molds such as Aspergillus niger, Penicillium italicum, Mucor plumbeus, and Rhizopus oryzae were isolated repeatedly from the surface, hemocoel, and digestive tract of P. americana. Our results show that the use of a combination of morphological, molecular techniques, and phylogenetic analysis can lead to the identification of pathogenic fungal agents in American cockroaches and also knowledge of fungal pathogens-arthropod host relationships.
- Published
- 2023
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21. Bioremediation of a salty petrochemical wastewater containing bisphenol A by a novel indigenous Pseudomonas pseudoalcaligenes .
- Author
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Jahanshahi S, Badiefar L, Khodabandeh M, Heidarnia MA, and Yakhchali B
- Abstract
One novel indigenous halotolerant, Pseudomonas sp, with high potential for bisphenol A (BPA) biodegradation was isolated from an outlet of petrochemical wastewater in Iran. The optimal temperature and pH for degradation of BPA by this strain were 30 °C and 7, respectively. This strain was able to decrease COD (chemical oxygen demand) of basal salt medium containing 300 mg L
-1 BPA as sole carbon source and 40 g L-1 NaCl from 655.2 to 109.2 mg L-1 (about 83% decrease) after 36 h. The bacterium degraded 56.3 (19%), 202.43 (67%), 288.86 (96%) and 300 mg L-1 (100%) BPA in basal salt medium containing 300 mg L-1 BPA and 40 g L-1 NaCl within 12, 18, 24 and 36 h, respectively. In addition, this strain could degrade phenol (100 mg L-1 ) and BPA (300 mg L-1 ) in salty petrochemical wastewater within 24 h, completely. In batch fermentation of petrochemical wastewater using this strain higher growth and phenol (100 mg L-1 ), BPA (372 mg L-1 ) removal within 6 h were achieved. High performance liquid chromatography (HPLC) and gas chromatography mass spectrometry (GC/MS) analysis revealed several intermediates during the BPA degradation process. These intermediates were identified as 4-hydroxybenzaldehyde, 4-hydroxyacetophenone, 4-hydroxyphenylacetate, M -hydroxymandelic acid, 2-phenylpropane-1,2-diol, 2-phenyl-2-propanol and lactic acid. The possible BPA-biodegradation pathway based on the identified metabolites and in agreement with recorded pathway in KEGG database was proposed. Preliminary 16S rDNA sequence analysis and subsequent genetically characterization through comprehensive genomic analysis identified the strain as Pseudomonas pseudoalcaligenes strain YKJ., Competing Interests: The authors declare that they have no conflicts of interest., (This journal is © The Royal Society of Chemistry.)- Published
- 2022
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22. Ultrasound-guided 5% dextrose prolotherapy versus corticosteroid injection in carpal tunnel syndrome: a randomized, controlled clinical trial.
- Author
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Babaei-Ghazani A, Moradnia S, Azar M, Forogh B, Ahadi T, Chaibakhsh S, Khodabandeh M, and Eftekharsadat B
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- Adrenal Cortex Hormones therapeutic use, Glucose therapeutic use, Humans, Treatment Outcome, Triamcinolone therapeutic use, Ultrasonography, Interventional, Carpal Tunnel Syndrome diagnostic imaging, Carpal Tunnel Syndrome drug therapy, Prolotherapy
- Abstract
Aim: The main assessment of this study is to analyze the efficiency of ultrasound-guided dextrose prolotherapy against corticosteroid injections for the treatment of carpal tunnel syndrome. Materials & methods: A total of 54 patients with carpal tunnel syndrome were included. Patients who were assigned into the prolotherapy group were injected with 5cc 5% dextrose water under ultrasound guidance. Patients in the corticosteroid group received ultrasound-guided 1 ml triamcinolone 40 mg/ml injection. Results: The inter-group analysis revealed that dextrose prolotherapy has a similar efficacy as corticosteroid for improving pain intensity, functional limitation in daily life, electrophysiologic parameters and ultrasonographic outcomes. No remarkable difference was found between the two treatments until 3 months of follow-up. Conclusion: Dextrose 5% has similar efficacy as triamcinolone for improving pain intensity, functional limitation in daily life, electrophysiologic parameters and ultrasonographic outcomes.
- Published
- 2022
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23. Predictors of survival rate in patients with pancreatic cancer: A multi-center analytical study in Iran.
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Bahardoust M, Abyazi MA, Emami SA, Ghadimi P, Khodabandeh M, Mahmoudi F, Hosseinzadeh R, Heiat M, and Agah S
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- Humans, Iran epidemiology, Lymphatic Metastasis, Middle Aged, Prognosis, Retrospective Studies, Survival Rate, Pancreatic Neoplasms, Lymph Node Excision, Pancreatic Neoplasms pathology, Pancreatic Neoplasms therapy
- Abstract
Background: Pancreatic cancer (PC) is among the deadliest cancers of the gastrointestinal tract worldwide and a growing global health concern., Aim: This study was aimed to evaluate the survival rate and prognostic factors of survival in patients with PC., Methods: In this retrospective cohort study, the records of 556 patients with PC registered in the hospital cancer registration system from September 2007 to September 2020 were evaluated. In this regard, demographic data, tumor characteristics, received treatments, and patients' final status were analyzed. Kaplan-Meier and Cox's regression were used for univariate and multivariate analyses, respectively., Results: The 5-year survival rate was found to be 4.3%. The median survival time was 12.4 ± 6.6 months. Univariate analysis showed that age, BMI (kg/m
2 ), blood transfusions, differentiation, tumor stage, tumor size, number of involved lymph nodes, lymph node ratio (LNR), and type of treatment received were significantly associated with patient survival (p < .05). Multivariate Cox regression indicated that the age ≥60 years [Hazard Ratio (HR) = 1.25, 95% confidence interval (CI) = 1.03-1.49], BMI <18 (kg/m2 ; HR = 1.56, 95% CI = 1.13-2.14), poor differentiation (HR = 2.12, 95% CI = 1.75-2.49), tumor size >2.5 cm (HR = 4.61, 95% CI = 3.30-6.78), metastasis presence (HR = 1.97, 95% CI = 1.49-2.60), more than two involved lymph nodes (HR = 1.52, 95% CI = 1.31-1.77), LNR <0.2 (HR = 0.56, 95% CI = 0.36-0.77), and adjuvant therapy with surgery and chemotherapy (HR = 0.44, 95% CI = 0.28-0.61) are the most important prognostic factors of survival in patients with PC (p < .05)., Conclusions: This study showed that the survival rate of patients with pancreatic cancer varies based on the characteristics of the tumor and the type of treatment received., (© 2021 The Authors. Cancer Reports published by Wiley Periodicals LLC.)- Published
- 2022
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24. Evaluation of iron, ferritin, copper, and ceruloplasmin along with proviral load in human T lymphotropic virus type 1-associated myelopathy.
- Author
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Boostani R, Khodabandeh M, Rezaee SA, Rafatpanah H, Ghezeldasht SA, Vahidi Z, and Baghestani Z
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- Ceruloplasmin, Copper, Cross-Sectional Studies, Ferritins, Humans, Iron, Proviruses genetics, Viral Load, Disabled Persons, HTLV-I Infections diagnosis, Human T-lymphotropic virus 1, Motor Disorders, Paraparesis, Tropical Spastic diagnosis
- Abstract
Human T-cell lymphotropic virus type 1 (HTLV-1) infection can cause HTLV-I-associated myelopathy (HAM). In this study, we evaluated the levels of serum iron, ferritin, copper, and ceruloplasmin, and their correlations with HTLV-1 proviral load (PVL) and standard indices of HAM severity. In total, 114 subjects were recruited in this cross sectional study in Qaem Hospital, Mashhad, Iran between 2017 and 2018, including 36 HAM and 32 asymptomatic cases (ACs) and 46 healthy people (HSs). The clinical examination and evaluation of serum levels of biochemical factors and proviral load were performed. The PVL in HAM and ACs were 1835.49 ± 382.81 and 280.97 ± 67.41 copies/10
4 PBMCs, which statistically differed. Significant differences were also observed in plasma levels of iron, copper, and ceruloplasmin, among the three groups, while ferritin level was not considerably different. For HAM severity, the mean Osame motor disability scale (OMDS) and overactive bladder-validated-8-questionnaire (OABV-8) scores were 4.97 ± 0.38 and 15.75 ± 0.83, respectively, that had no significant correlations with the biochemical variables. Even though the studied elements in HAM group did not affect the severity of the disease, the levels of copper and ceruloplasmin might be determinants of the development and progression of HAM, as they are shown to play role in progression of other neurological diseases., (© 2021. Journal of NeuroVirology, Inc.)- Published
- 2021
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25. Little Hearts Are Affected by COVID19: Importance of the Myocardial Systolic Evaluation.
- Author
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Mamishi S, Zeinaloo A, Haji Esmaeil Memar E, Khodabandeh M, Mirzaaghayan MR, Abdolsalehi MR, Eshaghi H, Gorji M, Ghamari A, and Aghaei Moghadam E
- Abstract
Background: Identifying the cardiac changes could help design measures to recover the cardiovascular system and lessen the mortality and morbidity rate. Accordingly, this cross-sectional study was performed to evaluate the echocardiography indices which are indicators of the cardiac alterations of the children with COVID19 infection. Methods: This study was performed as a cross-sectional study evaluating echocardiography indices in children infected with COVID19. Fifteen children, known cases of the COVID19, and 14 healthy children were enrolled. Evaluated parameters include left ventricle ejection fraction (LVEF), left ventricle end-diastolic diameter (LVED), mitral valve Sa (MV Sa), Tricuspid annular plane systolic excursion (TAPSE), and laboratory parameters. Results: The participants' mean age and weight were 62.8 (±48.0) months and 19.95 (±15.67) kg, respectively. None of the laboratory and echocardiography parameters differed between males and females, between patients with and without positive past medical history, between the patients with and without respiratory tract symptoms, and between patients with and without GI tract symptoms (P.0.05). Patients had significantly higher TAPSE ( p = 0.027), although MV Sa ( p = 0.01) was significantly higher among healthy children. LV EF ( p = 0.425) and LVED diameter ( p = 0.603) were not different significantly. None of the patients had pericardial effusion, pleural effusion, and cardiac tamponade. Conclusion: The heart can be involved during the disease course in children, even at the level of echocardiography indices. This could contribute to a worse prognosis, higher morbidity, and mortality rate, especially in patients with overt myocardial involvement. Non-classic indicators, including LVEF, may not be conclusive for cardiac involvement in non-symptomatic patients., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2021 Mamishi, Zeinaloo, Haji Esmaeil Memar, Khodabandeh, Mirzaaghayan, Abdolsalehi, Eshaghi, Gorji, Ghamari and Aghaei Moghadam.)
- Published
- 2021
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26. StrongestPath: a Cytoscape application for protein-protein interaction analysis.
- Author
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Mousavian Z, Khodabandeh M, Sharifi-Zarchi A, Nadafian A, and Mahmoudi A
- Subjects
- Animals, Mice, Protein Interaction Maps, Proteins genetics, Proteins metabolism
- Abstract
Background: StrongestPath is a Cytoscape 3 application that enables the analysis of interactions between two proteins or groups of proteins in a collection of protein-protein interaction (PPI) network or signaling network databases. When there are different levels of confidence over the interactions, the application is able to process them and identify the cascade of interactions with the highest total confidence score. Given a set of proteins, StrongestPath can extract a set of possible interactions between the input proteins, and expand the network by adding new proteins that have the most interactions with highest total confidence to the current network of proteins. The application can also identify any activating or inhibitory regulatory paths between two distinct sets of transcription factors and target genes. This application can be used on the built-in human and mouse PPI or signaling databases, or any user-provided database for some organism., Results: Our results on 12 signaling pathways from the NetPath database demonstrate that the application can be used for indicating proteins which may play significant roles in a pathway by finding the strongest path(s) in the PPI or signaling network., Conclusion: Easy access to multiple public large databases, generating output in a short time, addressing some key challenges in one platform, and providing a user-friendly graphical interface make StrongestPath an extremely useful application.
- Published
- 2021
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27. Comparing the Severity of Injury and Trauma Pattern between Scooter and Street Motorcycle Riders; a Prospective Cohort Study.
- Author
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Bahardoust M, Karimi Behnagh A, Bagherifard A, Khodabandeh M, Emami SA, Ghasemi Assl S, and Najd Mazhar F
- Abstract
Introduction: The popularity of motorcycle riding in Iran is increasing. However, there is a lack of information about the safety of different motorcycle types. This study aimed to compare the severity of injury and trauma pattern between scooter (vespa) and street (standard) motorcycle riders., Method: In a prospective cohort study, a comparison of demographics, injury severity, trauma pattern, and clinical characteristics between 324 riders (162 Vespa and 162 standard motorcycles) admitted to emergency departments was undertaken. The risk factors associated with severe injuries in the two groups were also determined. An emergency medicine specialist determined the severity of trauma based on the abbreviated injury scale (AIS)., Results: The Odds Ratio (OR) of severe injuries was significantly higher in the standard motorcycle riders' group (OR: 3.09; 95% CI: 1.9-4.21; p: 0.013). The frequency of lower extremity fractures was significantly lower in the Vespa group (OR: 4.11; 95% CI: 2.01-6.25; p = 0.012). The frequency of admission to the intensive care unit was significantly higher in the standard motorbike riders' group (OR: 1.64; 95% CI: 1.11-2.51; p = 0.033). The multivariate analysis indicated that motorcycle type, the speed at the time of the accident, use of helmet, and age of riders are the most important predictors of trauma severity in riders (p<0.05)., Conclusion: The pattern of injury varies between standard and Vespa motorcycles. The standard motorcycle riders were prone to a higher risk of adverse outcomes such as severe injuries. Due to the particular structure of scooters, the rate of lower limb injuries was significantly lower than standard motorcycles., Competing Interests: The authors have no conflicts of interest to declare for this study
- Published
- 2021
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28. Skin reaction to capsaicin in patients with systemic lupus erythematosus compared to healthy controls.
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Sahebari M, Salimi J, Shalchian Tabrizi P, Khodabandeh M, Ariaee Nasab N, and Salari M
- Abstract
Background: The interaction between nervous and immune systems has been under investigation. Transient receptor potential vanilloid type 1(TRPV1) is a ligand gated calcium channel expressed by sensory neurons which mediates neurogenic inflammatory response. Substance p which can be released following exposure to capsaicin is a TRPV1 inducer, shown to have altered concentration and function in mice with systemic lupus erythematosus (SLE). We evaluated skin reaction to capsaicin in newly diagnosed and established SLE patients compared to healthy controls., Methods: Twenty-nine SLE patients (12 newly diagnosed cases under treatment, and 17 established ones, not receiving medications) who referred to rheumatologic disease research center, and 33 healthy subjects of the control group were recruited in this study. A topical solution of capsaicin (0.075%) was applied on the volar forearm during skin test, and time to the tingling sensation, area of induration and area of redness (centimeters
2 ) were recorded after 5, 10, and 20 minutes., Results: The area of redness and area of induration within 15 minutes, time to the tingling sensation (P=0.02), and the overall frequency of tingling sensation (P=0.01) after capsaicin skin test was considerably higher in SLE patients than the healthy controls. Redness, induration and tingling sensation were more frequent but not statistically significant among the established SLE group compared to the newly diagnosed patients., Conclusion: Since skin reaction to capsaicin is more prominent in SLE patients than the healthy individuals, neurogenic inflammation and the role of P substance should be investigated more in ongoing lupus. Capsaicin test can not predict lupus activity., (Copyright © 2020, Babol University of Medical Sciences.)- Published
- 2021
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29. Predictors for the severe coronavirus disease 2019 (COVID-19) infection in patients with underlying liver disease: a retrospective analytical study in Iran.
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Bahardoust M, Heiat M, Khodabandeh M, Karbasi A, Bagheri-Hosseinabadi Z, Ataee MH, Seidalian N, Babazadeh A, Agah S, and Abyazi MA
- Subjects
- Aged, Comorbidity, Female, Humans, Iran epidemiology, Liver Diseases complications, Male, Middle Aged, Retrospective Studies, Risk Factors, Severity of Illness Index, COVID-19 epidemiology, Liver Diseases epidemiology
- Abstract
Risk factors for clinical outcomes of COVID-19 pneumonia have not yet been well established in patients with underlying liver diseases. Our study aimed to describe the clinical characteristics and outcomes of COVID-19 infection among patients with underlying liver diseases and determine the risk factors for severe COVID-19 among them. In a retrospective analytical study, 1002 patients with confirmed COVID-19 pneumonia were divided into two groups: patients with and without underlying liver diseases. The admission period was from 5 March to 14 May 2020. The prevalence of underlying conditions, Demographic data, clinical parameters, laboratory data, and participants' outcomes were evaluated. Logistic regression was used to estimate the predictive factors. Eighty-one (8%) of patients had underlying liver diseases. The frequencies of gastrointestinal symptoms such as diarrhea and vomiting were significantly higher among patients with liver diseases (48% vs. 25% and 46.1% vs. 30% respectively, both P < 0.05). Moreover, ALT and AST were significantly higher among patients with liver diseases (54.5 ± 45.6 vs. 37.1 ± 28.4, P = 0.013 and 41.4 ± 27.2 vs. 29.2 ± 24.3, P = 0.028, respectively). Additionally, the mortality rate was significantly high in patients with liver disease (12.4% vs. 7%, P = 0.018). We also observed that the parameters such as neutrophil to leukocyte ratio [Odds Ratio Adjusted (OR
Adj ) 1.81, 95% CI 1.21-3.11, P = 0.011] and blood group A (ORAdj 1.59, 95% CI 1.15-2.11, P = 0.001) were associated with progression of symptoms of COVID-19. The presence of underlying liver diseases should be considered one of the poor prognostic factors for worse outcomes in patients with COVID-19.- Published
- 2021
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30. Multisystem inflammatory syndrome associated with SARS-CoV-2 infection in 45 children: a first report from Iran.
- Author
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Mamishi S, Movahedi Z, Mohammadi M, Ziaee V, Khodabandeh M, Abdolsalehi MR, Navaeian A, Heydari H, Mahmoudi S, and Pourakbari B
- Subjects
- Adolescent, COVID-19, Child, Child, Preschool, Female, Humans, Infant, Iran epidemiology, Male, Pandemics, Coronavirus Infections complications, Coronavirus Infections epidemiology, Pneumonia, Viral complications, Pneumonia, Viral epidemiology, Systemic Inflammatory Response Syndrome complications
- Abstract
During the coronavirus disease 2019 (COVID-19) pandemic, a new phenomenon manifesting as a multisystem inflammatory syndrome in children (MIS-C) which has a similar clinical presentation to Kawasaki disease, toxic shock syndrome and severe sepsis has emerged. Although the number of MIS-C reports is increasing, rare reports in Asia is still available. To our knowledge, this study is the largest series of published MIS-C cases in Iran. We performed a retrospective study of all patients with case definition for MIS-C admitted to the three paediatric hospitals in Iran. All of these hospitals are located within the most active COVID-19 pandemic areas (Tehran, Qom and Mazandaran) in Iran. Demographic characteristics, clinical data, laboratory findings, imaging and echocardiographic findings, treatment and outcomes were collected. Between 7 March and 23 June 2020, 45 children were included in the study. The median age of children was 7 years (range between 10 months and 17 years). Common presenting symptoms include fever (91%), abdominal pain (58%), nausea/vomiting (51%), mucocutaneous rash (53%), conjunctivitis (51%) and hands and feet oedema (40%) with median duration of symptoms prior to presentation of 5 (interquartile range (IQR) 3, 7) days. Fifty-three percent of children showed lymphopaenia. Overall, the majority of cases at admission had markedly elevated inflammatory markers erythrocyte sedimentation rate (ESR) (95.5%) and C-reactive protein (CRP) (97%). Ferritin was abnormal in 11 out of 14 tested patients (73%), and it was highly elevated (>500 ng/ml) in 47% of cases. Median fibrinogen level was 210 (IQR 165, 291) mg/dl, D-dimer was 3909 (IQR 848, 4528) ng/ml and troponin was 0.6 (IQR 0.1, 26) ng/ml, respectively. Twenty out of 31 patients (64.5%) had hypoalbuminaemia. In addition, hyponatraemia was found in 64% of cases. Twenty-five patients (56%) presented with cardiac involvement and acute renal failure was observed in 13 cases (29%). Pleural, ascitic, ileitis and pericardial effusions were found in 18%, 11%, 4% and 2% of cases, respectively. In conclusion, this is a first large case series of hospitalised children who met criteria for MIS-C in Iran. There was a wide spectrum of presenting signs and symptoms; evidence of inflammation with abnormal values of CRP, ESR, D-dimer, ferritin and albumin; and multi-organ involvement.
- Published
- 2020
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31. Study on Periplaneta americana (Blattodea: Blattidae) Fungal Infections in Hospital Sewer System, Esfahan City, Iran, 2017.
- Author
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Khodabandeh M, Shirani-Bidabadi L, Madani M, and Zahraei-Ramazani A
- Abstract
Background: American cockroaches contaminated with pathogens inside hospital manholes can be one of the major problems that health care systems face., Objectives: The aim of this study was to investigate the fungal infections of American cockroaches in the Esfahan hospital sewage network. The principle goal of the study was about the roaches as a vector of fungi and other pathogens., Method: The type of study was descriptive-analytical. A total of 55 American cockroach specimens from the manhole walls of the sewerage system of 7 large hospitals were captured. Samples were taken from the surface of the body, digestive tract, and haemocoel of cockroaches. The specimens were then cultured on Sabouraud dextrose agar separately, and fungi were identified according to the macroscopic and microscopic characteristics., Results: All cockroaches collected from hospitals were infected with fungi. Among the 24 (13 infected and 11 noninfected) (44%) female cockroaches and 31 (18 infected and 13 noninfected) (56%) male cockroaches, it was identified that 40.00% was infected with Aspergillus niger , 3.64% with Rhizopus , 7.27% with Penicillium , and 5.45% with Mucor . 6 cockroaches had no yeast contamination. 17 (30.91%) cockroaches were contaminated with Candida glabrata , 23 (41.82%) cockroaches were contaminated with Candida krusei , and 22 (40%) cockroaches were contaminated with other yeast species. The results of this study showed that Candida krusei had the highest prevalence among the isolated fungi with 35.37% of the digestive system and Aspergillus niger with 70.97% of the surface of the cockroach body., Conclusion: The results emphasized the role played by cockroaches as potential pathogenic vectors in hospital environments. Therefore, suitable management is needed for controlling this insect to prevent disease transmission in hospitals., Competing Interests: The authors declare that they have no conflicts of interest., (Copyright © 2020 Maryam Khodabandeh et al.)
- Published
- 2020
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32. Disseminated Leishmaniasis Due to Using Immunosuppression Drugs: A Case Report.
- Author
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Afshoon M, Abdolsalehi M, Alinia G, Borhani K, Yaghmaie B, and Khodabandeh M
- Abstract
Visceral leishmaniasis is a common parasitic disease between humans and animals, transmitted by sandflies ( Phlebotomus ) in the Mediterranean countries, including Iran. The statistics have been reported less than real due to errors in the diagnosis and reporting of affected cases. In this report, we will present the symptoms and manifestations of this disease to reduce late detection and exacerbating factors. The patient was a three-year-old girl from Tehran, Iran who had ascites and hepatomegaly. When she was 9 month-old, she was diagnosed as autoimmune hepatitis after liver biopsy and she was treated with immunosuppressive drugs (Azathioprine, prednisolone, and cyclosporine) for 22 months, but later she suffered from fever, pancytopenia, and hepatosplenomegaly. Then a bone marrow biopsy was done for her. There was a large amount of Leishman body in her bone marrow and treatment for Kala-azar was started for her. In patients with prolonged fever and splenomegaly, especially association with pancytopenia, consider leishmaniasis. Immunosuppressive drugs can disseminate parasitic diseases, including visceral leishmaniasis., Competing Interests: Conflict of interest The authors declare that there is no conflict of interest., (Copyright© Iranian Society of Parasitology & Tehran University of Medical Sciences.)
- Published
- 2020
33. Health Education Serious Games Targeting Health Care Providers, Patients, and Public Health Users: Scoping Review.
- Author
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Sharifzadeh N, Kharrazi H, Nazari E, Tabesh H, Edalati Khodabandeh M, Heidari S, and Tara M
- Abstract
Background: Serious educational games have shown effectiveness in improving various health outcomes. Previous reviews of health education games have focused on specific diseases, certain medical subjects, fixed target groups, or limited outcomes of interest. Given the recent surge in health game studies, a scoping review of health education games is needed to provide an updated overview of various aspects of such serious games., Objective: This study aimed to conduct a scoping review of the design and evaluation of serious educational games for health targeting health care providers, patients, and public (health) users., Methods: We identified 2313 studies using a unique combination of keywords in the PubMed and ScienceDirect databases. A total of 161 studies were included in this review after removing duplicates (n=55) and excluding studies not meeting our inclusion criteria (1917 based on title and abstract and 180 after reviewing the full text). The results were stratified based on games targeting health care providers, patients, and public users., Results: Most health education games were developed and evaluated in America (82/161, 50.9%) and Europe (64/161, 39.8%), with a considerable number of studies published after 2012. We discovered 58.4% (94/161) of studies aiming to improve knowledge learning and 41.6% (67/161) to enhance skill development. The studies targeted various categories of end users: health care providers (42/161, 26.1%), patients (38/161, 23.6%), public users (75/161, 46.6%), and a mix of users (6/161, 3.7%). Among games targeting patients, only 13% (6/44) targeted a specific disease, whereas a growing majority targeted lifestyle behaviors, social interactions, cognition, and generic health issues (eg, safety and nutrition). Among 101 studies reporting gameplay specifications, the most common gameplay duration was 30 to 45 min. Of the 61 studies reporting game repetition, only 14% (9/61) of the games allowed the users to play the game with unlimited repetitions. From 32 studies that measured follow-up duration after the game intervention, only 1 study reported a 2-year postintervention follow-up. More than 57.7% (93/161) of the games did not have a multidisciplinary team to design, develop, or assess the game., Conclusions: Serious games are increasingly used for health education targeting a variety of end users. This study offers an updated scoping review of the studies assessing the value of serious games in improving health education. The results showed a promising trend in diversifying the application of health education games that go beyond a specific medical condition. However, our findings indicate the need for health education game development and adoption in developing countries and the need to focus on multidisciplinary teamwork in designing effective health education games. Furthermore, future health games should expand the duration and repetition of games and increase the length of the follow-up assessments to provide evidence on long-term effectiveness., (©Nahid Sharifzadeh, Hadi Kharrazi, Elham Nazari, Hamed Tabesh, Maryam Edalati Khodabandeh, Somayeh Heidari, Mahmood Tara. Originally published in JMIR Serious Games (http://games.jmir.org), 05.03.2020.)
- Published
- 2020
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34. A follow-up study on Guillain-Barre syndrome and validation of Brighton criteria.
- Author
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Boostani R, Ramezanzadeh F, Saeidi M, and Khodabandeh M
- Abstract
Background: Guillain-Barre syndrome (GBS) is the major cause of acute flaccid paralysis (AFP). Comprehensive classification and predictive measures need to be created for GBS. This study was conducted to evaluate GBS patients' prognosis and Brighton criteria validity in Iranian population. Methods: This retrospective cohort study was conducted using medical records of patients with GBS admitted to Ghaem Hospital, Mashhad, Iran. After collecting data from cerebrospinal fluid (CSF) analysis, nerve conduction studies, and clinical examinations, Brighton criteria and GBS disability scores were calculated. Patients ultimately received follow-up telephone calls after 15 to 45 months of admission, checking on one's clinical status and the ability to walk independently. Data were analyzed using SPSS software. Results: Patients were mostly men (78.0%) with the mean age of 48.58 years. GBS onset was reported more frequently in spring. According to Brighton criteria, 41.4%, 51.6%, and 7.0% of the patients were classified as levels 1, 2, and 4, respectively. For GBS disability score, 54.7%, 16.4%, 9.4%, and 6.2% of the patients had grades of 4, 3, 2, and 1, respectively. 37 patients (39.4%) restored the ability to walk within the first month, while 3 patients (3.2%) were unable to walk by the end of the second year. Significant relationship was observed between the ability of walking independently and GBS disability score (P < 0.001). Conclusion: In the Iranian GBS population, less than half of the patients met level 1 of Brighton criteria and more than half of them reached the GBS disability score of 4, and walking ability was correlated to GBS disability score., (Copyright © 2015 Iranian Neurological Association, and Tehran University of Medical Sciences.)
- Published
- 2019
35. Analysis of Resistance to Macrolide-Lincosamide-Streptogramin B Among mecA -Positive Staphylococcus Aureus Isolates.
- Author
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Khodabandeh M, Mohammadi M, Abdolsalehi MR, Alvandimanesh A, Gholami M, Bibalan MH, Pournajaf A, Kafshgari R, and Rajabnia R
- Abstract
Objectives: Genetic determinants conferring resistance to macrolide, lincosamide, and streptogramin B (MLS
B ) via ribosomal modification such as, erm , msrA/B and ereA/B genes are distributed in bacteria. The main goals of this work were to evaluate the dissemination of MLSB resistance phenotypes and genotypes in methicillin-resistant Staphylococcus aureus (MRSA) isolates collected from clinical samples., Methods: A total of 106 MRSA isolates were studied. Isolates were recovered from 3 hospitals in Tehran between May 2016 to July 2017. The prevalence of MLSB -resistant strains were determined by D-test, and then M-PCR was performed to identify genes encoding resistance to macrolides, lincosamides, and streptogramins in the tested isolates., Results: The frequency of constitutive resistance MLSB , inducible resistance MLSB and MSB resistance were 56.2%, 22.9%, and 16.6%, respectively. Of 11 isolates with the inducible resistance MLSB phenotype, ermC , ermB , ermA and ereA were positive in 81.8%, 63.6%, 54.5% and 18.2% of these isolates, respectively. In isolates with the constitutive resistance MLSB phenotype, the prevalence of ermA , ermB , ermC , msrA , msrB , ereA and ereB were 25.9%, 18.5%, 44.4%, 0.0%, 0.0%, 11.1% and 0.0%, respectively., Conclusion: Clindamycin is commonly administered in severe MRSA infections depending upon the antimicrobial susceptibility findings. This study showed that the D-test should be used as an obligatory method in routine disk diffusion assay to detect inducible clindamycin resistance in MRSA so that effective antibiotic treatment can be provided., Competing Interests: Conflicts of Interest The authors declare that they have no conflicts of interest.- Published
- 2019
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36. Grisel's syndrome associated with tonsillitis.
- Author
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Khodabandeh M, Shakiba S, Alizadeh S, and Eshaghi H
- Abstract
Non-traumatic subluxation of atlanto-axial joint known as Grisel's syndrome is a rare condition. The pathogenesis of Grisel syndrome in not clear but it seems laxity of cervical ligaments in children and an inflammatory process in neck might cause the syndrome. Here we present a case of Grisel's syndrome, a 9 -year- old boy presented with torticollis and discuss about clinical radiological and treatment aspects of the syndrome.
- Published
- 2018
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37. Determination of Helicobacter pylori virulence-associated genes in duodenal ulcer and gastric biopsies.
- Author
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Saeidi Y, Pournajaf A, Gholami M, Hasannejad-Bibalan M, Yaghoubi S, Khodabandeh M, Emadi B, Ferdosi-Shahandashti E, and Rajabnia R
- Abstract
Background: Helicobacter pylori (H. pylori or Hp) has been strongly associated with the peptic ulcer diseases, chronic gastritis, ulcers, and gastric cancer. Genes associated with pathogenicity have been designated for H. pylori , and some of them appear to be related to more severe clinical consequences of the infection. The present study was conducted to determine cagA, vacA, cagE, iceA1, oipA, and iceA2 genes in H. pylori strains isolated from gastroduodenal patients, who referred to Shariati hospital in Tehran, Iran. Methods: Gastric biopsy specimens were collected during endoscopy from patients, who referred to the Shariati hospital in Tehran, Iran during January and November 2015. After isolation of H. pylori from the biopsy culture, genomic DNA was extracted and subsequently used to identify H. pylori and virulence genes using specific primers. Results: The isolation rate of H. pylori strains was 65.7% (169/257). The frequency of cagA, vacA, cagE, iceA1, oipA, and iceA2 was 143 (% 84.6), 169 (100%), 131 (77.5%), 97 (57.3%), 89 (52.6%), and 72 (42.6%), respectively. Conclusion: In this study, a significant difference was observed between investigated genes and strains isolated from PUD and GC patients (p<0.05).
- Published
- 2017
38. Metabolic syndrome in lupus patients in northeast of Iran, and their lifestyle habits.
- Author
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Hatef-Fard MR, Khodabandeh M, Sahebari M, Ghayour-Mobarhan M, and Rezaieyazdi Z
- Abstract
Background: Systemic lupus erythematous is an autoimmune disease associated with atherosclerotic manifestations or metabolic disturbance due to inflammation. The aim of this study was to determine frequency of metabolic syndrome (MetS) in SLE compared to healthy controls., Methods: In this cross-sectional study, 150 SLE patients and 220 healthy volunteers were enrolled. MetS was diagnosed according to ATPIII criteria. Patients and controls were compared according to prevalence of MetS. In addition, SLE patients with and without MetS were compared according to laboratory parameters. Each patient also fulfilled a checklist about routine daily activities and diet program. Data were analyzed by SPSS-11 software., Results: MetS was significantly lower in SLE than healthy controls (18% vs 29.1%, P=0.015). Disease manifestations, major organ involvement, serum values of complements and anti-DNA antibody and pharmacological therapy did not correlate with MetS occurrence in patients. The mean TG, FBS, systolic and diastolic BP were statistically higher in lupus patients compared to healthy volunteers in contrast to waist circumference. HDL-cholesterol serum values did not show any significant difference between two groups., Conclusion: It seems that despite higher values of blood pressure, serum lipids and glucose in lupus patients, the cumulative metabolic components were in a manner to make MetS more prevalent in healthy volunteers. As far as life habits are concerned, lupus patients in general did not exercise enough and did not go on a healthy diet despite of glucocorticoid therapy and hypertension.
- Published
- 2016
39. Rational design of hyper-glycosylated interferon beta analogs: a computational strategy for glycoengineering.
- Author
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Samoudi M, Tabandeh F, Minuchehr Z, Ahangari Cohan R, Nouri Inanlou D, Khodabandeh M, and Sabery Anvar M
- Subjects
- Amino Acid Sequence, Animals, Glycosylation, Humans, Molecular Dynamics Simulation, Molecular Sequence Data, Protein Stability, Protein Structure, Secondary, Protein Structure, Tertiary, Sequence Alignment, Sequence Homology, Amino Acid, Structural Homology, Protein, Thermodynamics, Interferon-beta chemistry, Protein Engineering, Sialic Acids chemistry
- Abstract
Glycoengineering has been successfully used to improve the physicochemical and pharmaceutical properties of therapeutics. One aspect of glycoengineering is to introduce new N-linked glycosylation consensus sequences (Asn, X, Thr/Ser) into desirable positions in the peptide backbone by mutational insertion to generate proteins with increased sialic acid content. In the current work, human interferon beta (huIFN-β) was used as a model to identify the potential positions for the addition of new N-glycosylation sites. A computational strategy was employed to predict the structural distortions and functional alterations that might be caused by the change in amino acid sequence. Accordingly, three-dimensional (3D) structures of the designed huIFN-β analogs were generated by comparative modeling. Molecular dynamics (MD) simulation was carried out to assess the molecular stability and flexibility profile of the structures. Subsequently, for the purpose of glycoengineering huIFN-β, analogs with 3D structures more similar to the wild-type huIFN-β and exposed Asn residue in the new N-glycosylation site were identified. These modeling procedures indicated that the addition of the new N-glycosylation site in the loop regions had lower constraining effects on the tertiary structure of the protein. This computational strategy can be applied to avoid alterations in the 3D structure of proteins caused by changes in the amino acid sequences, when designing novel hyper-glycosylated therapeutics. This in turn reduces labor-intensive experimental analyses of each analog., (Copyright © 2014 Elsevier Inc. All rights reserved.)
- Published
- 2015
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40. PCR-based identification of methicillin-resistant Staphylococcus aureus strains and their antibiotic resistance profiles.
- Author
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Pournajaf A, Ardebili A, Goudarzi L, Khodabandeh M, Narimani T, and Abbaszadeh H
- Abstract
Objective: To evaluated the PCR for mecA gene compared with the conventional oxacillin disk diffusion method for methicillin-resistant Staphylococcus aureus (S. aureus) identification., Methods: A total of 292 S. aureus strains were isolated from various clinical specimens obtained from hospitalized patients. Susceptibility test to several antimicrobial agents was performed by disk diffusion agar according to Clinical and Laboratory Standards Institute guidelines. The PCR amplification of the mecA gene was carried out in all the clinical isolates., Results: Among antibiotics used in our study, penicillin showed the least anti-staphylococcal activity and vancomycin was the most effective. The rate of methicillin-resistant S. aureus prevalence determined by oxacillin disk diffusion method was 47.6%; whereas, 45.1% of S. aureus isolates were mecA- positive in the PCR assay., Conclusions: This study is suggestive that the PCR for detection of mecA gene is a fast, accurate and valuable diagnostic tool, particularly in hospitals in areas where methicillin-resistant S. aureus is endemic.
- Published
- 2014
- Full Text
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41. Cloning and Expression of Gumboro VP2 Antigen in Aspergillus niger.
- Author
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Azizi M, Yakhchali B, Ghamarian A, Enayati S, Khodabandeh M, and Khalaj V
- Abstract
Background: Infectious Bursal Disease Virus (IBDV) causes a highly immunosuppressive disease in chickens and is a pathogen of major economic importance to the poultry industry worldwide. The VP2 protein is the major host-protective immunogen of IBDV and has been considered as a potential subunit vaccine against the disease. VP2 coding sequence was cloned in an inducible fungal vector and the protein was expressed in Aspergillus niger (A. niger)., Methods: Aiming at a high level of expression, a multicopy AMA1-pyrG-based episomal construct driven by a strong inducible promoter, glaA, was prepared and used in transformation of A. niger pyrG-protoplasts. SDS-PAGE and western blot analysis was carried out to confirm the expression of the protein., Results: A number of pyrG (+) positive transformants were isolated and the presence of expression cassette was confirmed. Western blot analysis of one of these recombinant strains using monospecific anti-VP2 antibodies demonstrated the successful expression of the protein. The recombinant protein was also detected by serum obtained from immunized chicken., Conclusion: In the present study, we have generated a recombinant A. niger strain expressing VP2 protein intracellulary. This recombinant strain of A. niger may have potential applications in oral vaccination against IBDV in poultry industry.
- Published
- 2013
42. An efficient procedure for purification of recombinant human β heat shock protein 90.
- Author
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Bandehpour M, Khodabandeh M, Mosaffa N, Sharifnia Z, Ghazanfari T, and Kazemi B
- Abstract
Background and the Purpose of the Study: Heat Shock Protein 90 (Hsp90) is typically the most abundant chaperone in the eukaryotic cell cytoplasm, and its expression is essential for loading immunogenic peptides onto major histocompatibility complex molecules for presentation to T-cells. Therefore, it may act as a good candidate as an adjuvant molecule in vaccine technology., Methods: Initially the human Hsp90β gene was cloned into the heat inducible expression vector pGP1-2 and then the recombinant protein was isolated by ion exchange chromatography. After intradermal injection of confirmed purified band of protein to rabbits and isolation of the serum IgG antibody, for its affinity purification, the rabbit's purified Hsp90 specific IgG was coupled to the cyanogen bromide-activated Sepharose 4B., Results: The recovery of the purified protein of interest by affinity chromatography was 50%., Conclusion: This research enabled purification of human heat shock protein by a laboratory prepared column chromatography.
- Published
- 2010
43. Heat-induced production of human growth hormone by high cell density cultivation of recombinant Escherichia coli.
- Author
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Tabandeh F, Shojaosadati SA, Zomorodipour A, Khodabandeh M, Sanati MH, and Yakhchali B
- Subjects
- Cell Division physiology, Cell Division radiation effects, Cloning, Molecular, Colony Count, Microbial, Dose-Response Relationship, Radiation, Escherichia coli radiation effects, Gene Transfer Techniques, Glucose metabolism, Glycerol metabolism, Human Growth Hormone genetics, Humans, Radiation Dosage, Recombinant Proteins biosynthesis, Bioreactors microbiology, Cell Culture Techniques methods, Escherichia coli growth & development, Escherichia coli metabolism, Heat-Shock Response physiology, Hot Temperature, Human Growth Hormone biosynthesis, Protein Engineering methods
- Abstract
The temperature-induced, over-expression of the human growth hormone gene in a recombinant E. coli during high cell density cultivation is reported. Human growth hormone (hGH) production and stability were tested under different heat shock conditions. Cell densities were 25 and 60 g l(-1) in a pH-stat fed-batch mode in defined and complex medium, respectively, and the fermentation time was decreased from 41 to 32 h. hGH was produced at 2 g l(-1) in complex medium. By using glycerol as main carbon source in the complex medium with exponential feeding, cell density and hGH production were increased to 100 g l(-1) and 2.7 g l(-1), respectively.
- Published
- 2004
- Full Text
- View/download PDF
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