64 results on '"Lassi Rieppo"'
Search Results
2. Preclassification of Broadband and Sparse Infrared Data by Multiplicative Signal Correction Approach
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Hafeez Ur Rehman, Valeria Tafintseva, Boris Zimmermann, Johanne Heitmann Solheim, Vesa Virtanen, Rubina Shaikh, Ervin Nippolainen, Isaac Afara, Simo Saarakkala, Lassi Rieppo, Patrick Krebs, Polina Fomina, Boris Mizaikoff, and Achim Kohler
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water spectrum ,sparse spectra ,quality spectra ,spectral preclassification ,PCA ,quantum cascade lasers ,Organic chemistry ,QD241-441 - Abstract
Preclassification of raw infrared spectra has often been neglected in scientific literature. Separating spectra of low spectral quality, due to low signal-to-noise ratio, presence of artifacts, and low analyte presence, is crucial for accurate model development. Furthermore, it is very important for sparse data, where it becomes challenging to visually inspect spectra of different natures. Hence, a preclassification approach to separate infrared spectra for sparse data is needed. In this study, we propose a preclassification approach based on Multiplicative Signal Correction (MSC). The MSC approach was applied on human and the bovine knee cartilage broadband Fourier Transform Infrared (FTIR) spectra and on a sparse data subset comprising of only seven wavelengths. The goal of the preclassification was to separate spectra with analyte-rich signals (i.e., cartilage) from spectra with analyte-poor (and high-matrix) signals (i.e., water). The human datasets 1 and 2 contained 814 and 815 spectra, while the bovine dataset contained 396 spectra. A pure water spectrum was used as a reference spectrum in the MSC approach. A threshold for the root mean square error (RMSE) was used to separate cartilage from water spectra for broadband and the sparse spectral data. Additionally, standard noise-to-ratio and principle component analysis were applied on broadband spectra. The fully automated MSC preclassification approach, using water as reference spectrum, performed as well as the manual visual inspection. Moreover, it enabled not only separation of cartilage from water spectra in broadband spectral datasets, but also in sparse datasets where manual visual inspection cannot be applied.
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- 2022
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3. Preprocessing Strategies for Sparse Infrared Spectroscopy: A Case Study on Cartilage Diagnostics
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Valeria Tafintseva, Tiril Aurora Lintvedt, Johanne Heitmann Solheim, Boris Zimmermann, Hafeez Ur Rehman, Vesa Virtanen, Rubina Shaikh, Ervin Nippolainen, Isaac Afara, Simo Saarakkala, Lassi Rieppo, Patrick Krebs, Polina Fomina, Boris Mizaikoff, and Achim Kohler
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preprocessing ,sparse spectra ,multiplicative signal correction ,quantum cascade lasers ,Organic chemistry ,QD241-441 - Abstract
The aim of the study was to optimize preprocessing of sparse infrared spectral data. The sparse data were obtained by reducing broadband Fourier transform infrared attenuated total reflectance spectra of bovine and human cartilage, as well as of simulated spectral data, comprising several thousand spectral variables into datasets comprising only seven spectral variables. Different preprocessing approaches were compared, including simple baseline correction and normalization procedures, and model-based preprocessing, such as multiplicative signal correction (MSC). The optimal preprocessing was selected based on the quality of classification models established by partial least squares discriminant analysis for discriminating healthy and damaged cartilage samples. The best results for the sparse data were obtained by preprocessing using a baseline offset correction at 1800 cm−1, followed by peak normalization at 850 cm−1 and preprocessing by MSC.
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- 2022
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4. Histochemical quantification of collagen content in articular cartilage.
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Lassi Rieppo, Lauriane Janssen, Krista Rahunen, Petri Lehenkari, Mikko A J Finnilä, and Simo Saarakkala
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Medicine ,Science - Abstract
BACKGROUND:Articular cartilage (AC) is mainly composed of water, type II collagen, proteoglycans (PGs) and chondrocytes. The amount of PGs in AC is routinely quantified with digital densitometry (DD) from Safranin O-stained sections, but it is unclear whether similar method could be used for collagens. OBJECTIVE:The aim of this study was to clarify whether collagens can be quantified from histological AC sections using DD. MATERIAL AND METHODS:Sixteen human AC samples were stained with Masson's trichrome or Picrosirius red. Optical densities of histological stains were compared to two commonly used collagen parameters (amide I and collagen CH2 side chain peak at 1338cm-1) measured using Fourier Transform Infrared (FTIR) spectroscopic imaging. RESULTS:Optical density of Modified Masson's trichrome staining, which included enzymatic removal of PGs before staining, correlated significantly with FTIR-derived collagen parameters at almost all depths of cartilage. The other studied staining protocols displayed significant correlations with the reference parameters at only few depth layers. CONCLUSIONS:Based on our findings, modified Masson's trichrome staining protocol is suitable for quantification of AC collagen content. Enzymatic removal of PGs prior to staining is critical as us allows better staining of the collagen. Further optimization of staining protocols may improve the results in the future studies.
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- 2019
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5. Effects of Articular Cartilage Constituents on Phosphotungstic Acid Enhanced Micro-Computed Tomography.
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Sakari S Karhula, Mikko A Finnilä, Mikko J Lammi, Janne H Ylärinne, Sami Kauppinen, Lassi Rieppo, Kenneth P H Pritzker, Heikki J Nieminen, and Simo Saarakkala
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Medicine ,Science - Abstract
Contrast-enhanced micro-computed tomography (CEμCT) with phosphotungstic acid (PTA) has shown potential for detecting collagen distribution of articular cartilage. However, the selectivity of the PTA staining to articular cartilage constituents remains to be elucidated. The aim of this study was to investigate the dependence of PTA for the collagen content in bovine articular cartilage. Adjacent bovine articular cartilage samples were treated with chondroitinase ABC and collagenase to degrade the proteoglycan and the collagen constituents in articular cartilage, respectively. Enzymatically degraded samples were compared to the untreated samples using CEμCT and reference methods, such as Fourier-transform infrared imaging. Decrease in the X-ray attenuation of PTA in articular cartilage and collagen content was observed in cartilage depth of 0-13% and deeper in tissue after collagen degradation. Increase in the X-ray attenuation of PTA was observed in the cartilage depth of 13-39% after proteoglycan degradation. The X-ray attenuation of PTA-labelled articular cartilage in CEμCT is associated mainly with collagen content but the proteoglycans have a minor effect on the X-ray attenuation of the PTA-labelled articular cartilage. In conclusion, the PTA labeling provides a feasible CEμCT method for 3D characterization of articular cartilage.
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- 2017
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6. Fourier transform infrared spectroscopic imaging and multivariate regression for prediction of proteoglycan content of articular cartilage.
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Lassi Rieppo, Jarno Rieppo, Jukka S Jurvelin, and Simo Saarakkala
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Medicine ,Science - Abstract
Fourier Transform Infrared (FT-IR) spectroscopic imaging has been earlier applied for the spatial estimation of the collagen and the proteoglycan (PG) contents of articular cartilage (AC). However, earlier studies have been limited to the use of univariate analysis techniques. Current analysis methods lack the needed specificity for collagen and PGs. The aim of the present study was to evaluate the suitability of partial least squares regression (PLSR) and principal component regression (PCR) methods for the analysis of the PG content of AC. Multivariate regression models were compared with earlier used univariate methods and tested with a sample material consisting of healthy and enzymatically degraded steer AC. Chondroitinase ABC enzyme was used to increase the variation in PG content levels as compared to intact AC. Digital densitometric measurements of Safranin O-stained sections provided the reference for PG content. The results showed that multivariate regression models predict PG content of AC significantly better than earlier used absorbance spectrum (i.e. the area of carbohydrate region with or without amide I normalization) or second derivative spectrum univariate parameters. Increased molecular specificity favours the use of multivariate regression models, but they require more knowledge of chemometric analysis and extended laboratory resources for gathering reference data for establishing the models. When true molecular specificity is required, the multivariate models should be used.
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- 2012
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7. Suitable Cathode NMP Replacement for Efficient Sustainable Printed Li-Ion Batteries
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Rafal Sliz, Juho Valikangas, Hellen Silva Santos, Pauliina Vilmi, Lassi Rieppo, Tao Hu, Ulla Lassi, and Tapio Fabritius
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DMF ,NMC523 ,NMC88 ,screen printing ,Materials Chemistry ,Electrochemistry ,Energy Engineering and Power Technology ,Chemical Engineering (miscellaneous) ,printed batteries ,Electrical and Electronic Engineering ,NMP ,solvent ,NMC - Abstract
N-methyl-2-pyrrolidone (NMP) is the most common solvent for manufacturing cathode electrodes in the battery industry; however, it is becoming restricted in several countries due to its negative environmental impact. Taking into account that ∼99% of the solvent used during electrode fabrication is recovered, dimethylformamide (DMF) is a considerable candidate to replace NMP. The lower boiling point and higher ignition temperature of DMF lead to a significant reduction in the energy consumption needed for drying the electrodes and improve the safety of the production process. Additionally, the lower surface tension and viscosity of DMF enable improved current collector wetting and higher concentrations of the solid material in the cathode slurry. To verify the suitability of DMF as a replacement for NMP, we utilized screen printing, a fabrication method that provides roll-to-roll compatibility while allowing controlled deposition and creation of sophisticated patterns. The battery systems utilized NMC (LiNixMnyCozO2) chemistry in two configurations: NMC523 and NMC88. The first, well-established NCM523, was used as a reference, while NMC88 was used to demonstrate the potential of the proposed method with high-capacity materials. The cathodes were used to create coin and pouch cell batteries that were cycled 1000 times. The achieved results indicate that DMF can successfully replace NMP in the NMC cathode fabrication process without compromising battery performance. Specifically, both the NMP blade-coated and DMF screen-printed batteries retained 87 and 90% of their capacity after 1000 (1C/1C) cycles for NMC523 and NMC88, respectively. The modeling results of the drying process indicate that utilizing a low-boiling-point solvent (DMF) instead of NMP can reduce the drying energy consumption fourfold, resulting in a more environmentally friendly battery production process.
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- 2022
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8. MXene-Polymer Hybrid for High-Performance Gas Sensor Prepared by Microwave-Assisted In-Situ Intercalation
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Jin Zhou, Seyed Hossein Hosseini Shokouh, Hannu‐Pekka Komsa, Lassi Rieppo, Linfan Cui, Zhong‐Peng Lv, Krisztian Kordas, University of Oulu, Department of Electronics and Nanoengineering, Department of Applied Physics, Aalto-yliopisto, and Aalto University
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gas sensing ,Mechanics of Materials ,intercalation ,microwave reaction ,in situ polymerization ,General Materials Science ,MXene ,Industrial and Manufacturing Engineering - Abstract
Funding Information: This manuscript has been co‐authored by UT‐Battelle, LLC, under contract DE‐AC05‐00OR22725 with the US Department of Energy (DOE). The US government retains and the publisher, by accepting the article for publication, acknowledges that the US government retains a nonexclusive, paid‐up, irrevocable, worldwide license to publish or reproduce the published form of this manuscript, or allow others to do so, for US government purposes. DOE will provide public access to these results of federally sponsored research in accordance with the DOE Public Access Plan ( http://energy.gov/downloads/doe‐public‐access‐plan ). Funding Information: This material is based upon work supported in part by: the U.S. Department of Energy, Office of Science, Office of Advanced Scientific Computing Research, Applied Mathematics program under contracts and awards ERKJ314, ERKJ331, ERKJ345; the AEOLUS (Advances in Experimental Design, Optimization and Learning for Uncertain Complex Systems) Department of EnergyMathematical Multifaceted Capabilities Center; the Scientific Discovery through Advanced Computing (SciDAC) program through the FASTMath Institute under Contract No. DE‐AC02‐05CH11231; and by the Laboratory Directed Research and Development program at the Oak Ridge National Laboratory, which is operated by UT‐Battelle, LLC., for the U.S. Department of Energy under contract DE‐AC05‐00OR22725. Publisher Copyright: © 2022 The Authors. Advanced Materials Technologies published by Wiley-VCH GmbH 2D transition-metal carbides (Ti3C2Tx MXene) intercalated with organic molecules have been widely used in batteries and supercapacitors, but are quite rarely reported for gas sensing. Since Ti3C2Tx is sensitive to oxygen, most methods for preparing the intercalated Ti3C2Tx involve stirring the reactants with Ti3C2Tx for several hours under nitrogen protection. Herein, a method to prepare a hybrid of Ti3C2Tx and intercalated polysquaraine through microwave-assisted in situ polymerization that takes only a few minutes without the need of using a protective atmosphere is demonstrated. Owing to the increased interlayer space of the Ti3C2Tx after the polymerization, the gas sensors based on the hybrid exhibit a good sensing performance for NH3 detection, being able to detect at least 500 ppb NH3 with a 2.2% ppm−1 of sensitivity. This study provides a facile preparation method for developing intercalated MXenes, which are expected to be useful for a wide range of applications.
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- 2022
9. Vibrational spectroscopy and its future applications in microbiology
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Tero Ala-Kokko, Sohvi Hörkkö, Lassi Rieppo, Martin Kögler, and Miia M. Jansson
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Materials science ,Infrared ,Fourier transform infrared spectroscopy ,microbiology ,Raman spectroscopy ,time- gated Raman spectroscopy ,surface-enhanced Raman spectroscopy ,Analytical chemistry ,Infrared spectroscopy ,Astrophysics::Cosmology and Extragalactic Astrophysics ,Surface-enhanced Raman spectroscopy ,symbols.namesake ,Fourier transform ,Molecular vibration ,Physics::Atomic and Molecular Clusters ,symbols ,time-gated Raman spectroscopy ,Physics::Chemical Physics ,Instrumentation ,Astrophysics::Galaxy Astrophysics ,Spectroscopy - Abstract
Vibrational spectroscopic techniques, namely Fourier transform infrared (FTIR) and Raman spectroscopy, are based on the study of molecular vibrations, and they are complementary techniques to each other. This review provides an overview of the vibrational spectroscopic techniques applied in microbiology during the past decade. In addition, future applications of the elaborated spectroscopic techniques will be highlighted. The results of this review show that both FTIR and Raman spectroscopy are promising alternatives to conventional diagnostic approaches because they provide label-free and noninvasive bacterial detection, identification, and antibiotic susceptibility testing in a single step. Cost-effective, accurate, and rapid tests are needed in order to improve diagnostics and patient care, to decrease the use of unnecessary antimicrobial agents, to prevent resistant microbials, and to decrease the overall burden of outbreaks. Prior to that, however, the presented approaches need to be validated in a clinical workflow against the conventional diagnostic approaches.
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- 2021
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10. Infrared Fiber-Optic Spectroscopy Detects Bovine Articular Cartilage Degeneration
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Juha Töyräs, Achim Kohler, Rubina Shaikh, Lassi Rieppo, Valeria Tafintseva, Simo Saarakkala, Ervin Nippolainen, Vesa Virtanen, Isaac O. Afara, Boris Zimmermann, and Johanne Heitmann Solheim
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Cartilage, Articular ,Materials science ,Biomedical Engineering ,Physical Therapy, Sports Therapy and Rehabilitation ,Articular cartilage ,Degeneration (medical) ,Osteoarthritis ,01 natural sciences ,03 medical and health sciences ,0302 clinical medicine ,Spectroscopy, Fourier Transform Infrared ,medicine ,Animals ,Immunology and Allergy ,Least-Squares Analysis ,Fourier transform infrared spectroscopy ,Clinical Research papers ,030203 arthritis & rheumatology ,medicine.diagnostic_test ,Cartilage ,010401 analytical chemistry ,Arthroscopy ,medicine.disease ,0104 chemical sciences ,medicine.anatomical_structure ,Attenuated total reflection ,Fiber-Optic Spectroscopy ,Cattle ,Cartilage Diseases ,Biomedical engineering - Abstract
Objective Joint injuries may lead to degeneration of cartilage tissue and initiate development of posttraumatic osteoarthritis. Arthroscopic surgeries can be used to treat joint injuries, but arthroscopic evaluation of articular cartilage quality is subjective. Fourier transform infrared spectroscopy combined with fiber optics and attenuated total reflectance crystal could be used for the assessment of tissue quality during arthroscopy. We hypothesize that fiber-optic mid-infrared spectroscopy can detect enzymatically and mechanically induced damage similar to changes occurring during progression of osteoarthritis. Design Bovine patellar cartilage plugs were extracted and degraded enzymatically and mechanically. Adjacent untreated samples were utilized as controls. Enzymatic degradation was done using collagenase and trypsin enzymes. Mechanical damage was induced by (1) dropping a weight impactor on the cartilage plugs and (2) abrading the cartilage surface with a rotating sandpaper. Fiber-optic mid-infrared spectroscopic measurements were conducted before and after treatments, and spectral changes were assessed with random forest, partial least squares discriminant analysis, and support vector machine classifiers. Results All models had excellent classification performance for detecting the different enzymatic and mechanical damage on cartilage matrix. Random forest models achieved accuracies between 90.3% and 77.8%, while partial least squares model accuracies ranged from 95.8% to 84.7%, and support vector machine accuracies from 91.7% to 80.6%. Conclusions The results suggest that fiber-optic Fourier transform infrared spectroscopy attenuated total reflectance spectroscopy is a viable way to detect minor and major degeneration of articular cartilage. Objective measures provided by fiber-optic spectroscopic methods could improve arthroscopic evaluation of cartilage damage.
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- 2021
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11. Raman spectroscopy is sensitive to biochemical changes related to various cartilage injuries
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Lassi Rieppo, Jari Torniainen, Vesa Virtanen, Isaac O. Afara, Juha Töyräs, Simo Saarakkala, Rubina Shaikh, and Ervin Nippolainen
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Chemistry ,Cartilage ,010401 analytical chemistry ,02 engineering and technology ,Osteoarthritis ,021001 nanoscience & nanotechnology ,medicine.disease ,01 natural sciences ,0104 chemical sciences ,symbols.namesake ,medicine.anatomical_structure ,Injury types ,In vivo ,Impact loading ,medicine ,symbols ,Collagenase ,General Materials Science ,Trypsin Digestion ,0210 nano-technology ,Raman spectroscopy ,Spectroscopy ,Biomedical engineering ,medicine.drug - Abstract
Raman spectroscopy is promising in vivo tool in various biomedical applications; moreover, in recent years, its use for characterizing articular cartilage degeneration has been developing. It has also shown potential for scoring the severity of cartilage lesions, which could be useful in determining the optimal treatment strategy during cartilage repair surgery. However, the effect of different cartilage injury types on Raman spectra is unknown. This study aims to investigate the potential of Raman spectroscopy for detecting changes in cartilage due to different injury types. Artificial injuries were induced in cartilage samples using established mechanical and enzymatic approaches to mimic trauma‐induced and natural degeneration. Mechanical damage was induced using surface abrasion (ABR, n = 12) or impact loading (IMP, n = 12), while enzymatic damage was induced using three different treatments: 30 min trypsin digestion (T30, n = 12), 90 min collagenase digestion (C90, n = 12), and 24 h collagenase digestion (C24, n = 12). Raman spectra were obtained from all specimens, and partial least squares discriminant analysis (PLS‐DA) was used to distinguish cartilage injury types from their respective controls. PLS‐DA cross‐validation accuracies were higher for C24 (88%) and IMP (79%) than for C90 (67%), T30 (63%), and ABR (58%) groups. This study indicates that Raman spectroscopy, combined with multivariate analysis, can discern different cartilage injury types. This knowledge could be useful in clinical decision‐making, for example, selecting the optimal treatment remedy during cartilage repair surgery.
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- 2021
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12. Mineralization of dental tissues and caries lesions detailed with Raman microspectroscopic imaging
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Simo Saarakkala, Mikko A. J. Finnilä, Shuvashis Das Gupta, Vuokko Anttonen, Markus Killenberger, Lassi Rieppo, Tarja Tanner, and Jarkko Heikkilä
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Dental Caries Susceptibility ,Raman imaging ,Dentistry ,02 engineering and technology ,Dental Caries ,Biochemistry ,Mineralization (biology) ,Analytical Chemistry ,Active Caries ,03 medical and health sciences ,symbols.namesake ,0302 clinical medicine ,stomatognathic system ,Electrochemistry ,Dentin ,medicine ,Humans ,Environmental Chemistry ,Tooth Demineralization ,Spectroscopy ,Enamel paint ,business.industry ,Chemistry ,Tooth surface ,030206 dentistry ,021001 nanoscience & nanotechnology ,Demineralization ,stomatognathic diseases ,medicine.anatomical_structure ,visual_art ,visual_art.visual_art_medium ,symbols ,0210 nano-technology ,business ,Raman spectroscopy ,Tooth - Abstract
Dental caries is the most common oral disease that causes demineralization of the enamel and later of the dentin. Depth-wise assessment of the demineralization process could be used to help in treatment planning. In this study, we aimed to provide baseline information for the development of a Raman probe by characterizing the mineral composition of the dental tissues from large composition maps (6 × 3 mm² with 15 μm step size) using Raman microspectroscopy. Ten human wisdom teeth with different stages of dental caries lesions were examined. All of the teeth were cut in half at representative locations of the caries lesions and then imaged with a Raman imaging microscope. The pre-processed spectral maps were combined into a single data matrix, and the spectra of the enamel, dentin, and caries were identified by K-means cluster analysis. Our results showed that unsupervised identification of dental caries is possible with the K-means clustering. The compositional analysis revealed that the carious lesions are less mineralized than the healthy enamel, and when the lesions extend into the dentin, they are even less mineralized. Furthermore, there were more carbonate imperfections in the mineral crystal lattice of the caries tissues than in healthy tissues. Interestingly, we observed gradients in the sound enamel showing higher mineralization and greater mineral crystal perfection towards the tooth surface. To conclude, our results provide a baseline for the methodological development aimed at clinical diagnostics for the early detection of active caries lesions.
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- 2021
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13. Raman microspectroscopic analysis of the tissue-specific composition of the human osteochondral junction in osteoarthritis: A pilot study
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Heikki Kröger, Rami K. Korhonen, A. Joukainen, Ashvin Thambyah, Sakari S. Karhula, Lassi Rieppo, Mikko A. J. Finnilä, S. Kauppinen, Shuvashis Das Gupta, and Simo Saarakkala
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Cartilage, Articular ,Male ,Pathology ,medicine.medical_specialty ,Histopathological grading ,0206 medical engineering ,Biomedical Engineering ,Pilot Projects ,02 engineering and technology ,Osteoarthritis ,Spectrum Analysis, Raman ,Calcified cartilage ,Biochemistry ,Mineralization (biology) ,Biomaterials ,symbols.namesake ,medicine ,Humans ,Tissue specific ,Molecular Biology ,Aged ,Tibia ,Chemistry ,Cartilage ,General Medicine ,Middle Aged ,021001 nanoscience & nanotechnology ,medicine.disease ,020601 biomedical engineering ,Raman microspectroscopy ,medicine.anatomical_structure ,symbols ,Female ,0210 nano-technology ,Raman spectroscopy ,Biotechnology - Abstract
This study investigates the influence of osteoarthritis (OA) disease severity on the bio-composition of the osteochondral junction at the human tibial plateau using Raman microspectroscopy. We specifically aim to analyze the spatial composition of mineralized osteochondral tissues, i.e., calcified cartilage (CC) and subchondral bone plate (SBP) from unfixed, hydrated specimens. We hypothesize that the mineralization of CC and SBP decreases in advanced OA. Twenty-eight cylindrical osteochondral samples (d = 4 mm) from tibial plateaus of seven cadaveric donors were harvested and sorted into three groups following histopathological grading: healthy (n = 5), early OA (n = 8), and advanced OA (n = 15). Raman spectra were subjected to multivariate cluster analyses to identify different tissues. Finally, the tissue-specific composition was analyzed, and the impact of OA was statistically evaluated with linear mixed models. Cluster analyses of Raman spectra successfully distinguished CC and SBP as well as a tidemark region and uncalcified cartilage. CC was found to be more mineralized and the mineral was more crystalline compared with SBP. Both tissues exhibited similar compositional changes as a function of histopathological OA severity. In early OA, the mineralization tends to increase, and the mineral contains fewer carbonate substitutions. Compared with early OA, mineral crystals are rich in carbonate while the overall mineralization decreases in advanced OA. This Raman spectroscopic study advances the methodology for investigating the complex osteochondral junction from native tissue. The developed methodology can be used to elucidate detailed tissue-specific changes in the chemical composition with advancing OA. Statement of Significance In this study, Raman microspectroscopy was utilized to investigate the influence of osteoarthritic degeneration on the tissue-specific biochemical composition of the human osteochondral junction. Multivariate cluster analyses allowed us to characterize subtle compositional changes in the calcified cartilage and subchondral bone plate as well as in the tidemark region. The compositional differences found between the calcified cartilage and subchondral bone plate in both organic and mineral phases will serve as critical benchmark parameters when designing biomaterials for osteochondral repair. We found tissue-specific changes in the mineralization and carbonate substitution as a function of histopathological OA severity. Our developed methodology can be used to investigate the metabolic changes in the osteochondral junction associated with osteoarthritis.
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- 2020
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14. Optimization of measurement mode and sample processing for FTIR microspectroscopy in skin cancer research
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Lassi Rieppo, Hanna-Riikka Teppo, and Bijay Ratna Shakya
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Skin Neoplasms ,Fourier Analysis ,Spectroscopy, Fourier Transform Infrared ,Electrochemistry ,Environmental Chemistry ,Humans ,Biochemistry ,Melanoma ,Spectroscopy ,Analytical Chemistry ,Specimen Handling - Abstract
The use of Fourier Transform Infrared (FTIR) microspectroscopy to study cancerous cells and tissues has gained popularity due to its ability to provide spatially resolved information at the molecular level. Transmission and transflection are the commonly used measurement modes for FTIR microspectroscopy, and the tissue samples measured in these modes are often paraffinized or deparaffinized. Previous studies have shown that variability in the spectra acquired using different measurement modes and sample processing methods affect the result of the analysis. However, there is no protocol that standardizes the mode of measurement and sample processing method to achieve the best classification result. This study compares the spectra of primary (IPC-298) and metastatic (SK-MEL-30) melanoma cell lines acquired in both transmission and transflection modes using paraffinized and deparaffinized samples to determine the optimal combination for accurate classification. Significant differences were observed in the spectra of the same cell line measured in different modes and with or without deparaffinization. The PLS-DA model built for the classification of two cell lines showed high accuracy in each case, suggesting that both modes and sample processing alternatives are suitable for differentiating cultured cell samples using supervised multivariate analysis. The biochemical information contained in the cells capable of discriminating two melanoma cell lines is present regardless of mode or sample type used. However, the paraffinized samples measured in transflection mode provided the best classification.
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- 2022
15. Near-infrared spectroscopy enables quantitative evaluation of human cartilage biomechanical properties during arthroscopy
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Isaac O. Afara, A. Joukainen, Juha Töyräs, Miitu K. M. Honkanen, Jaakko K. Sarin, Jari Torniainen, Mithilesh Prakash, Heikki Kröger, and Lassi Rieppo
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Cartilage, Articular ,Male ,0301 basic medicine ,Materials science ,Knee Joint ,Biomedical Engineering ,Articular cartilage ,Arthroscopy ,03 medical and health sciences ,0302 clinical medicine ,Rheumatology ,Cadaver ,medicine ,Humans ,Orthopedics and Sports Medicine ,Aged ,030203 arthritis & rheumatology ,Principal Component Analysis ,Spectroscopy, Near-Infrared ,medicine.diagnostic_test ,Human cartilage ,Cartilage ,Near-infrared spectroscopy ,technology, industry, and agriculture ,equipment and supplies ,Knn classifier ,030104 developmental biology ,medicine.anatomical_structure ,Mixed effects ,Feasibility Studies ,Regression Analysis ,Female ,Nir spectra ,Biomedical engineering - Abstract
Summary Objective To investigate the feasibility of near-infrared (NIR) spectroscopy (NIRS) for evaluation of human articular cartilage biomechanical properties during arthroscopy. Design A novel arthroscopic NIRS probe designed in our research group was utilized by an experienced orthopedic surgeon to measure NIR spectra from articular cartilage of human cadaver knee joints (ex vivo, n = 18) at several measurement locations during an arthroscopic surgery. Osteochondral samples (n = 265) were extracted from the measurement sites for reference analysis. NIR spectra were remeasured in a controlled laboratory environment (in vitro), after which the corresponding cartilage thickness and biomechanical properties were determined. Hybrid multivariate regression models based on principal component analysis and linear mixed effects modeling (PCA-LME) were utilized to relate cartilage in vitro spectra and biomechanical properties, as well as to account for the spatial dependency. Additionally, a k-nearest neighbors (kNN) classifier was employed to reject outlying ex vivo NIR spectra resulting from a non-optimal probe-cartilage contact. Model performance was evaluated for both in vitro and ex vivo NIR spectra via Spearman's rank correlation (ρ) and the ratio of performance to interquartile range (RPIQ). Results Regression models accurately predicted cartilage thickness and biomechanical properties from in vitro NIR spectra (Model: 0.77 ≤ ρ ≤ 0.87, 2.03 ≤ RPIQ ≤ 3.0; Validation: 0.74 ≤ ρ ≤ 0.84, 1.87 ≤ RPIQ ≤ 2.90). When predicting cartilage properties from ex vivo NIR spectra (0.33 ≤ ρ ≤ 0.57 and 1.02 ≤ RPIQ ≤ 2.14), a kNN classifier enhanced the accuracy of predictions (0.52 ≤ ρ ≤ 0.87 and 1.06 ≤ RPIQ ≤ 1.88). Conclusion Arthroscopic NIRS could substantially enhance identification of damaged cartilage by enabling quantitative evaluation of cartilage biomechanical properties. The results demonstrate the capacity of NIRS in clinical applications.
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- 2019
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16. Raman spectroscopy is sensitive to biochemical changes related to various cartilage injuries
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Juha Töyräs, Simo Saarakkala, Ervin Nippolainen, Lassi Rieppo, Isaac O. Afara, Vesa Virtanen, Jari Torniainen, and Rubina Shaikh
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Chemistry ,Cartilage ,cartilage degeneration ,PLS-DA ,Lesion ,symbols.namesake ,osteoarthritis ,medicine.anatomical_structure ,multivariate analysis ,In vivo ,Impact loading ,Raman spectroscopy ,symbols ,medicine ,Collagenase ,medicine.symptom ,Trypsin Digestion ,Digestion ,Biomedical engineering ,medicine.drug - Abstract
Raman spectroscopy is promising in vivo tool in various biomedical applications; moreover, in recent years, its use for characterizing articular cartilage degeneration has been developing. It has also shown potential for scoring the severity of cartilage lesions, which could be useful in determining the optimal treatment strategy during cartilage repair surgery. However, the effect of different cartilage injury types on Raman spectra is unknown. This study aims to investigate the potential of Raman spectroscopy for detecting changes in cartilage due to different injury types. Artificial injuries were induced in cartilage samples using established mechanical and enzymatic approaches to mimic trauma‐induced and natural degeneration. Mechanical damage was induced using surface abrasion (ABR, n = 12) or impact loading (IMP, n = 12), while enzymatic damage was induced using three different treatments: 30 min trypsin digestion (T30, n = 12), 90 min collagenase digestion (C90, n = 12), and 24 h collagenase digestion (C24, n = 12). Raman spectra were obtained from all specimens, and partial least squares discriminant analysis (PLS‐DA) was used to distinguish cartilage injury types from their respective controls. PLS‐DA cross‐validation accuracies were higher for C24 (88%) and IMP (79%) than for C90 (67%), T30 (63%), and ABR (58%) groups. This study indicates that Raman spectroscopy, combined with multivariate analysis, can discern different cartilage injury types. This knowledge could be useful in clinical decision‐making, for example, selecting the optimal treatment remedy during cartilage repair surgery.
- Published
- 2021
17. Discrimination of melanoma cell lines with Fourier Transform Infrared (FTIR) spectroscopy
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Hanna-Riikka Teppo, Bijay Ratna Shakya, and Lassi Rieppo
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Skin Neoplasms ,Infrared ,Early detection ,02 engineering and technology ,010402 general chemistry ,01 natural sciences ,Analytical Chemistry ,Cell Line ,symbols.namesake ,Spectroscopy, Fourier Transform Infrared ,medicine ,Humans ,Fourier transform infrared spectroscopy ,Spectroscopy ,Instrumentation ,Melanoma ,Fourier Analysis ,Chemistry ,021001 nanoscience & nanotechnology ,medicine.disease ,Molecular biology ,Atomic and Molecular Physics, and Optics ,0104 chemical sciences ,Fourier transform ,Melanoma cell line ,symbols ,Skin cancer ,0210 nano-technology - Abstract
Among skin cancers, melanoma is the lethal form and the leading cause of death in humans. Melanoma begins in melanocytes and is curable at early stages. Thus, early detection and evaluation of its metastatic potential are crucial for effective clinical intervention. Fourier transform infrared (FTIR) spectroscopy has gained considerable attention due to its versatility in detecting biochemical and biological features present in the samples. Changes in these features are used to differentiate between samples at different stages of the disease. Previously, FTIR spectroscopy has been mostly used to distinguish between healthy and diseased conditions. With this study, we aim to discriminate between different melanoma cell lines based on their FTIR spectra. Formalin-fixed paraffin embedded samples from three melanoma cell lines (IPC-298, SK-MEL-30 and COLO-800) were used. Statistically significant differences were observed in the prominent spectral bands of three cell lines along with shifts in peak positions. A partial least square discriminant analysis (PLS-DA) model built for the classification of three cell lines showed an overall accuracy of 92.6% with a sensitivity of 85%, 95.75%, 96.54%, and specificity of 97.80%, 92.14%, 98.64% for the differentiation of IPC-298, SK-MEL-30, and COLO-800, respectively. The results suggest that FTIR spectroscopy can differentiate between different melanoma cell lines and thus potentially characterize the metastatic potential of melanoma.
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- 2020
18. Discrimination of melanoma cell lines with Fourier Transform Infrared (FTIR) spectroscopy
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Bijay Ratna Shakya, Hanna-Riikka Teppo, and Lassi Rieppo
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Infrared ,Chemistry ,Melanoma ,Early detection ,medicine.disease ,Molecular biology ,Paraffin embedded ,symbols.namesake ,Fourier transform ,Melanoma cell line ,symbols ,medicine ,Fourier transform infrared spectroscopy ,Spectroscopy - Abstract
Among skin cancers, melanoma is the lethal form and the leading cause of death in humans. Melanoma begins in melanocytes and is curable at early stages. Thus, early detection and evaluation of its metastatic potential are crucial for effective clinical intervention. Fourier transform infrared (FTIR) spectroscopy has gained considerable attention due to its versatility in detecting biochemical and biological features present in the samples. Changes in these features are used to differentiate between samples at different stages of the disease. Previously, FTIR spectroscopy has been mostly used to distinguish between healthy and diseased conditions. With this study, we aim to discriminate between different melanoma cell lines based on their FTIR spectra. Formalin-fixed paraffin embedded samples from three melanoma cell lines (IPC-298, SK-MEL-30 and COLO-800) were used. Statistically significant differences were observed in the prominent spectral bands of three cell lines along with shifts in peak positions. A partial least square discriminant analysis (PLS-DA) model built for the classification of three cell lines showed an overall accuracy of 92.6% with a sensitivity of 85%, 95.75%, 96.54%, and specificity of 97.80%, 92.14%, 98.64% for the differentiation of IPC-298, SK-MEL-30, and COLO-800, respectively. The results suggest that FTIR spectroscopy can differentiate between different melanoma cell lines and thus potentially characterize the metastatic potential of melanoma.Sources of FundingThis research did not receive any specific grant from funding agencies in the public, commercial, or not-for-profit sectors.
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- 2020
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19. Machine learning-augmented and microspectroscopy-informed multiparametric MRI for the non-invasive prediction of articular cartilage composition
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Sven Nebelung, Roland C. Aydin, Daniel Truhn, Christian J. Cyron, Dorit Merhof, Kevin Linka, Lassi Rieppo, Christiane K. Kuhl, and Johannes Thüring
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0301 basic medicine ,Adult ,Cartilage, Articular ,Male ,Biomedical Engineering ,Articular cartilage ,Osteoarthritis ,Degeneration (medical) ,Diagnostic tools ,Machine learning ,computer.software_genre ,Machine Learning ,03 medical and health sciences ,0302 clinical medicine ,Rheumatology ,Spectroscopy, Fourier Transform Infrared ,medicine ,Humans ,Orthopedics and Sports Medicine ,Multiparametric Magnetic Resonance Imaging ,Aged ,030203 arthritis & rheumatology ,Aged, 80 and over ,Artificial neural network ,business.industry ,Cartilage ,Non invasive ,Multiparametric MRI ,Middle Aged ,Osteoarthritis, Knee ,medicine.disease ,030104 developmental biology ,medicine.anatomical_structure ,Female ,Artificial intelligence ,business ,computer - Abstract
Summary Background Articular cartilage degeneration is the hallmark change of osteoarthritis, a severely disabling disease with high prevalence and considerable socioeconomic and individual burden. Early, potentially reversible cartilage degeneration is characterized by distinct changes in cartilage composition and ultrastructure, while the tissue’s morphology remains largely unaltered. Hence, early degenerative changes may not be diagnosed by clinical standard diagnostic tools. Methods Against this background, this study introduces a novel method to determine the tissue composition non-invasively. Our method involves quantitative MRI parameters (i.e., T1, T1ρ, T2 and T 2 ∗ maps), compositional reference measurements (i.e., microspectroscopically determined local proteoglycan [PG] and collagen [CO] contents) and machine learning techniques (i.e., artificial neural networks [ANNs] and multivariate linear models [MLMs]) on 17 histologically grossly intact human cartilage samples. Results Accuracy and precision were higher in ANN-based predictions than in MLM-based predictions and moderate-to-strong correlations were found between measured and predicted compositional parameters. Conclusion Once trained for the clinical setting, advanced machine learning techniques, in particular ANNs, may be used to non-invasively determine compositional features of cartilage based on quantitative MRI parameters with potential implications for the diagnosis of (early) degeneration and for the monitoring of therapeutic outcomes.
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- 2020
20. Infrared fiber optic spectroscopy detects bovine articular cartilage degeneration
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Valeria Tafintseva, Ervin Nippolainen, Johanne Heitmann Solheim, Boris Zimmermann, Isaac O. Afara, Lassi Rieppo, Vesa Virtanen, Simo Saarakkala, Achim Kohler, Juha Töyräs, and Rubina Shaikh
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Optical fiber ,Materials science ,Cartilage ,Connective tissue ,Degeneration (medical) ,Osteoarthritis ,medicine.disease ,law.invention ,medicine.anatomical_structure ,law ,Attenuated total reflection ,Fiber-Optic Spectroscopy ,medicine ,Fourier transform infrared spectroscopy ,Biomedical engineering - Abstract
Articular cartilage (AC) is a soft connective tissue that covers the ends of articulating bones. Joint injuries may lead to degeneration of cartilage tissue and initiate development of post-traumatic osteoarthritis (OA). Arthroscopic surgeries can be used to treat joint injuries, but arthroscopic evaluation of cartilage quality is subjective. Therefore, new methods are needed for objective assessment of cartilage degeneration. Fourier transform infrared (FTIR) spectroscopy can be used to assess tissue composition based on the fundamental molecular vibrations. When combined with fiber optics and attenuated total reflectance (ATR) crystal, the measurements can be done flexibly without any sample processing. We hypothesize that Fourier transform infrared attenuated total reflection (FTIR-ATR) spectroscopy can detect enzymatically and mechanically induced changes similar to changes occurring during progression of OA. Fresh bovine patellar cartilage plugs (n = 60) were extracted and degraded enzymatically and mechanically. Adjacent untreated control samples (n = 60) were utilized as controls. Enzymatic degradation was implemented by 90-min and 24-hour collagenase as well as 30-min trypsin treatments. Mechanical damage was induced by: 1) dropping a weight impactor on the cartilage plugs, and 2) abrading the cartilage surface with a rotating sandpaper. Fiber optic FTIR-ATR spectroscopic measurements were conducted for control and degraded samples, and spectral changes were assessed with random forest (RF), partial least squares discriminant analysis (PLS-DA), and support vector machine (SVM) classifiers. RF (accuracy 93.1 % to 79.2 %), PLS-DA (accuracy 95.8% to 81.9%), and SVM (accuracy 91.7% to 80.6%) all had excellent classification performance for detecting the different enzymatic and mechanical damage on cartilage matrix. The results suggest that fiber optic FTIR-ATR spectroscopy is a viable way to detect minor degeneration of AC.
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- 2020
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21. Accounting for spatial dependency in multivariate spectroscopic data
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Mithilesh Prakash, Lassi Rieppo, Jaakko K. Sarin, Isaac O. Afara, and Juha Töyräs
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0301 basic medicine ,Multivariate statistics ,Spatial correlation ,business.industry ,Process Chemistry and Technology ,Dimensionality reduction ,Accounting ,Regression analysis ,01 natural sciences ,Cross-validation ,Computer Science Applications ,Analytical Chemistry ,010104 statistics & probability ,03 medical and health sciences ,030104 developmental biology ,Lasso (statistics) ,Principal component analysis ,Principal component regression ,0101 mathematics ,business ,Spectroscopy ,Software ,Mathematics - Abstract
We examine a hybrid multivariate regression technique to account for the spatial dependency in spectroscopic data due to adjacent measurement locations in the same joint by combining dimension reduction methods and linear mixed effects (LME) modeling. Spatial correlation is a common limitation (assumption of independence) encountered in diagnostic applications involving adjacent measurement locations, such as mapping of tissue properties, and can impede tissue evaluations. Near-infrared spectra were collected from equine joints (n = 5) and corresponding biomechanical (n = 202), compositional (n = 530), and structural (n = 530) properties of cartilage tissue were measured. Subsequently, hybrid regression models for estimating tissue properties from the spectral data were developed in combination with principal component analysis (PCA-LME) scores and least absolute shrinkage and selection operator (LASSO-LME). Performance comparison of PCA-LME and principal component regression, and LASSO-LME and LASSO regression was conducted to evaluate the effects of spatial dependency. A systematic improvement in calibration models’ correlation coefficients and a decrease in cross validation errors were observed when accounting for spatial dependency. Our results indicate that accounting for spatial dependency using a LME-based approach leads to more accurate prediction models.
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- 2018
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22. Quantitative susceptibility mapping of articular cartilage: Ex vivo findings at multiple orientations and following different degradation treatments
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Karin Shmueli, Olli Nykänen, Lassi Rieppo, Juha Töyräs, Simo Saarakkala, Ville Kolehmainen, and Mikko J. Nissi
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Cartilage, Articular ,Materials science ,Osteoarthritis ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,Nuclear magnetic resonance ,Collagen network ,medicine ,Animals ,Radiology, Nuclear Medicine and imaging ,Computer Simulation ,cartilage ,Anisotropy ,Full Paper—Biophysics and Basic Biomedical Research ,Polarized light microscopy ,quantitative susceptibility mapping ,Microscopy ,Full Paper ,Cartilage ,Quantitative susceptibility mapping ,collagen matrix ,medicine.disease ,Magnetic Resonance Imaging ,Bovine Cartilage ,Extracellular Matrix ,Hindlimb ,osteoarthritis ,medicine.anatomical_structure ,Cattle ,Collagen ,030217 neurology & neurosurgery ,Calcification ,MRI - Abstract
Purpose: We investigated the feasibility of quantitative susceptibility mapping (QSM) for assessing degradation of articular cartilage by measuring ex vivo bovine cartilage samples subjected to different degradative treatments. Specimens were scanned at several orientations to study if degradation affects the susceptibility anisotropy. T2*‐mapping, histological stainings, and polarized light microscopy were used as reference methods. Additionally, simulations of susceptibility in layered geometry were performed. Methods: Samples (n = 9) were harvested from the patellae of skeletally mature bovines. Three specimens served as controls, and the rest were artificially degraded. MRI was performed at 9.4T using a 3D gradient echo sequence. QSM and T2* images and depth profiles through the centers of the samples were compared with each other and the histological findings. A planar isotropic model with depth‐wise susceptibility variation was used in the simulations. Results: A strong diamagnetic contrast was seen in the deep and calcified layers of cartilage, while T2* maps reflected the typical trilaminar structure of the collagen network. Anisotropy of susceptibility in cartilage was observed and was found to differ from the T2* anisotropy. Slight changes were observed in QSM and T2* following the degradative treatments. In simulations, anisotropy was observed. Conclusions: The results suggest that QSM is not sensitive to cartilage proteoglycan content, but shows sensitivity to the amount of calcification and to the integrity of the collagen network, providing potential for assessing osteoarthritis. The simulations suggested that the anisotropy of susceptibility might be partially explained by the layered geometry of susceptibility in cartilage.
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- 2018
23. Ultrasound Assessment of Human Meniscus
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Lassi Rieppo, Elvis K. Danso, Juuso T. J. Honkanen, Juha Töyräs, Tuomas Virén, and Rami K. Korhonen
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Adult ,Cartilage, Articular ,Male ,Materials science ,Knee Joint ,Acoustics and Ultrasonics ,Biophysics ,Meniscus (anatomy) ,030218 nuclear medicine & medical imaging ,Young Adult ,03 medical and health sciences ,0302 clinical medicine ,Ultrasound scattering ,Cadaver ,medicine ,Quantitative assessment ,Humans ,Meniscus ,Radiology, Nuclear Medicine and imaging ,Aged ,Ultrasonography ,Human cadaver ,030222 orthopedics ,Radiological and Ultrasound Technology ,business.industry ,Ultrasound ,Anatomy ,Middle Aged ,musculoskeletal system ,body regions ,Quantitative ultrasound ,medicine.anatomical_structure ,Ultrasound imaging ,Female ,business ,Biomedical engineering - Abstract
The aim of the present study was to evaluate the applicability of ultrasound imaging to quantitative assessment of human meniscus in vitro. Meniscus samples (n = 26) were harvested from 13 knee joints of non-arthritic human cadavers. Subsequently, three locations (anterior, center and posterior) from each meniscus were imaged with two ultrasound transducers (frequencies 9 and 40 MHz), and quantitative ultrasound parameters were determined. Furthermore, partial-least-squares regression analysis was applied for ultrasound signal to determine the relations between ultrasound scattering and meniscus integrity. Significant correlations between measured and predicted meniscus compositions and mechanical properties were obtained (R2 = 0.38–0.69, p
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- 2017
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24. Optimal Regression Method for Near-Infrared Spectroscopic Evaluation of Articular Cartilage
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Mithilesh Prakash, Jaakko K. Sarin, Isaac O. Afara, Juha Töyräs, and Lassi Rieppo
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Cartilage, Articular ,Multivariate statistics ,0206 medical engineering ,Population ,Analytical chemistry ,Feature selection ,02 engineering and technology ,01 natural sciences ,Least squares ,Lasso (statistics) ,Partial least squares regression ,Animals ,Horses ,education ,Instrumentation ,Spectroscopy ,Mathematics ,education.field_of_study ,Spectroscopy, Near-Infrared ,010401 analytical chemistry ,Regression analysis ,020601 biomedical engineering ,0104 chemical sciences ,Regression Analysis ,Principal component regression ,Biological system - Abstract
Near-infrared (NIR) spectroscopy has been successful in nondestructive assessment of biological tissue properties, such as stiffness of articular cartilage, and is proposed to be used in clinical arthroscopies. Near-infrared spectroscopic data include absorbance values from a broad wavelength region resulting in a large number of contributing factors. This broad spectrum includes information from potentially noisy variables, which may contribute to errors during regression analysis. We hypothesized that partial least squares regression (PLSR) is an optimal multivariate regression technique and requires application of variable selection methods to further improve the performance of NIR spectroscopy-based prediction of cartilage tissue properties, including instantaneous, equilibrium, and dynamic moduli and cartilage thickness. To test this hypothesis, we conducted for the first time a comparative analysis of multivariate regression techniques, which included principal component regression (PCR), PLSR, ridge regression, least absolute shrinkage and selection operator (Lasso), and least squares version of support vector machines (LS-SVM) on NIR spectral data of equine articular cartilage. Additionally, we evaluated the effect of variable selection methods, including Monte Carlo uninformative variable elimination (MC-UVE), competitive adaptive reweighted sampling (CARS), variable combination population analysis (VCPA), backward interval PLS (BiPLS), genetic algorithm (GA), and jackknife, on the performance of the optimal regression technique. The PLSR technique was found as an optimal regression tool (R2Tissue thickness = 75.6%, R2Dynamic modulus = 64.9%) for cartilage NIR data; variable selection methods simplified the prediction models enabling the use of lesser number of regression components. However, the improvements in model performance with variable selection methods were found to be statistically insignificant. Thus, the PLSR technique is recommended as the regression tool for multivariate analysis for prediction of articular cartilage properties from its NIR spectra.
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- 2017
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25. Orientation anisotropy of quantitative MRI relaxation parameters in ordered tissue
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J. Rautiainen, Simo Saarakkala, Lassi Rieppo, Nina Hänninen, Mikko J. Nissi, and Department of Applied Physics, activities
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Materials science ,Biophysics ,lcsh:Medicine ,Article ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,Nuclear magnetic resonance ,Magnetic resonance imaging ,Microscopy ,Diagnosis ,medicine ,Anisotropy ,Adiabatic process ,lcsh:Science ,Polarized light microscopy ,Multidisciplinary ,medicine.diagnostic_test ,Orientation (computer vision) ,Cartilage ,Relaxation (NMR) ,lcsh:R ,Diagnostic markers ,Anatomy ,Magnetic Resonance Imaging ,medicine.anatomical_structure ,Organ Specificity ,lcsh:Q ,030217 neurology & neurosurgery - Abstract
In highly organized tissues, such as cartilage, tendons and white matter, several quantitative MRI parameters exhibit dependence on the orientation of the tissue constituents with respect to the main imaging magnetic field (B0). In this study, we investigated the dependence of multiple relaxation parameters on the orientation of articular cartilage specimens in the B0. Bovine patellar cartilage-bone samples (n = 4) were investigated ex vivo at 9.4 Tesla at seven different orientations, and the MRI results were compared with polarized light microscopy findings on specimen structure. Dependences of T2 and continuous wave (CW)-T1ρ relaxation times on cartilage orientation were confirmed. T2 (and T2*) had the highest sensitivity to orientation, followed by TRAFF2 and adiabatic T2ρ. The highest dependence was seen in the highly organized deep cartilage and the smallest in the least organized transitional layer. Increasing spin-lock amplitude decreased the orientation dependence of CW-T1ρ. T1 was found practically orientation-independent and was closely followed by adiabatic T1ρ. The results suggest that T1 and adiabatic T1ρ should be preferred for orientation-independent quantitative assessment of organized tissues such as articular cartilage. On the other hand, based on the literature, parameters with higher orientation anisotropy appear to be more sensitive to degenerative changes in cartilage., published version, peerReviewed
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- 2017
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26. The influence of osteoarthritic degeneration on the mineral composition and structural properties of human calcified cartilage and subchondral bone plate
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V. Lutz Bueno, Lassi Rieppo, Mikael J. Turunen, Jon Tjörnstrand, Neserin Ali, Mikko A. J. Finnilä, Simo Saarakkala, Manuel Guizar-Sicairos, I. Kestilä, V. Hughes, S. Das Gupta, M. Holler, Patrik Önnerfjord, Hanna Isaksson, Martin Englund, and E. Folkesson
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Pathology ,medicine.medical_specialty ,Rheumatology ,Subchondral bone ,Chemistry ,Biomedical Engineering ,medicine ,Orthopedics and Sports Medicine ,Degeneration (medical) ,Mineral composition ,Calcified cartilage - Published
- 2020
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27. 3D morphometric analysis of calcified cartilage properties using micro-computed tomography
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I. Kestilä, S. Kauppinen, Jérôme Thevenot, I. Hadjab, Simo Saarakkala, Marianne Haapea, Mikko A. J. Finnilä, Heikki J. Nieminen, Kenneth P.H. Pritzker, E. Quenneville, Michael D. Buschmann, Lassi Rieppo, H.K. Gahunia, Sakari S. Karhula, M. Garon, Tuomo Ylitalo, University of Oulu, University of Helsinki, Polytechnique Montreal, Biomomentum Inc., University of Toronto, Department of Neuroscience and Biomedical Engineering, Aalto-yliopisto, Aalto University, and Department of Physics
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0301 basic medicine ,Area fraction ,Cartilage, Articular ,Morphology ,SUBCHONDRAL BONE ,Tidemark ,PATHOGENESIS ,Biomedical Engineering ,Lateral tibial plateau ,Calcified cartilage ,PROGRESSION ,Osteoarthritis ,Severity of Illness Index ,114 Physical sciences ,03 medical and health sciences ,INITIATION ,0302 clinical medicine ,Imaging, Three-Dimensional ,Rheumatology ,medicine ,Cadaver ,Humans ,Orthopedics and Sports Medicine ,Aged ,ta217 ,030203 arthritis & rheumatology ,Micro-computed tomography ,318 Medical biotechnology ,Chemistry ,Micro computed tomography ,Calcinosis ,X-Ray Microtomography ,ARTICULAR-CARTILAGE ,Middle Aged ,Osteoarthritis, Knee ,medicine.disease ,Roughness ,CALCIFICATION ,030104 developmental biology ,Morphometric analysis ,Subchondral bone ,OSTEOARTHRITIS ,PLATE ,Radiographic Image Interpretation, Computer-Assisted ,Tomography ,Biomedical engineering - Abstract
Objective: Our aim is to establish methods for quantifying morphometric properties of calcified cartilage (CC) from micro-computed tomography (mu CT). Furthermore, we evaluated the feasibility of these methods in investigating relationships between osteoarthritis (OA), tidemark surface morphology and open subchondral channels (OSCCs). Method: Samples (n = 15) used in this study were harvested from human lateral tibial plateau (n = 8). Conventional roughness and parameters assessing local 3-dimensional (3D) surface variations were used to quantify the surface morphology of the CC. Subchondral channel properties (percentage, density, size) were also calculated. As a reference, histological sections were evaluated using Histopathological osteoarthritis grading (OARSI) and thickness of CC and subchondral bone (SCB) was quantified. Results: OARSI grade correlated with a decrease in local 3D variations of the tidemark surface (amount of different surface patterns (r(s) = -0.600, P = 0.018), entropy of patterns (EP) (r(s) = -0.648, P = 0.018), homogeneity index (HI) (r(s) = 0.555, P = 0.032)) and tidemark roughness (TMR) (r(s) = -0.579, P = 0.024). Amount of different patterns (ADP) and EP associated with channel area fraction (CAF) (r(p) = 0.876, P
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- 2019
28. Histochemical quantification of collagen content in articular cartilage
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Petri Lehenkari, Lauriane Janssen, Krista Rahunen, Lassi Rieppo, Mikko A. J. Finnilä, and Simo Saarakkala
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Cartilage, Articular ,Pathology ,Biochemistry ,chemistry.chemical_compound ,0302 clinical medicine ,Spectrum Analysis Techniques ,Trichrome ,Spectroscopy, Fourier Transform Infrared ,Medicine and Health Sciences ,Staining ,0303 health sciences ,Multidisciplinary ,Chemistry ,Organic Compounds ,Fourier Transform Infrared Spectroscopy ,Immunohistochemistry ,medicine.anatomical_structure ,Connective Tissue ,Spectrophotometry ,Physical Sciences ,Medicine ,Collagen ,Anatomy ,Research Article ,medicine.medical_specialty ,Histology ,Science ,Type II collagen ,Infrared Spectroscopy ,Research and Analysis Methods ,Masson's trichrome stain ,03 medical and health sciences ,Safranin ,medicine ,Humans ,Cytoplasmic Staining ,030304 developmental biology ,030203 arthritis & rheumatology ,Staining and Labeling ,Cartilage ,Organic Chemistry ,Chemical Compounds ,Biology and Life Sciences ,Proteins ,Amides ,Biological Tissue ,Specimen Preparation and Treatment ,Safranin Staining ,Densitometry ,Collagens - Abstract
Background: Articular cartilage (AC) is mainly composed of water, type II collagen, proteoglycans (PGs) and chondrocytes. The amount of PGs in AC is routinely quantified with digital densitometry (DD) from Safranin O-stained sections, but it is unclear whether similar method could be used for collagens. Objective: The aim of this study was to clarify whether collagens can be quantified from histological AC sections using DD. Material and methods: Sixteen human AC samples were stained with Masson’s trichrome or Picrosirius red. Optical densities of histological stains were compared to two commonly used collagen parameters (amide I and collagen CH2 side chain peak at 1338cm-1) measured using Fourier Transform Infrared (FTIR) spectroscopic imaging. Results: Optical density of Modified Masson’s trichrome staining, which included enzymatic removal of PGs before staining, correlated significantly with FTIR-derived collagen parameters at almost all depths of cartilage. The other studied staining protocols displayed significant correlations with the reference parameters at only few depth layers. Conclusions: Based on our findings, modified Masson’s trichrome staining protocol is suitable for quantification of AC collagen content. Enzymatic removal of PGs prior to staining is critical as us allows better staining of the collagen. Further optimization of staining protocols may improve the results in the future studies.
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- 2019
29. Effect of centrifugal force on the development of articular neocartilage with bovine primary chondrocytes
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Mikko J. Lammi, Juha Prittinen, Juha Piltti, Janne H. Ylärinne, Rami K. Korhonen, Chengjuan Qu, Sakari S. Karhula, Simo Ojanen, Lassi Rieppo, and Simo Saarakkala
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Cartilage, Articular ,0301 basic medicine ,Organogenesis ,Cell- och molekylärbiologi ,Medical Biotechnology (with a focus on Cell Biology (including Stem Cell Biology), Molecular Biology, Microbiology, Biochemistry or Biopharmacy) ,Centrifugation ,Osteoarthritis ,Glycosaminoglycan ,chemistry.chemical_compound ,0302 clinical medicine ,Materials Testing ,Cells, Cultured ,Glycosaminoglycans ,Tissue Scaffolds ,Centrifugal force ,Tissue assembly ,Biochemistry and Molecular Biology ,Hydroxyproline ,medicine.anatomical_structure ,Agarose ,Proteoglycans ,Collagen ,Primary chondrocyte ,Histology ,Materials science ,Cellbiologi ,Orthopaedics ,Cartilage tissue engineering ,Pathology and Forensic Medicine ,03 medical and health sciences ,Chondrocytes ,Elastic Modulus ,medicine ,Animals ,RNA, Messenger ,Medicinsk bioteknologi (med inriktning mot cellbiologi (inklusive stamcellsbiologi), molekylärbiologi, mikrobiologi, biokemi eller biofarmaci) ,Aggrecan ,Cartilage ,Cell Biology ,medicine.disease ,In vitro ,Procollagen peptidase ,030104 developmental biology ,chemistry ,Ortopedi ,Cattle ,030217 neurology & neurosurgery ,Cell and Molecular Biology ,Biokemi och molekylärbiologi ,Biomedical engineering - Abstract
A lot has been invested into understanding how to assemble cartilage tissue in vitro and various designs have been developed to manufacture cartilage tissue with native-like biological properties. So far, no satisfactory design has been presented. Bovine primary chondrocytes are used to self-assemble scaffold-free constructs to investigate whether mechanical loading by centrifugal force would be useful in manufacturing cartilage tissue in vitro. Six million chondrocytes were laid on top of defatted bone disks placed inside an agarose well in 50-ml culture tubes. The constructs were centrifuged once or three times per day for 15 min at a centrifugal force of 771×g for up to 4 weeks. Control samples were cultured under the same conditions without exposure to centrifugation. The samples were analysed by (immuno)histochemistry, Fourier transform infrared imaging, micro-computed tomography, biochemical and gene expression analyses. Biomechanical testing was also performed. The centrifuged tissues had a more even surface covering a larger area of the bone disk. Fourier transform infrared imaging analysis indicated a higher concentration of collagen in the top and bottom edges in some of the centrifuged samples. Glycosaminoglycan contents increased along the culture, while collagen content remained at a rather constant level. Aggrecan and procollagen α1(II) gene expression levels had no significant differences, while procollagen α2(I) levels were increased significantly. Biomechanical analyses did not reveal remarkable changes. The centrifugation regimes lead to more uniform tissue constructs, whereas improved biological properties of the native tissue could not be obtained by centrifugation.
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- 2019
30. In vitro method for 3D morphometry of human articular cartilage chondrons based on micro-computed tomography
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Marianne Haapea, Heikki J. Nieminen, Mikko A. J. Finnilä, E. Quenneville, I. Kestilä, M. Garon, Sakari S. Karhula, Michael D. Buschmann, Lassi Rieppo, Simo Saarakkala, S. Kauppinen, Jérôme Thevenot, Kenneth P.H. Pritzker, I. Hadjab, University of Oulu, Polytechnique Montreal, Biomomentum Inc., University of Toronto, Department of Neuroscience and Biomedical Engineering, Aalto-yliopisto, Aalto University, and Department of Physics
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0301 basic medicine ,Adult ,Cartilage, Articular ,Male ,Morphology ,3D analysis ,3d analysis ,Sample processing ,Biomedical Engineering ,Articular cartilage ,MICROENVIRONMENT ,Osteoarthritis ,ORGANIZATION ,Biology ,In Vitro Techniques ,PERICELLULAR MATRIX ,Article ,Sphericity ,03 medical and health sciences ,0302 clinical medicine ,Chondrocytes ,Imaging, Three-Dimensional ,SCANNING ELECTRON-MICROSCOPY ,Segmentation ,Rheumatology ,medicine ,Humans ,Orthopedics and Sports Medicine ,CONFOCAL MICROSCOPY ,CELL ,ta217 ,030203 arthritis & rheumatology ,3-DIMENSIONAL MORPHOLOGY ,Micro computed tomography ,ADULT HUMAN KNEE ,X-Ray Microtomography ,217 Medical engineering ,Middle Aged ,medicine.disease ,030104 developmental biology ,Female ,Histological grades ,Tomography ,Biomedical engineering ,Hexamethyldisilazane - Abstract
Objective: The aims of this study were: to 1) develop a novel sample processing protocol to visualize human articular cartilage (AC) chondrons using micro-computed tomography (mu CT), 2) develop and validate an algorithm to quantify the chondron morphology in 3D, and 3) compare the differences in chondron morphology between intact and osteoarthritic AC. Method: The developed protocol is based on the dehydration of samples with hexamethyldisilazane (HMDS), followed by imaging with a desktop mCT. Chondron density and depth, as well as volume and sphericity, were calculated in 3D with a custom-made and validated algorithm employing semiautomatic chondron selection and segmentation. The quantitative parameters were analyzed at three AC depth zones (zone 1: 0-10%; zone 2: 10-40%; zone 3: 40-100%) and grouped by the OARSI histological grades (OARSI grades 0-1.0, n = 6; OARSI grades 3.0-3.5, n = 6). Results: After semi-automatic chondron selection and segmentation, 1510 chondrons were approved for 3D morphometric analyses. The chondrons especially in the deeper tissue (zones 2 and 3) were significantly larger (P Conclusion: We have developed a novel sample processing protocol for chondron imaging in 3D, as well as a high-throughput algorithm to semi-automatically quantify chondron/ chondrocyte 3D morphology in AC. Our results also suggest that 3D chondron morphology is affected by the progression of osteoarthritis (OA). (c) 2018 The Authors. Published by Elsevier Ltd on behalf of Osteoarthritis Research Society International. This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). Objective: The aims of this study were: to 1) develop a novel sample processing protocol to visualize human articular cartilage (AC) chondrons using micro-computed tomography (mu CT), 2) develop and validate an algorithm to quantify the chondron morphology in 3D, and 3) compare the differences in chondron morphology between intact and osteoarthritic AC. Method: The developed protocol is based on the dehydration of samples with hexamethyldisilazane (HMDS), followed by imaging with a desktop mCT. Chondron density and depth, as well as volume and sphericity, were calculated in 3D with a custom-made and validated algorithm employing semiautomatic chondron selection and segmentation. The quantitative parameters were analyzed at three AC depth zones (zone 1: 0-10%; zone 2: 10-40%; zone 3: 40-100%) and grouped by the OARSI histological grades (OARSI grades 0-1.0, n = 6; OARSI grades 3.0-3.5, n = 6). Results: After semi-automatic chondron selection and segmentation, 1510 chondrons were approved for 3D morphometric analyses. The chondrons especially in the deeper tissue (zones 2 and 3) were significantly larger (P Conclusion: We have developed a novel sample processing protocol for chondron imaging in 3D, as well as a high-throughput algorithm to semi-automatically quantify chondron/ chondrocyte 3D morphology in AC. Our results also suggest that 3D chondron morphology is affected by the progression of osteoarthritis (OA). (c) 2018 The Authors. Published by Elsevier Ltd on behalf of Osteoarthritis Research Society International. This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). Objective: The aims of this study were: to 1) develop a novel sample processing protocol to visualize human articular cartilage (AC) chondrons using micro-computed tomography (mu CT), 2) develop and validate an algorithm to quantify the chondron morphology in 3D, and 3) compare the differences in chondron morphology between intact and osteoarthritic AC. Method: The developed protocol is based on the dehydration of samples with hexamethyldisilazane (HMDS), followed by imaging with a desktop mCT. Chondron density and depth, as well as volume and sphericity, were calculated in 3D with a custom-made and validated algorithm employing semiautomatic chondron selection and segmentation. The quantitative parameters were analyzed at three AC depth zones (zone 1: 0-10%; zone 2: 10-40%; zone 3: 40-100%) and grouped by the OARSI histological grades (OARSI grades 0-1.0, n = 6; OARSI grades 3.0-3.5, n = 6). Results: After semi-automatic chondron selection and segmentation, 1510 chondrons were approved for 3D morphometric analyses. The chondrons especially in the deeper tissue (zones 2 and 3) were significantly larger (P Conclusion: We have developed a novel sample processing protocol for chondron imaging in 3D, as well as a high-throughput algorithm to semi-automatically quantify chondron/ chondrocyte 3D morphology in AC. Our results also suggest that 3D chondron morphology is affected by the progression of osteoarthritis (OA). (c) 2018 The Authors. Published by Elsevier Ltd on behalf of Osteoarthritis Research Society International. This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
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- 2018
31. Composition, structure and tensile biomechanical properties of equine articular cartilage during growth and maturation
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Rami K. Korhonen, Joonas M.T. Oinas, A.P. Ronkainen, Jarkko Iivarinen, Pieter A.J. Brama, Mikko A. J. Finnilä, Simo Saarakkala, Lassi Rieppo, Heikki J. Helminen, P. R. van Weeren, LS Equine Muscoskeletal Biology, dES AVR, dES RMSC, and Dep Gezondheidszorg Paard
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Cartilage, Articular ,0301 basic medicine ,lcsh:Medicine ,Articular cartilage ,Young's modulus ,Article ,03 medical and health sciences ,symbols.namesake ,Tensile Strength ,Ultimate tensile strength ,medicine ,Animals ,Horses ,Least-Squares Analysis ,lcsh:Science ,Infrared spectroscopy ,Tensile testing ,Polarized light microscopy ,Multidisciplinary ,biology ,Chemistry ,Cartilage ,lcsh:R ,Biomechanical Phenomena ,030104 developmental biology ,medicine.anatomical_structure ,Proteoglycan ,Multivariate Analysis ,biology.protein ,symbols ,Regression Analysis ,Proteoglycans ,Composition (visual arts) ,lcsh:Q ,Collagen ,Biomedical engineering - Abstract
Articular cartilage undergoes structural and biochemical changes during maturation, but the knowledge on how these changes relate to articular cartilage function at different stages of maturation is lacking. Equine articular cartilage samples of four different maturation levels (newborn, 5-month-old, 11-month-old and adult) were collected (N = 25). Biomechanical tensile testing, Fourier transform infrared microspectroscopy (FTIR-MS) and polarized light microscopy were used to study the tensile, biochemical and structural properties of articular cartilage, respectively. The tensile modulus was highest and the breaking energy lowest in the newborn group. The collagen and the proteoglycan contents increased with age. The collagen orientation developed with age into an arcade-like orientation. The collagen content, proteoglycan content, and collagen orientation were important predictors of the tensile modulus (p p r = 0.79) and the breaking energy (r = 0.65). To conclude, the composition and structure of equine articular cartilage undergoes changes with depth that alter functional properties during maturation, with the typical properties of mature tissue reached at the age of 5–11 months.
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- 2018
32. Changes in mineralization in calcified cartilage and subchondral bone plate during osteoarthritis progression
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Ashvin Thambyah, Sakari S. Karhula, Lassi Rieppo, Rami K. Korhonen, Mikko A. J. Finnilä, Simo Saarakkala, and S. Das Gupta
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Pathology ,medicine.medical_specialty ,Rheumatology ,Subchondral bone ,Chemistry ,Biomedical Engineering ,medicine ,Orthopedics and Sports Medicine ,Osteoarthritis ,medicine.disease ,Calcified cartilage ,Mineralization (biology) - Published
- 2019
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33. Detection of enzymatically and mechanically induced degradation of bovine articular cartilage tissue with mid-infrared spectroscopy
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Simo Saarakkala, Lassi Rieppo, Juha Töyräs, Vesa Virtanen, Rubina Shaikh, Isaac O. Afara, and Ervin Nippolainen
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Rheumatology ,Chemistry ,Biomedical Engineering ,Biophysics ,Degradation (geology) ,Orthopedics and Sports Medicine ,Articular cartilage ,Mid infrared spectroscopy - Published
- 2019
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34. On-chip integrated vertically aligned carbon nanotube based super- and pseudocapacitors
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Zoltán Kónya, Robert Vajtai, Topias Järvinen, Koppány L. Juhász, Geza Toth, Olli Pitkänen, Hai M. Duong, Gabriela S. Lorite, Lassi Rieppo, Pulickel M. Ajayan, Ákos Kukovecz, Saikat Talapatra, Krisztian Kordas, Hanlin Cheng, and Aron Dombovari
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Materials science ,lcsh:Medicine ,Nanotechnology ,02 engineering and technology ,Integrated circuit ,Hardware_PERFORMANCEANDRELIABILITY ,010402 general chemistry ,01 natural sciences ,Capacitance ,Energy storage ,Article ,law.invention ,law ,Hardware_INTEGRATEDCIRCUITS ,Electronics ,lcsh:Science ,Supercapacitor ,Multidisciplinary ,lcsh:R ,021001 nanoscience & nanotechnology ,0104 chemical sciences ,Capacitor ,visual_art ,Pseudocapacitor ,Electronic component ,visual_art.visual_art_medium ,lcsh:Q ,0210 nano-technology - Abstract
On-chip energy storage and management will have transformative impacts in developing advanced electronic platforms with built-in energy needs for operation of integrated circuits driving a microprocessor. Though success in growing stand-alone energy storage elements such as electrochemical capacitors (super and pseusocapacitors) on a variety of substrates is a promising step towards this direction. In this work, on-chip energy storage is demonstrated using architectures of highly aligned vertical carbon nanotubes (CNTs) acting as supercapacitors, capable of providing large device capacitances. The efficiency of these structures is further increased by incorporating electrochemically active nanoparticles such as MnOx to form pseudocapacitive architectures thus enhancing device capacitance areal specific capacitance of 37 mF/cm2. The demonstrated on-chip integration is up and down-scalable, compatible with standard CMOS processes, and offers lightweight energy storage what is vital for portable and autonomous device operation with numerous advantages as compared to electronics built from discrete components.
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- 2017
35. 3D histopathological grading of osteochondral tissue using contrast-enhanced micro-computed tomography
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Sakari S. Karhula, Petri Lehenkari, H.K. Gahunia, Heikki J. Nieminen, Tuomo Ylitalo, Edward Hæggström, Lassi Rieppo, Simo Saarakkala, Kenneth P.H. Pritzker, Department of Physics, Department of Neuroscience and Biomedical Engineering, Orthopedic Science Consulting Services, University of Toronto, University of Oulu, University of Helsinki, Aalto-yliopisto, and Aalto University
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Cartilage, Articular ,0301 basic medicine ,Pathology ,X-ray microtomography ,Histopathological grading ,Contrast Media ,Articular cartilage ,Osteoarthritis ,Severity of Illness Index ,Imaging ,0302 clinical medicine ,CONTINUOUS PASSIVE MOTION ,Orthopedics and Sports Medicine ,FIXATION ,Arthroplasty, Replacement, Knee ,Fixation (histology) ,Aged, 80 and over ,Observer Variation ,Micro-computed tomography ,318 Medical biotechnology ,Calcinosis ,Middle Aged ,Osteoarthritis, Knee ,Extracellular Matrix ,AUTOGENOUS PERIOSTEAL GRAFTS ,medicine.medical_specialty ,Histology ,FULL-THICKNESS DEFECTS ,Biomedical Engineering ,114 Physical sciences ,Article ,03 medical and health sciences ,JOINT SURFACES ,Rheumatology ,medicine ,Humans ,ta217 ,Aged ,030203 arthritis & rheumatology ,REPAIR ,business.industry ,3-DIMENSIONAL MORPHOLOGY ,Micro computed tomography ,X-Ray Microtomography ,ARTICULAR-CARTILAGE ,medicine.disease ,030104 developmental biology ,OSTEOARTHRITIS ,Feasibility Studies ,SHRINKAGE ,Nuclear medicine ,business - Abstract
Objective: Histopathological grading of osteochondral (OC) tissue is widely used in osteoarthritis (OA) research, and it is relatively common in post-surgery in vitro diagnostics. However, relying on thin tissue section, this approach includes a number of limitations, such as: (1) destructiveness, (2) sample processing artefacts, (3 ) 2D section does not represent spatial 3D structure and composition of the tissue, and (4) the final outcome is subjective. To overcome these limitations, we recently developed a contrast-enhanced mu CT (CE mu CT) imaging technique to visualize the collagenous extracellular matrix (ECM) of articular cartilage (AC). In the present study, we demonstrate that histopathological scoring of OC tissue from CE mu CT is feasible. Moreover, we establish a new, semi-quantitative OA mu CT grading system for OC tissue. Results: Pathological features were clearly visualized in AC and subchondral bone (SB) with mu CT and verified with histology, as demonstrated with image atlases. Comparison of histopathological grades (OARSI or severity (0-3)) across the characterization approaches, CE mu CT and histology, excellent (0.92, 95% CI = [0.84, 0.96], n = 30) or fair (0.50, 95% CI = [0.16, 0.74], n = 27) intra-class correlations (ICC), respectively. A new mu CT grading system was successfully established which achieved an excellent cross-method (mu CT vs histology) reader-to-reader intra-class correlation (0.78, 95% CI = [0.58, 0.89], n = 27). Conclusions: We demonstrated that histopathological information relevant to OA can reliably be obtained from CE mu CT images. This new grading system could be used as a reference for 3D imaging and analysis techniques intended for volumetric evaluation of OA pathology in research and clinical applications. (C) 2017 Published by Elsevier Ltd on behalf of Osteoarthritis Research Society International.
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- 2017
36. Alterations in structural macromolecules and chondrocyte deformations in lapine retropatellar cartilage 9 weeks after anterior cruciate ligament transection
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Sang Kuy Han, Lassi Rieppo, Simo Saarakkala, A.P. Ronkainen, Rami K. Korhonen, and Walter Herzog
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030203 arthritis & rheumatology ,biology ,Chemistry ,Cartilage ,Anterior cruciate ligament ,0206 medical engineering ,02 engineering and technology ,Osteoarthritis ,Anatomy ,Matrix (biology) ,medicine.disease ,020601 biomedical engineering ,Chondrocyte ,Cell biology ,Extracellular matrix ,03 medical and health sciences ,0302 clinical medicine ,medicine.anatomical_structure ,Proteoglycan ,medicine ,biology.protein ,Extracellular ,Orthopedics and Sports Medicine ,skin and connective tissue diseases - Abstract
The structural integrity and mechanical environment of the articular cartilage matrix directly affect chondrocyte deformations. Rabbit models of early osteoarthritis at 9 weeks following anterior cruciate ligament transection (ACLT) have been shown to alter the deformation behavior of superficial zone chondrocytes in mechanically loaded articular cartilage. However, it is not fully understood whether these changes in cell mechanics are caused by changes in structural macromolecules in the extracellular matrix. Therefore, the purpose of this study was to characterize the proteoglycan content, collagen content, and collagen orientation at 9 weeks post ACLT using microscopic techniques, and relate these changes to the altered cell mechanics observed upon mechanical loading of cartilage. At 9 weeks following ACLT, collagen orientation was significantly (p < 0.05) altered and proteoglycan content was significantly (p < 0.05) reduced in the superficial zone cartilage matrix. These structural changes either in the extracellular or pericellular matrix (ECM and PCM) were also correlated significantly (p < 0.05) with chondrocyte width and height changes, thereby suggesting that chondrocyte deformation response to mechanical compression in early OA changes primarily because of alterations in matrix structure. However, compared to the normal group, proteoglycan content in the PCM from the ACLT group decreased less than that in the surrounding ECM. Therefore, PCM could play a key role to protect excessive chondrocyte deformations in the ACLT group. © 2017 Orthopaedic Research Society. Published by Wiley Periodicals, Inc. J Orthop Res 36:342-350, 2018.
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- 2017
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37. Repair of osteochondral defects with recombinant human type II collagen gel and autologous chondrocytes in rabbit
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Tuomo S Silvast, Jukka S. Jurvelin, Juha Töyräs, Ilkka Kiviranta, Virpi Tiitu, Mikko J. Lammi, Lassi Rieppo, Hertta Pulkkinen, and Piia Valonen
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Cartilage, Articular ,Scaffold ,Pathology ,X-ray microtomography ,02 engineering and technology ,Hindlimb ,Spectroscopy, Fourier Transform Infrared ,Orthopedics and Sports Medicine ,Femur ,Tissue Scaffolds ,biology ,Anatomy ,021001 nanoscience & nanotechnology ,Stifle ,Treatment Outcome ,medicine.anatomical_structure ,Female ,Proteoglycans ,Collagen ,Microscopy, Polarization ,Rabbits ,medicine.symptom ,0210 nano-technology ,medicine.medical_specialty ,Recombinant protein ,0206 medical engineering ,Biomedical Engineering ,Type II collagen ,Autologous cell ,Cartilage tissue engineering ,Lesion ,Chondrocytes ,Rheumatology ,medicine ,Animals ,Humans ,Animal model ,Collagen Type II ,Wound Healing ,Cartilage ,X-Ray Microtomography ,020601 biomedical engineering ,Transplantation ,Hydrogel ,Proteoglycan ,Case-Control Studies ,biology.protein ,Stress, Mechanical ,Gels - Abstract
Summary Objective Recombinant human type II collagen (rhCII) gels combined with autologous chondrocytes were tested as a scaffold for cartilage repair in rabbits in vivo . Method Autologous chondrocytes were harvested, expanded and combined with rhCII-gel and further pre-cultivated for 2 weeks prior to transplantation into a 4 mm diameter lesion created into the rabbit's femoral trochlea ( n = 8). Rabbits with similar untreated lesions ( n = 7) served as a control group. Results Six months after the transplantation the repair tissue in both groups filled the lesion site, but in the rhCII-repair the filling was more complete. Both repair groups also had high proteoglycan and type II collagen contents, except in the fibrous superficial layer. However, the integration to the adjacent cartilage was incomplete. The O'Driscoll grading showed no significant differences between the rhCII-repair and spontaneous repair, both representing lower quality than intact cartilage. In the repair tissues the collagen fibers were abnormally organized and oriented. No dramatic changes were detected in the subchondral bone structure. The repair cartilage was mechanically softer than the intact tissue. Spontaneously repaired tissue showed lower values of equilibrium and dynamic modulus than the rhCII-repair. However, the differences in the mechanical properties between all three groups were insignificant. Conclusion When rhCII was used to repair cartilage defects, the repair quality was histologically incomplete, but still the rhCII-repairs showed moderate mechanical characteristics and a slight improvement over those in spontaneous repair. Therefore, further studies using rhCII for cartilage repair with emphasis on improving integration and surface protection are required.
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- 2013
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38. Correlations of low-field NMR and variable-field NMR parameters with osteoarthritis in human articular cartilage under load
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Mikko A. J. Finnilä, Lassi Rieppo, Petri Lehenkari, Sakari S. Karhula, Carlos Mattea, Simo Saarakkala, Siegfried Stapf, Miika T. Nieminen, and Erik Rössler
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Cartilage, Articular ,Male ,Magnetic Resonance Spectroscopy ,Time Factors ,mechanical load ,relaxometry ,Library science ,Articular cartilage ,030218 nuclear medicine & medical imaging ,Weight-Bearing ,03 medical and health sciences ,0302 clinical medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,European commission ,Sociology ,cartilage ,Spectroscopy ,Aged ,quadrupolar dips ,Aged, 80 and over ,030203 arthritis & rheumatology ,Osteoarthritis, Knee ,osteoarthritis ,Scholarship ,Molecular Medicine ,Female ,low-field NMR - Abstract
NMR experiments carried out at magnetic fields below 1 T provide new relaxation parameters unavailable with conventional clinical scanners. Contrast of T₁ generally becomes larger towards low fields, as slow molecular reorientation processes dominate relaxation at the corresponding Larmor frequencies. This advantage has to be considered in the context of lower sensitivity and frequently reduced spatial resolution. The layered structure of cartilage is one example where a particularly strong variation of T₁ across the tissue occurs, being affected by degenerative diseases such as osteoarthritis (OA). Furthermore, the presence of ¹H‐¹⁴N cross‐relaxation, leading to so‐called quadrupolar dips in the ¹H relaxation time dispersion, provide insight into the concentration and mobility of proteoglycans and collagen in cartilage, both being affected by OA. In this study, low‐field imaging and variable‐field NMR relaxometry were combined for the first time for tissue samples, employing unidirectional load to probe the mechanical properties. 20 human knee cartilage samples were placed in a compression cell, and studied by determining relaxation profiles without and with applied pressure (0.6 MPa) at 50 μm in‐plane resolution, and comparing with volume‐averaged T₁ dispersion. Samples were subsequently stored in formalin, prepared for histology and graded according to the Mankin score system. Quadrupolar dips and thickness change under load showed the strongest correlation with Mankin grade. Average T₁ and change of maximum T₁ under load, as well as its position, correlate with thickness and thickness change. Furthermore, T₁(ω) above 25 mT was found to correlate with thickness change. While volume‐averaged T₁ is not a suitable indicator for OA, its change due to mechanical load and its extreme values are suggested as biomarkers available in low‐field MRI systems. The shape of the dispersion T₁(ω) represents a promising access to understanding and quantifying molecular dynamics in tissue, pointing toward future in vivo tissue studies.
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- 2017
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39. Combination of optical coherence tomography and near infrared spectroscopy enhances determination of articular cartilage composition and structure
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Lassi Rieppo, Isaac O. Afara, Juha Töyräs, Jaakko K. Sarin, Harold Brommer, Simo Saarakkala, dES AVR, and Department of Applied Physics, activities
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Cartilage, Articular ,0301 basic medicine ,Materials science ,Surface Properties ,0206 medical engineering ,lcsh:Medicine ,02 engineering and technology ,Osteoarthritis ,Article ,03 medical and health sciences ,Optical coherence tomography ,Collagen network ,Image Processing, Computer-Assisted ,medicine ,Animals ,Horses ,lcsh:Science ,Spectroscopy, Near-Infrared ,Multidisciplinary ,medicine.diagnostic_test ,Cartilage ,lcsh:R ,Arthroscopy ,medicine.disease ,020601 biomedical engineering ,030104 developmental biology ,medicine.anatomical_structure ,Quantitative Microscopy ,lcsh:Q ,Collagen ,Microscopy, Polarization ,Neural Networks, Computer ,Tomography ,Biophotonics ,Densitometry ,Algorithms ,Tomography, Optical Coherence ,Biomedical engineering - Abstract
Conventional arthroscopic evaluation of articular cartilage is subjective and poorly reproducible. Therefore, implementation of quantitative diagnostic techniques, such as near infrared spectroscopy (NIRS) and optical coherence tomography (OCT), is essential. Locations (n = 44) with various cartilage conditions were selected from mature equine fetlock joints (n = 5). These locations and their surroundings were measured with NIRS and OCT (n = 530). As a reference, cartilage proteoglycan (PG) and collagen contents, and collagen network organization were determined using quantitative microscopy. Additionally, lesion severity visualized in OCT images was graded with an automatic algorithm according to International Cartilage Research Society (ICRS) scoring system. Artificial neural network with variable selection was then employed to predict cartilage composition in the superficial and deep zones from NIRS data, and the performance of two models, generalized (including all samples) and condition-specific models (based on ICRS-grades), was compared. Spectral data correlated significantly (p, published version, peerReviewed
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- 2017
40. Infrared microspectroscopic determination of collagen cross-links in articular cartilage
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Simo Saarakkala, K.A.M. Kulmala, Harri T. Kokkonen, Juha Töyräs, Lassi Rieppo, Vuokko Kovanen, Mikko J. Lammi, HYKS erva, and Department of Applied Physics, activities
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0301 basic medicine ,Cartilage, Articular ,Glycation End Products, Advanced ,collagen ,Spectrophotometry, Infrared ,PROTEOGLYCAN ,01 natural sciences ,High-performance liquid chromatography ,chemistry.chemical_compound ,Biomedicinsk laboratorievetenskap/teknologi ,Partial least squares regression ,Biomedical Laboratory Science/Technology ,infrared spectroscopy ,Pyridinoline ,Threose ,Chemistry ,Medicinsk bildbehandling ,STIFFNESS ,infrapunaspektroskopia ,ta3141 ,Anatomy ,Atomic and Molecular Physics, and Optics ,DIFFUSION ,Electronic, Optical and Magnetic Materials ,medicine.anatomical_structure ,multivariate analysis ,GLYCATION END-PRODUCTS ,NONENZYMATIC GLYCATION ,Biomedical Engineering ,Infrared spectroscopy ,I COLLAGEN ,FORMALIN FIXATION ,cross-links ,Orthopaedics ,Biomaterials ,03 medical and health sciences ,medicine ,Animals ,articular cartilage ,Fourier transform infrared spectroscopy ,Pentosidine ,Least-Squares Analysis ,ta217 ,Chromatography ,Cartilage ,010401 analytical chemistry ,3126 Surgery, anesthesiology, intensive care, radiology ,0104 chemical sciences ,Medical Image Processing ,030104 developmental biology ,Ortopedi ,1182 Biochemistry, cell and molecular biology ,Cattle - Abstract
Collagen forms an organized network in articular cartilage to give tensile stiffness to the tissue. Due to its long half-life, collagen is susceptible to cross-links caused by advanced glycation end-products. The current standard method for determination of cross-link concentrations in tissues is the destructive high-performance liquid chromatography (HPLC). The aim of this study was to analyze the cross-link concentrations nondestructively from standard unstained histological articular cartilage sections by using Fourier transform infrared (FTIR) microspectroscopy. Half of the bovine articular cartilage samples ( n = 27 ) were treated with threose to increase the collagen cross-linking while the other half ( n = 27 ) served as a control group. Partial least squares (PLS) regression with variable selection algorithms was used to predict the cross-link concentrations from the measured average FTIR spectra of the samples, and HPLC was used as the reference method for cross-link concentrations. The correlation coefficients between the PLS regression models and the biochemical reference values were r = 0.84 ( p < 0.001 ), r = 0.87 ( p < 0.001 ) and r = 0.92 ( p < 0.001 ) for hydroxylysyl pyridinoline (HP), lysyl pyridinoline (LP), and pentosidine (Pent) cross-links, respectively. The study demonstrated that FTIR microspectroscopy is a feasible method for investigating cross-link concentrations in articular cartilage, published version, peerReviewed
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- 2017
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41. Clustering of infrared spectra reveals histological zones in intact articular cartilage
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Hanna Isaksson, Lassi Rieppo, Jukka S. Jurvelin, Yevgeniya Kobrina, and Simo Saarakkala
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Cartilage, Articular ,Histological zones ,Biomedical Engineering ,Mineralogy ,Infrared spectroscopy ,Articular cartilage ,01 natural sciences ,Spectral line ,03 medical and health sciences ,symbols.namesake ,Cluster analysis ,Nuclear magnetic resonance ,Fuzzy Logic ,Species Specificity ,Rheumatology ,Spectroscopy, Fourier Transform Infrared ,Collagen network ,Animals ,Orthopedics and Sports Medicine ,Fourier transform infrared spectroscopy ,Spectroscopy ,030304 developmental biology ,0303 health sciences ,Chemistry ,010401 analytical chemistry ,Patella ,0104 chemical sciences ,Fourier transform ,symbols ,Cattle ,Proteoglycans ,Collagen ,Rabbits - Abstract
Summary Objective Articular cartilage (AC) exhibits specific zonal structure that follows the organization of collagen network and concentration of tissue constituents. The aim of this study was to investigate the potential of unsupervised clustering analysis applied to Fourier transform infrared (FTIR) microspectroscopy to detect depth-dependent structural and compositional differences in intact AC. Method Seven rabbit and eight bovine intact patellae AC samples were imaged using FTIR microspectroscopy and normalized raw spectra were clustered using the fuzzy C-means algorithm. Differences in mean spectra of clusters were investigated by quantitative estimation of collagen and proteoglycan (PG) contents, as well as by careful visual investigation of locations of spectral changes. Results Clustering revealed the typical layered structure of AC in both species. However, more distinct clusters were found for rabbit samples, whereas bovine AC showed more complex layered structure. In both species, clustering structure corresponded with that in polarized light microscopic (PLM) images; however, some differences were also observed. Spectral differences between clusters were identified at the same spectral locations for both species. Estimated PG/collagen ratio decreased significantly from superficial to middle or deep zones, which might explain the difference in clustering results compared to PLM. Conclusion FTIR microspectroscopy in combination with cluster analysis allows detailed examination of spatial changes in AC. As far as we know, no previous single technique could reveal a layered structure of AC without any a priori information.
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- 2012
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42. Application of second derivative spectroscopy for increasing molecular specificity of fourier transform infrared spectroscopic imaging of articular cartilage
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Timo Närhi, Heikki J. Helminen, Jarno Rieppo, Lassi Rieppo, Simo Saarakkala, and Jukka S. Jurvelin
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Cartilage, Articular ,Male ,Tissue Fixation ,Absorption spectroscopy ,Infrared ,Biomedical Engineering ,Articular cartilage ,02 engineering and technology ,Fourier transform infrared spectroscopic imaging ,Fixatives ,03 medical and health sciences ,symbols.namesake ,Nuclear magnetic resonance ,Rheumatology ,Formaldehyde ,Spectroscopy, Fourier Transform Infrared ,medicine ,Animals ,Orthopedics and Sports Medicine ,Spectroscopy ,Absorption (electromagnetic radiation) ,Collagen Type II ,030304 developmental biology ,Second derivative ,Cryopreservation ,0303 health sciences ,Chemistry ,Cartilage ,021001 nanoscience & nanotechnology ,Derivative spectra ,Fourier transform ,medicine.anatomical_structure ,symbols ,Cattle ,Proteoglycans ,Collagen ,0210 nano-technology - Abstract
Summary Objective Fourier transform infrared (FT-IR) spectroscopic imaging is a promising method that enables the analysis of spatial distribution of biochemical components within histological sections. However, analysis of FT-IR spectroscopic data is complicated since absorption peaks often overlap with each other. Second derivative spectroscopy is a technique which enhances the separation of overlapping peaks. The objective of this study was to evaluate the specificity of the second derivative peaks for the main tissue components of articular cartilage (AC), i.e. , collagen and proteoglycans (PGs). Materials and methods Histological bovine AC sections were measured before and after enzymatic removal of PGs. Both formalin-fixed sections ( n = 10) and cryosections ( n = 6) were investigated. Relative changes in the second derivative peak heights caused by the removal of PGs were calculated for both sample groups. Results The results showed that numerous peaks, e.g. , peaks located at 1202 cm −1 and 1336 cm −1 , altered less than 5% in the experiment. These peaks were assumed to be specific for collagen. In contrast, two peaks located at 1064 cm −1 and 1376 cm −1 were seen to alter notably, approximately 50% or more. These peaks were regarded to be specific for PGs. The changes were greater in cryosections than formalin-fixed sections. Conclusions The results of this study suggest that the second derivative spectroscopy offers a practical and more specific method than routinely used absorption spectrum analysis methods to obtain compositional information on AC with FT-IR spectroscopic imaging.
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- 2012
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43. Volumetric Analysis of Tidemark and Vessel Perforations through Calcified Cartilage from Micro-computed Tomography: Associations with Osteoarthritis Stage
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Tuomo Ylitalo, Mikko A. J. Finnilä, I. Kestilä, Heikki J. Nieminen, E. Quenneville, M. Garon, Simo Saarakkala, Michael D. Buschmann, Lassi Rieppo, S. Kauppinen, Jérôme Thevenot, H.K. Gahunia, Sakari S. Karhula, I. Hadjab, and Kenneth P.H. Pritzker
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030203 arthritis & rheumatology ,0303 health sciences ,medicine.medical_specialty ,business.industry ,Micro computed tomography ,Biomedical Engineering ,Osteoarthritis ,medicine.disease ,Calcified cartilage ,03 medical and health sciences ,0302 clinical medicine ,Rheumatology ,medicine ,Orthopedics and Sports Medicine ,Radiology ,Stage (cooking) ,business ,030304 developmental biology - Published
- 2017
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44. Computed tomography detects changes in contrast agent diffusion after collagen cross-linking typical to natural aging of articular cartilage
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Lassi Rieppo, Harri T. Kokkonen, Virpi Tiitu, Rami K. Korhonen, Jukka S. Jurvelin, Hannu M. Karjalainen, Vuokko Kovanen, Juha Töyräs, K.A.M. Kulmala, and Janne T. A. Mäkelä
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Cartilage, Articular ,Aging ,0206 medical engineering ,Biomedical Engineering ,Contrast Media ,Mineralogy ,02 engineering and technology ,Osteoarthritis ,Arginine ,Diffusion ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Rheumatology ,Collagen network ,Ioxaglic Acid ,medicine ,Animals ,Orthopedics and Sports Medicine ,Amino Acids ,Pentosidine ,Computed tomography ,030203 arthritis & rheumatology ,Pyridinoline ,biology ,Threose ,Chemistry ,Lysine ,Cartilage ,Cartilage aging ,Delayed Gadolinium Enhanced Magnetic Resonance Imaging of Cartilage ,Patella ,medicine.disease ,Cartilage injury ,020601 biomedical engineering ,Hindlimb ,Contrast agent ,medicine.anatomical_structure ,Proteoglycan ,Case-Control Studies ,biology.protein ,Cattle ,Collagen ,Tetroses ,Tomography, X-Ray Computed ,Cross-linking ,Biomedical engineering - Abstract
SummaryObjectiveThe effect of threose-induced collagen cross-linking on the mechanical and diffusive properties of cartilage was investigated in vitro. In particular, we investigated the potential of Contrast Enhanced Computed Tomography (CECT) to detect changes in articular cartilage after increased collagen cross-linking, which is an age-related phenomenon.MethodsOsteochondral plugs (Ø=6.0mm, n=28) were prepared from intact bovine patellae (n=7). Two of the four adjacent samples, prepared from each patella, were treated with threose to increase the collagen cross-linking, while the other two specimen served as paired controls. One sample pair was mechanically tested and then mechanically injured using a material testing device. Contrast agent [ioxaglate (Hexabrix™)] diffusion was imaged in the other specimen pair for 25h using CECT. Water fraction, collagen and proteoglycan content, collagen network architecture and the amount of cross-links [hydroxylysyl pyridinoline (HP), lysyl pyridinoline (LP) and pentosidine (Pent)] of the samples were also determined.ResultsCartilage collagen cross-linking, both Pent and LP, were significantly (P
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- 2011
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45. Effects of growth and exercise on composition, structural maturation and appearance of osteoarthritis in articular cartilage of hamsters
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Jari Arokoski, Jarno Rieppo, Jukka S. Jurvelin, Juho Marjanen, Pieter A.J. Brama, Jarkko Iivarinen, Lassi Rieppo, Petro Julkunen, Tommi Närhi, Esa P. Halmesmäki, and Heikki J. Helminen
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medicine.medical_specialty ,Histology ,business.industry ,Cartilage ,Biomechanics ,Hamster ,Articular cartilage ,Physical exercise ,Cell Biology ,Anatomy ,Osteoarthritis ,medicine.disease ,medicine.anatomical_structure ,Endocrinology ,Internal medicine ,Collagen network ,medicine ,business ,Molecular Biology ,Ecology, Evolution, Behavior and Systematics ,Developmental Biology ,Sedentary lifestyle - Abstract
Articular cartilage composition and structure are maintained and remodeled by chondrocytes under the influence of loading. Exercise-induced changes in the composition, structure, mechanical properties and tissue integrity of growing and aging hamster articular cartilage were investigated. Articular cartilage samples (n = 191) were harvested from the proximal tibiae of hamsters aged 1, 3, 6, 12 and 15 months. The hamsters were divided into runners and controls. The runners had free access to a running wheel between 1 and 3 months (runner groups 3-, 12- and 15-month-old hamsters) or 1 and 6 months (runner group 6-month-old hamsters) of age. Control animals were subjected to a sedentary lifestyle. Mechanical indentation tests and depth-wise compositional and structural analyses were performed for the cartilage samples. Furthermore, the integrity of articular cartilage was assessed using histological osteoarthritis grading. Exercise affected the collagen network organization after a 5-month exercise period, especially in the middle and deep zones. However, no effect on the mechanical properties was detected after exercise. Before the age of 12 months, the runners showed less osteoarthritis than the controls, whereas at 15 months of age the situation was reversed. It is concluded that, in hamsters, physical exercise at a young age enhances cartilage maturation and alters the depth-wise cartilage structure and composition. This may be considered beneficial. However, exercise at a young age demonstrated adverse effects on cartilage at a later age with a significant increase in the incidence of osteoarthritis.
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- 2010
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46. Vibrational spectroscopy of articular cartilage
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Juha Töyräs, Simo Saarakkala, and Lassi Rieppo
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musculoskeletal diseases ,near-infrared spectroscopy ,Type II collagen ,Connective tissue ,Infrared spectroscopy ,Articular cartilage ,Osteoarthritis ,01 natural sciences ,010309 optics ,Joint disease ,0103 physical sciences ,medicine ,Biochemical composition ,infrared spectroscopy ,Instrumentation ,Spectroscopy ,Chemistry ,010401 analytical chemistry ,medicine.disease ,musculoskeletal system ,0104 chemical sciences ,osteoarthritis ,medicine.anatomical_structure ,Raman spectroscopy ,microscopy ,Biomedical engineering - Abstract
Articular cartilage is a connective tissue that is located at the ends of long bones. Type II collagen, proteoglycans, water, and chondrocytes are the main constituents of articular cartilage. Osteoarthritis, the most common joint disease in the world, causes degenerative changes in articular cartilage tissue. Fourier transform infrared (FTIR), Raman, and near infrared (NIR) spectroscopic techniques offer versatile tools to assess biochemical composition and quality of articular cartilage. These vibrational spectroscopic techniques can be used to broaden our understanding about the compositional changes during osteoarthritis, and they also hold promise in disease diagnostics. In this article, the current literature of articular cartilage spectroscopic studies is reviewed.
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- 2016
47. Imaging of Osteoarthritic Human Articular Cartilage using Fourier Transform Infrared Microspectroscopy Combined with Multivariate and Univariate Analysis
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Maarit Valkealahti, Lassi Rieppo, Mikko A. J. Finnilä, Petri Lehenkari, Simo Saarakkala, Joonas M.T. Oinas, and Department of Applied Physics, activities
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0301 basic medicine ,Cartilage, Articular ,Multivariate statistics ,Knee Joint ,Histopathological grading ,Carbohydrates ,Articular cartilage ,Osteoarthritis ,Article ,03 medical and health sciences ,symbols.namesake ,Biological Factors ,0302 clinical medicine ,Partial least squares regression ,Collagen network ,Spectroscopy, Fourier Transform Infrared ,medicine ,Humans ,030203 arthritis & rheumatology ,Univariate analysis ,Multidisciplinary ,Chemistry ,medicine.disease ,Molecular biophysics ,030104 developmental biology ,Fourier transform ,symbols ,Collagen ,Biomedical engineering - Abstract
Article, The changes in chemical composition of human articular cartilage (AC) caused by osteoarthritis (OA) were investigated using Fourier transform infrared microspectroscopy (FTIR-MS). We demonstrate the sensitivity of FTIR-MS for monitoring compositional changes that occur with OA progression. Twenty-eight AC samples from tibial plateaus were imaged with FTIR-MS. Hyperspectral images of all samples were combined for K-means clustering. Partial least squares regression (PLSR) analysis was used to compare the spectra with the OARSI grade (histopathological grading of OA). Furthermore, the amide I and the carbohydrate regions were used to estimate collagen and proteoglycan contents, respectively. Spectral peak at 1338 cm−1 was used to estimate the integrity of the collagen network. The layered structure of AC was revealed using the carbohydrate region for clustering. Statistically significant correlation was observed between the OARSI grade and the collagen integrity in the superficial (r = −0.55) and the deep (r = −0.41) zones. Furthermore, PLSR models predicted the OARSI grade from the superficial (r = 0.94) and the deep (r = 0.77) regions of the AC with high accuracy. Obtained results suggest that quantitative and qualitative changes occur in the AC composition during OA progression, and these can be monitored by the use of FTIR-MS., published version, peerReviewed
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- 2015
48. Evaluation of quantitativity of histological collagen stains in articular cartilage
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Krista Rahunen, Mikko A. J. Finnilä, Petri Lehenkari, Lassi Rieppo, and Simo Saarakkala
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Pathology ,medicine.medical_specialty ,Chemistry ,0402 animal and dairy science ,Biomedical Engineering ,Articular cartilage ,04 agricultural and veterinary sciences ,02 engineering and technology ,021001 nanoscience & nanotechnology ,040201 dairy & animal science ,Rheumatology ,medicine ,Orthopedics and Sports Medicine ,0210 nano-technology - Published
- 2016
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49. Determination of Extracellular Matrix Orientation of Articular Cartilage in 3D Using Micro-Computed Tomography
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E. Quenneville, Jérôme Thevenot, Heikki J. Nieminen, Michael D. Buschmann, Sakari S. Karhula, Lassi Rieppo, I. Hadjab, Simo Saarakkala, and M. Garon
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030203 arthritis & rheumatology ,0301 basic medicine ,Materials science ,Micro computed tomography ,Biomedical Engineering ,Articular cartilage ,Orientation (graph theory) ,Extracellular matrix ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,Rheumatology ,Orthopedics and Sports Medicine ,Biomedical engineering - Published
- 2017
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50. Automatic 3D Selection, Segmentation, and Analysis of Human Articular Cartilage Chondrons from Micro-computed Tomography in vitro
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Michael D. Buschmann, E. Quenneville, Lassi Rieppo, Mikko A. J. Finnilä, I. Kestilä, Kenneth P.H. Pritzker, S. Kauppinen, Jérôme Thevenot, Heikki J. Nieminen, Sakari S. Karhula, M. Garon, Simo Saarakkala, and I. Hadjab
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Materials science ,Micro computed tomography ,0206 medical engineering ,Biomedical Engineering ,Articular cartilage ,02 engineering and technology ,020601 biomedical engineering ,03 medical and health sciences ,0302 clinical medicine ,Rheumatology ,Orthopedics and Sports Medicine ,Segmentation ,030217 neurology & neurosurgery ,Selection (genetic algorithm) ,Biomedical engineering - Published
- 2017
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