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Background: Plant growth-promoting rhizobacteria (PGPR) are an integral part of agricultural practices due to their roles in promoting plant growth, improving soil conditions, and suppressing diseases. However, researches on the PGPR in the rhizosphere of carrots, an important vegetable crop, is relative limited. Therefore, this study aimed to isolate and characterize PGPR strains from the rhizosphere soil of greenhouse-grown carrots, with a focus on their potential to stimulate carrot growth. Methods: Through a screening process, 12 high-efficiency phosphorus-solubilizing bacteria, one nitrogen-fixing strain, and two potassium-solubilizing strains were screened. Prominent among these were Bacillus firmus MN3 for nitrogen fixation ability, Acinetobacter pittii MP41 for phosphate solubilization, and Bacillus subtilis PK9 for potassium-solubilization. These strains were used to formulate a combined microbial consortium, N3P41K9, for inoculation and further analysis. Results: The application of N3P41K9, significantly enhanced carrot growth, with an increase in plant height by 17.1% and root length by 54.5% in a pot experiment, compared to the control group. This treatment also elevated alkaline-hydrolyzable nitrogen levels by 72.4%, available phosphorus by 48.2%, and available potassium by 23.7%. Subsequent field trials confirmed the efficacy of N3P41K9, with a notable 12.5% increase in carrot yields. The N3P41K9 treatment had a minimal disturbance on soil bacterial diversity and abundance, but significantly increased the prevalence of beneficial genera such as Gemmatimonas and Nitrospira. Genus-level redundancy analysis indicated that the pH and alkali-hydrolyzable nitrogen content were pivotal in shaping the bacterial community composition. Discussion: The findings of this study highlight the feasibility of combined microbial consortium in promoting carrot growth, increasing yield, and enriching the root environment with beneficial microbes. Furthermore, these results suggest the potential of the N3P41K9 consortium for soil amelioration, offering a promising strategy for sustainable agricultural practices. [ABSTRACT FROM AUTHOR]

Introduction: The production of high-quality food for the growing world population on the one hand and the reduction of chemical-synthetic pesticides on the other hand represents a major challenge for agriculture worldwide. The effectiveness of a combination of microbial and non-microbial biostimulants (BSs) with various nitrogen (N) forms in pathogen defense is discussed as a promising, but still poorly understood bio-based alternative for crop protection. Methods: For this reason, nitrate and stabilized ammonium fertilizer both combined with a consortium of Pseudomonas brassicacearum , Bacillus amyloliquefaciens , and Trichoderma harzianum as soil treatment or with a mixture of seaweed extract (Ascophyllum nodosum) together with chitosan-amended micronutrient fertilizer as foliar spray application were compared under controlled greenhouse conditions. Furthermore, a combination of microbial and different non-microbial BSs (seaweed extracts + chitosan) and micronutrients with nitrate or with stabilized ammonium fertilizer was tested under field conditions to improve nutrient availability, promote plant growth, and suppress Zymoseptoria tritici (Zt) in winter wheat. Results and discussion: While plant-protective effects against Zt by the microbial consortium application could be observed particularly under ammonium fertilization, the application of seaweed extract–chitosan mixture expressed plant defense against Zt more strongly under nitrate fertilization. In the field trial, the combination of microbial consortium with the seaweed extract–chitosan mixture together with micronutrients zinc (Zn) and manganese (Mn) showed positive effects against Zt under ammonium fertilization, associated with increased levels of defense metabolites. Furthermore, the additional input of Zn and copper (Cu) from the chitosan application improved the micronutrient status by minimizing the risk of Zn and Cu deficiency under controlled and field conditions. The use of BSs and the inoculation of Zt did not show any effects on plant growth and yield neither under controlled greenhouse conditions nor in the field. Summarized, microbial and non-microbial BSs separately applied or even combined together as one treatment did not influence plant growth or yield but made a positive contribution to an N form-dependent promotion of pathogen defense. [ABSTRACT FROM AUTHOR]

Effects of microbial decomposer application were studied relative to in situ decomposition of paddy straw in the rice-wheat system using both paddy straw incorporation (i.e. mechanical mixing of leftover straw and stubble using rotavator) and retention (i.e. leftover straw and stubble without mechanical mixing) methods. An experiment was conducted on paddy straw degradation during 2020-2021 and 2021-22 using microbial consortium (decomposer) at four locations in Punjab, India using three different treatments. Lignin content, C/N ratio, and tensile strength after 30 days of incorporation and retention of paddy straw were recorded. Microbial treatment along with incorporation improved decomposition parameters from 32.0 to 32.6% (C/N ratio) and 47.5 to 36.6% (lignin), whereas a major share – 28.6 (C/N ratio) and 36.6 (lignin) per cent of decomposition was achieved by soil incorporation as such. Wheat grain yield with and without microbial decomposer was similar across sowing methods (incorporation vs retention) in all locations. Similar observations were recorded in 2021-22 also at the same site of PAU, Ludhiana. Microbial agents responsible for the degradation of straw are present in sufficient quantity in the soil and incorporation of paddy straw in the soil by incorporation using a rotavator can enhance the paddy straw decomposition.

Effects of microbial decomposer application were studied relative to in situ decomposition of paddy straw in the rice-wheat system using both paddy straw incorporation (i.e. mechanical mixing of leftover straw and stubble using rotavator) and retention (i.e. leftover straw and stubble without mechanical mixing) methods. An experiment was conducted on paddy straw degradation during 2020-2021 and 2021-22 using microbial consortium (decomposer) at four locations in Punjab, India using three different treatments. Lignin content, C/N ratio, and tensile strength after 30 days of incorporation and retention of paddy straw were recorded. Microbial treatment along with incorporation improved decomposition parameters from 32.0 to 32.6% (C/N ratio) and 47.5 to 36.6% (lignin), whereas a major share -- 28.6 (C/N ratio) and 36.6 (lignin) per cent of decomposition was achieved by soil incorporation as such. Wheat grain yield with and without microbial decomposer was similar across sowing methods (incorporation vs retention) in all locations. Similar observations were recorded in 2021-22 also at the same site of PAU, Ludhiana. Microbial agents responsible for the degradation of straw are present in sufficient quantity in the soil and incorporation of paddy straw in the soil by incorporation using a rotavator can enhance the paddy straw decomposition. [ABSTRACT FROM AUTHOR]

Aquatic resources are being devastating rapidly due to the continuous intrusion of untreated wastes into the environment due to rapid industrialization and causing severe problems to aquatic life. Different physicochemical methods have been used to reduce these pollutants but all have their own limitations including production of secondary pollutants. The current study was designed to show the effect of cellulolytic and sulphate-reducing bacterial species in the form of a co-culture to treat an in-vitro prepared sulphate-rich wastewater while employing various agro-industrial organic waste as economical growth substrates. A combination of sulphate-reducing and cellulolytic bacteria in a ratio of 1:1 (v/v) was proved to be efficient for the reduction of sulphate in controlled as well as in the experimental conditions. The implicated microbial co-culture reduced 96 and 93 % of the added sulphate (5 gL-1) while using rice straw and animal manure, respectively in a 60-day trial of anaerobic incubation. Mixture of industrial and agricultural waste reduced about 90 % of the total added sulphate. A trend of decrease in pH with time was observed in all the incubated cultures. Our findings will be helpful for devising sustainable waste management strategies. [ABSTRACT FROM AUTHOR]

Wheat straw (WS) is a promising substrate for biogas production by anaerobic digestion (AD) due to its high carbohydrate content. An estimated 0.603 million t yr−1 of WS are generated from wheat production systems in South Africa. This is equivalent to an energy potential of 11 PJ. Despite this, WS is still undervalued as a bioenergy resource in South Africa due to its structural complexity and low nitrogen content. WS disposal methods, such as use in livestock bedding, burning and burying into the soil, inter alia, are not sustainable and may contribute to global warming and climate change. The commercialization of the AD of WS needs to be further developed and promoted. Pre-treatment (i.e., physical, chemical, biological and hybrid methods) and anaerobic co-digestion (AcoD) are novel strategies that can support the conversion of WS into biogas and other value-added products. Current and future research should focus on optimizing pre-treatment and AcoD conditions towards industrialization of WS into valuable products. This paper focuses on the potential use of WS for biogas production in South Africa. The aim is to create information that will promote research and development, and encourage policy makers and stakeholders to participate and invest in WS biogas technology. Were WS biogas technology fully adopted, we believe that it would alleviate energy insecurity and environmental degradation, and sustain the livelihoods of citizens in South Africa. [ABSTRACT FROM AUTHOR]

Crude oil contamination has been widely recognized as a major environmental issue due to its various adverse effects. The use of inhabitant microorganisms (native to the contaminated sites) to detoxify/remove pollutants owing to their diverse metabolic capabilities is an evolving method for the removal/degradation of petroleum industry contaminants. The present study deals with the exploitation of native resident bacteria from crude oil contaminated site (oil exploration field) for bioremediation procedures. Fifteen (out of forty-four) bioremediation-relevant aerobic bacterial strains, belonging to the genera of Bacillus, Stenotrophomonas, Pseudomonas, Paenibacillus, Rhizobium, Burkholderia, and Franconibacter, isolated from crude oil containing sludge, have been selected for the present bioremediation study. Crude oil bioremediation performance of the selected bacterial consortium was assessed using microcosm-based studies. Stimulation of the microbial consortium with nitrogen or phosphorous led to the degradation of 60–70% of total petroleum hydrocarbon (TPH) in 0.25% and 0.5% crude oil experimental sets. CO2 evolution, indicative of crude oil mineralization, was evident with the highest evolution being 28.6 mg mL−1. Ecotoxicity of treated crude oil-containing media was assessed using plant seed germination assay, in which most of the 0.25% and 0.5% treated crude oil sets gave positive results thereby suggesting a reduction in crude oil toxicity. [ABSTRACT FROM AUTHOR]

The presence of diverse carbohydrate-active enzymes (CAZymes) is crucial for the direct bioconversion of lignocellulose. In this study, various anaerobic microbial consortia were employed for the degradation of 10 g/L of minimally pretreated corncob. The involvement of lactic acid bacteria (LAB) and a CAZyme-rich bacterium (Bacteroides cellulosilyticus or Paenibacillus lautus) significantly enhanced the lactic acid production by Ruminiclostridium cellulolyticum from 0.74 to 2.67 g/L (p < 0.01), with a polysaccharide conversion of 67.6%. The supplement of a commercial cellulase cocktail, CTec 2, into the microbial consortia continuously promoted the lactic acid production to up to 3.35 g/L, with a polysaccharide conversion of 80.6%. Enzymatic assays, scanning electron microscopy, and Fourier transform infrared spectroscopy revealed the substantial functions of these CAZyme-rich consortia in partially increasing enzyme activities, altering the surface structure of biomass, and facilitating substrate decomposition. These results suggested that CAZyme-intensified consortia could significantly improve the levels of bioconversion of lignocellulose. Our work might shed new light on the construction of intensified microbial consortia for direct conversion of lignocellulose. [ABSTRACT FROM AUTHOR]

Kombucha is traditionally a non-alcoholic beverage whose production is dependent on culture and the various ingredients used as substrates for fermentation. The goal of our study was to apply hemp leaf and milky mushroom (Calocybe indica) flour as functional ingredients to enhance phytonutrient quality, along with using a microbial consortium highly symbiotic with these ingredients. The study determined the content of phytonutrients (phenolic and flavonoids content), antioxidant activity through percentage inhibition of DPPH radical scavenging activity (%), and microbial communities changes during fermentation. The microbial changes were evaluated by cell viable count (total bacteria, Lactic Acid Bacteria, and Yeast & Mold) and ITS in prepared kombucha (using red tea leaves, pandan leaves, and sucrose) supplemented with functional ingredients: T1 (hemp leaves (control)) and T2 (hemp leaves with milky mushroom flour). The results indicated that microbial consortium changed during fermentation. In the first 7 days, the levels of yeast and mold increased to 6.17 and 6.18 log CFU/mL, respectively. By day 21, the levels of both T1 and T2 continued to rise, reaching 7.78 and 7.82 log CFU/mL, respectively. The viable count of lactic acid bacteria in T1 and T2 gradually increased to 6.79 and 6.70 log CFU/mL, respectively, by day 14. These changes resulted in a marked decrease in pH value, reaching 3.63 and 3.23 in T1 and T2, respectively, by the end of the process (21 days). The total bacterial viable count decreased with an increase in the fermentation time. During fermentation, unique genera of tea fungus observed in T1 and T2 were 64% and 19%, respectively. At the beginning (0 days), the top five genera found in T1 were: g__Setophoma (25.91%), g__Macrocybe (14.88%), g__Cladosporium (7.81%), g__Phaeosphaeria (7.12%), g__Malassezia (6.63%), while the top five genera in T2 were g__Macrocybe (94.55%), g__Setophoma (1.87%), g__Cladosporium (0.77%), g__Phaeosphaeria (0.40%), g__Cordyceps (0.38%). However, on day 21 (end of the process), it was found that g__Dekkera had the highest relative abundance in both T1 and T2. In addition, the supplementation of the two ingredients affected the total phenolic and total flavonoid content of the treatments. At the end of the process, T2 showed values of 155.91 mg GAE/mL for total phenolics and 1.01 mg CE/mL for total flavonoids, compared to T1, which had 129.52 mg GAE/mL and 0.69 mg CE/mL, respectively. Additionally, the DPPH inhibition was higher in T1 (91.95%) compared to T2 (91.03%). The findings suggest that kombucha fermented with these innovative ingredients exhibited enhanced phytonutrients, and served as substrate for LAB and tea fungus fermentation, while limiting the growth of fungal genera and diversity of microbial consortium. [ABSTRACT FROM AUTHOR]

Antimicrobial properties of the new strains of micro-organisms isolated from natural sources of various ecological niches in the Moscow region and the Republic of Tatarstan were studied. Antifungal activity of isolates was detected in a test culture of toxin-producing microscopic fungi that can cause animal and plant diseases: Aspergillus flavus, Candida albicans, Fusarium oxysporum and Penicillium spp. Of the 46 studied micro-organisms of genera Bacillus, Lactobacillus, Lactococcus and Streptomyces isolates, there are four strains (Bacillus subtilis, Lactobacillus plantarum, Propionibacterium freudenreichii and Streptomyces spp.) that showed an ability to produce biologically active metabolites with a pronounced antimicrobial potential against phytopathogenic fungi metabolites. Based on the selected four strains, a Bacterial product LRV composition has been created. Scots pine, pedunculate oak and small-leaved linden seedlings with single and double foliar treatment and Bacterial product LRV at a concentration of 10 mL/L led to an increase in the growth of the aboveground part by 31.8, 51.9 and 25.4%, respectively, and the underground part by 25.0, 37.2 and 25.7%, respectively, compared to the control. The weight of seedlings at the end of the study exceeded the control variant by an average of 26.0, 44.0 and 78.0%, respectively. Plant protection Bacterial product LRV use did not have a significant effect on the group of molds that caused the powdery mildew and Schütte disease damage to trees. The Biological product LRV provided plant protection from fungal diseases caused by Lophodermium pinastri Chev. and Microsphaera alphitoides. [ABSTRACT FROM AUTHOR]

Bacterial cellulose (BC) is emerging as an attractive large-scale polymer due to its superior properties. The dominant static culture for BC fermentation by bacteria or microbial consortium results in low productivity. Agitated culture, as an industrially projected technique, has been widely investigated but exclusively for cellulose-producing bacterial strains. Addressing this concern and evaluating the potential of residues as feedstock, this study highlights the utilization of microbial consortium BA2 and seven agro-industrial wastes including cocoa husks, sugarcane bagasse and others. Remarkably, rice bran (RB) appears as a promising substrate, achieving 2.14 g/L (dry basis) and outperforming the traditional HS medium, evident from a 15-day fermentation. A complex interplay between oxygen availability, glucose consumption and BC yield was revealed; while orbital and magnetic stirring with forced air ventilation (AFV) showed low BC yields and early biomass saturation, 4.07 g/L (dry basis) was targeted by magnetic stirring at 100 rpm from the start using only headspace air. However, beyond controlled operating conditions, mechanical agitation and favorable cellulose adhesion to metal in the stirred tank bioreactor negatively affect BC yield. This pattern uncovers the need for a further approach to the design of bioreactors when the microbial consortium is considered. [ABSTRACT FROM AUTHOR]

BackgroundPlant growth-promoting rhizobacteria (PGPR) are an integral part of agricultural practices due to their roles in promoting plant growth, improving soil conditions, and suppressing diseases. However, researches on the PGPR in the rhizosphere of carrots, an important vegetable crop, is relative limited. Therefore, this study aimed to isolate and characterize PGPR strains from the rhizosphere soil of greenhouse-grown carrots, with a focus on their potential to stimulate carrot growth.MethodsThrough a screening process, 12 high-efficiency phosphorus-solubilizing bacteria, one nitrogen-fixing strain, and two potassium-solubilizing strains were screened. Prominent among these were Bacillus firmus MN3 for nitrogen fixation ability, Acinetobacter pittii MP41 for phosphate solubilization, and Bacillus subtilis PK9 for potassium-solubilization. These strains were used to formulate a combined microbial consortium, N3P41K9, for inoculation and further analysis.ResultsThe application of N3P41K9, significantly enhanced carrot growth, with an increase in plant height by 17.1% and root length by 54.5% in a pot experiment, compared to the control group. This treatment also elevated alkaline-hydrolyzable nitrogen levels by 72.4%, available phosphorus by 48.2%, and available potassium by 23.7%. Subsequent field trials confirmed the efficacy of N3P41K9, with a notable 12.5% increase in carrot yields. The N3P41K9 treatment had a minimal disturbance on soil bacterial diversity and abundance, but significantly increased the prevalence of beneficial genera such as Gemmatimonas and Nitrospira. Genus-level redundancy analysis indicated that the pH and alkali-hydrolyzable nitrogen content were pivotal in shaping the bacterial community composition.DiscussionThe findings of this study highlight the feasibility of combined microbial consortium in promoting carrot growth, increasing yield, and enriching the root environment with beneficial microbes. Furthermore, these results suggest the potential of the N3P41K9 consortium for soil amelioration, offering a promising strategy for sustainable agricultural practices.

Abstract To understand the ecology of species and promote biotechnology through beneficial strain selection for improving starch yield in maize wet-milling steeping, bacterial diversity and community structure during the counter-current steeping process in a commercial steeping system were characterized and investigated. The microbial diversity in the steeping liquor, which consisted of 16 phyla, 131 families, and 290 genera, was more abundant compared to those present on the surface of unsteeped maize. As the counter-current steeping progressed, exposing newer maize to the older steepwater, Lactobacillus dominated, replacing Rahnella, Pseudomonas, Pantoea, and Serratia. The thermophilic and acidophilic microbial consortia were enriched through adaptive evolution engineering and employed to improve starch yield. Several steeping strategies were evaluated, including water alone, SO2 alone, mono-culture of B. coagulans, microbial consortia, and a combination of consortium and SO2. Combining the microbial consortium with SO2 significantly increased the starch yield to, about 66.4 ± 0.5%, a 22% and 46% increase over SO2 alone and the consortium alone, respectively. Scanning electron microscope (SEM) of steeped maize structure indicated that the combination of consortium and SO2 disrupted the protein matrix and widened gaps between starch granules in maize endosperm. This released proteins into the steepwater and left starch granules in the aleurone layer. The steeping strategy of using thermophilic and acidophilic microbial consortium as additives shows potential application as an environmentally friendly alternative to conventional maize steeping procedures.

To understand the ecology of species and promote biotechnology through beneficial strain selection for improving starch yield in maize wet-milling steeping, bacterial diversity and community structure during the counter-current steeping process in a commercial steeping system were characterized and investigated. The microbial diversity in the steeping liquor, which consisted of 16 phyla, 131 families, and 290 genera, was more abundant compared to those present on the surface of unsteeped maize. As the counter-current steeping progressed, exposing newer maize to the older steepwater, Lactobacillus dominated, replacing Rahnella, Pseudomonas, Pantoea, and Serratia. The thermophilic and acidophilic microbial consortia were enriched through adaptive evolution engineering and employed to improve starch yield. Several steeping strategies were evaluated, including water alone, SO2 alone, mono-culture of B. coagulans, microbial consortia, and a combination of consortium and SO2. Combining the microbial consortium with SO2 significantly increased the starch yield to, about 66.4 ± 0.5%, a 22% and 46% increase over SO2 alone and the consortium alone, respectively. Scanning electron microscope (SEM) of steeped maize structure indicated that the combination of consortium and SO2 disrupted the protein matrix and widened gaps between starch granules in maize endosperm. This released proteins into the steepwater and left starch granules in the aleurone layer. The steeping strategy of using thermophilic and acidophilic microbial consortium as additives shows potential application as an environmentally friendly alternative to conventional maize steeping procedures. Highlights: Characterization of bacterial diversity in a commercial steeping system. Adaptation of a thermophilic and acidophilic microbial consortium for maize steeping. Development of an environmentally friendly strategy for maize steeping. Consortium combining SO2 leads to 66.4% increase in starch yield. Novel strategy disrupts protein matrix making starch granules to aleurone layer. [ABSTRACT FROM AUTHOR]

Soil microorganisms play an important role on plant development and the homogenization of soil microbiomes is harmful to agri-environments. It is essential that agricultural practices are carried out by taking soil microbiome preservation in consideration. Agroforestry systems are one of the most environmentally friendly agrosystems and its plant diversity directly influences the soil microbiome diversity. In this study, we tested the efficacy of the microbial consortium (MC) obtained from compost and the cyanobacteria Arthrospira platensis (Ap) compared with the application of the vermicompost tea (VT) and bokashi (Bk) in arugula, lettuce, beetroot, and carrot in two seasons in a recently implemented agroforestry system. We aimed to verify if MC and Ap could be new promising sustainable alternatives in vegetables production. The strategy can be broken down into three stages: (1) Green manure management: planting, cutting, griding, and incorporation in the soil, (2) agroforestry system implementation, and (3) treatment application in a completely randomized blocks design. The vegetables yield was measured. Nutritional traits and the plant root system were evaluated for arugula and lettuce. Greater plant yield, nutritional values, and plant root development were observed in the MC-treated plants; Ap and Bk had, in general, similar results. Our data show that both MC and Ap have potential to become a sustainable product for agricultural production. [ABSTRACT FROM AUTHOR]

The aim of this paper is to provide insight into research and activities of in situ remediation to remove petroleum hydrocarbon pollutants from a contaminated aquifer's sediment, located near two radial collector wells of a water supply system. It was decided that the most appropriate method for remediation of this aquifer's sediment is in situ bioremediation because it is clean, efficient and sustainable technology. Before the start of the bioremediation process, it was necessary to isolate and cultivate the microorganisms present at the contamination site, so they could be later applied in the bioremediation process. The samples before and after the bioremediation were studied using both GC and GC × GC–MS to determine how the concentrations of contaminants changed over time. Additionally, in this paper, a spatiotemporal representation of the change in hydrocarbon content by depth within the zone of the highest contamination over time is shown. After 12 months of bioremediation, the hydrocarbon content in the samples decreased by 82.0%, and based on GCxGC-MS analysis, the order of degradation of various hydrocarbon groups was as follows: steranes (99.6%), isoprenoids (98.4%), benzene derivatives (98.4%), alkanes (97.2%), and terpenes (49.3%). The exponential decay model showed the greatest decomposition rate of hydrocarbons occurred at depths of 8–10 m, with an average decay constant of 0.227, independent of the initial concentration of hydrocarbons. To the best of our knowledge, to date, the described approach has not been applied to an aquifer (the simultaneous treatment of groundwater and its associated sediment layers). [ABSTRACT FROM AUTHOR]

Globally, more than 5 billion tons of crop residue (mainly rice straw) are produced yearly, and their management results in pollution, which kills microbes and limits soil nutrient recycling. Therefore, on-farm management that boosts degradation speed will improve the practicability of crop residue retention practices. The present study evaluated the 21 microbial isolates (Pseudomonas, Bacillus, Aspergillus, Trichoderma, Fusarium, and Rhizopus) from the soil of different agroclimatic zones obtained from rice fields for in situ straw degradation. The microbial diversity of these isolates was analyzed using 16 s rRNA and 18 s rRNA primers from various soil samples. The rice straw was used for degradation from isolated pathogens individually and in combination, and the results were analyzed using FTIR (Fourier transform infrared spectroscopy). The result suggested that the straw's degradation was the maximum with Trichoderma and Aspergillus, followed by the mixture of the isolates (Pseudomonas, Bacillus, Aspergillus, Trichoderma, Fusarium, and Rhizopus). Furthermore, SEM (scanning electron microscope) observed the degradation rate on different days of inoculation (7, 14, 28, 56, 70, and 100 DAI). The results showed that 90 DAI caused the highest degradation of rice straw. Therefore, Trichoderma containing microbial consortia could be used for vermicompost production from rice straw in field conditions, and it could increase crop productivity. Overall, our study added knowledge in rice straw management through a microbial consortium for better utilization in predominantly rice-growing countries. [ABSTRACT FROM AUTHOR]

Kombucha is traditionally a non-alcoholic beverage whose production is dependent on culture and the various ingredients used as substrates for fermentation. The goal of our study was to apply hemp leaf and milky mushroom (Calocybe indica) flour as functional ingredients to enhance phytonutrient quality, along with using a microbial consortium highly symbiotic with these ingredients. The study determined the content of phytonutrients (phenolic and flavonoids content), antioxidant activity through percentage inhibition of DPPH radical scavenging activity (%), and microbial communities changes during fermentation. The microbial changes were evaluated by cell viable count (total bacteria, Lactic Acid Bacteria, and Yeast & Mold) and ITS in prepared kombucha (using red tea leaves, pandan leaves, and sucrose) supplemented with functional ingredients: T1 (hemp leaves (control)) and T2 (hemp leaves with milky mushroom flour). The results indicated that microbial consortium changed during fermentation. In the first 7 days, the levels of yeast and mold increased to 6.17 and 6.18 log CFU/mL, respectively. By day 21, the levels of both T1 and T2 continued to rise, reaching 7.78 and 7.82 log CFU/mL, respectively. The viable count of lactic acid bacteria in T1 and T2 gradually increased to 6.79 and 6.70 log CFU/mL, respectively, by day 14. These changes resulted in a marked decrease in pH value, reaching 3.63 and 3.23 in T1 and T2, respectively, by the end of the process (21 days). The total bacterial viable count decreased with an increase in the fermentation time. During fermentation, unique genera of tea fungus observed in T1 and T2 were 64% and 19%, respectively. At the beginning (0 days), the top five genera found in T1 were: g__Setophoma (25.91%), g__Macrocybe (14.88%), g__Cladosporium (7.81%), g__Phaeosphaeria (7.12%), g__Malassezia (6.63%), while the top five genera in T2 were g__Macrocybe (94.55%), g__Setophoma (1.87%), g__Cladosporium (0.77%), g__Phaeosphaeria (0.40%), g__Cordyceps (0.38%). However, on day 21 (end of the process), it was found that g__Dekkera had the highest relative abundance in both T1 and T2. In addition, the supplementation of the two ingredients affected the total phenolic and total flavonoid content of the treatments. At the end of the process, T2 showed values of 155.91 mg GAE/mL for total phenolics and 1.01 mg CE/mL for total flavonoids, compared to T1, which had 129.52 mg GAE/mL and 0.69 mg CE/mL, respectively. Additionally, the DPPH inhibition was higher in T1 (91.95%) compared to T2 (91.03%). The findings suggest that kombucha fermented with these innovative ingredients exhibited enhanced phytonutrients, and served as substrate for LAB and tea fungus fermentation, while limiting the growth of fungal genera and diversity of microbial consortium.

IntroductionThe production of high-quality food for the growing world population on the one hand and the reduction of chemical-synthetic pesticides on the other hand represents a major challenge for agriculture worldwide. The effectiveness of a combination of microbial and non-microbial biostimulants (BSs) with various nitrogen (N) forms in pathogen defense is discussed as a promising, but still poorly understood bio-based alternative for crop protection. MethodsFor this reason, nitrate and stabilized ammonium fertilizer both combined with a consortium of Pseudomonas brassicacearum, Bacillus amyloliquefaciens, and Trichoderma harzianum as soil treatment or with a mixture of seaweed extract (Ascophyllum nodosum) together with chitosan-amended micronutrient fertilizer as foliar spray application were compared under controlled greenhouse conditions. Furthermore, a combination of microbial and different non-microbial BSs (seaweed extracts + chitosan) and micronutrients with nitrate or with stabilized ammonium fertilizer was tested under field conditions to improve nutrient availability, promote plant growth, and suppress Zymoseptoria tritici (Zt) in winter wheat. Results and discussionWhile plant-protective effects against Zt by the microbial consortium application could be observed particularly under ammonium fertilization, the application of seaweed extract–chitosan mixture expressed plant defense against Zt more strongly under nitrate fertilization. In the field trial, the combination of microbial consortium with the seaweed extract–chitosan mixture together with micronutrients zinc (Zn) and manganese (Mn) showed positive effects against Zt under ammonium fertilization, associated with increased levels of defense metabolites. Furthermore, the additional input of Zn and copper (Cu) from the chitosan application improved the micronutrient status by minimizing the risk of Zn and Cu deficiency under controlled and field conditions. The use of BSs and the inoculation of Zt did not show any effects on plant growth and yield neither under controlled greenhouse conditions nor in the field. Summarized, microbial and non-microbial BSs separately applied or even combined together as one treatment did not influence plant growth or yield but made a positive contribution to an N form-dependent promotion of pathogen defense.

Biomass residues and industrial waste are of great interest for their potential to produce a wide range of bioenergy and value-added products. Crude glycerol can be valorized into value added products by several microorganisms through microbial fermentation. Thus, Significant efforts have been made to develop biological methods to convert crude glycerol into various valuable chemicals and fuels, including 1, 3-propanediol, hydrogen and ethanol. In this context, our work have use glycerol medium as source of carbon for investigate bioethanol and 1, 3-propandiol production, using a microbial consortium. All experiments was carried out in sealed bottles, the reaction medium is placed in the shaker incubator at 37°C with stirring at 130 rpm. . Nitrogen gas was injected to create anaerobic conditions. The highest concentration of ethanol and 1,3 – propanediol obtained were 3.47 (g/l) and 4.8 mg/l respectively . These results highlight promising avenues for the valorization of biomass residues and industrial wastes in sustainable bioenergy production.

The Kemerovo region is a region of extreme farming, and therefore requires the development of effective biological methods for improving productivity of cultivated plants adapted to these conditions. The purpose of the current work was to find plant growth-stimulating microorganisms associated with spring barley, as well as to form a microbial consortium on their basis and to conduct field trial. The objects of the study were spring barley seeds selected in the Kemerovo region, growth-stimulating microorganisms isolated from them, and consortia formed on their basis. During the study, there were isolated and tested 9 bacterial isolates for their ability to synthesize growth-stimulating substances (kinetin and indolyl-3-acetic acid). There were selected three strains with the best indicators SHv-2, SHv-5, SHv-6 for further studies. There has been found that the strains are capable of fixing nitrogen (SHv-2 – 800 µg/ml; SHv-5 – 210 µg/ml; SHv-6 – 840 µg/ml). There was also seen an ability to solubilize phosphates (SHv-2 – 2.53; SHv-5 – 1.25; SHv-6 – 3.33). The study of cultural, morphological and biochemical properties made it possible to identify such strains as SHv-2 – Pantoea allii; SHv-5 – Raoultella ornithinolytica; SHv-6 – Pantoea ananatis. Based on these microorganisms, there were made various variants of microbial consortia, which were also valued for their ability to produce growth-promoting substances and fix nitrogen. Consortium MC-7 composed with Pantoea allii, Raoultella ornithinolytica, Pantoea ananatis in a ratio of 1:1:3, respectively, showed maximum activity in terms of the studied parameters. Field trials of this consortium have shown that it successfully improves spring barley productivity. Despite abnormal weather conditions (lack of productive rains), there was an increase in the growth of crops treated by the consortium in comparison with control options. There have been established the most promising options for processing spring barley, options 3 and 4.

Introduction: Spent mushroom substrate (SMS) is a solid waste in agricultural production that contains abundant lignocellulosic fibers. The indiscriminate disposal of SMS will lead to significant resource waste and pollution of the surrounding environment. The isolation and screening of microorganisms with high cellulase degradation capacity is the key to improving SMS utilization. Methods: The cellulose-degrading microbial consortiums were constructed through antagonism and enzyme activity test. The effect of microbial consortiums on lignocellulose degradation was systematically evaluated by SMS liquid fermentation experiments. Results: In this study, four strains of cellulose-degrading bacteria were screened, and F16, F, and F7 were identified as B. amyloliquefaciens, PX1 identified as B. velezensis. At the same time, two groups of cellulose efficient degrading microbial consortiums (PX1 + F7 and F16 + F) were successfully constructed. When SMS was used as the sole carbon source, their carboxymethyl cellulase (CMCase) activities were 225.16 and 156.63 U/mL, respectively, and the filter paper enzyme (FPase) activities were 1.91 and 1.64 U/mL, respectively. PX1 + F7 had the highest degradation rate of hemicellulose and lignin, reaching 52.96% and 52.13%, respectively, and the degradation rate of F16 + F was as high as 56.30%. Field emission scanning electron microscopy (FESEM) analysis showed that the surface microstructure of SMS changed significantly after microbial consortiums treatment, and the change of absorption peak in Fourier transform infrared spectroscopy (FTIR) and the increase of crystallinity in X-ray diffraction (XRD) confirmed that the microbial consortiums had an actual degradation effect on SMS. The results showed that PX1 + F7 and F16 + F could effectively secrete cellulase and degrade cellulose, which had practical significance for the degradation of SMS. Discussion: In this study, the constructed PX1 + F7 and F16 + F strains can effectively secrete cellulase and degrade cellulose, which holds practical significance in the degradation of SMS. The results can provide technical support for treating highcellulose solid waste and for the comprehensive utilization of biomass resources. [ABSTRACT FROM AUTHOR]

Recent advances in the microbial degradation of persistent organic pollutants have the potential to mitigate the damage caused by anthropogenic activities that are harmfully impacting agriculture soil ecosystems and human health. In this paper, we summarize the pollution characteristics of neonicotinoid insecticides (NNIs) in agricultural fields in China and other countries and then discuss the existing research on screening for NNI-degrading functional bacterial strains, their degradation processes, the construction of microbial consortia, and strategies for their application. We explore the current needs and solutions for improving the microbial remediation rate of NNI-contaminated soil and how these solutions are being developed and applied. We highlight several scientific and technological advances in soil microbiome engineering, including the construction of microbial consortia with a broad spectrum of NNI degradation and microbial immobilization to improve competition with indigenous microorganisms through the provision of a microenvironment and niche suitable for NNI-degrading bacteria. This paper highlights the need for an interdisciplinary approach to improving the degradation capacity and in situ survival of NNI-degrading strains/microbial consortia to facilitate the remediation of NNI-contaminated soil using strains with a broad spectrum and high efficiency in NNI degradation. [ABSTRACT FROM AUTHOR]

The application of beneficial microbial consortium can effectively improve plant disease resistance and its growth. Various fungi were compounded with Bacillus velezensis LJ02 and applied to watermelon plants in this paper. The results showed that the microbial consortium T2 (compounded Bacillus velezensis LJ02 with Aspergillus aculeatus 9) can effectively control gummy stem blight and powdery mildew in watermelon, while the control effect reached 83.56% and 70.93%, respectively (p < 0.05). Compound treatment improved the diversity and richness of the rhizosphere microbial community structure, and the relative abundance of Caulobacterales and Xanthomonadaceae significantly increased after applying T2 to the soil. Meanwhile, the internode length was significantly decreased 28% (p < 0.05), and the maximum leaf length increased 10.33% (p < 0.05). In addition, the microbial consortium delays the maturity of watermelon vegetables. By studying the effects of microbial consortium on watermelon seedlings, our study provides a theoretical basis for the popularization and application of the compound inoculant. [ABSTRACT FROM AUTHOR]

The public widely uses Paracetamol (PCT) as an analgesic drug to reduce pain and fever symptoms in the human body. The COVID-19 pandemic has led to an increase in PCT consumption, resulting in its presence in water bodies and establishing it as a common aquatic environmental pollutant. Conventional methods for PCT removal rely on chemical treatments, which necessitate harsh reaction conditions and incur high operational costs. This study aims to investigate the potential for PCT degradation within the anode environment of the Microbial Fuel Cell (MFC) system, using a consortium of bacteria isolated from sewage sludge. The initial PCT concentration and the pH of the anode environment were varied. The results showed that PCT degradation occurred within 72 hours. The highest PCT removal rate was achieved at elevated concentrations, specifically 28.54 ± 18.84% for an initial PCT concentration of 31.45 mg/L. Furthermore, the pH levels of the anode environment were observed to influence PCT degradation, with the highest degradation rate recorded at 48.69 ± 0.86% at a pH of 8.2. In this study, the highest average power density reached was 1174.42 mW/m2 with an external resistance of 1000 Ω at an initial PCT concentration of 31.45 mg/L. Microbial community analysis was conducted, revealing that Burkholderia sp. dominated the reactor containing PCT. These findings offer valuable insights for the development of more efficient technologies for the removal of PCT from pharmaceutical wastewater using natural microbial communities.

This work was aimed to characterize functional and biochemical parameters of a bakery ingredient prepared with durum wheat by-products (micronized bran and middling) fermented by a selected microbial consortium composed of yeasts and lactic acid bacteria. The unfermented milling by-products mixture and the mixture fermented by a baker’s yeast were used as reference. The innovative ingredient showed more stable colour indexes compared to the references, a more complex profile in volatile molecules characterized by a higher presence of alcohols, ketones and acids compared to the references. A significant increase in the content of peptides, short chain fatty acids, total phenols, antioxidant activity and prebiotic activity together with a reduction in phytic acid content was observed in the samples fermented by the selected microbial consortium compared to the references. This work provides information on the impact of lactic acid bacteria and yeasts on functional and biochemical characteristics of fermented milling by-products.

Recent advances in the microbial degradation of persistent organic pollutants have the potential to mitigate the damage caused by anthropogenic activities that are harmfully impacting agriculture soil ecosystems and human health. In this paper, we summarize the pollution characteristics of neonicotinoid insecticides (NNIs) in agricultural fields in China and other countries and then discuss the existing research on screening for NNI-degrading functional bacterial strains, their degradation processes, the construction of microbial consortia, and strategies for their application. We explore the current needs and solutions for improving the microbial remediation rate of NNI-contaminated soil and how these solutions are being developed and applied. We highlight several scientific and technological advances in soil microbiome engineering, including the construction of microbial consortia with a broad spectrum of NNI degradation and microbial immobilization to improve competition with indigenous microorganisms through the provision of a microenvironment and niche suitable for NNI-degrading bacteria. This paper highlights the need for an interdisciplinary approach to improving the degradation capacity and in situ survival of NNI-degrading strains/microbial consortia to facilitate the remediation of NNI-contaminated soil using strains with a broad spectrum and high efficiency in NNI degradation.

The presence of diverse carbohydrate-active enzymes (CAZymes) is crucial for the direct bioconversion of lignocellulose. In this study, various anaerobic microbial consortia were employed for the degradation of 10 g/L of minimally pretreated corncob. The involvement of lactic acid bacteria (LAB) and a CAZyme-rich bacterium (Bacteroides cellulosilyticus or Paenibacillus lautus) significantly enhanced the lactic acid production by Ruminiclostridium cellulolyticum from 0.74 to 2.67 g/L (p < 0.01), with a polysaccharide conversion of 67.6%. The supplement of a commercial cellulase cocktail, CTec 2, into the microbial consortia continuously promoted the lactic acid production to up to 3.35 g/L, with a polysaccharide conversion of 80.6%. Enzymatic assays, scanning electron microscopy, and Fourier transform infrared spectroscopy revealed the substantial functions of these CAZyme-rich consortia in partially increasing enzyme activities, altering the surface structure of biomass, and facilitating substrate decomposition. These results suggested that CAZyme-intensified consortia could significantly improve the levels of bioconversion of lignocellulose. Our work might shed new light on the construction of intensified microbial consortia for direct conversion of lignocellulose.

Wheat straw (WS) is a promising substrate for biogas production by anaerobic digestion (AD) due to its high carbohydrate content. An estimated 0.603 million t yr−1 of WS are generated from wheat production systems in South Africa. This is equivalent to an energy potential of 11 PJ. Despite this, WS is still undervalued as a bioenergy resource in South Africa due to its structural complexity and low nitrogen content. WS disposal methods, such as use in livestock bedding, burning and burying into the soil, inter alia, are not sustainable and may contribute to global warming and climate change. The commercialization of the AD of WS needs to be further developed and promoted. Pre-treatment (i.e., physical, chemical, biological and hybrid methods) and anaerobic co-digestion (AcoD) are novel strategies that can support the conversion of WS into biogas and other value-added products. Current and future research should focus on optimizing pre-treatment and AcoD conditions towards industrialization of WS into valuable products. This paper focuses on the potential use of WS for biogas production in South Africa. The aim is to create information that will promote research and development, and encourage policy makers and stakeholders to participate and invest in WS biogas technology. Were WS biogas technology fully adopted, we believe that it would alleviate energy insecurity and environmental degradation, and sustain the livelihoods of citizens in South Africa.

Bacterial cellulose (BC) is emerging as an attractive large-scale polymer due to its superior properties. The dominant static culture for BC fermentation by bacteria or microbial consortium results in low productivity. Agitated culture, as an industrially projected technique, has been widely investigated but exclusively for cellulose-producing bacterial strains. Addressing this concern and evaluating the potential of residues as feedstock, this study highlights the utilization of microbial consortium BA2 and seven agro-industrial wastes including cocoa husks, sugarcane bagasse and others. Remarkably, rice bran (RB) appears as a promising substrate, achieving 2.14 g/L (dry basis) and outperforming the traditional HS medium, evident from a 15-day fermentation. A complex interplay between oxygen availability, glucose consumption and BC yield was revealed; while orbital and magnetic stirring with forced air ventilation (AFV) showed low BC yields and early biomass saturation, 4.07 g/L (dry basis) was targeted by magnetic stirring at 100 rpm from the start using only headspace air. However, beyond controlled operating conditions, mechanical agitation and favorable cellulose adhesion to metal in the stirred tank bioreactor negatively affect BC yield. This pattern uncovers the need for a further approach to the design of bioreactors when the microbial consortium is considered.

Background. In the last decades, humanity has faced the challenge of finding new ways to obtain renewable, environmentally friendly energy carriers. Hydrogen is one of such energy carriers; however, the current methods of its production require fossil fuels and are accompanied by significant CO2 emissions. Consequently, the energy costs needed to obtain hydrogen by electrolysis exceed the amount of energy produced by burning the hydrogen. Simultaneously, the hydrogen yields for alternative ways, such as fermentation, remain low. Objective. The aim of the work is the development of approaches to intensify the biohydrogen obtaining process from agricultural waste. Methods. An increase in hydrogen yield was achieved using specifically grown microorganisms of the Clostridium spp. A combination of the waste fermentation process with the production of hydrogen in a microbial fuel cell (MFC), which was fed with the liquid fraction after fermentation, was employed. Results. The yield of hydrogen depends on the component composition of the raw material. Higher lignin content in the raw material reduces the yield of hydrogen. The addition of Clostridium spp. to the natural consortium in the amount of 10% of the total inoculum led to an increase in hydrogen yield. The combination of two processes – fermentation and hydrogen production in a MFC – increased the yield of hydrogen by 1.7 times, along with a higher degree of organic raw materials utilization. Conclusions. The additional introduction of Clostridium spp. to the hydrogen-producing consortium leads to a 7–10% increase in the yield of hydrogen, depending on the composition of the raw material. The yield of hydrogen obtained in the fermentation process for the substrate containing corn silage is 12 ± 1% higher than for the wheat straw. In general, the combination of the fermentation and hydrogen production in the MFC in a two-stage process leads to an overall increase in the yield of hydrogen by 60 ± 5%.

Sugarcane leaf waste, a byproduct of the growing global sugar industry, challenges agricultural waste management. This study explores its potential for methane production via anaerobic digestion. A microbial pre-hydrolysis, using lignocellulose-degrading bacteria, enhanced soluble chemical oxygen demand at an optimal initial substrate concentration of 40 g-volatile solid/L. Comparative analysis with untreated and bioaugmented leaves revealed the pre-hydrolyzed leaves achieved the highest methane production rate (MPR) at 14.0 ± 0.5 mL-CH4/L·d, surpassing others by 1.47 and 1.67 times. Two continuous stirred tank reactors were employed to assess the optimal hydraulic retention time (HRT). Results showed a stable methane production with an HRT of 25 days, yielding high MPRs: 88.70 ± 0.63 mL-CH4/L·d from pre-hydrolyzed sugarcane leaves and 82.57 ± 1.22 mL-CH4/L·d from microbial consortium-augmented leaves. A 25-day HRT fosters high microbial diversity with Bacteroidota, Firmicutes, Chloroflexi, and Verrucomicrobiota dominance, indicating favorable conditions. Conversely, a 20-day HRT results in lower diversity due to unfavorable factors like low pH during organic overloading, leading to increased concentrations of volatile fatty acids and lactic acid, with Firmicutes as the predominant phylum. This study highlights sugarcane leaf waste's potential as a valuable resource for sustainable methane production.

Constant industrial development has increased chromium use, resulting in chromium discharge into wastewater. The implementation of microbial bioremediation has been proposed as an ecological, efficient and economical alternative for the use of microorganisms to reduce chromium to a less toxic form. Our objective was to evaluate the Cr (VI) removal capacity of microbial consortia at different concentrations. Accordingly, an activation and identification of microorganisms from chromium-containing wastewater was carried out. Seven microbial consortia were established and their synergy, individual and consortium growth curves were evaluated. Subsequently, a scaled adaptation of the consortia was carried out with eight concentrations of Cr (VI). Reciprocal regression models and growth curves were used to identify the consortium with the highest removal. Synergy was found in the consortia evaluated; growth curves of consortia showed higher absorbance than individually, with higher absorption in the Candida famata-Serratia sp. consortium. However, in the scaled adaptation, greater Cr (VI) reduction capacity was demonstrated in Candida tropicalisSerratia sp. with 79.20% at a concentration of 100 ppm with a total chromium reduction of 31.12%. At the same time, a greater adaptation of the consortia to high concentrations of Cr (VI) was identified. This is the first research to report C. tropicalis-Serratia sp. microbial consortium with a positive interaction and higher metabolic reduction capacity, which will have a positive impact on bioremediation of chromium-containing wastewater. [ABSTRACT FROM AUTHOR]

Simple Summary: Several large tanneries operate in Saudi Arabia. The tanneries produce more than 15,000 pieces of leather per day and 200 metric tons of wastewater per day. Leather manufacturing is a highly polluting activity throughout the world, and in many places, it is not known how efficient the wastewater treatments in the factories are. This was found to be the case in Saudi Arabia, where we revealed insufficient treatments in all four of the factories that we studied. We propose here an additional biological treatment using a bacterial–fungal consortium. Bacteria and fungi were isolated from tannery wastewaters, and their collagenase and gelatinase activities were measured to discover their potential to clean tannery wastewater. Different single bacteria and fungi and their consortia were used in the experiment to find the most suitable species for the treatment. The treatment appeared to be efficient, reducing almost all parameters to below the environmental regulation limit for wastewater discharge to the environment in Saudi Arabia. Environmental pollutants such as toxic heavy metals and oxygen-demanding solids are generated by leather manufacturing. In most tanneries, wastewaters are treated with physico-chemical methods but overly high levels of pollutants remain in surface waters. The efficiency of tanning wastewater treatment with conventional techniques was evaluated in four tanneries in Saudi Arabia. It was observed that the wastewaters contained high amounts of pollutants, needing further treatment. We isolated microorganisms from the wastewaters and carried out experiments to treat the effluents with different bacteria, fungi, and their consortia. We hypothesized that a consortium of microorganisms is more efficient than the single microorganisms in the consortium. The efficiency of five single bacterial and five fungal species from different genera was tested. In a consortium experiment, the efficiency of nine bacterial–fungal consortia was studied. The bacterium Corynebacterium glutamicum and the fungus Acremonium sp. were the most efficient in the single-microbe treatment. In the consortium treatment, the consortium of these two was the most efficient at treating the effluent. The factory wastewater treatment reduced total dissolved solids (TDS) from 1885 mg/L to 880 mg/L. C. glutamicum treatment reduced TDS to 150 mg/L and Acremonium sp. to 140 mg/L. The consortium of these two reduced TDS further to 80 mg/L. Moreover, the factory treatment reduced BOD from 943 mg/L to 440 mg/L, C. glutamicum to 75 mg/L, and Acremonium sp. 70 mg/L. The consortium reduced BOD further to 20 mg/L. The total heavy-metal concentration (Cd, Cr, Cu, Mn, and Pb) was reduced by the factory treatment from 43 μg/L to 26 μg/L and by the consortium to 0.2 μg/L. The collagen concentration that was studied using hydroxyproline assay decreased from 120 mg/L to 39 mg/L. It was shown that the consortium of the bacterium C. glutamicum and the fungus Acremonium sp. was more efficient in reducing the pollutants than the single species. The consortium reduced almost all parameters to below the environmental regulation limit for wastewater discharge to the environment in Saudi Arabia. The consortium should be studied further as an additional treatment to the existing conventional tannery wastewater treatments. [ABSTRACT FROM AUTHOR]

Abstract Petroleum hydrocarbon contamination is of environmental and public health concerns due to its toxic components. Bioremediation utilizes microbial organisms to metabolism and remove these contaminants. The aim of this study was to enrich a microbial community and examine its potential to degrade petroleum hydrocarbon. Through successive enrichment, we obtained a bacterial consortium using crude oil as sole carbon source. The 16 S rRNA gene analysis illustrated the structural characteristics of this community. Metagenomic analysis revealed the specific microbial organisms involved in the degradation of cyclohexane and all the six BTEX components, with a demonstration of the versatile metabolic pathways involved in these reactions. Results showed that our consortium contained the full range of CDSs that could potentially degrade cyclohexane, benzene, toluene, and (o-, m-, p-) xylene completely. Interestingly, a single taxon that possessed all the genes involved in either the activation or the central intermediates degrading pathway was not detected, except for the Novosphingobium which contained all the genes involved in the upper degradation pathway of benzene, indicating the synergistic interactions between different bacterial genera during the hydrocarbon degradation.

Soil microorganisms play an important role on plant development and the homogenization of soil microbiomes is harmful to agri-environments. It is essential that agricultural practices are carried out by taking soil microbiome preservation in consideration. Agroforestry systems are one of the most environmentally friendly agrosystems and its plant diversity directly influences the soil microbiome diversity. In this study, we tested the efficacy of the microbial consortium (MC) obtained from compost and the cyanobacteria Arthrospira platensis (Ap) compared with the application of the vermicompost tea (VT) and bokashi (Bk) in arugula, lettuce, beetroot, and carrot in two seasons in a recently implemented agroforestry system. We aimed to verify if MC and Ap could be new promising sustainable alternatives in vegetables production. The strategy can be broken down into three stages: (1) Green manure management: planting, cutting, griding, and incorporation in the soil, (2) agroforestry system implementation, and (3) treatment application in a completely randomized blocks design. The vegetables yield was measured. Nutritional traits and the plant root system were evaluated for arugula and lettuce. Greater plant yield, nutritional values, and plant root development were observed in the MC-treated plants; Ap and Bk had, in general, similar results. Our data show that both MC and Ap have potential to become a sustainable product for agricultural production.

A laboratory pot experiment (Experiment 1) was conducted to determine the optimal ratio of groundnut haulm and shell as composting substrates. The aim was to identify the most effective combination for rapid decomposition under in vivo conditions. The experiment was carried out in 2022, from May to July, using a completely randomized design (CRD) with 6 treatments that were replicated 4 times. The treatment combinations in the pot experiment were as follows: T1: haulm + shell (1:1), T2: haulm + shell (2:1), T3: haulm + shell (3:1), T4: T1 + Cn, T5: T2 + Cn, and T6: T3 + Cn. Here, Cn refers to the cellulose-degrading efficient microbial consortium containing bacterial strains Priestia megaterium DBJ6, Micrococcus yunnanensis DMB9, and fungal strains Aspergillus foetidus DAJ2, Trichoderma atrobrunnium DTJ4, and Phanerochaete chrysosporium CBS129.27. Based on the results (results of chemical and biological properties) of the pot experiment, treatment T6 was considered the best treatment (the C/N ratio was 14.36 ± 0.444 after three months of decomposition) for further study under in vivo conditions. The in vivo experiment (Experiment 2) was conducted at the Jaguli Instructional Farm of Bidhan Chandra Krishi Viswavidyalaya, West Bengal, India, during the months of August to October in both 2022 and 2023 with two treatments: the normal composting treatment (NC) and the rapid composting treatment (RC). The findings of Experiment 2 showed that organic substrates degraded more quickly (within 90 days) during rapid composting, as evidenced by a decrease in the C/N ratio to below 15 (14.32 and 13.97 on day 90 in 2022 and 2023, respectively). Whereas, normal composting required more than 90 days to achieve a C/N ratio below 20 (23.80 and 23.15 on day 90 in 2022 and 2023, respectively). The RC treatment also showed a higher microbial population and enzyme activity compared to the NC treatment. Therefore, according to the results of this experiment, it can be concluded that the inoculation of the microbial consortium was more beneficial for accelerating the composting process under the same composting circumstances and substrate ratio.

In this work, it is presented a first approach of a mathematical and kinetic analysis for improving the decoloration and further degradation process of an azo dye named acid red 27 (AR27), by means of a novel microbial consortium formed by the fungus Trametes versicolor and the bacterium Pseudomonas putida. A multivariate analysis was carried out by simulating scenarios with different operating conditions and developing a specific mathematical model based on kinetic equations describing all stages of the biological process, from microbial growth and substrate consuming to decoloration and degradation of intermediate compounds. Additionally, a sensitivity analysis was performed by using a factorial design and the Response Surface Method (RSM), for determining individual and interactive effects of variables like, initial glucose concentration, initial dye concentration and the moment in time for bacterial inoculation, on response variables assessed in terms of the minimum time for: full decoloration of AR27 (R1 = 2.375 days); maximum production of aromatic metabolites (R2 = 1.575 days); and full depletion of aromatic metabolites (R3 = 12.9 days). Using RSM the following conditions improved the biological process, being: an initial glucose concentration of 20 g l-1, an initial AR27 concentration of 0.2 g l-1 and an inoculation moment in time of P. putida at day 1. The mathematical model is a feasible tool for describing AR27 decoloration and its further degradation by the microbial consortium of T. versicolor and P. putida, this model will also work as a mathematical basis for designing novel bio-reaction systems than can operate with the same principle of the described consortium.

The present study was carried out in a pot experiment to examine the bioefficacy of three biocontrol agents, viz., Trichoderma viride, Bacillus subtilis, and Pseudomonas fluorescens, either alone or in consortium, on plant growth promotion and activation of defense responses in potato against the early blight pathogen Alternaria solani. The results demonstrate significant enhancement in growth parameters in plants bioprimed with the triple-microbe consortium compared to other treatments. In potato, the disease incidence percentage was significantly reduced in plants treated with the triple-microbe consortium compared to untreated control plants challenged with A. solani. Potato tubers treated with the consortium and challenged with pathogen showed significant activation of defense-related enzymes such as peroxidase (PO) at 96 h after pathogen inoculation (hapi) while, both polyphenol oxidase (PPO), and phenylalanine ammonia-lyase (PAL) at 72 hapi, compared to the individual and dual microbial consortia-treated plants. The expression of antioxidant enzymes like superoxide dismutase (SOD) and catalase (CAT) and the accumulation of pathogenesis-related proteins such as chitinase and β-1,3-glucanase were observed to be highest at 72 hapi in the triple microbe consortium as compared to other treatments. HPLC analysis revealed significant induction in polyphenolic compounds in triple-consortium bioprimed plants compared to the control at 72 hapi. Histochemical analysis of hydrogen peroxide (H2O2) clearly showed maximum accumulation of H2O2 in pathogen-inoculated control plants, while the lowest was observed in triple-microbe consortium at 72 hapi. The findings of this study suggest that biopriming with a microbial consortium improved plant growth and triggered defense responses against A. solani through the induction of systemic resistance via modulation of the phenylpropanoid pathway and antioxidative network.

Environmental contamination by petroleum hydrocarbons is of concern due to the carcinogenicity and neurotoxicity of these compounds. Successful bioremediation of organic contaminants requires bacterial populations with degradative capacity for these contaminants. Through successive enrichment of microorganisms from a petroleum-contaminated soil using diesel fuel as the sole carbon and energy source, we successfully isolated a bacterial consortium that can degrade diesel fuel hydrocarbons. Metagenome analysis revealed the specific roles of different microbial populations involved in the degradation of benzene, toluene, ethylbenzene and xylene (BTEX), and the metabolic pathways involved in these reactions. One hundred and five putative coding DNA sequences were identified as responsible for both the activation of BTEX and central metabolism (ring-cleavage) of catechol and alkylcatechols during BTEX degradation. The majority of the Coding DNA sequences (CDSs) were affiliated to Acidocella, which was also the dominant bacterial genus in the consortium. The inoculation of diesel fuel contaminated soils with the consortium resulted in approximately 70% hydrocarbon biodegradation, indicating the potential of the consortium for environmental remediation of petroleum hydrocarbons.

Phenanthrene (PHE) is one of the model compounds of polycyclic aromatic hydrocarbons (PAHs). In this study, a natural PHE-degrading microbial consortium, named HJ-SH, with very high degradation efficiency was isolated from soil exposed to long-term PHE contamination. The results of GC analysis showed that the consortium HJ-SH degraded 98% of 100 mg/L PHE in 3 days and 93% of 1000 mg/L PHE in 5 days, an efficiency higher than that of any other natural consortia, and even most of the engineered strains and consortia reported so far. Seven dominating strains were isolated from the microbial consortium HJ-SH, named SH-1 to SH-7, which were identified according to morphological observation and 16S rDNA sequencing as Pseudomonas sp., Stenotrophomonas sp., Delftia sp., Pseudomonas sp., Brevundimonas sp., Curtobacterium sp., and Microbacterium sp., respectively. Among all the seven single strains, SH-4 showed the strongest PHE degradation ability, and had the biggest degradation contribution. However, it is very interesting that the microbial consortium can hold its high degradation ability only with the co-existence of all these seven single strains. Moreover, HJ-SH exhibited a very high tolerance for PHE, up to 4.5 g/L, and it can degrade some other typical organic pollutants such as biphenyl, anthracene, and n-hexadecane with the degradation ratios of 93%, 92% and 70%, respectively, under 100 mg/L initial concentration in 5 days. Then, we constructed an artificial consortium HJ-7 consisting of the seven single strains, SH-1 to SH-7. After comparing the degradation ratios, cell growth, and relative degradation rates, it was concluded that the artificial consortium HJ-7 with easier reproducibility, better application stability, and larger room for modification can largely replace the natural consortium HJ-SH. In conclusion, this research provided novel tools and new insights for the bioremediation of PHE and other typical organic pollutants using microbial consortia. [ABSTRACT FROM AUTHOR]

After polymer flooding, substantial oil and residual polymers remain in reservoirs, leading to plugging and reduced recovery. MEOR (Microbial Enhanced Oil Recovery) aims to release trapped oil by utilizing microorganisms and their byproducts. The microorganisms can use residual HPAM (hydrolyzed polyacrylamide) as an energy source for polymer degradation, addressing reservoir plugging issues and improving oil recovery. However, microorganisms are sensitive to environmental conditions. This paper presents a detailed update of MEOR, including microbial products, mechanisms, and merits and demerits. The effect of the displacement fluid and conditions on microorganisms is thoroughly demonstrated to elucidate their influencing mechanism. Among these factors, HPAM and crosslinkers, which have significant biological toxicity, affect microorganisms and the efficiency of MEOR. Limited research exists on the effect of chemicals on microorganisms' properties, metabolism, and oil displacement mechanisms. The development of microbial consortium, their metabolic interaction, and oil displacement microprocesses are also discussed. In addition, prior studies lack insights into microorganisms' interaction and mechanisms using chemicals. Finally, field trials exist to examine the microbial consortium's efficiency and introduce new technologies. This review mainly explores the influencing factors on microorganisms, and confirms the credibility of MEOR after polymer flooding, providing a scientific basis for improving the theory of MEOR. [ABSTRACT FROM AUTHOR]

Xanthan is an extracellular heteropolysaccharide produced by the bacteria Xanthomonas campestris. Due to its unique properties, the polysaccharide and its derivatives are widely used in many industries, from food to biomedicine and oil production, that demands an efficient xanthan depolymerization method to adapt this polysaccharide for various applications. Unlike the known chemical approaches, biological methods are considered to be more environmentally friendly and less energy intensive. In laboratory conditions, we have isolated a bacterial community capable of reducing the xanthan viscosity. Identification of the individual isolates in the microbial community and their testing resulted in the consortium LE-C1, consisting of two microorganisms Paenibacillus phytohabitans KG5 and Cellulosimicrobium cellulans KG3. The specific activities of the overall xanthanase and auxiliary enzymes that may be involved in the xanthan depolymerization were as follows: xanthanase, 19.6 ± 0.6 U/g; β-glucosidase, 3.4 ± 0.1 U/g; α-mannosidase, 68.0 ± 2.0 U/g; β-mannosidase, 0.40 ± 0.01 U/g; endo-glucanase, 4.0 ± 0.1 U/g; and xanthan lyase, 2.20 ± 0.07 U/mg. In order to increase the efficiency of xanthan biodegradation, the LE-C1 whole cells were immobilized in a poly(vinyl alcohol) cryogel. The resulting regenerative biocatalyst was able to complete xanthan depolymerization within 40 cycles without loss of activity or degradation of the matrix. [ABSTRACT FROM AUTHOR]

Biotic stress management through bio-priming is a common practice among the farmers of the Indo-Gangetic Plains. However, this indigenous technology is less explored for the sustainable management of soil resources. Therefore, field-based experiments (2016–17 and 2017–18) were conducted in Varanasi to evaluate the combined effect of seedling bio-priming and fertilization on biochemical properties, microbiological properties, and fertility of red cabbage soil at harvest. Based on the farmers' fertilization practice, the recommended dose of fertilizers (RDF) of N:P2O5:K2O were applied @ 120:60:60 kg ha−1. Three compatible bio-agents, viz., Trichoderma harzianum, Pseudomonas fluorescens, and Bacillus subtilis were applied alone and in combination with 75% RDF. The effect of treatment combinations was also analyzed for carbon (C) mineralization by conducting an incubation experiment for 90 days. Bio-priming treatments recorded a higher richness of soil microflora and soil fertility than control and sole application of chemical fertilizers. Application of 75% RDF + T. harzianum + P. fluorescens resulted in highest urease and cellulase activities and soil organic C. Inclusion of dual-species bacterial consortium (P. fluorescens and B. subtilis) in integrated system resulted in highest dehydrogenase activity and available P. These priming agents also exhibited significantly higher CO2 fluxes and C mineralization in our incubation study. A microbial consortium of T. harzianum and B. subtilis increased the microbial biomass C and available K. Although application of triple-species consortium improved C mineralization in laboratory conditions, the positive effects lowered down in field conditions. As a bottom-up approach, customization of bio-priming technology among farmers will help in attaining the UN-Sustainable Development Goals. [ABSTRACT FROM AUTHOR]

Abiotic and biotic stresses have a major impact on crop growth. Stress affects the root system and decreases the amount of nutrients in fruits. Modern agricultural technologies help replace mineral fertilizers with new generation biopreparation. Unlike chemical fertilizers, biofertilizers reduce the risk of adverse environmental impacts. Of special interest are extremophilic microorganisms able to survive in extreme conditions. We aimed to study the phytostimulating ability of extremophilic bacteria isolated from disturbed lands in the coal-mining region. We isolated microorganisms from disturbed lands and studied their cultural, morphological, and biochemical properties. Then, we determined their ability to synthesize indole-3-acetic acids. The extremophilic bacteria were identified and subjected to biocompatibility testing by co-cultivation. Next, we created consortia of pure cultures and analyzed biomass growth. Finally, the biopreparation was experimentally tested on Trifolium prantense L. seeds. We isolated 10 strains of microorganisms that synthesized 4.39 to 16.32 mg/mL of indole-3-acetic acid. The largest amounts of the acid were produced by Pantoea spp., Enterococcus faecium, Leclercia spp., Rothia endophytica, and Klebsiella oxytoca. A consortium of Pantoea spp., E. faecium, and R. endophytica at a ratio of 1:1:1 produced the largest amount of indole-3-acetic acid (15.59 mg/mL) and accumulated maximum biomass. The addition of 0.2% L-tryptophan to the nutrient medium increased the amount of indole-3-acetic acid to 18.45 mg/mL. When the T. prantense L. seeds were soaked in the biopreparation (consortium’s culture fluid) at a concentration of 2.5, the sprouts were 1.4 times longer on the 10th day of growth, compared to the control. The consortium of Pantoea spp., E. faecium, and R. endophytica (1:1:1) stimulated the growth of T. prantense L. seeds. Our findings can be further used to develop biofertilizers for agriculture.

Abstract The difficulty of degrading lignin is the main factor limiting the high-value conversion process of lignocellulosic biomass. The biodegradation of lignin has attracted much attention because of its strong environmental friendliness, but it still faces some dilemmas such as slow degradation rate and poor adaptability. The microbial consortia with high lignin degradation efficiency and strong environmental adaptability were obtained in our previous research. To further increase the lignin degradation efficiency, this paper proposes a composite treatment technology of steam explosion combined with microbial consortium degradation to treat three kinds of biomass. We measured the lignin degradation efficiency, selectivity value (SV) and enzymatic saccharification efficiency. The structural changes of the biomass materials and microbial consortium structure were also investigated. The experimental results showed that after 1.6 MPa steam explosion treatment, the lignin degradation efficiency of the eucalyptus root reached 35.35% on the 7th days by microbial consortium. At the same time, the lignin degradation efficiency of the bagasse and corn straw treated by steam explosion followed by microbial biotreatment was 37.61–44.24%, respectively, after only 7 days of biotreatment. The microbial consortium also showed strong selectivity degradation to lignin. The composite treatment technology can significantly improve the enzymatic saccharification efficiency. Saccharomycetales, Ralstonia and Pseudomonadaceae were the dominant microorganisms in the biomass degradation systems. It was proved that the combined treatment technology of steam explosion and microbial consortium degradation could overcome the drawbacks of traditional microbial pretreatment technology, and can facilitate the subsequent high-value conversion of lignocellulose.

Assembling functional bacterial biocontrol consortia is expected to expand the scope and efficiency of biocontrol agents. Generally, bacterial interspecies interactions lead to incompatibility events, as bacteria can produce antibacterial compounds and/or assemble contact-dependent killing (CDK) devices. Here, we aimed to assemble a bacterial consortium comprising Lysobacter enzymogenes OH11 and Bacillus safensis ZK-1 for the synergistic control of bacterial and fungal diseases of kiwifruit. ZK-1, a native kiwifruit biocontrol bacterium, is effective against Pseudomonas syringae pv. actinidiae (Psa) that causes bacterial kiwifruit canker, but has weak antifungal activity. OH11 is a foreign kiwifruit biocontrol agent with strong antifungal activity. While OH11 was unable to produce anti-Gram-negative metabolites, this strain could utilize type IV secretion system as an antibacterial CDK weapon. We first observed that OH11 could inhibit growth of ZK-1 by generating diffusible anti-Gram-positive antibiotic WAP-8294A2, whereas ZK-1 failed to generate diffusible antibacterial compound to inhibit growth of OH11. To disrupt this interspecies incompatibility, we generated a transgenic OH11-derived strain, OH11W, by deleting the WAP-8294A2 biosynthetic gene and found that OH11W did not kill ZK-1. We further observed that when OH11W and ZK-1 were co-inoculated on agar plates, no CDK effect was observed between them, whereas co-culture of OH11W or ZK-1 with Psa on agar plates resulted in Psa killing, suggesting L. enzymogenes and B. safensis assemble antibacterial CDK weapons against bacterial pathogens, and these CDK weapons did not affect the compatibility between OH11W and ZK-1. Based on these findings, we assembled an OH11W/ZK-1 dependent consortium that was shown to be functional in controlling bacterial canker and several representative fungal diseases of kiwifruit.

Anthropogenic factors expose agricultural plants to abiotic and biotic stresses, one of which is oxidative stress. Oxidative stress changes cell metabolism, as well as inhibits plant growth and development. Microbial treatment is an environmentally safe method of oxidative stress prevention. The research objective was to study the antioxidant activity of microflora native to coal dumps in order to combat the oxidative stress in crops. The study featured microorganisms isolated from technogenically disturbed soils. Pure bacterial cultures were isolated by deep inoculation on beef-extract agar. A set of experiments made it possible to define the cultural, morphological, and biochemical properties of cell walls. The antioxidant activity and the amount of indole-3-acetic acid were determined on a spectrophotometer using the ABTS reagent and the Salkowski reagent, respectively. The isolated microorganisms were identified on a Vitek 2 Compact device. The biocompatibility of strains was tested by dripping, while the increase in biomass was measured using a spectrophotometer. The study revealed ten microbial strains with antioxidant activity ranging from 67.21 ± 3.08 to 91.05 ± 4.17%. The amount of indole-3-acetic acid varied from 8.91 ± 0.32 to 15.24 ± 0.69 mg/mL. The list of microorganisms included Klebsiella oxytoca, Enterobacter aerogenes, Pseudomonas putida, and Bacillus megaterium. The consortium of P. putida and E. aerogenes demonstrated the best results in antioxidant activity, indole-3-acetic acid, and biomass. Its ratio was 2:1 (94.53 ± 4.28%; 15.23 ± 0.56 mg/mL), while the optical density was 0.51 ± 0.02. Extra 2% glycine increased the antioxidant activity by 2.34%, compared to the control. Extra 0.5% L-tryptophan increased the amount of indole-3-acetic acid by 3.12 mg/mL and the antioxidant activity by 2.88%. The research proved the antioxidant activity of strains isolated from microflora native to coal dumps. The consortium of P. putida and E. aerogenes (2:1) demonstrated the best results. Further research will define its ability to reduce oxidative stress in plants.