109 results on '"Purać, Jelena"'
Search Results
2. Spermidine supplementation influence on protective enzymes of Apis mellifera (Hymenoptera: Apidae).
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Čelić, Tatjana V, Đorđievski, Srđana, Vukašinović, Elvira L, Pihler, Ivan, Kojić, Danijela, and Purać, Jelena
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BIOMARKERS ,SPERMIDINE ,DIETARY supplements ,APIDAE ,OXIDATIVE stress ,HONEYBEES ,BEES - Abstract
Dietary supplementation has been proposed as a sustainable way to improve the health and resilience of honey bees (Apis mellifera , L.), as the decline in their numbers in recent decades has raised scientific, environmental, and economic concerns. Spermidine, a natural polyamine, has been shown to be a promising substance for honey bee supplementation, as its health-promoting effects have been demonstrated in numerous studies and in different organisms. As already shown, supplementation with spermidine at a certain concentration prolonged lifespan, reduced oxidative stress, and increased antioxidative capacity in honey bees. The aim of the present study was to investigate whether spermidine supplementation affects gene expression and/or enzyme activity of antioxidative and detoxification enzymes and immune response markers in honey bee workers. The different gene expression and enzyme activity patterns observed in abdominal and head tissues in response to spermidine supplementation suggest tissue-specific and concentration-dependent effects. In addition, the immune response markers suggest that spermidine has the ability to boost honey bee immunity. The observed changes make a valuable contribution to understanding the molecular mechanisms by which spermidine may exert its beneficial effects on the bee's health and lifespan. These results support the idea of the use of spermidine supplementation to promote bee health and resilience to environmental stressors, emphasizing that the dose must be carefully chosen to achieve a balance between the pro- and antioxidant effects of spermidine. [ABSTRACT FROM AUTHOR]
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- 2024
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3. The effect of long term exposure to cadmium on Ostrinia nubilalis growth, development, survival rate and oxidative status
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Vukašinović, Elvira L., Čelić, Tatjana V., Kojić, Danijela, Franeta, Filip, Milić, Stanko, Ninkov, Jordana, Blagojević, Duško, and Purać, Jelena
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- 2020
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4. Management of inorganic elements by overwintering physiology of cold hardy larvae of European corn borer (Ostrinia nubilalis, Hbn.)
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Vukašinović, Elvira, Vukašinović, Elvira, Popović, Željko, Ninkov, Jordana, Čelić, Tatjana, Uzelac, Iva, Kojić, Danijela, Purać, Jelena, Vukašinović, Elvira, Vukašinović, Elvira, Popović, Željko, Ninkov, Jordana, Čelić, Tatjana, Uzelac, Iva, Kojić, Danijela, and Purać, Jelena
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The European corn borer (Ostrinia nubilalis, Hbn.), enters diapause, a strategy characterized by arrest of development and reproduction, reduction of metabolic rate and the emergence of increased resistance to challenging seasonal conditions as low sub-zero winter temperatures. The aim of this study was to investigate the potential role of inorganic elements in the ecophysiology of O. nubilalis, analysing their content in the whole body, hemolymph and fat body, both metabolically active, non-diapausing and overwintering diapausing larvae by ICP-OES spectrometer following the US EPA method 200.7:2001. O nubilalis as many phytophagous lepidopteran species maintain a very low extracellular sodium concentration and has potassium as dominant cation in hemolymph of their larvae. Changes in hemolymph and the whole body sodium content occur already at the onset of diapause (when the mean environmental temperatures are still high above 0 ºC) and remain stable during the time course of diapause when larvae of this species cope with sub-zero temperatures, it seems that sodium content regulation is rather a part of diapausing program than the direct effect of exposure to low temperatures. Compared to non-diapausing O. nubilalis larvae, potassium levels are much higher in the whole body and fat body of diapausing larvae and substantially increase approaching the end of diapause. The concentration of Ca, Mg, P and S differed in the whole body, hemolymph and fat body between non-diapausing and diapausing larvae without a unique trend during diapause, except an increase in their contents at the end of diapause.
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- 2024
5. Spermidine supplementation in honey bees: Autophagy and epigenetic modifications.
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Kojić, Danijela, Spremo, Jelena, Đorđievski, Srđana, Čelić, Tatjana, Vukašinović, Elvira, Pihler, Ivan, and Purać, Jelena
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HONEYBEES ,POLYAMINES ,SPERMIDINE ,AUTOPHAGY ,EPIGENETICS ,CELL physiology - Abstract
Polyamines (PAs), including putrescine (Put), spermidine (Spd), and spermine (Spm), are essential polycations with wide-ranging roles in cellular functions. PA levels decline with age, making exogenous PA supplementation, particularly Spd, an intriguing prospect. Previous research in honey bees demonstrated that millimolar Spd added to their diet increased lifespan and reinforced oxidative resilience. The present study is aimed to assess the anti-aging effects of spermidine supplementation at concentrations of 0.1 and 1 mM in honey bees, focusing on autophagy and associated epigenetic changes. Results showed a more pronounced effect at the lower Spd concentration, primarily in the abdomen. Spd induced site-specific histone 3 hypoacetylation at sites K18 and 27, hyperacetylation at K9, with no change at K14 in the entire body. Additionally, autophagy-related genes (ATG3, 5, 9, 13) and genes associated with epigenetic changes (HDAC1, HDAC3, SIRT1, KAT2A, KAT6B, P300, DNMT1A, DNMT1B) were upregulated in the abdomens of honey bees. In conclusion, our findings highlight profound epigenetic changes and autophagy promotion due to spermidine supplementation, contributing to increased honey bee longevity. Further research is needed to fully understand the precise mechanisms and the interplay between epigenetic alterations and autophagy in honey bees, underscoring the significance of autophagy as a geroprotective mechanism. [ABSTRACT FROM AUTHOR]
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- 2024
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6. Effect of Cold Acclimation on Selected Metabolic Enzymes During Diapause in The European Corn Borer Ostrinia nubilalis (Hbn.)
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Uzelac, Iva, Avramov, Miloš, Čelić, Tatjana, Vukašinović, Elvira, Gošić-Dondo, Snežana, Purać, Jelena, Kojić, Danijela, Blagojević, Duško, and Popović, Željko D.
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- 2020
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7. The impact of sublethal concentrations of Cu, Pb and Cd on honey bee redox status, superoxide dismutase and catalase in laboratory conditions
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Nikolić, Tatjana V., Kojić, Danijela, Orčić, Snežana, Batinić, Darko, Vukašinović, Elvira, Blagojević, Duško P., and Purać, Jelena
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- 2016
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8. Exposure to high concentrations of cadmium which delay development of Ostrinia nubilalis Hbn. larvae affected the balance of bioelements
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Čelić, Tatjana, Čelić, Tatjana, Vukašinović, Elvira, Kojić, Danijela, Orčić, Snežana, Milić, Stanko, Vasin, Jovica, Purać, Jelena, Čelić, Tatjana, Čelić, Tatjana, Vukašinović, Elvira, Kojić, Danijela, Orčić, Snežana, Milić, Stanko, Vasin, Jovica, and Purać, Jelena
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All processes involved in metal homeostasis must be coordinated to provide sufficient, but not toxic, concentrations of important bioelements, and to minimize detrimental effects of toxic metals. Our previous studies dealing with the exposure of O. nubilalis non-diapausing larvae to dietary Cd demonstrated that exposure to higher concentrations of Cd caused delay in the development of larvae, induced oxidative stress and also induced defense mechanisms against the toxic effects of Cd. The aim of the present study was to evaluate how acute and chronic exposure of O. nubilalis larvae to increased concentrations of dietary Cd affected the balance of important bioelements. The concentration of bioelements was analyzed in larvae (after short-term exposure) and pupae (after long-term exposure). The short-term exposure of final instar larvae (L5) to Cd did not affect significantly the concentration of any of the analyzed bioelements, while the long-term exposure of developing larvae to higher concentrations of Cd caused increase in the concentrations of Ca, Mg and Na in pupae. The bioaccumulation factor, calculated for bioelements after long-term exposure to Cd, was higher for the most bioelements in groups fed with diet containing higher concentrations of Cd, except K which displayed the opposite trend. Pearson correlation coefficient showed positive correlations between Cd and Ca, Mg, Na, Fe, Cu and Zn, while negative correlation was observed between Cd and K. The results indicate that impact on the balance of important bioelements might be one of the mechanisms of cadmium toxicity and certainly raise numerous questions for future research.
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- 2022
9. Lea protein expression during cold-induced dehydration in the Arctic collembola Megaphorura arctica
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Popović Ž.D., Purać Jelena, Kojić Danijela, Pamer Elvira L., Worland M.R., Blagojević D.P., and Grubor-Lajšić Gordana
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Collembola ,cryoprotective dehydration ,LEA proteins ,SCP ,water ,Biology (General) ,QH301-705.5 - Abstract
The Arctic springtail Megaphorura arctica (Tullberg, 1876) employs a strategy known as cryoprotective dehydration to survive winter temperatures as low as -25°C. During cryoprotective dehydration, water is lost from the animal to ice in its surroundings as a result of the difference in vapour pressure between the animal’s supercooled body fluids and ice (Worland et al., 1998; Holmstrup and Somme, 1998). This mechanism ensures that as the habitat temperature falls, the concentration of solutes remains high enough to prevent freezing (Holmstrup et al., 2002). In M. arctica, accumulation of trehalose, a cryo/anhydro protectant, occurs in parallel with dehydration. Recent studies have identified a number of genes and cellular processes involved in cryoprotective dehydration in M. arctica (Clark et al., 2007; Clark et al., 2009; Purać et al., 2011). One of them includes late embryogenesis abundant (LEA) proteins. This study, together with that of Bahrndorff et al. (2008), suggests that LEA proteins may be involved in protective dehydration in this species.
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- 2011
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10. Efekti vodnog deficita i suficita na antioksidativni sistem zaštite kod dva hibrida kukuruza (Zea mays L.)
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Kukavica, Biljana, Purać, Jelena, Petri, Edward, Mišić, Danijela, Kojić, Danijela, Лукић, Наташа, Kukavica, Biljana, Purać, Jelena, Petri, Edward, Mišić, Danijela, Kojić, Danijela, and Лукић, Наташа
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Evidentne klimatske promene dovode do izmena ne samo u smislu zapremine već i raspodele padavina, pa su posledično sve češće smene perioda ekstremnih vodnih deficita i suficita. Vodni deficit i suficit utiču na rast i razvoj biljaka tako što dovode do inhibicije fotosinteze, oksidativnih oštećenja ćelijskih komponenti te promena u respiraciji. Cilj ove disertacije je bio da se utvrde efekti vodnog suficita i deficita na fiziološke, oksidativne i antioksidativne parametre kod dva hibrida kukuruza (ZP 555 i ZP 606). Vodnom suficitu su podvrgnute biljke u trajanju od 6, 24, 72 i 144 sati, a vodnom deficitu u trajanju od 8 i 15 dana, sa odgovarajućim kontrolnim biljkama. Listovi kontrolnih i tretiranih biljaka su korišteni za određivanje sledećih parametara: fizioloških (relativnog sadržaja vode (RWC), koncentracije fotosintetičkih pigmenata, solubilnih proteina, slobodnog prolina), oksidativnih (koncentracije malondialdehida – MDA i H2O2) i antiokdiativnih (neenzimskih - koncentracija polifenola, i enzimskih komponenti - aktivnosti antioksidativnih enzima: superoksid dismutase (SOD, EC 1.15.1.1), katalaze (CAT, EC 1.11.1.6), askorbat peroksidaze (APX, EC 1.11.1.11) i peroksidaza Klase III (POX, EC 1.11.1.7)). Rezultati dobijeni izlaganjem biljaka vodnom suficitu i deficitu su pokazali različit odgovor hibrida na poplavu i sušu i značajne interhibridne razlike kada je u odgovor na poplavu ili sušu. Promene u procesu fotosinteze su detektovane kroz promene koncentracije fotosintetičkih pigmenata. Pri uslovima vodnog suficita izmeren je porast koncentracije hlorofila a i b, te karotenoida kod hibrida ZP 555. Sa druge strane, smanjena koncentracija hlorofila b i karotenoida izmerena je kod hibrida ZP 606 nakon 24 sata vodnog suficita. Hibrid su imali istovetan odgovor na vodni deficit, gde je detektovano smanjenje koncentracije hlorofila a i karotenoida te povećanje koncentracije hlorofila b. Kao posledica vodnog suficita detektovana je i povećana koncentracij, Plants are continuously challenged by the rising incidence of drought and flooding as a consequence of global warming. These stresses may cause severe depression in the plant’s growth by inhibiting photosynthesis, inducing oxidative cell damage, and cell respiration changes. The present work aimed to study the effect of flooding and drought stress on physiological, oxidative, and antioxidative parameters in leaves of two maize hybrids (ZP 555 and ZP 606). Maize plants`leaves at the stage of three fully developed leaves were harvested after 6, 24, 72, and 144 hours of applied flooding stress and after 8 and 15 days after applied drought stress. Leaves from experimental plants and control plants were used for the determination of physiological (relative water content (RWC), the content of photosynthetic pigments and soluble proteins, proline), oxidative stress parameters (the content of malondialdehyde (MDA) and H2O2), as well as antioxidants (the total polyphenols content (Phe), and activity of antioxidative enzymes [catalase (CAT, EC 1.11.1.6), superoxide dismutase (SOD, EC 1.15.1.1), ascorbate peroxidases (APX, EC 1.11.1.11), and Class III peroxidases (POX, EC 1.11.1.7)]). Results indicated that drought and flooding stress-induced time-dependent changes of measured parameters and those hybrids differ in stress response. Changes in photosynthesis can be seen thought modifications in photosynthetic pigments concentration. An increase in the concentration of chlorophylls and carotenoids have been noted during flooding in ZP 555 hybrids. On the other hand, flooding stress decreased the chlorophyll b and carotenoid concentrations in ZP 606 hybrids. A decrease in the concentration of chlorophyll a and carotenoids and an increase in chlorophyll b concentration were a response of both examined hybrids on drought stress. Also, intensive protein synthesis was noted in both hybrids during flooding. More intensive oxidative stress levels were correlated with an i
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- 2021
11. Efekat zeolita na parametre antioksidativnog statusa kod paradajza (Solanum lycopersicum L.) i kukuruza (Zea mays L.) u uslovima suše
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Kojić, Danijela, Kukavica, Biljana, Purać, Jelena, Veljović-, Jovanović, Sonja, Krstić, Sanja, Hasanagić, Dino, Kojić, Danijela, Kukavica, Biljana, Purać, Jelena, Veljović-, Jovanović, Sonja, Krstić, Sanja, and Hasanagić, Dino
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Uzimajući u obzir klimatske promjene koje podrazumijevaju smanjenje količine padavina i porast temperatura, suša je postala globalni problem za koji se smatra da će biti aktuelan još dugo vremena u budućnosti. Osim problema koje stvara u brojnim životnim sferama, suša je jedan od najozbiljnijih faktora koji negativno utiče na poljoprivredu, s obzirom da nedovoljno vodosnabdijevanje negativno utiče na rast i razvoj biljaka. U uslovima suše povećana produkcija reaktivnih vrsta kiseonika može da izazove pomjeranje ravnoteže u ćelijskim oksidoredukcionim reakcijama u smjeru oksidacije te da dovede do nastanka oksidativnog stresa. Posljedice oksidativnog stresa su strukturna i funkcionalna oštećenja ćelijskih komponenti koja dovode do poremećaja u metabolizmu i funkcionisanju ćelije.Veoma važnu ulogu u toleranciji biljaka na stres izazvan sušom ima antioksidativni sistem zaštite koji neizbježno uključuje enzime superoksid dismutazu, katalazu, peroksidaze Klase III i askorbat peroksidazu, ali takođe i niskomolekularne antioksidante poput askorbata, glutationa, fenola i karotenoida. Posljednjih godina se naglo povećao interes za korištenje ekološki opravdanih i neinvazivnih sredstava kojima se unaprijeđuje problem vodosnabdijevanja biljaka, a velika pažnja je posvećena primjeni prirodnih aluminosilikata, od kojih je najpoznatiji zeolit. Iako nisu mnogobrojni, postoje radovi koji upućuju da ovaj prirodni mineral može značajno da doprinese poboljšanju vodnog režima biljaka zbog osobine vezivanja te uravnoteženog otpuštanja vode. U ovoj doktorskoj disertaciji predmet istraživanja je uključio dvije biljne vrste različite po tipu fotosintetičkog metabolizma i adaptivnim strategijama na prilagođavanje na sušu, a to su paradajz (Solanum lycopersicum L.) i kukuruz (Zea mays L.). Fokus istraživanja bio je ispitivanje mogućnosti primjene zeolita u svrhu sprječavanja ili ublažavanja posljedica stresa izazvanog sušom kod biljaka paradajza i kukuruza, ali i ispitivanje mogućeg različit, Taking into account climate change, which implies a precipitation decreasing and temperatures rising, drought has become a global problem that is considered to be relevant for a long time to come. In addition to the problems it creates in many spheres of life, drought is one of the most serious factors that negatively affects agriculture, given that insufficient water supply disrupts the growth and development of plants. The production of reactive oxygen species in drought conditions can cause an inbalance of cellular redox homeostasis in the direction of oxidation and lead to the formation of oxidative stress. The consequences of oxidative stress are structural and functional damages of cellular compartments which leads to disturbance of metabolism and cell function. A very important role in plant tolerance to drought stress has the antioxidant protection systems that inevitably include theenzymes superoxide dismutase, catalase, Class III peroxidases and ascorbate peroxidase, but also low molecular weight antioxidants such as ascorbate, glutathione phenol and carotenoids. In recent years, there has been a sharp increase in interest in the use of environmentally sound and non- invasive means to improve the water supply of plants, and much attention has been paid to the use of natural aluminosilicates, the most famous of which is zeolite. Although not numerous, there are studies that suggest that this natural mineral can significantly contribute to the improvement of the water regime of plants due to the binding properties and balanced release of water. In this PhD thesis, the subject of research included two plant species different in type of photosynthetic metabolism and adaptive drought adaptation strategies, namely tomatoes (Solanum lycopersicum L.) and maize (Zea mays L.). The focus of research was to examine the possibility of using zeolite to prevent or mitigate the effects of drought stress in tomato and maize plants, but also to examine the possible diff
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- 2021
12. Uloga dva nanokompozita fulerenol/doksorubicin i fulerenol/gvožđe kod toksičnih efekata izazvanih doksorubicinom
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Andrić, Nebojša, Đorđević, Aleksandar, Kojić, Danijela, Purać, Jelena, Marković, Jelena, Srdić, Vladimir, Seke, Mariana, Andrić, Nebojša, Đorđević, Aleksandar, Kojić, Danijela, Purać, Jelena, Marković, Jelena, Srdić, Vladimir, and Seke, Mariana
- Abstract
Tumori predstavljaju drugi vodeći uzrok smrti u svetu (posle kardiovaskularnih bolesti) i procena je da će učestalost pojave tumora u budućnosti porasti. Hemioterapija je jedna od najčešće korišćenih metoda lečenja tumora koju često prate sporedni sistemski štetni efekti. S obzirom da lečenje tumora jednim terapeutskim agensom često rezultuje ograničenim kliničkim ishodom, kombinovane terapije mogu sinergistički podići nivo antitumorske aktivnosti, dok sniženjem doze svakog pojedinačnog agensa se mogu umanjiti štetni efekti. Istovremena aplikacija različitih terapeutskih agenasa zahteva dostavnu platformu kako bi se omogućila normalizacija farmakokinetike i farmakodinamike agenasa. Fulerenol C60(OH)24 predstavljaju pogodnu platformu za dostavu lekova zbog svojih fizičko-hemijskih i bioloških karakteristika. U vodenom rastvoru fulerenol se nalazi u obliku negativno naelektrisanih polianjonskih nanočestica koje poseduju veliku površinu i imaju mogućnost vezivanja pozitivno naelektrisanih hemioterapeutika kao što je doksorubicin (DOX), kao i pozitivnih jona metala, u ovom slučaju Fe2+. Osnovna biološka karakteristika fulerenola je da ima ulogu antioksidativnog agensa. U ovom radu iskorišćene su fizičkohemijske osobine fulerenolskih nanočestica (FNP), DOX-a i Fe2+ u cilju formiranja stabilnih nanokompozita FNP/DOX i FNP/Fe2+. Nanokompoziti su okarakterisani različitim fizičkohemijskim metodama, pri čemu je ustanovljeno da su čestice nanokompozita FNP/DOX veličine između 20 i 58 nm, naelektrisanja od -6 mV, čestice nanokompozita FNP/Fe2+ veličine između 11 i 60 nm, naelektrisanja od -30.8 mV, i diskoidalne morfologije. Oba nanokompozita imaju dobru stabilnost u vodenom rastvoru, što ih čini biokompatibilnim i pogodnim za primenu u biomedicini. FNP dekorisan DOX-om, u obliku nanokompozita FNP/DOX, omogućava značajno obimniji unos DOXa u ćelije i smanjuje procenat ćelija u G2M fazi ćelijskog ciklusa, u odnosu na samostalnu primenu DOX-a, kod malignih ćelijskih linija dojk, Tumors are the second leading cause of death in the world (following cardiovascular diseases) and it is estimated that the incidence of tumors will increase in the future. Chemotherapy is one of the most common methods of tumor treatment which is often accompanied by systemic side effects. Treatment of tumors with one therapeutic agent often results in limited clinical outcome. Combination therapy, using a variety of agents and modalities of action, can synergistically increase thelevel of antitumor activity, lowering the dose of each single agent and thus reduce adverse side effects. The simultaneous application of various therapeutic agents requires a delivery platform to enable normalization of agents’ pharmacokinetics and pharmacodynamics. Because of its physico-chemical and biological activities,fullerenol C60(OH)24 represents a suitable platform for drug delivery. In the aqueous solution fullerenol is in the form of negatively charged polianionic nanoparticles (FNP) that possess a large surface area and have the ability of binding positively charged chemotherapeutic drug, such as doxorubicin (DOX), as well as positively charged metal ions, particularly Fe 2+ . The main biological activity of fullerenol is manifested through its antioxidant activity. In this study we used physico-chemical properties of fullerenol, doxorubicin and iron (Fe2+ ) in order to form stable fullerenol/doxorubicin (FNP/DOX) nanocomposite and fulerenol/iron (FNP/Fe 2+) nanocomposite. The nanocomposites were characterized by different physical- chemical methods which showed that FNP/DOX has particle size between 20 nm and 58 nm and charge of -6 mV, while FNP/Fe 2+ has particle size between 11 nm and 60 nm and charge of -30.8 mV. Both nanocomposites revealed discoidal morphology. The nanocomposites have also displeyed good stability in aqueous systems, which makethem biocompatible and suitable for use in biomedical applications. FNP decorated with DOX, in the form of FNP/DOX nanocomposite
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- 2021
13. Anthropogenic influence on seasonal and spatial variation in bioelements and non-essential elements in honeybees and their hemolymph
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Ilijević, Konstantin, Vujanović, Dragana, Orčić, Snežana, Purać, Jelena, Kojić, Danijela, Zarić, Nenad, Gržetić, Ivan, Blagojević, Duško P., Čelić, Tatjana V., Ilijević, Konstantin, Vujanović, Dragana, Orčić, Snežana, Purać, Jelena, Kojić, Danijela, Zarić, Nenad, Gržetić, Ivan, Blagojević, Duško P., and Čelić, Tatjana V.
- Abstract
Honeybee colony losses have been a focus of research in the last years, due to the importance of managed honeybee colonies for economy and ecology. Different unfavorable conditions from the outside environment have a strong impact on the hive health. The majority of losses occur mainly during winter and the exact reason is not completely understood. Only a small number of studies are dealing with content of bioelements, their function and influence on honeybee physiology. The aim of the present study was to determine seasonal and spatial variations in content of bioelements and non-essential elements, in hemolymph and whole body of honeybees originating from three regions with different degrees of urbanization and industrialization. Concentrations of 16 elements were compared: macroelements (Ca, K, Mg, Na), microelements (Cu, Fe, Mn, Zn) and non-essential elements (Al, Ba, Cd, Co, Cr, Ni, Pb, Sr) in samples collected from 3 different environments: Golija (rural region), Belgrade (urban region) and Zajača (industrial region). Content of bioelements and non-essential elements in honeybees was under noticeable influence of the surrounding environment, season and degree of honeybee activity. Hemolymph was proven to be helpful in differentiating air pollution from other sources of honeybee exposure. The results of our study demonstrated that bees can be successfully used as biomonitors since we have observed statistically significant differences among observed locations, but unless compared locations are exposed to excessively different pollution pressures, it is essential that all bees should be collected at the same season.
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- 2021
14. Supplementary data for the article: Ilijević, K.; Vujanović, D.; Orčić, S.; Purać, J.; Kojić, D.; Zarić, N.; Gržetić, I.; Blagojević, D. P.; Čelić, T. V. Anthropogenic Influence on Seasonal and Spatial Variation in Bioelements and Non-Essential Elements in Honeybees and Their Hemolymph. Comparative Biochemistry and Physiology Part C: Toxicology & Pharmacology 2021, 239, 108852. https://doi.org/10.1016/j.cbpc.2020.108852.
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Ilijević, Konstantin, Vujanović, Dragana, Orčić, Snežana, Purać, Jelena, Kojić, Danijela, Zarić, Nenad, Gržetić, Ivan, Blagojević, Duško P., Čelić, Tatjana V., Ilijević, Konstantin, Vujanović, Dragana, Orčić, Snežana, Purać, Jelena, Kojić, Danijela, Zarić, Nenad, Gržetić, Ivan, Blagojević, Duško P., and Čelić, Tatjana V.
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- 2021
15. Ex Vivo Effect of Ibogaine on the Transcriptional Level of Antioxidant Defense Related Genes in Honey Bee (Apis mellifera, L.) Midgut
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Vukašinović, Elvira, primary, Purać, Jelena, additional, Kojić, Danijela, additional, Čelić, Tatjana, additional, Pihler, Ivan, additional, and Blagojević, Duško, additional
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- 2021
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16. Biohemijski i fiziološki parametri stanja medonosne pčele (Apis mellifera L.) tokom letnjeg i zimskog perioda na staništima sa različitim antropogenim uticajem
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Kojić, Danijela, Purać, Jelena, Plavša, Nada, Blagojević, Duško, Orčić, Snežana, Kojić, Danijela, Purać, Jelena, Plavša, Nada, Blagojević, Duško, and Orčić, Snežana
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Medonosna pčela (Apis mellifera Linnaeus, 1758) je široko rasprostranjena vrsta iz grupe socijalnih insekata, glavni oprašivač mnogih divljih biljaka i poljoprivrednih kultura. Pored njene primarne uloge u oprašivanju, koristi se i za dobijanje pčelinjih proizvoda, pre svega meda, voska i propolisa, čime se dodatno naglašava njen privredni značaj. Uzimajući u obzir značaj medonosne pčele, a sa druge strane aktuelan problem pada broja kolonija, postoji potreba za razumevanje uzroka i procenu rizika koji leže u osnovi ovog kompleksnog problema. Stoga, istraživanja u ovoj doktorskoj disertaciji obuhvataju praćenje biohemijskih i fizioloških parametara kod medonosne pčele kao pokazatelja stanja pčelinjih zajednica tokom letnjeg i zimskog perioda na staništima sa različitim antropogenim uticajem. U prvoj fazi istraživanja su izvedeni akutni laboratorijski testovi izlaganja medonosne pčele subletalnim dozama pesticida, tiakloprida i klotianidina, a dobijeni rezultati su ukazali na narušenu neurotransmisiju, na izmene u aktivnosti antioksidativnih enzima i redoks statusa u ćeliji, kao i na imunosupresiju. U drugoj fazi istraživanja su analizirane kolonije medonosne pčele sa različitih lokaliteta na području AP Vojvodine, sa primenom stacionarnog i migratornog tipa pčelarenja, tokom letnjeg i zimskog perioda, a dobijeni rezultati su ukazali na značajne razlike u biohemijskom odgovoru medonosne pčele u zavisnosti od starosti pčela, sezone godine i tipa pčelinjaka. Na osnovu rezultata prethodne dve faze istraživanja, izvršen je odabir uzoraka, kao i izbor parametara za treću fazu istraživanja, gde je praćeno stanje medonosne pčele iz stacionalnih pčelinjih zajednica, tokom letnjeg aktivnog perioda, kao i početkom i krajem zimskog perioda mirovanja pčela, sa tri lokaliteta u Republici Srbiji sa različitim stepenom urbanizacije i industrijalizacije: Beograd kao urbano, Susek kao ruralno i Zajača kao industrijsko područje. Dobijeni rezultati su ukaza, The honey bee (Apis mellifera Linnaeus, 1758) is a‚widespread social insect species and the main pollinator of various wild plants and agricultural crops.In addition to its primary role in pollination, the honey bee is also used for obtaining honeybee products, mostly honey, wax, and propolis, with a significant role in the economy. Number of honey bee colonies is declining, thus necessitating the assessment of underlying reasons and risks. Therefore, in this doctoral dissertation, biochemical and physiological parameters in the honey bee were monitored as indicators of the colonies’ condition during the summer and winter period in habitats with different anthropogenic impacts. In the first phase of the research, acute laboratory tests of honey bee exposure to sublethal doses of pesticides (thiacloprid and clothianidin) were performed and the obtained results indicated impaired neurotransmission, changes in the activity of antioxidant enzymes, and redox status in the cell, as well as immunosuppression. In the second phase of the research, honey bee colonies from different localities in the area of AP Vojvodina were analyzed, using the stationary and migratory types of beekeeping, during the summer and winter period, and the obtained results indicated significant differences in the biochemical response of the honey bee depending on the age of the bees, the season of the year, and the type of apiary. Based on the results of the previous two phases of the research, the selection of samples was performed, as well as the selection of parameters for analysis within the third phase of the research, where the condition of honey bees from stationary bee communities was monitored during the summer active period, as well as the beginning and end of winter dormancy of bees, from three localities in the Republic of Serbia with diffe
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- 2020
17. Surviving the cold: molecular analyses of insect cryoprotective dehydration in the Arctic springtail Megaphorura arctica (Tullberg)
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Popović Željko D, Hillyard Guy, Burns Gavin, Purać Jelena, Thorne Michael AS, Clark Melody S, Grubor-Lajšić Gordana, and Worland M Roger
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Biotechnology ,TP248.13-248.65 ,Genetics ,QH426-470 - Abstract
Abstract Background Insects provide tractable models for enhancing our understanding of the physiological and cellular processes that enable survival at extreme low temperatures. They possess three main strategies to survive the cold: freeze tolerance, freeze avoidance or cryoprotective dehydration, of which the latter method is exploited by our model species, the Arctic springtail Megaphorura arctica, formerly Onychiurus arcticus (Tullberg 1876). The physiological mechanisms underlying cryoprotective dehydration have been well characterised in M. arctica and to date this process has been described in only a few other species: the Antarctic nematode Panagrolaimus davidi, an enchytraied worm, the larvae of the Antarctic midge Belgica antarctica and the cocoons of the earthworm Dendrobaena octaedra. There are no in-depth molecular studies on the underlying cold survival mechanisms in any species. Results A cDNA microarray was generated using 6,912 M. arctica clones printed in duplicate. Analysis of clones up-regulated during dehydration procedures (using both cold- and salt-induced dehydration) has identified a number of significant cellular processes, namely the production and mobilisation of trehalose, protection of cellular systems via small heat shock proteins and tissue/cellular remodelling during the dehydration process. Energy production, initiation of protein translation and cell division, plus potential tissue repair processes dominate genes identified during recovery. Heat map analysis identified a duplication of the trehalose-6-phosphate synthase (TPS) gene in M. arctica and also 53 clones co-regulated with TPS, including a number of membrane associated and cell signalling proteins. Q-PCR on selected candidate genes has also contributed to our understanding with glutathione-S-transferase identified as the major antioxdidant enzyme protecting the cells during these stressful procedures, and a number of protein kinase signalling molecules involved in recovery. Conclusion Microarray analysis has proved to be a powerful technique for understanding the processes and genes involved in cryoprotective dehydration, beyond the few candidate genes identified in the current literature. Dehydration is associated with the mobilisation of trehalose, cell protection and tissue remodelling. Energy production, leading to protein production, and cell division characterise the recovery process. Novel membrane proteins, along with aquaporins and desaturases, have been identified as promising candidates for future functional analyses to better understand membrane remodelling during cellular dehydration.
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- 2009
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18. Ispitivanje 8-hidroksi-2-deoksiguanozina, produkata lipidne peroksidacije i aktivnosti antioksidativnih enzima kod prekanceroznih lezija i u karcinomu grlića materice
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Srđenović-Čonić, Branislava, Mandić, Aljoša, Đurđević, Srđan, Suđi, Jan, Purać, Jelena, Jelić, Marija, Srđenović-Čonić, Branislava, Mandić, Aljoša, Đurđević, Srđan, Suđi, Jan, Purać, Jelena, and Jelić, Marija
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U organizmu se, pod fiziološkim uslovima, produkuju slobodni radikali. Iako se u organizmu nalaze u veoma niskoj koncentraciji, slobodni radikali mogu ispoljiti toksične efekte. Težeći da spare elektrone, u hemijskoj reakciji oksidacije, dolazi do brzog i nepredvidivog vezivanja za susedne molekule, proteine, lipide, ugljene hidrate i nukleinske kiseline od kojih su sačinjeni strukturni elementi ćelije, pokrećući unutrašnji put apoptoze. Antioksidansi su supstance koje sprečavaju ili značajno smanjuju oksidaciju biomolekula. Oksidativni stres je stanje koje nastaje kada produkcija slobodnih radikala premaši kapacitete antioksidativnih enzima da ih neutrališu. U antioksidativne enzime spadaju: superoksid dismutaza (SOD), katalaza (CAT), glutation peroksidaza (GPx), glutation reduktaza (GR) i glutation-S-transferaza (GST). Lipidna peroksidacija (LP) je proces oksidacije višestruko nezasićenih masnih kiselina od strane slobodnih radikala. Malondialdehid predstavlja biohemijski marker pomoću kog je moguće meriti stepen oksidativnog oštećenja ćelijskih membrana. Oksidativna modifikacija DNK dovodi do promene strukture DNK koje rezultuju genetskim oštećenjima. Najčešće korišćen marker oksidativnog stresa je urinarni 8-hidroksi-2-deoksiguanozin (8-OHdG). Oštećenja proteina, lipida, DNK čine važan osnov mnogih oboljenja kao što su ateroskleroza, neurodegenerativna oboljenja, dijabetes, gojaznost, proces starenja, retinopatija, hronične inflamatorne bolesti i karcinom. Polazeći od hipoteze da su ovi biomolekuli različiti u različitim stadijumima bolesti, oni bi mogli predstavljati prognostički marker proširenosti bolesti. Cilj istraživanja je bio da se ispita da li postoje razlike između kontrolne grupe (zdravih žena), pacijentkinja sa prekanceroznim lezijama na grliću materice (HSIL), pacijentkinja sa lokalno ograničenim (FIGO Ia-Ib) i pacijentkinja sa lokalno uznapredovalim karcinomom grlića materice (IIa-IV) u pokazateljima oštećenja DNK (određivanjem vrednosti 8-OHdG), p, Free radicals are produced in our body under physiological conditions. Although in very low concentrations, they can show some toxic effects. While trying to bind electrons, in the chemical reaction of oxidation, they rapidly and unpredictably bind to adjacent molecules- proteins, lipids, carbohydrates and nucleic acids from which the structural elements of the cell are made, triggering the internal pathway of apoptosis. Antioxidants are substances that prevent or significantly reduce the oxidation of biomolecules. Oxidative stress is a condition that occurs when the production of free radicals exceeds the capacity of antioxidant enzymes to neutralize them. The antioxidant enzymes include: superoxide dismutase (SOD), catalase (CAT), glutathione peroxidase (GPx), glutathione reductase (GR), and glutathione-S-transferase (GST). Lipid Peroxidation (LP) is the process of oxidation of polyunsaturated fatty acids by free radicals. Malondialdehyde is a biochemical marker by which it is possible to measure the degree of oxidative damage of cell membranes. The oxidative modification of DNA leads to a change in DNA structure that results in genetic damage. The most commonly used marker of oxidative stress is urinary 8-hydroxy-2-deoxiguanosine (8-OHdG). The damage to proteins, lipids and DNA is an important basis for many diseases such as atherosclerosis, neurodegenerative diseases, diabetes, obesity, aging, retinopathy, chronic inflammatory disease and cancer. Starting from the hypothesis that these biomolecules are different at different stages of the disease, they could represent a prognostic marker of the progression of the disease. The aim of the study was to examine whether there were differences between the control group (healthy women), the patients with precancerous lesions on the cervix (HSIL), the patients with early stage cervical cancer (FIGO Ia-Ib) and the patient with locally advanced cervical cancer (IIa - IV) in the indicators of DNA damage (determining the va
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- 2019
19. Идентификација и анализа потенцијалних супстрата и инхибитора хуманих протеина подфамилије 1С алдо-кето редуктаза (AKR1C) добијених рекомбинантном експресијом
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Petri, Edvard, Kojić, Danijela, Blagojević, Duško, Ćelić, Anđelka, Purać, Jelena, Плавша, Јована, Petri, Edvard, Kojić, Danijela, Blagojević, Duško, Ćelić, Anđelka, Purać, Jelena, and Плавша, Јована
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Истраживање има фокус на хуманим ензимима из суперфамилије алдо-кето редуктаза, које имају велики метаболички значај за хомеостатско функционисање организма. Неки од чланова подфамилије 1С алдо-кето редуктаза (AKR1C) имају улогу у развоју одређених патолошких стања, као што су леукемија, тумори простате, дојке и ендометријума, као и у смањивању ефекта хемотерапија. До сада није регистрован лек који директно утиче на протеине ове групе и самим тим је акценат на изналажењу специфичних лиганада (супстрата, инхибитора), који би могли да имају фармаколошку примену, али и на утврђивању везе између структуре и функције испитиваних лиганада према ензиму. Теза је имала фокус на протеину AKR1C3. У овој дисертацији је представљена оптимизација ензимског есеја и испитивање потенцијалних лиганада и њиховог ефекта на ензимску активност одређених хуманих изоформи протеина из подфамилије AKR1C. Тестирана су синтетисанa стероиднa jeдињења, комерцијална једињења и биљни екстракти. Стероидни лиганди (AKR-1, -2, -3, -7, -9, -19 и -22) који су показали добре инхибиторне карактеристике су детаљније описани одређеним добијеним кинетичким параметрима и затим су кокристализовани са протеином и кофакторм. Од 7 различитих комплекса протеина са најбољиминхибитором, за два комплекса су добијене дифракције са инхибитором и решене кристалне структуре са лигандом у везном месту и врло добром резолуцијом, AKR-7: 1.7 Å, AKR -19: 1.6 Å. Ови резултати представљају прве протеинске кристале чију су структуру решили истраживачи из Србије, а у научном смислу и одличну основу за даљи дизајн и тестирање једињења и кокристализације., Istraživanje ima fokus na humanim enzimima iz superfamilije aldo-keto reduktaza, koje imaju veliki metabolički značaj za homeostatsko funkcionisanje organizma. Neki od članova podfamilije 1S aldo-keto reduktaza (AKR1C) imaju ulogu u razvoju određenih patoloških stanja, kao što su leukemija, tumori prostate, dojke i endometrijuma, kao i u smanjivanju efekta hemoterapija. Do sada nije registrovan lek koji direktno utiče na proteine ove grupe i samim tim je akcenat na iznalaženju specifičnih liganada (supstrata, inhibitora), koji bi mogli da imaju farmakološku primenu, ali i na utvrđivanju veze između strukture i funkcije ispitivanih liganada prema enzimu. Teza je imala fokus na proteinu AKR1C3. U ovoj disertaciji je predstavljena optimizacija enzimskog eseja i ispitivanje potencijalnih liganada i njihovog efekta na enzimsku aktivnost određenih humanih izoformi proteina iz podfamilije AKR1C. Testirana su sintetisana steroidna jedinjenja, komercijalna jedinjenja i biljni ekstrakti. Steroidni ligandi (AKR-1, -2, -3, -7, -9, -19 i -22) koji su pokazali dobre inhibitorne karakteristike su detaljnije opisani određenim dobijenim kinetičkim parametrima i zatim su kokristalizovani sa proteinom i kofaktorm. Od 7 različitih kompleksa proteina sa najboljiminhibitorom, za dva kompleksa su dobijene difrakcije sa inhibitorom i rešene kristalne strukture sa ligandom u veznom mestu i vrlo dobrom rezolucijom, AKR-7: 1.7 Å, AKR -19: 1.6 Å. Ovi rezultati predstavljaju prve proteinske kristale čiju su strukturu rešili istraživači iz Srbije, a u naučnom smislu i odličnu osnovu za dalji dizajn i testiranje jedinjenja i kokristalizacije., This research focuses on human enzymes of the aldo-keto reductase superfamily, whose functions have a significant metabolic impact on organism homeostasis. Some members of the 1C aldo-keto reductase (AKR1C) subfamily play role in the development of specific pathological conditions, such as leukaemia, prostate cancer, breast cancer and endometrial cancer, as well as reducing the effectivness of chemotherapy. However, currently there are no approved and registered drugs that directly affect proteins from this subfamily. Therefore our main aim was to screen for specific ligands (substrates, inhibitors) with potential pharmacological applications, and to establish structure-activity relationships for these ligands and enzymes. This thesis mainly focuses on isoform AKR1C3. In this dissertation, optimization of an enzymatic assay and testing of potential ligands and their effects on the enzymatic activity of specific human isoforms of proteins from subfamily AKR1C are presented. Tested ligands include synthetic steroidal compounds, commercial compounds and plant extracts. Steroid compounds, AKR-1, -2, -3, -7, -9, -19 and -22, were found to be good inhibitors of AKR1C3, and further kinetic studies were conducted. Finally, cocrystalization of protein AKR1C3 with cofactor and these inhibitors was accomplished. From 7 different complexes of protein with inhibitors, two structures were solved to very high resolution, AKR-7: 1.7 Å, AKR -19: 1.6 Å. These results represent the first protein crystal structures solved by researchers from Serbia, and results provide an excellent basis for further design and testing of new inhibitors.
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- 2019
20. Oxidative stress and the activity of antioxidative defense enzymes in overwintering honey bees
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Kojić, Danijela K., Purać, Jelena S., Nikolić, Tatjana V., Orčić, Snežana M., Vujanović, Dragana, Ilijević, Konstantin, Vukašinović, Elvira L., Blagojević, Duško P., Kojić, Danijela K., Purać, Jelena S., Nikolić, Tatjana V., Orčić, Snežana M., Vujanović, Dragana, Ilijević, Konstantin, Vukašinović, Elvira L., and Blagojević, Duško P.
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Over the past decades, the number of managed honey bee Apis mellifera L. (Hymenoptera: Apidae) colonies have been decreasing. The majority of losses occur during winter, suggesting that overwintering honey bees are more susceptible to adverse factors. We focused on the oxidative status of overwintering honey bees, particularly at the beginning (November) and end (March) of the wintering period. Colonies from three locations with different anthropogenic influences were selected: Belgrade, an urban zone, Zajača, an industrial zone, and Susek, a rural area. We measured levels of malondialdehyde (MDA), as a marker of lipid peroxidation, as well as the expression and activity of select antioxidative enzymes: Superoxide dismutase (SOD), catalase (CAT) and glutathione S-transferase (GST). Our results show that enzyme activity and gene expression of antioxidative enzymes are influenced by both sample location and the time of sampling. The majority of analyzed genes had significantly reduced expression, at the end of the overwintering period when higher activities of antioxidative enzymes were also recorded. Among the analyzed parameters, SOD activity and gene expression of microsomal GST isoforms were more affected by local environmental conditions, suggesting the complex role of these enzymes in antioxidative defense and detoxification. The higher MDA levels observed at the end of overwintering for all three locations likely reflects accumulated oxidative damage which could be associated with the aging process, brood rearing and/or the onset flying activity.
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- 2019
21. Oxidative stress and the activity of antioxidative defense enzymes in overwintering honey bees
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Kojić, Danijela, Purać, Jelena, Nikolić, Tatjana V., Orčić, Snežana M., Vujanović, Dragana, Ilijević, Konstantin, Vukašinović, Elvira L., Blagojević, Duško P., Kojić, Danijela, Purać, Jelena, Nikolić, Tatjana V., Orčić, Snežana M., Vujanović, Dragana, Ilijević, Konstantin, Vukašinović, Elvira L., and Blagojević, Duško P.
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Over the past decades, the number of managed honey bee Apis mellifera L. (Hymenoptera: Apidae) colonies have been decreasing. The majority of losses occur during winter, suggesting that overwintering honey bees are more susceptible to adverse factors. We focused on the oxidative status of overwintering honey bees, particularly at the beginning (November) and end (March) of the wintering period. Colonies from three locations with different anthropogenic influences were selected: Belgrade, an urban zone, Zajača, an industrial zone, and Susek, a rural area. We measured levels of malondialdehyde (MDA), as a marker of lipid peroxidation, as well as the expression and activity of select antioxidative enzymes: Superoxide dismutase (SOD), catalase (CAT) and glutathione S-transferase (GST). Our results show that enzyme activity and gene expression of antioxidative enzymes are influenced by both sample location and the time of sampling. The majority of analyzed genes had significantly reduced expression, at the end of the overwintering period when higher activities of antioxidative enzymes were also recorded. Among the analyzed parameters, SOD activity and gene expression of microsomal GST isoforms were more affected by local environmental conditions, suggesting the complex role of these enzymes in antioxidative defense and detoxification. The higher MDA levels observed at the end of overwintering for all three locations likely reflects accumulated oxidative damage which could be associated with the aging process, brood rearing and/or the onset flying activity.
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- 2019
22. The effect of above average winter temperatures on the activity of superoxide dismutase and catalase in diapausing larvae of the European corn borer Ostrinia nubilalis Hbn
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Uzelac, I., Uzelac, I., Avramov, M., Franeta, Filip, Vukašinović, Elvira L., Celić, Tatjana, Purać, Jelena, Kojić, Danijela, Popović, Z., Uzelac, I., Uzelac, I., Avramov, M., Franeta, Filip, Vukašinović, Elvira L., Celić, Tatjana, Purać, Jelena, Kojić, Danijela, and Popović, Z.
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- 2019
23. Surviving extreme polar winters by desiccation: clues from Arctic springtail (Onychiurus arcticus) EST libraries
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Kube Michael, Grubor-Lajšić Gordana, Purać Jelena, Thorne Michael AS, Clark Melody S, Reinhardt Richard, and Worland M Roger
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Biotechnology ,TP248.13-248.65 ,Genetics ,QH426-470 - Abstract
Abstract Background Ice, snow and temperatures of -14°C are conditions which most animals would find difficult, if not impossible, to survive in. However this exactly describes the Arctic winter, and the Arctic springtail Onychiurus arcticus regularly survives these extreme conditions and re-emerges in the spring. It is able to do this by reducing the amount of water in its body to almost zero: a process that is called "protective dehydration". The aim of this project was to generate clones and sequence data in the form of ESTs to provide a platform for the future molecular characterisation of the processes involved in protective dehydration. Results Five normalised libraries were produced from both desiccating and rehydrating populations of O. arcticus from stages that had previously been defined as potentially informative for molecular analyses. A total of 16,379 EST clones were generated and analysed using Blast and GO annotation. 40% of the clones produced significant matches against the Swissprot and trembl databases and these were further analysed using GO annotation. Extraction and analysis of GO annotations proved an extremely effective method for identifying generic processes associated with biochemical pathways, proving more efficient than solely analysing Blast data output. A number of genes were identified, which have previously been shown to be involved in water transport and desiccation such as members of the aquaporin family. Identification of these clones in specific libraries associated with desiccation validates the computational analysis by library rather than producing a global overview of all libraries combined. Conclusion This paper describes for the first time EST data from the arctic springtail (O. arcticus). This significantly enhances the number of Collembolan ESTs in the public databases, providing useful comparative data within this phylum. The use of GO annotation for analysis has facilitated the identification of a wide variety of ESTs associated with a number of different biochemical pathways involved in the dehydration and recovery process in O. arcticus.
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- 2007
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24. Komparativno in vitro ispitivanje efekata ugljeničnih nanocevi u normalnim i malignim ćelijama pluća
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Bogdanović, Gordana, Srđenović-Čonić, Branislava, Stankov, Karmen, Purać, Jelena, Blagojević, Duško, Andrić, Silvana, Božin, Biljana, Jojić, Nikola, Bogdanović, Gordana, Srđenović-Čonić, Branislava, Stankov, Karmen, Purać, Jelena, Blagojević, Duško, Andrić, Silvana, Božin, Biljana, and Jojić, Nikola
- Abstract
Ugljenične nanocevi (UNC) imaju sve veću primenu u elektronici, kompjuterskoj i optičkoj industriji, kao i u biomedicini. Dok proizvodnja jednoslojnih UNC nanocevi beleži sve veći rast poslednjih godina, rizik koji nosi izlaganje ovom nanomaterijalu ostaje nerazjašnjen. Oskudni i često kontradiktorni podaci o toksičnim efektima jednoslojnih UNC ukazuju na potrebu za daljim ispitivanjima. U našim istraživanjima ispitivane su promene u ćelijskom odgovoru kao i morfološke promene nakon delovanja jednoslojnih ugljeničnih nanocevi na ćelijskoj liniji humanih fetalnih fibroblasta pluća MRC-5 i ćelijskoj liniji humanog adenokarcinoma pluća A549. U ovoj studiji korišćene su jednoslojne ugljenične nanocevi koje su sadržale rezidualne nečistoće poput gvožđa. Citotoksičnost jednoslojnih UNC (engl. single-walled carbon nanotubes – SWCNT) je ispitivana kolorimetrijskim MTT testom. Tokom 24 i 48h niske koncentracije jednoslojnih ugljeničnih nanocevi (<250 μg/mL) pokazale su nisku toksičnost na proliferaciju i vijabilnost u obe ispitivane ćelijske linije. Ipak, pri visokim koncentracijama UNC (250-750 μg/mL) antiproliferativni efekat je bio blizu IC50 vrednostima. Na osnovu rezultata dobijenih MTT testom može se zaključiti da su maligne A549 ćelije osetljivije na delovanje jednoslojnih UNC u odnosu na normalne MRC-5 ćelije. Kombinacija ugljeničnih nanocevi sa prirodnim polifenolima (resveratrolom i proantocijanidolima) nije značajno uticala na citotoksičnost u MRC-5 ćelijama, za razliku od A549 ćelija gde je tretman kombinacijama umanjio toksičnost ugljeničnih nanocevi. Transmisionom elektronskom mikroskopijom ispitivan je efekat jednoslojnih ugljeničnih nanocevi na ćelijsku morfologiju i preživljavanje. Intracelularni agregati ugljeničnih nanocevi primećeni su u obe ćelijske linije, čime je potvrđeno da ugljenične nanocevi ulaze u ćelije. Imajući u vidu da nanomaterijali poput ugljeničnih nanocevi indukuju oksidativni stres i njime posredovanu apoptozu, na protočnom citometru je, Carbon nanotubes are being actively introduced in electronics, computer science, and optics as well as for various biomedical applications. While production of single-walled carbon nanotubes (SWCNT) has escalated in recent years, the knowledge on risk associated with exposure remains unclear. Contradictory data on the toxic effects of single-walled carbon nanotubes highlights the urgent need for further studies. In this study we investigated the alterations in cellular response along with morphological changes induced by single-walled carbon nanotubes in human lung fibroblast cell line MRC-5 and adenocarcinoma human alveolar basal epithelial cells A549. In this study we used SWCNT containing large amounts of residual metallic impurities such is iron, and the iron concentration increased in dose dependent manner in cells exposed to SWCNT. Cytotoxicity was evaluated by MTT assay and SWCNT showed little cytotoxic effect on the proliferation and viability of two cell lines tested at the concentrations used (<250 μg/mL) within 24 and 48h. However exposing both cell lines to high concentrations (250-750 μg/mL) resulted in near IC50 values. Based on MTT test SWCNT were more cytotoxic to A549 cell line. Cytotoxicity of SWCNT in combination with natural polyphenols (resveratrol and proanthocyanidins) did not noticeably affect the cytotoxicity of SWCNT to MRC-5 cells. However introduction of polyphenols did reduce the cytotoxicity of SWCNT to A549 cells. Transmission electron microscopy was used to complement cytotoxicity assays and to investigate the pathological effect of internalized SWCNT on cell morphology and survival. Intracellular bundles of CNTs, possibly aggregated/agglomerated were observed in both cell lines, confirming internalization after 24h exposure. Since nanoparticles like carbon nanotubes are toxic mainly because they cause oxidative stress, often associated with an increased apoptosis we checked for apoptotic and necrotic cells using flow cytometry. Incub
- Published
- 2018
25. Temperature adaptation of lipids in diapausing Ostrinia nubilalis: an experimental study to distinguish environmental versus endogenous controls
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Vukašinović, Elvira L., Pond, David W., Grubor-Lajšić, Gordana, Worland, M. Roger, Kojić, Danijela, Purać, Jelena, Popović, Željko D., Blagojević, Duško P., Vukašinović, Elvira L., Pond, David W., Grubor-Lajšić, Gordana, Worland, M. Roger, Kojić, Danijela, Purać, Jelena, Popović, Željko D., and Blagojević, Duško P.
- Abstract
Larvae of the European corn borer (Ostrinia nubilalis Hubn.) were cold acclimated during different phases of diapause to determine if changes in the fatty acid composition lipids occur as part of a programmed diapause strategy, or as a response to low temperatures during winter. Cold acclimation of fifth instar larvae of O. nubilalis during diapause had modest effects further on the readjustments in fatty acid composition of triacylglycerols and phospholipids. Overall, FA unsaturation (UFAs/SFAs ratio) was stable, with the exception of the triacylglycerols fraction after exposure to −3 and −10 °C in mid-diapause (MD) when it significantly increased. Differential scanning calorimetry (DSC) was used to examine phase transitions of total body lipid of cold-acclimated larvae in diapause. Thermal analysis indicated that changes in the melt transition temperatures of whole body total lipids were subtle, but consistent with the modest changes in the level of FA unsaturation observed. We conclude that lipid rearrangements are a function of the endogenous “diapause program” rather than a direct effect of low temperatures, which proved to have limited impact on lipid changes in diapausing larvae of O. nubilalis.
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- 2018
26. Molekularne osnove odgovora medonosne pčele (Apis mellifera, L.) nastres izazvan jonima teških metala
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Purać, Jelena, Mimica-Dukić, Neda, Kojić, Danijela, Ćelić, Anđelka, Blagojević, Duško, Nikolić, Tatjana, Purać, Jelena, Mimica-Dukić, Neda, Kojić, Danijela, Ćelić, Anđelka, Blagojević, Duško, and Nikolić, Tatjana
- Abstract
Istraživanja u ovoj doktorskoj disertaciji su bila usmerena ka razumevanju molekularnih mehanizama koji se aktiviraju kod medonosne pčele (Apis mellifera, L.) kao odgovor na stres izazvan jonima teških metala, što zbog važnosti medonosne pčele kao oprašivača ima poseban značaj i očekuje se da će doprineti očuvanju ove vrste. Istraživanja su bila podeljena u tri faze. U prvoj fazi za analize su korišćene populacije pčela sa lokaliteta sa različitim antropološkim uticajem i izmerena je koncentracija metala u pčelama, pergi i medu, kao i relativna genska ekspresija i aktivnost antioksidativnih enzima. U drugoj fazi pčele su u kontrolisanim laboratorijskim uslovima bile izložene subletalnim dozama jona teških metala (bakra, kadmijuma i olova), nakon čega su izmereni parametri koji ukazuju na redoks status i nivo oksidativnog stresa. Rezultati prve dve faze su pokazali da se ekspresija gena i aktivnost antioksidativnih enzima (superoksid dismutaze, katalaze i glutation S-transferaze) razlikuje u zavisnosti od stepena urbanizacije i industrijalizacije, dok je izlaganje bakru i kadmijumu u kontrolisanim uslovima u trajanju od 48 h dovelo samo do promene u ekspresiji gena i u većini slučajeva ekspresija je bila dozno zavisna od koncentracije metala. Olovo je uzrokovalo promene u koncentraciji glutationa i sulfhidrilnih grupa proteina, što govori o tome da helacija olova može da bude prvi mehanizam odbrane od toksičnih efekata ovog metala. U trećoj fazi bioinformatičkom analizom je pronađen metalotionein medonosne pčele i ispitana je njegova funkcija u zaštiti od toksičnih efekata jona teških metala. Utvrđeno je da pčele poseduju jedan gen za metalotionein, koji kodira mali protein sa regionima bogatim cisteinom za koje mogu da se vežu joni metala. Indukcija genske ekspresije metalotioneina medonosne pčele nakon izlaganja metalima i povećana tolerancija bakterija koje ekspresuju rekombinantni metalotionein na metale je potvr, Research in this doctoral thesis focuses on understanding the molecular mechanisms activated in the honey bee (Apis mellifera L.) as a response to stress caused by exposure to heavy metal ions. Because of the importance of honeybees as pollinators, this has special significance and is expected to contribute to the conservation of this species. Studies have been divided into three phases. In the first phase, bee populations from three localities under different anthropological influence were used and the concentrations of metals in the bees, honey and bee bread (perga), as well as relative gene expression and activity of antioxidant enzymes were measured. In the second phase, bees were exposed to sublethal doses of heavy metal ions (copper, cadmium and lead) under controlled laboratory conditions, after which parameters that indicate redox status and oxidative stress were determined. The results of the first two phases showed that gene expression and activity of antioxidant enzymes (superoxide dismutase, catalase, and glutathione S-transferase) varies depending on the degree of urbanization and industrialization, while exposure to copper and cadmium in controlled conditions for 48 h resulted only in a change in gene expression in the majority of cases, and the expression was dose-dependent on the concentration of the metal. Lead has caused changes in the concentration of glutathione and sulfhydryl groups of proteins, which indicates that chelation may be the first defense mechanism against the toxic effects of this metal. In the third stage, honeybee metallothionein was identified by bioinformatic analysis and its function in protection against the toxic effects of heavy metal ions was examined. It has been found that honeybees have one metallothionein gene, which encodes a small protein with cysteine-rich regions that may bind metal ions. The induction of metallothionein gene expression after exposure of honeybees to metals and increased tolerance of
- Published
- 2017
27. Environmental Effects on Superoxide Dismutase and Catalase Activity and Expression in Honey Bee
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Nikolić, Tatjana V., Purać, Jelena, Orčić, Snežana, Kojić, Danijela, Vujanović, Dragana, Stanimirović, Zoran, Gržetić, Ivan, Ilijević, Konstantin, Šikoparija, Branko, and Blagojević, Duško P.
- Subjects
lead ,fungi ,catalase ,behavior and behavior mechanisms ,honey bee ,pollution ,complex mixtures ,superoxide dismutase - Abstract
Understanding the cellular stress response in honey bees will significantly contribute to their conservation. The aim of this study was to analyze the response of the antioxidative enzymes superoxide dismutase and catalase in honey bees related to the presence of toxic metals in different habitats. Three locations were selected: (i) Tunovo on the mountain Golija, as control area, without industry and large human impact, (ii) Belgrade as urban area, and (iii) Zajaca, as mining and industrial zone. Our results showed that the concentrations of lead (Pb) in whole body of bees vary according to habitat, but there was very significant increase of Pb in bees from investigated industrial area. Bees from urban and industrial area had increased expression of both Sod1 and Cat genes, suggesting adaptation to increased oxidative stress. However, in spite increased gene expression, the enzyme activity of catalase was lower in bees from industrial area suggesting inhibitory effect of Pb on catalase. (C) 2015 Wiley Periodicals, Inc. Ministry of Education, Science and Technological Development of the Republic of Serbia {[}ON 173014, III 46002]
- Published
- 2015
28. Radiobiološki efekti niskih pre-iradijacionih doza jonizujućeg zračenja na humane ćelijske linije HT29 i MRC5
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Erak, Marko, Bogdanović, Gordana, Jovanovic, Darjana, Nikolić, Ivan, Karapandžić-Plešinac, Vesna, Purać, Jelena, Stankov, Karmen, Đan, Igor, Erak, Marko, Bogdanović, Gordana, Jovanovic, Darjana, Nikolić, Ivan, Karapandžić-Plešinac, Vesna, Purać, Jelena, Stankov, Karmen, and Đan, Igor
- Abstract
Radioterapija (RT) je jedan od najvažnijih modaliteta lečenja solidnih malignih tumora i koristi je više od 50% pacijenata (52,3%) sa malignim tumorima. Nauka koja proučava efekte elektromagnetnog zračenja na biološke sisteme naziva se radiobiologija. Radiobiologija se fokusira na odgovor ćelija, tkiva i organizma kao celine na jonizujuće zračenje i proučava mehanizme radiobiološkog odgovora. Izlaganje ćelija niskim dozama JZ koje su nakon određenog vremenskog intervala praćene uobičajenim radioterapijskim dozama naziva se radioadaptivno zračenje. Adaptivni odgovor u sebi može da sadrži nekoliko fenomena: hiperradiosenzitaciju/radiorezistenciju, “bystander” efekat i radioadaptivni efekat u užem smislu. O molekularnim mehanizmima koji stoje iza navedenih efekata ne zna se dovoljno. U ovom radu ispitivan je odgovor malignih i zdravih ćelija na različite modalitete jonizujućeg zračenja u cilju boljeg poznavanja puteva ćelijske smrti i preživljavanja. Potpuno razumevanje molekularnih puteva koji vode u apoptozu ili u preživljavanje ćelija nakon izlaganja jonizujućem zračenju moglo bi koristiti u iznalaženju novih i efikasnijih strategija i modaliteta lečenja malignih tumora u cilju njihove potpune eredikacije. U istraživanju su korištene dve humane ćelijske linije ćelijska linija humanog kolorektalnog karcinoma HT-29 i ćelijska linija humanih fetalnih fibroblasta pluća MRC-5. Ćelije su zračene u dva režima različitim pre-iradijacionim dozama(0,03; 0,05 i 0,07Gy) i istom kurativnom dozom (2Gy) tokom 4 dana. Višekratna primena niskih doza JZ nije značajno smanjila vijabilnost HT-29 ćelija, dok su dve radioadaptivne doze (0,05+2Gy i 0,07+2Gy), adekvatne doze JZ za radioterapijski postulat poštede zdravih ćelija i bolji antitumorski efekat u odnosu na neradioadaptivno zračenje od 2Gy u toku 4 dana. Pokazana je mogućnost modulisanja ćelijskog odgovora na JZ uz pomoć niskih doza JZ koje su praćene dozom od 2Gy (radioadaptivni tip zračenja) u oba dizajnirana režima zračenja. S, Radiotherapy (RT) is one of the most important treatment modality for solid malignant tumors and it is applied in more than 50% of the patients (52.3%). Radiobiology id scientific discipline which studies the effects of electromagnetic irradiation on biological systems. Radiobiology focuses on the response of the cells, tissues and the organism as a whole to ionizing radiation and studying the mechanisms of radiobiological response. Exposure of cells to low-dose irradiation (priming dose) followed by challenging doses is called radioadaptive radiation. Adaptive response is described as several phenomena: hyperradiosensitivity / radiorezistence, "bystander" effect and radioadaptive effect in sensu strict. Molecular mechanisms underlying the above effects are not sufficiently known. In this study, the response of malignant and healthy cells on various modalities of ionizing radiation is explored in order to improve knowledge of pathways of cell death and survival. Fully understanding the molecular pathways leading to apoptosis or cell survival after exposure to ionizing radiation may be used in finding new and more effective strategies and modalities for the treatment of malignant tumors. The study used two human cell lines: human colorectal cancer HT-29 cell line and the human fetal lung fibroblast MRC-5. The cells were irradiated in two modalities using different pre-irradiation doses (0.03, 0.05 and 0,07Gy) and the same challenging dose (2Gy) for 4 days. Everyday use of low-dose did not significantly reduce the viability of HT-29 cells, while two radioadaptive doses (0.05 + 2Gy and 0.07+2Gy), are adequate doses for sparing healthy cells with better anti-tumor effects. The possibility of modulating the cellular response to the ionizing radiation was shown using low-doses followed by 2Gy (radioadaptive radiation) in both designed regimes of radiation. The level of chromosomal damage showed a dose-dependent trend. Dose-dependent damage to the genetic material caused b
- Published
- 2016
29. Efekti oplemenjivanja na genetičku diferencijaciju i varijabilnost genoma u elitnoj germplazmi soje (Glycine max (L.) Merr.)
- Author
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Obreht Vidaković, Dragana, Đorđević, Vuk, Đan, Mihajla, Purać, Jelena, Miladinović, Jegor, Tomičić, Marina, Obreht Vidaković, Dragana, Đorđević, Vuk, Đan, Mihajla, Purać, Jelena, Miladinović, Jegor, and Tomičić, Marina
- Abstract
Identifikacija genomskih regiona na koje je delovala selekcija tokom stvaranja elitnih sorti soje (Glycine max (L.) Merr.) može ukazati na pozicije gena koji determinišu važna agronomska svojstva ili su odgovorni za adaptabilnost. U radu su sagledani efekti oplemenjivanja u agroklimatskim uslovima centralne i istočne Evrope koristeći pristup “hitchhiking” mapiranja i analizu pedigrea. U ovu svrhu su primenjeni molekularni markeri, mikrosateliti i principi populacione genetike, koristeći više različitih pristupa za identifikaciju selektivno značajnih lokusa. Analiza je obuhvatila populacije soje koje su se sastojale od predačkih genotipova i elitnih genotipova koji su nastali u Institutu za ratarstvo i povrtarstvo u Novom Sadu. Analizom pedigrea je potvrđena uska genetička osnova sorti soje elitne populacije. Kao posledica dugogodišnjeg oplemenjivanja, svi analizirani parametri su ukazali na statistički značajno smanjenje genetičkog diverziteta elitne populacije u odnosu na predačku. Usled specifične strukture populacija soje, koja je u velikoj meri bila pod uticajem pedigrea elitnih genotipova, uočen je nizak nivo genetičke diferencijacije među ispitivanim populacijama. Primenom najmanje dva različita pristupa identifikovano je devet mikrosatelitskih lokusa koji su ukazivali na regione genoma na koje je delovala selekcija, a koji su bili uključeni u proces adaptacija u agroklimatskim uslovima centralne i istočne Evrope. U elitnoj populaciji je potvrđeno povećanje stope gametskog disekvilibrijuma, najverovatnije kao posledica delovanja selekcije. „Bottleneck” test je ukazao na značajno smanjenje diverziteta samo kod lokusa na koje je delovala selekcija u elitnoj populaciji, što najverovatnije nije uzrokovano demografskim faktorima, nego takođe predstavlja posledicu delovanja selekcije. Analizom kolokacije poznatih QTL regiona i identifikovanih, selektivno značajnih genomskih regiona, uočeno je ukupno 264 QTL-ova, od kojih su najzastupljeniji bili l, The identification of genomic regions affected by selection during breeding of soybean (Glycine max (L.) Merr.) may indicate the positions of important agronomic traits genes or genes underlying adaptation to a specific target environment. This study investigated the effects of breeding in Central-East European environments by a hitchhiking mapping approach and pedigree analysis. Population genetic principles were applied to microsatellite markers using multiple outlier detection tests. The analysed populations comprised ancestral genotypes and elite varieties, developed at the Institute of Field and Vegetable Crops, Novi Sad. The pedigree analysis confirmed narrow genetic base of elite genotypes. As a result of long-term breeding, all analysed parameters showed significant reduction in genetic diversity in the elite population, compared to the ancestral. Specific population structure of analysed varieties, which has been largely influenced by the pedigree, probably caused a low level of genetic differentiation between the populations. Using at least two approaches, nine markers were considered as strong positive selection candidates, indicating regions involved in the adaptation to Central-East Europe environments. Also, an excess of linkage disequilibrium was confirmed in the elite population, probably caused by selection. Bottleneck tests provided evidence of population bottlenecks only for the candidate positive selection loci in the elite population, suggesting that selection might shaped the pattern of genetic diversity in these regions. The co-localisation analysis of the candidate positive selection loci and previously mapped quantitative trait loci (QTLs), identified in total 264 QTLs in selectively important genomic regions. The highest number of identified QTLs had impact on the reproductive period. In silico analysis revealed a high level of agreement between the identified QTLs and the traits expected to be under selection during soybean breeding, indic
- Published
- 2015
30. Diapause induces remodelling of the fatty acid composition of membrane and storage lipids in overwintering larvae of Ostrinia nubilalis, Hubn. (Lepidoptera: Crambidae)
- Author
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Vukašinović, Elvira L., Pond, David W., Worland, M. Roger, Kojić, Danijela, Purać, Jelena, Popović, Željko D., Grubor-Lajšić, Gordana, Vukašinović, Elvira L., Pond, David W., Worland, M. Roger, Kojić, Danijela, Purać, Jelena, Popović, Željko D., and Grubor-Lajšić, Gordana
- Abstract
Seasonal changes in the FA composition of triacylglycerols and phospholipids prepared from the whole body of non-diapausing and diapausing fifth instar larvae of Ostrinia nubilalis, Hubn. (Lepidoptera: Crambidae) were determined to evaluate the role of these lipids in diapause. Substantial changes in the FA composition of triacylglycerols and phospholipids were triggered by diapause development. This led to a significant increase in the overall FA unsaturation (UFAs/SFAs ratio), attributable to an increase in the relative proportion of MUFAs and the concomitant decrease in PUFAs and SFAs. In triacylglycerols, the significant changes in FAs composition is the result of an increase in the relative proportions of MUFAs, palmitoleic acid (16:1n-7) and oleic acid (18:1n-9), and a concomitant reduction in composition of SFAs and PUFAs, mainly palmitic acid (16:0) and linoleic acid (18:2n-6), respectively. Changes in the composition of phospholipids were more subtle with FAs contributing to the overall increase of FA unsaturation. Differential scanning calorimetry (DSC) analysis revealed that the melt transition temperatures of total lipids prepared from whole larvae, primarily attributable to the triacylglycerol component, were significantly lower during the time course of diapause compared with non-diapause. These observations were correlated to the FA composition of triacylglycerols, most likely enabling them to remain functional during colder winter conditions. We conclude that O. nubilalis undergoes remodelling of FA profiles of both energy storage triacylglycerols and membrane phospholipids as an element of its overwintering physiology which may improve the ability to cold harden during diapause.
- Published
- 2015
31. Efekti oplemenjivanja na genetičku diferencijaciju i varijabilnost genoma u elitnoj germplazmi soje (Glycine max (L.) Merr.)
- Author
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Tomičić, Marina, Obreht-Vidaković, Dragana, Đorđević, Vuk, Đan, Mihajla, Purać, Jelena, Miladinović, Jegor, Tomičić, Marina, Tomičić, Marina, Obreht-Vidaković, Dragana, Đorđević, Vuk, Đan, Mihajla, Purać, Jelena, Miladinović, Jegor, and Tomičić, Marina
- Abstract
Identifikacija genomskih regiona na koje je delovala selekcija tokom stvaranja elitnih sorti soje (Glycine max (L.) Merr.) može ukazati na pozicije gena koji determinišu važna agronomska svojstva ili su odgovorni za adaptabilnost. U radu su sagledani efekti oplemenjivanja u agroklimatskim uslovima centralne i istočne Evrope koristeći pristup “hitchhiking” mapiranja i analizu pedigrea. U ovu svrhu su primenjeni molekularni markeri, mikrosateliti i principi populacione genetike, koristeći više različitih pristupa za identifikaciju selektivno značajnih lokusa. Analiza je obuhvatila populacije soje koje su se sastojale od predačkih genotipova i elitnih genotipova koji su nastali u Institutu za ratarstvo i povrtarstvo u Novom Sadu. Analizom pedigrea je potvrđena uska genetička osnova sorti soje elitne populacije. Kao posledica dugogodišnjeg oplemenjivanja, svi analizirani parametri su ukazali na statistički značajno smanjenje genetičkog diverziteta elitne populacije u odnosu na predačku. Usled specifične strukture populacija soje, koja je u velikoj meri bila pod uticajem pedigrea elitnih genotipova, uočen je nizak nivo genetičke diferencijacije među ispitivanim populacijama. Primenom najmanje dva različita pristupa identifikovano je devet mikrosatelitskih lokusa koji su ukazivali na regione genoma na koje je delovala selekcija, a koji su bili uključeni u proces adaptacija u agroklimatskim uslovima centralne i istočne Evrope. U elitnoj populaciji je potvrđeno povećanje stope gametskog disekvilibrijuma, najverovatnije kao posledica delovanja selekcije. „Bottleneck” test je ukazao na značajno smanjenje diverziteta samo kod lokusa na koje je delovala selekcija u elitnoj populaciji, što najverovatnije nije uzrokovano demografskim faktorima, nego takođe predstavlja posledicu delovanja selekcije. Analizom kolokacije poznatih QTL regiona i identifikovanih, selektivno značajnih genomskih regiona, uočeno je ukupno 264 QTL-ova, od kojih su najzastupljeniji bili lokusi koji su deter, The identification of genomic regions affected by selection during breeding of soybean (Glycine max (L.) Merr.) may indicate the positions of important agronomic traits genes or genes underlying adaptation to a specific target environment. This study investigated the effects of breeding in Central-East European environments by a hitchhiking mapping approach and pedigree analysis. Population genetic principles were applied to microsatellite markers using multiple outlier detection tests. The analysed populations comprised ancestral genotypes and elite varieties, developed at the Institute of Field and Vegetable Crops, Novi Sad. The pedigree analysis confirmed narrow genetic base of elite genotypes. As a result of long-term breeding, all analysed parameters showed significant reduction in genetic diversity in the elite population, compared to the ancestral. Specific population structure of analysed varieties, which has been largely influenced by the pedigree, probably caused a low level of genetic differentiation between the populations. Using at least two approaches, nine markers were considered as strong positive selection candidates, indicating regions involved in the adaptation to Central-East Europe environments. Also, an excess of linkage disequilibrium was confirmed in the elite population, probably caused by selection. Bottleneck tests provided evidence of population bottlenecks only for the candidate positive selection loci in the elite population, suggesting that selection might shaped the pattern of genetic diversity in these regions. The co-localisation analysis of the candidate positive selection loci and previously mapped quantitative trait loci (QTLs), identified in total 264 QTLs in selectively important genomic regions. The highest number of identified QTLs had impact on the reproductive period. In silico analysis revealed a high level of agreement between the identified QTLs and the traits expected to be under selection during soybean breeding, indic
- Published
- 2015
32. Metabolomic Analysis of Diapausing and Noni-diapausing Larvae of the European Corn Borer Ostrinia nubilalis (Hbn.) (Lepidoptera: Crambidae)
- Author
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Purać, Jelena, primary, Kojić, Danijela, additional, Popović, Željko D., additional, Vukašinović, Elvira, additional, Tiziani, Stefano, additional, Günther, Ulrich L., additional, and Grubor-Lajšić, Gordana, additional
- Published
- 2015
- Full Text
- View/download PDF
33. Molekularne osnove otpornosti polarnih insekata na niske temperature
- Author
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Purać, Jelena, Grubor-Lajšić, Gordana, Blagojević, Duško, and Vasiljević, Branka
- Subjects
Insecta ,molekularni mehanizmi ,Insecta, Collembola, low temperatures, molecular mechanisms ,kolembole ,molecular mechanisms ,Collembola ,insekti, kolembole, niske temperature, molekularni mehanizmi ,insekti ,niske temperature ,low temperatures - Abstract
Sposobnost insekata da se prilagode različitim ekološkim uslovima je veoma dobrodokumentovana; oni predstavljaju najrasprostranjeniju grupu životinja na planeti, sa vrstama koje naseljavaju različita kopnena i vodena staništa, od tropskih predela do polova. Razumevanje mehanizama koji omogućavaju insektima da prežive ekstremne temperature i zadrže vitalne funkcije tokom dugog perioda dormancije je kao model sistem od interesa za mnoge naučne oblasti. Na osnovu načina na koji preživljavaju temperature ispod 0ºC insekte možemo podeliti u tri grupe: i) insekti koji tolerišu formiranje leda u ekstraćelijskom prostoru,ii) insekti koji ne tolerišu zamrzavanje i moraju da ga izbegnu, a to čine superhlađenjem svojih telesnih tečnosti i iii) insekti koji preživljavaju zahvaljujući gubitku vode kroz permeabilnu kutikulu, što je nazvano krioprotektivna dehidratacija. Zajednička odlika organizama sa različitim mehanizmima adaptacije na niske temperature je setbiohemijskih jedinjenja čija se fiziološka funkcija razlikuje u zavisnosti da li organizam pripada grupi koja toleriše ili ne toleriše zamrzavanje. To su nukleatori kristalizacije leda, krio/anhidroprotektanti i antifriz proteini.Cilj ovih istraživanja je bio ispitivanje molekularne osnove otpornosti na niske temperature dve vrste polarnih kolembola Onychiurus arcticus i Cryptopygus antarcticus kombinujući fiziološki, biohemijski i molekularno biološki pristup. Ispitivane vrste izbegavaju zamrzavanje svojih telesnih tečnosti primenjujući različite strategije preživljavanja. Za antarktičku vrstu C. antarcticus karakteristična je brza promena tačke superhlađenja, kao i njena bimodalna distribucija tokom leta, kada neke jedinke mrznu na višim temperaturama (manje otporne na hladnoću), a druga na nižim (otpornije na hladnoću). Ova bimodalna distribucija tačke superhlađenja je dobro dokumentovana, ali slabo razjašnjena na molekularnom nivou. Druga, arktička vrsta O. arcticus koristi strategiju preživljavanja zimskih temperature koje idu i do -25ºC nazvanu krioprotektivna dehidratacija. Na ovaj način, količina slobodne vode u telu se značajno redukuje, a akumulira se trehaloza koja deluje kao krio/anhidroprotektant. Iako je krioprotektivna dehidratacija opisana i kod drugih vrstainsekata, molekularni mehanizmi koji se nalaze u osnovi ovog fenomena su veoma slabo razjašnjeni.Za karakterizaciju genoma generisano je 16379 EST sekvenci za O. arcticus i 1180 za C. antarcticus. To su ujedno i prvi javno dostupni podaci u bazama podataka o genomima ove dve vrste koji predstavljaju značajnu osnovu za komparativne genomske analize. Činjenica da kod obe analizirane vrste, oko 60% EST sekvenci nije pokazalo statistički značajnu sličnost sa proteinima iz baza podataka ukazuje na specifičan patern genske ekspresije kao adaptivni odgovor ispitivanih vrsta na niske temperature.Sa ciljem da se identifikuju geni uključeni u preživljavanje niskih temperatura konstruisani su mikroereji, za O. arcticus štampanjem 6912 cDNK u duplikatu, a za C. antarcticus štampanjem 672 cDNK u duplikatu.. Analizom sekvenci identifikovanih putem homologije sa dostupnm bazama podataka kod C. antarcticusuočen je jasan trend povećane ekspresije gena koji kodiraju strukturne proteine u grupi koja je otporna na hladnoću. Ove strukturne proteine uglavnom čine kutikularni proteini, što je u skladu sa rezultatima nedavnih istraživanja kod kolembola, da je presvlačenje proces tokom kog se snižava tačka superhlađenja, odnosno da varijacije u tački superhlađenja mogu nastati kao posledica endogenih fizioloških procesa tokom presvlačenja. Kod O. arcticus analizom EST sekvenci i mikroereja identifikovani supotencijalni geni i biohemijski putevi povezani sa krioprotektivnom dehidratacijom, a istakli bi gene uključene u metabolizam ugljenih hidrata, gene za akvaporine, proteine toplotnog stresa, LEA proteine i enzime antioksidativne zaštite., The ability of insects to adapt to diverse ecological conditions iswell documented; they are the most diverse fauna on earth, with different species occupying arange of terrestrial and aquatic habitats from the tropics to the poles. Understanding the mechanisms by which insects survive such extreme temperatures and retain viability for longperiods in the dormant state is of great interest to many scientific fields. Insects have evolved three main strategies to survive sub-zero temperatures: i) freeze tolerance, ii) freeze avoidance and iii) cryoprotective dehydration. The main biochemical compounds involved in surviving sub-zero temperatures are same for different strategies but their physiological role is different. They include: ice nucleating agents (INAs), cryo/ anhydroprotectants, and antifreeze proteins (AFPs).The aim of this study was to determine molecular adaptations to extreme cold environments, combining physiology, biochemistry and molecular biology pproaches, in thePolar Collembola: Cryptopygus antarcticus and Onychiurus arcticus. Both species are freeze avoiding but employ different strategies for surviving low temperatures. The Antarctic springtail C. antarcticusis capable of rapid cold hardening with a bi-modal distribution of super cooling points (SCP) with high (less cold-hardened) and low (more cold-hardened) groups of animals present even during the growing season in summer. This bimodal distribution has been well documented, but is poorly understood. The Arctic springtail O. arcticusemploys the strategy known as cryoprotective dehydration to survive winter temperatures as low as -25ºC. With this technique, the amount ofavailable water in the body is reduced to almost zero and also there is an accumulation of trehalose, which acts as a cryo/anhydroprotectant. Although cryoprotective dehydration has been described in other insects, the molecular mechanisms behind this phenomenon are poorly understood.A total of 16,379 EST clones were generated for O. arcticus and 1180 for C. antarcticus. This represents the first publicly available sequence data for this two species providing useful data for comparative genomic analysis. The fact that around 60% of the clones for both species showed no sequence similarity to annotated genes in the datasets, suggests a specific pattern of gene expression in these species as adaptation to low temperatures.Two microarrays were constructed to identify genes involved in surviving low temperatures, one for C. antarcticus by printing 672 clones in duplicate and the other for O. arcticus by printing 6912 clones in duplicate. An analysis of those where putative function could be inferred via database homology, in C. antarcticus there was aclear pattern of up-regulation of structural proteins being associated with the cold tolerant group. These structural proteins mainly comprised cuticle proteins and provide support for the recenttheory that summer SCP variation within Collembola species could be a consequence of moulting, with moulting population having lowered SCPs. In O. arcticus EST and microarrayanalysis revealed clonesand biochemical pathways associated with cryoprotective dehydration with a particular reference to genes involved in carbohydrate metabolism, aquaporin genes, heat shock proteins, LEA proteins and antioxidant enzymes.
- Published
- 2009
34. Polimorfizmi gena lipidnog metabolizma kod pacijenata sa metaboličkim sindromom
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Stankov, Karmen, Đan, Mihajla, Stokić, Edita, Obreht, Dragana, Kovačev-Zavišić, Branka, Popić-Paljić, Feodora, Purać, Jelena, Jovanović, Nataša, Stankov, Karmen, Đan, Mihajla, Stokić, Edita, Obreht, Dragana, Kovačev-Zavišić, Branka, Popić-Paljić, Feodora, Purać, Jelena, and Jovanović, Nataša
- Abstract
Metabolic syndrome is a complex polygene multifactor metabolic disorder. By knowing genetic predisposition, environment factors which are subject to change can be corrected, which allows the disorder to be postponed or prevented. Determining genetic background of metabolic syndrome is one of the necessary steps in preventing the disorder; it would save the cost of medical treatments as well as help in designing personalized therapy. Experiment goals are determining the connection between individual alleles of apoE and LRPI genes on one side and the appearance of metabolic syndrome on the other; the analysis of correlation between apoE and LRPI genes polymorphism and each individual anthropometric and biochemical parameter in both tested groups; as well as establishing the correlation of every composite genotype of apoE and LRPI genes with presence of metabolic syndrome, and the connection with each anthropometric and biochemical parameter in both tested groups. This paper has demonstrated the importance ofapoE gene and LRPI gene in the metabolism of lipids and in all other anthropometric and biochemical parameters tested and the impact of e4 allele form of apoE gene and T allele form of LRPI gene individually, as well as the impact of composite genotypes both of the above mentioned genes on the emergence and development of the metabolic syndrome. It has been determined that the most common allele form of apoE gene are e3, e4 and e2 subsequently, while the most common allele forms of LRP 1 gene is C in both test groups. It is concluded that in the experimental group more fi-equent is e4 allele of apoE gene and T allele ofLRPl gene, which confirms negative impact of stated alleles onto tested anthropometric and biochemical parameters. Acquired results show that presence ofe4 allele ofapoE gene increases the chance 11.5 times fur the metabolic syndrome compared to the carriers of e2 and e3 alleles, while T allele of LRPl gene increases the chance 4.76 times in comparis
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- 2014
35. Molekularna i biohemijska osnova dijapauze kukuruznog plamenca Ostrinia nubilalis (Hbn.) (Lepidoptera: Pyralidae)
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Radojičić, Ratko, Grubor-Lajšić, Gordana, Blagojević, Duško, Stanisavljević, Ljubiša, Purać, Jelena, Popović, Željko D., Radojičić, Ratko, Grubor-Lajšić, Gordana, Blagojević, Duško, Stanisavljević, Ljubiša, Purać, Jelena, and Popović, Željko D.
- Abstract
Dijapauza je period zaustavljenog razvoja kod insekata, drugih zglavkara i određenih vrsta riba, a koja se javlja na određenom, za svaku vrstu karakterističnom, razvojnom stadijumu. Dijapauzu, kao dugotrajnu i „skupu“ fazu mirovanja, karakteriše prilagođavanje organizma na molekularnom, fiziološkom, morfološkom i bihevioralnom nivou. Promene koje karakterišu dijapauzu većine vrsta su supresija metabolizma, zaustavljanje ili usporavanje razvića, izmenjena ekspresija gena, sinteza zaštitnih proteina i metabolita koji vode ka povećanju otpornosti organizma. Sposobnost insekata da prežive dugotrajne nepovoljne periode u stanju dijapauze omogućila im je da koriste sezonski uslovljene resurse, kolonizuju raznovrsna staništa, smanjuju ukrštanje u srodstvu i povećavaju genetičku raznovrsnost. S obzirom na ogroman značaj dijapauze u životnom ciklusu insekata, ali i drugih organizama, bilo kakvo odlaganje ili njeno prerano prekidanje može imati negativne posledice na njihovo preživljavanje. Iz tog razloga, bolje poznavanje biološke osnove dijapauze može omogućiti unapređenje kontrole insekatskih vrsta koje nanose ekonomsku štetu u poljoprivredi, ali i poboljšanje metoda gajenja vrsta koje su korisne (bumbari, pčele, svilena buba, bubamare, parazitske osice i druge). Takođe, razumevanje mehanizama otpornosti i zaštite od stresa, npr. na niske temperature, mogu doprineti razvoju novih tehnika za krioprezervaciju organa i tkiva. Na kraju, insekti koji miruju, zbog specifičnosti metaboloma, mogu biti potencijalan izvor novih lekova, ali i dobri modeli za istraživanje starenja, gojaznosti i dijabetesa. Kukuruzni plamenac Ostrinia nubilalis (Hübner 1796) je vrsta moljca čije su larve polifagne herbivore koje se hrane na preko 200 biljnih vrsta, uključujući važne poljoprivredne useve, povrće i voće. Krajem leta i početkom jeseni larve 5. stupnja ulaze u fakultativnu dijapauzu, preživljavajući oštre kontinentalne zime u fazi mirovanja. Tokom dijapauze gusenice O. nubilalis razvijaju, Diapause is a carefully regulated state of arrested development that occurs at a species-specific life stage of insects, other arthropods and some fish species. It engages a plethora of molecular, physiological, morphological and behavioral changes that altogether increase stress tolerance and the ability to survive. Thus, diapause enables insects to exploit seasonally variable food resources and colonize new habitats, as well as decrease inbreeding and increase mating of temporally separated genotypes in a population. Due to the tremendous importance of diapause for survival, any factors that delay or perturb diapause can potentially compromise the fitness of an organism. Thus, deeper knowledge of the biology of diapause could help improve or develop new means of pest control for insect populations, as well as to advance current rearing techniques of beneficial species (bees, ladybirds, parasitic wasps, silkworm etc.). Additionally, defining the molecular background of stress tolerance during diapause, such as cold hardiness, could improve techniques for cryopreservation of organs, tissues and cells. Also, because of the specificity of the metabolom, diapausing insects could be regarded as a potentially rich source of new pharmaceutical agents, or could be used as model organisms to study ageing, obesity and diabetes. The European corn borer (ECB), Ostrinia nubilalis (Hübner 1796), is a pest moth species whose polyphagous larvae feed on more than 200 plants, including important crops, vegetables and fruits. In late August or the beginning of September, because of a critical shortening of the photoperiod, 5th instar larvae of ECB stop feeding and enter into diapause. Diapausing larvae gradually develop freeze tolerance and become cold hardy, which has enabled this species to successfully colonize temperate regions. The aim of this dissertation was to improve our understanding of the molecular and biochemical mechanisms governing diapause of O. nubilalis...
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- 2014
36. Diapause induces changes in the composition and biophysical properties of lipids in larvae of the European corn borer, Ostrinia nubilalis (Lepidoptera: Crambidae)
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Vukašinović, Elvira L., Pond, David W., Worland, Michael Roger, Kojić, Danijela, Purać, Jelena, Blagojević, Duško P., Grubor-Lajšić, Gordana, Vukašinović, Elvira L., Pond, David W., Worland, Michael Roger, Kojić, Danijela, Purać, Jelena, Blagojević, Duško P., and Grubor-Lajšić, Gordana
- Abstract
This study compares the composition and biophysical properties of lipids in non-diapausing and diapausing fifth instar larvae of Ostrinia nubilalis Hubn. (Lepidoptera: Crambidae). The majority of fat body lipids in both of these physiological states were comprised of ~ 90% triacylglycerols (TAGs), whereas the haemolymph contained a more even distribution of all lipid classes. The fatty acid composition and biophysical properties of the fat body lipids differed markedly between non-diapausing and diapausing larvae. Diapause was associated with a dramatic increase in the proportions of palmitoleic acid (16:1n-7) and oleic acid (18:1n-9), with concurrent reductions in palmitic acid (16:0) and linoleic acid (18:2n-6). The increase in the level of unsaturation of the fat body lipids, which caused a marked shift in their phase transitions to lower temperatures, was triggered by diapause rather than low temperatures. Adjustments of fatty acid compositions are likely to be an important component of winter diapause mechanisms, possibly maintaining the fluidity of cell membranes and the functionality of the organism during lower winter temperatures.
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- 2013
37. Hydrogen peroxide and ecdysone in the cryoprotective dehydration strategy of Megaphorura Arctica(Onychiuridae: Collembola)
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Grubor-Lajšić, Gordana, Petri, Edward T., Kojić, Danijela, Purać, Jelena, Popović, Željko D., Worland, Roger M., Clark, Melody S., Mojović, Miloš, Blagojević, Duško P., Grubor-Lajšić, Gordana, Petri, Edward T., Kojić, Danijela, Purać, Jelena, Popović, Željko D., Worland, Roger M., Clark, Melody S., Mojović, Miloš, and Blagojević, Duško P.
- Abstract
The Arctic springtail, Megaphorura arctica, survives sub-zero temperatures in a dehydrated state via trehalose-dependent cryoprotective dehydration. Regulation of trehalose biosynthesis is complex; based in part on studies in yeast and fungi, its connection with oxidative stress caused by exposure of cells to oxidants, such as hydrogen peroxide (H2O2), or dehydration, is well documented. In this respect, we measured the amount of H2O2 and antioxidant enzyme activities (superoxide dismutases: copper, zinc—CuZnSOD and manganese containing–MnSOD, and catalase—CAT), as the regulatory components determining H2O2 concentrations, in Arctic springtails incubated at 5 °C (control) versus −2 °C (threshold temperature for trehalose biosynthesis). Because ecdysone also stimulates trehalose production in insects and regulates the expression of genes involved in redox homeostasis and antioxidant protection in Drosophila, we measured the levels of the active physiological form of ecdysone—20-hydroxyecdysone (20-HE). Significantly elevated H2O2 and 20-HE levels were observed in M. arctica incubated at −2 °C, supporting a link between ecdysone, H2O2, and trehalose levels during cryoprotective dehydration. CAT activity was found to be significantly lower in M. arctica incubated at −2 °C versus 5 °C, suggesting reduced H2O2 breakdown. Furthermore, measurement of the free radical composition in Arctic springtails incubated at 5 °C (controls) versus −2 °C by Electron Paramagnetic Resonance spectroscopy revealed melanin-derived free radicals at −2 °C, perhaps an additional source of H2O2. Our results suggest that H2O2 and ecdysone play important roles in the cryoprotective dehydration process in M. arctica, linked with the regulation of trehalose biosynthesis.
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- 2013
38. Lea protein expression during cold-induced dehydration in the Arctic Collembola Megaphorura arctica
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Popović, Ž.D, Purać, Jelena, Kojić, Danijela, Pamer, Elvira L., Worland, M. Roger, Blagojević, D.P., Grubor-Lajšić, Gordana, Popović, Ž.D, Purać, Jelena, Kojić, Danijela, Pamer, Elvira L., Worland, M. Roger, Blagojević, D.P., and Grubor-Lajšić, Gordana
- Abstract
The Arctic springtail Megaphorura arctica (Tullberg, 1876) employs a strategy known as cryoprotective dehydration to survive winter temperatures as low as -25 degrees C. During cryoprotective dehydration, water is lost from the animal to ice in its surroundings as a result of the difference in vapour pressure between the animal's supercooled body fluids and ice (Worland et al., 1998; Holmstrup and Somme, 1998). This mechanism ensures that as the habitat temperature falls, the concentration of solutes remains high enough to prevent freezing (Holmstrup et al., 2002). In M. arctica, accumulation of trehalose, a cryo/anhydro protectant, occurs in parallel with dehydration. Recent studies have identified a number of genes and cellular processes involved in cryoprotective dehydration in M. arctica (Clark et al., 2007; Clark et al., 2009; Purac et al., 2011). One of them includes late embryogenesis abundant (LEA) proteins. This study, together with that of Bahrndorff et al. (2008), suggests that LEA proteins may be involved in protective dehydration in this species.
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- 2011
39. Cryoprotective dehydration: clues from an insect
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Lubzens, E., Cerda, J., Clark, Melody S, Worland, M. Roger, Grubor-Lajšić, Gordana, Purać, Jelena, Thorne, Michael A.S., Clark, Melody S., Lubzens, E., Cerda, J., Clark, Melody S, Worland, M. Roger, Grubor-Lajšić, Gordana, Purać, Jelena, Thorne, Michael A.S., and Clark, Melody S.
- Abstract
Arthropods have evolved a number of different adaptations to survive extreme environmental temperatures including, in some regions, over-wintering temperatures well below 0°C. One of the less common adaptations to surviving cold is that of cryoprotective dehydration, where the animal becomes almost anhydrobiotic with the loss of virtually all osmotically active water. In this chapter, we describe integrated studies utilising physiology, biochemistry and molecular biology to understand this phenomenon in the Arctic springtail (Megaphorura arctica) (formerly Onychiurus arcticus). These studies concentrate on the action of trehalose as a cryoprotectant, the production of antioxidants to reduce cell damage and changes in membrane composition.
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- 2010
40. Molekularne osnove otpornosti polarnih insekata na niske temperature
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Grubor-Lajšić, Gordana, Blagojević, Duško, Vasiljević, Branka, Purać, Jelena, Grubor-Lajšić, Gordana, Blagojević, Duško, Vasiljević, Branka, and Purać, Jelena
- Abstract
Sposobnost insekata da se prilagode različitim ekološkim uslovima je veoma dobro dokumentovana; oni predstavljaju najrasprostranjeniju grupu životinja na planeti, sa vrstama koje naseljavaju različita kopnena i vodena staništa, od tropskih predela do polova. Razumevanje mehanizama koji omogućavaju insektima da prežive ekstremne temperature i zadrže vitalne funkcije tokom dugog perioda dormancije je kao model sistem od interesa za mnoge naučne oblasti. Na osnovu načina na koji preživljavaju temperature ispod 0ºC insekte možemo podeliti u tri grupe: i) insekti koji tolerišu formiranje leda u ekstraćelijskom prostoru,ii) insekti koji ne tolerišu zamrzavanje i moraju da ga izbegnu, a to čine superhlađenjem svojih telesnih tečnosti i iii) insekti koji preživljavaju zahvaljujući gubitku vode kroz permeabilnu kutikulu, što je nazvano krioprotektivna dehidratacija. Zajednička odlika organizama sa različitim mehanizmima adaptacije na niske temperature je setbiohemijskih jedinjenja čija se fiziološka funkcija razlikuje u zavisnosti da li organizam pripada grupi koja toleriše ili ne toleriše zamrzavanje. To su nukleatori kristalizacije leda, krio/anhidroprotektanti i antifriz proteini. Cilj ovih istraživanja je bio ispitivanje molekularne osnove otpornosti na niske temperature dve vrste polarnih kolembola Onychiurus arcticus i Cryptopygus antarcticus kombinujući fiziološki, biohemijski i molekularno biološki pristup. Ispitivane vrste izbegavaju zamrzavanje svojih telesnih tečnosti primenjujući različite strategije preživljavanja. Za antarktičku vrstu C. antarcticus karakteristična je brza promena tačke superhlađenja, kao i njena bimodalna distribucija tokom leta, kada neke jedinke mrznu na višim temperaturama (manje otporne na hladnoću), a druga na nižim (otpornije na hladnoću). Ova bimodalna distribucija tačke superhlađenja je dobro dokumentovana, ali slabo razjašnjena na molekularnom nivou. Druga, arktička vrsta O. arcticus koristi strategiju preživljavanja zimskih, The ability of insects to adapt to diverse ecological conditions iswell documented; they are the most diverse fauna on earth, with different species occupying arange of terrestrial and aquatic habitats from the tropics to the poles. Understanding the mechanisms by which insects survive such extreme temperatures and retain viability for longperiods in the dormant state is of great interest to many scientific fields. Insects have evolved three main strategies to survive sub-zero temperatures: i) freeze tolerance, ii) freeze avoidance and iii) cryoprotective dehydration. The main biochemical compounds involved in surviving sub-zero temperatures are same for different strategies but their physiological role is different. They include: ice nucleating agents (INAs), cryo/ anhydroprotectants, and antifreeze proteins (AFPs). The aim of this study was to determine molecular adaptations to extreme cold environments, combining physiology, biochemistry and molecular biology pproaches, in thePolar Collembola: Cryptopygus antarcticus and Onychiurus arcticus. Both species are freeze avoiding but employ different strategies for surviving low temperatures. The Antarctic springtail C. antarcticusis capable of rapid cold hardening with a bi-modal distribution of super cooling points (SCP) with high (less cold-hardened) and low (more cold-hardened) groups of animals present even during the growing season in summer. This bimodal distribution has been well documented, but is poorly understood. The Arctic springtail O. arcticusemploys the strategy known as cryoprotective dehydration to survive winter temperatures as low as -25ºC. With this technique, the amount ofavailable water in the body is reduced to almost zero and also there is an accumulation of trehalose, which acts as a cryo/anhydroprotectant. Although cryoprotective dehydration has been described in other insects, the molecular mechanisms behind this phenomenon are poorly understood. A total of 16,379 EST clone
- Published
- 2009
41. Surviving the cold: molecular analyses of insect cryoprotective dehydration in the Arctic springtail Megaphorura arctica (Tullberg)
- Author
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Clark, Melody S., Thorne, Michael A.S., Purać, Jelena, Burns, Gavin, Hillyard, Guy, Popović, Željko D., Grubor-Lajšić, Gordana, Worland, Michael Roger, Clark, Melody S., Thorne, Michael A.S., Purać, Jelena, Burns, Gavin, Hillyard, Guy, Popović, Željko D., Grubor-Lajšić, Gordana, and Worland, Michael Roger
- Abstract
Background: Insects provide tractable models for enhancing our understanding of the physiological and cellular processes that enable survival at extreme low temperatures. They possess three main strategies to survive the cold: freeze tolerance, freeze avoidance or cryoprotective dehydration, of which the latter method is exploited by our model species, the Arctic springtail Megaphorura arctica, formerly Onychiurus arcticus (Tullberg 1876). The physiological mechanisms underlying cryoprotective dehydration have been well characterised in M. arctica and to date this process has been described in only a few other species: the Antarctic nematode Panagrolaimus davidi, an enchytraied worm, the larvae of the Antarctic midge Belgica antarctica and the cocoons of the earthworm Dendrobaena octaedra. There are no in-depth molecular studies on the underlying cold survival mechanisms in any species. Results: A cDNA microarray was generated using 6,912 M. arctica clones printed in duplicate. Analysis of clones up-regulated during dehydration procedures (using both cold-and salt-induced dehydration) has identified a number of significant cellular processes, namely the production and mobilisation of trehalose, protection of cellular systems via small heat shock proteins and tissue/cellular remodelling during the dehydration process. Energy production, initiation of protein translation and cell division, plus potential tissue repair processes dominate genes identified during recovery. Heat map analysis identified a duplication of the trehalose-6-phosphate synthase (TPS) gene in M. arctica and also 53 clones co-regulated with TPS, including a number of membrane associated and cell signalling proteins. Q-PCR on selected candidate genes has also contributed to our understanding with glutathione-S-transferase identified as the major antioxdidant enzyme protecting the cells during these stressful procedures, and a number of protein kinase signalling molecules involved in recovery. Conclu
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- 2009
42. Surviving extreme polar winters by desiccation: clues from Arctic springtail (Onychiurus arcticus) EST libraries
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Clark, Melody S., Thorne, Michael A.S., Purać, Jelena, Grubor-Lajšić, Gordana, Kube, Michael, Reinhardt, Richard, Worland, M. Roger, Clark, Melody S., Thorne, Michael A.S., Purać, Jelena, Grubor-Lajšić, Gordana, Kube, Michael, Reinhardt, Richard, and Worland, M. Roger
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Background Ice, snow and temperatures of -14°C are conditions which most animals would find difficult, if not impossible, to survive in. However this exactly describes the Arctic winter, and the Arctic springtail Onychiurus arcticus regularly survives these extreme conditions and re-emerges in the spring. It is able to do this by reducing the amount of water in its body to almost zero: a process that is called "protective dehydration". The aim of this project was to generate clones and sequence data in the form of ESTs to provide a platform for the future molecular characterisation of the processes involved in protective dehydration. Results Five normalised libraries were produced from both desiccating and rehydrating populations of O. arcticus from stages that had previously been defined as potentially informative for molecular analyses. A total of 16,379 EST clones were generated and analysed using Blast and GO annotation. 40% of the clones produced significant matches against the Swissprot and trembl databases and these were further analysed using GO annotation. Extraction and analysis of GO annotations proved an extremely effective method for identifying generic processes associated with biochemical pathways, proving more efficient than solely analysing Blast data output. A number of genes were identified, which have previously been shown to be involved in water transport and desiccation such as members of the aquaporin family. Identification of these clones in specific libraries associated with desiccation validates the computational analysis by library rather than producing a global overview of all libraries combined. Conclusion This paper describes for the first time EST data from the arctic springtail (O. arcticus). This significantly enhances the number of Collembolan ESTs in the public databases, providing useful comparative data within this phylum. The use of GO annotation for analysis has facilitated the identification of a wide variety of ESTs associate
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- 2007
43. Surviving the cold: molecular analyses of insect cryoprotective dehydration in the Arctic springtail Megaphorura arctica (Tullberg)
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Clark, Melody S, primary, Thorne, Michael AS, additional, Purać, Jelena, additional, Burns, Gavin, additional, Hillyard, Guy, additional, Popović, Željko D, additional, Grubor-Lajšić, Gordana, additional, and Worland, M Roger, additional
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- 2009
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44. Surviving extreme polar winters by desiccation: clues from Arctic springtail (Onychiurus arcticus) EST libraries
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Clark, Melody S, primary, Thorne, Michael AS, additional, Purać, Jelena, additional, Grubor-Lajšić, Gordana, additional, Kube, Michael, additional, Reinhardt, Richard, additional, and Worland, M Roger, additional
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- 2007
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45. Epigenetic changes in eusocial insects which affect age and longevity.
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Đorđievski, Srđana, Čelić, Tatjana V., Vukašinović, Elvira L., Kojić, Danijela, and Purać, Jelena
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EPIGENOMICS , *RNA modification & restriction , *LONGEVITY , *EPIGENETICS , *POST-translational modification , *NON-coding RNA , *DNA methylation - Abstract
Ageing is a complex process common to all living organisms, influenced by different environmental and genetic factors which are difficult to understand. Epigenetic modifications such as DNA methylation, histone posttranslational modification and non-coding RNA affect ageing. Eusocial insects provide an ideal platform for analysing the impact of epigenetic changes on ageing due to their phenotypic plasticity. This study summarizes most of the data published so far on epigenetic changes during ageing in eusocial insects. [ABSTRACT FROM AUTHOR]
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- 2022
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46. Effects of drought and flooding stress to antioxidative defence system in two maize (Zea mayse L.) hybrids
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Lukić, Nataša, Kukavica, Biljana, Purać, Jelena, Petri, Edward, Mišić, Danijela, and Kojić, Danijela
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Oxidative stress, Antioxidants, flooding stress, drought stress, maize ,Oksidativni stres, Antioksidativni mehanizmi zaštite, kukuruz, vodni deficit, vodni suficit - Abstract
Evidentne klimatske promene dovode do izmena ne samo u smislu zapremine već i raspodele padavina, pa su posledično sve češće smene perioda ekstremnih vodnih deficita i suficita. Vodni deficit i suficit utiču na rast i razvoj biljaka tako što dovode do inhibicije fotosinteze, oksidativnih oštećenja ćelijskih komponenti te promena u respiraciji. Cilj ove disertacije je bio da se utvrde efekti vodnog suficita i deficita na fiziološke, oksidativne i antioksidativne parametre kod dva hibrida kukuruza (ZP 555 i ZP 606). Vodnom suficitu su podvrgnute biljke u trajanju od 6, 24, 72 i 144 sati, a vodnom deficitu u trajanju od 8 i 15 dana, sa odgovarajućim kontrolnim biljkama. Listovi kontrolnih i tretiranih biljaka su korišteni za određivanje sledećih parametara: fizioloških (relativnog sadržaja vode (RWC), koncentracije fotosintetičkih pigmenata, solubilnih proteina, slobodnog prolina), oksidativnih (koncentracije malondialdehida – MDA i H2O2) i antiokdiativnih (neenzimskih - koncentracija polifenola, i enzimskih komponenti - aktivnosti antioksidativnih enzima: superoksid dismutase (SOD, EC 1.15.1.1), katalaze (CAT, EC 1.11.1.6), askorbat peroksidaze (APX, EC 1.11.1.11) i peroksidaza Klase III (POX, EC 1.11.1.7)). Rezultati dobijeni izlaganjem biljaka vodnom suficitu i deficitu su pokazali različit odgovor hibrida na poplavu i sušu i značajne interhibridne razlike kada je u odgovor na poplavu ili sušu. Promene u procesu fotosinteze su detektovane kroz promene koncentracije fotosintetičkih pigmenata. Pri uslovima vodnog suficita izmeren je porast koncentracije hlorofila a i b, te karotenoida kod hibrida ZP 555. Sa druge strane, smanjena koncentracija hlorofila b i karotenoida izmerena je kod hibrida ZP 606 nakon 24 sata vodnog suficita. Hibrid su imali istovetan odgovor na vodni deficit, gde je detektovano smanjenje koncentracije hlorofila a i karotenoida te povećanje koncentracije hlorofila b. Kao posledica vodnog suficita detektovana je i povećana koncentracija solubilnih proteina kod oba ispitivana hibrida. Viši nivoi oksidativnog stresa pri uslovima vodnog suficita su vidljivi kroz povećanu proizvodnju vodonik peroksida kod hibrida ZP 555. Vodni suficit je za posledicu imao veću aktivnost SOD i POX, te povećanu koncentraciju ukupnih polifenola kod oba ispitivana hibrida. Sistem polifenoli/POX kod hibrida ZP 606, pri uslovima vodnog suficita, omogućio je ovom hibridu da brzo i efikasno ukloni povećane koncentracije vodonik peroksida. Sa druge strane, pri uslovima vodnog deficita detektovano je smanjenje koncentracije solubinih proteina i prolina. Smanjenje koncentracije prolina, pri vodnom deficitu ima za posledicu disbalans u osmotskom potencijalu biljne ćelije. Osetljivost testiranih hibrida na vodni deficit je uočljiva pri prolongiranom izlaganju ovom stresu, koji je za posledicu imalo povećanje koncentracije vodonik peroksida (kod hibrida ZP 555) i stepena lipidne peroksidacije (kod oba hibrida). Sa druge strane, povećane aktivnosti SOD, CAT i POX su izmereni kod hibrida ZP 555 pri izlaganju vodnom deficitu. Antioksidativni odgovor hibrida ZP 606 na stres izazvan vodnim deficitom je bio u smislu povećanja aktivnosti SOD. Smanjena koncentracija polifenola izmeren je kod oba ispitivana hibrida pri uslovima vodnog deficita. Smanjenje koncentracije MDA i H2O2, povećanje aktivnosti antioksidativnih enzima zajedno sa povećanjem koncentracije neenzimskih komponenti, te akumulacija osmoprotektanata se može uzeti kao marker za određivanje tolerantnih genotipova biljaka. Tako, veća antioksidativna aktivnost, zajedno sa smanjenom koncentracijom H2O2 može predstavljati bolju adaptiranost i tolerantnost hibrida ZP 606 na vodni suficit u odnosu na hibrid ZP 555. Sa druge strane, povećana koncentracija MDA, smanjena sinteza proteina, te slobodnog prolina, kao i smanjena koncentracija polifenola vodi ka zaključku da su oba ispitivana hibrida kukuruza podjednako neotporna na stres izazvan vodnim deficitom u uslovima trajanja suše od 15 dana kod biljaka starosti 30 dana. , Plants are continuously challenged by the rising incidence of drought and flooding as a consequence of global warming. These stresses may cause severe depression in the plant’s growth by inhibiting photosynthesis, inducing oxidative cell damage, and cell respiration changes. The present work aimed to study the effect of flooding and drought stress on physiological, oxidative, and antioxidative parameters in leaves of two maize hybrids (ZP 555 and ZP 606). Maize plants`leaves at the stage of three fully developed leaves were harvested after 6, 24, 72, and 144 hours of applied flooding stress and after 8 and 15 days after applied drought stress. Leaves from experimental plants and control plants were used for the determination of physiological (relative water content (RWC), the content of photosynthetic pigments and soluble proteins, proline), oxidative stress parameters (the content of malondialdehyde (MDA) and H2O2), as well as antioxidants (the total polyphenols content (Phe), and activity of antioxidative enzymes [catalase (CAT, EC 1.11.1.6), superoxide dismutase (SOD, EC 1.15.1.1), ascorbate peroxidases (APX, EC 1.11.1.11), and Class III peroxidases (POX, EC 1.11.1.7)]). Results indicated that drought and flooding stress-induced time-dependent changes of measured parameters and those hybrids differ in stress response. Changes in photosynthesis can be seen thought modifications in photosynthetic pigments concentration. An increase in the concentration of chlorophylls and carotenoids have been noted during flooding in ZP 555 hybrids. On the other hand, flooding stress decreased the chlorophyll b and carotenoid concentrations in ZP 606 hybrids. A decrease in the concentration of chlorophyll a and carotenoids and an increase in chlorophyll b concentration were a response of both examined hybrids on drought stress. Also, intensive protein synthesis was noted in both hybrids during flooding. More intensive oxidative stress levels were correlated with an increase in H2O2 in hybrid ZP 555. Induced SOD and POX activities and concentration of polyphenols were detected in both hybrids during flooding stress. Polyphenols/POX system provided faster hydrogen peroxide displacement cells of ZP 606 hybrids. On the other hand, a decline in the concentration of soluble proteins and proline was drought-stress induced. The drought-induced decrease in proline concentration caused a disbalance in cell osmotic potential. The sensitivity of the tested hybrids to water deficit was noted during the prolongation of this stress, which caused an increase in the hydrogen peroxide concentration (in hybrids ZP 555) and lipid peroxidation (in both hybrids). Moreover, a drought-induced increase in the activity of antioxidative enzymes, SOD (both hybrids), CAT and POX (only ZP 555) was noted. A decline in the concentration of polyphenols caused by drought stress makes both hybrids drought sensitive. The decrease in the concentration of MDA and H2O2, followed by an increase in activity in antioxidative enzymes and concentration of nonenzymic, together with an increase in osmoprotectants accumulation, presents valuable tools for the selection of flooding/drought -tolerant plants. The present study results suggest that a more robust antioxidative metabolism is essential under flooding stress and could be a protective strategy against oxidative damage induced by flooding in ZP 606 maize plants compared to ZP 555 plants. On the other hand, enlarge in the concentration of MDA, followed by a decrease in protein, proline and polyphenols concentration, suggests that both tested 30 days old hybrids are defenceless against oxidative damage induced by 15-days drought stress.
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- 2021
47. Uloga dva nanokompozita fulerenol/doksorubicin i fulerenol/gvožđe kod toksičnih efekata izazvanih doksorubicinom
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Seke, Mariana, Andrić, Nebojša, Đorđević, Aleksandar, Kojić, Danijela, Purać, Jelena, Marković, Jelena, and Srdić, Vladimir
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antioksidativni enzimi ,tkivo srca ,hepatotoxicity ,nano drug delivery ,cardiotoxicity ,heart tissue ,fulerenoll/iron nanokomposite ,nanokarakterizacija ,kardiotoksičnost ,hepatotoksičnost ,tkivo jetre ,citotoksičnost ,liver tissue ,antioxidative enzimes ,apoptosis ,ćelijski ciklus ,fulerenoll/doxorubicin nanokomposite ,nanodostava lekova ,cytotoxicity ,cell cycle ,fulerenol/gvožđe nanokopozit ,fulerenol/doksorubicin nanokompozit, fulerenol/gvožđe nanokopozit, nanokarakterizacija, citotoksičnost, ćelijski ciklus, kardiotoksičnost, hepatotoksičnost, nanodostava lekova, tkivo srca, tkivo jetre, antioksidativni enzimi, apoptoza ,fulerenoll/doxorubicin nanokomposite, fulerenoll/iron nanokomposite, nanocharacterisation, cytotoxicity, cell cycle, cardiotoxicity, hepatotoxicity, nano drug delivery, heart tissue, liver tissue, antioxidative enzimes, apoptosis ,apoptoza ,fulerenol/doksorubicin nanokompozit ,nanocharacterisation - Abstract
Tumori predstavljaju drugi vodeći uzrok smrti u svetu (posle kardiovaskularnih bolesti) i procena je da će učestalost pojave tumora u budućnosti porasti. Hemioterapija je jedna od najčešće korišćenih metoda lečenja tumora koju često prate sporedni sistemski štetni efekti. S obzirom da lečenje tumora jednim terapeutskim agensom često rezultuje ograničenim kliničkim ishodom, kombinovane terapije mogu sinergistički podići nivo antitumorske aktivnosti, dok sniženjem doze svakog pojedinačnog agensa se mogu umanjiti štetni efekti. Istovremena aplikacija različitih terapeutskih agenasa zahteva dostavnu platformu kako bi se omogućila normalizacija farmakokinetike i farmakodinamike agenasa. Fulerenol C60(OH)24 predstavljaju pogodnu platformu za dostavu lekova zbog svojih fizičko-hemijskih i bioloških karakteristika. U vodenom rastvoru fulerenol se nalazi u obliku negativno naelektrisanih polianjonskih nanočestica koje poseduju veliku površinu i imaju mogućnost vezivanja pozitivno naelektrisanih hemioterapeutika kao što je doksorubicin (DOX), kao i pozitivnih jona metala, u ovom slučaju Fe2+. Osnovna biološka karakteristika fulerenola je da ima ulogu antioksidativnog agensa. U ovom radu iskorišćene su fizičkohemijske osobine fulerenolskih nanočestica (FNP), DOX-a i Fe2+ u cilju formiranja stabilnih nanokompozita FNP/DOX i FNP/Fe2+. Nanokompoziti su okarakterisani različitim fizičkohemijskim metodama, pri čemu je ustanovljeno da su čestice nanokompozita FNP/DOX veličine između 20 i 58 nm, naelektrisanja od -6 mV, čestice nanokompozita FNP/Fe2+ veličine između 11 i 60 nm, naelektrisanja od -30.8 mV, i diskoidalne morfologije. Oba nanokompozita imaju dobru stabilnost u vodenom rastvoru, što ih čini biokompatibilnim i pogodnim za primenu u biomedicini. FNP dekorisan DOX-om, u obliku nanokompozita FNP/DOX, omogućava značajno obimniji unos DOXa u ćelije i smanjuje procenat ćelija u G2M fazi ćelijskog ciklusa, u odnosu na samostalnu primenu DOX-a, kod malignih ćelijskih linija dojke. DOX se u terapiji tumora koristi poslednjih četrdeset godina i još uvek predstavlja nezaobilazan lek u onkologiji. Njegovo dugotrajno korišćenje izaziva oksidativni stres, što za posledicu ima pojavu kardiomiopatije i hepatopatije. Kardio i hepatotoksičnost nanokompozita FNP/DOX u odnosu na komercijalni DOX ispitana je na odraslim muţacima pacova soja Wistar. Ultrastrukturna analiza tkiva srca i jetre pokazala je da tretman DOX dovodi do oštećnja pojedinih ćelijskih kompartmana, kao što su mitohondrije, miofibrili, kompromituje integritet sarkoleme i dovodi do hiperkontrakcije sarkomera, unutarćeliskog edema, vakuolizacije citoplazme, pojave mijelinskih figura, autofagozoma i mikrovezikularnih masnih promena. Nanokompozit FNP/DOX izaziva manje štetnih promena na srcu i jetri zdravih pacova soja Wistar, u poreĊenju sa komercijalnim DOX-om, pri ĉemu je doza od 4 mg/kg postigla bolji efekat nego doza od 2 mg/kg. Na molekularnom nivou, kvantifikovana je ekspresija gena: Bax i Bcl-2 koji uĉestvuju u apoptozi, kao i katalaza i mangan superoksid dismutaza(MnSOD), koji uĉestvuju u odgovoru ćelije na oksidativni stres. Nanokompozit FNP/DOX menja gensku ekspresiju antioksidativnih enzima, ukazujući na prisustvo manjeg oksidativnog stresa u tkivu srca i jetre, u poreĊenju sa dejstvom komercijalnog DOX. Nanokompozit FNP/DOX u tkivu srca, menja i gensku ekspresiju ključnih enzima apoptoze, Bax i Bcl-2, pri čemu inicira povećanu transkripciju antiapoptotskog Bcl-2 gena, omogućavajući ćellijama da se odupru programiranoj ćelijskoj smrti. Promene ekspresije iRNK za dva antioksdataivna gena kao i za dva gena koja učestvuju u apoptozi, u srcu i jetri, ne mogu da ukažu na jasan mehanizam preko koga FNP/DOX izaziva manje štetnih promena na srcu i jetri zdravih pacova soja Wistar, u poređenju sa komercijalnim DOX-om. Kardiotoksičnost doksorubicina se pripisuje slobodnoradikalskom oksidativnom stresu zasnovanom na gvožđu. Hidroksil radikal, direktno je odgovoran za oštećenja na DNK i nastaje u reakciji H2O2 i O2•− koja je katalizovana jonima gvožđa (Fe2+). Dodatno, kada se DOX veže za iRNK koja kodira feritin dolazi do modifikacije ekspresije feritina što utiče na metabolizam i homeostazu gvožđa. Stoga, helatori gvožđa mogu interferirati sa DOX na mnogo složeniji način nego što je Fentonova reakcija. U ovoj tezi iskorišćene su helatorske sposobnosti FNP da za sebe veže jone gvožđa u formi nanokompozita FNP/Fe2+ i ispitani su njegovi biološki efekti in vivo na pacovima soja Wistar. Nanokompozit FNP/Fe2+ u predtretmanu 1h pre primene DOX-a, je pokazao da izaziva manje štetnih promena na srcu i jetri zdravih pacova soja Wistar, u poređenju sa komercijalnim DOX-om. Rezultati na nivou genske ekspresije, prilikom primene nanokompozita FNP/Fe2+ u predtretmanu 1h pre doksorubicina, za dva antioksdataivna gena u srcu i jetri, ne mogu da ukaţu najasan mehanizam preko koga nanokompozit FNP/Fe2+ izaziva manje štetnih promena na srcu i jetri zdravih pacova soja Wistar, u poređenju sa komercijalnim DOX-om. Sveukupno gledano ovo istraživanje je omogućilo detaljniji uvid u kompleksnu interakciju između fulerenolskih nanočestica, doksorubicina, Fe2+ i ćelija, kako malignih tako i zdravih. Pokazan je protektivni potencijal fulerenolskih nanočestica kada se kombinuju sa citostatikom doksorubicinom i sa Fe2+, a što može imati pozitivne implikacije prilikom dizajniranja antitumorskih lekova., Tumors are the second leading cause of death in the world (following cardiovascular diseases) and it is estimated that the incidence of tumors will increase in the future. Chemotherapy is one of the most common methods of tumor treatment which is often accompanied by systemic side effects. Treatment of tumors with one therapeutic agent often results in limited clinical outcome. Combination therapy, using a variety of agents and modalities of action, can synergistically increase thelevel of antitumor activity, lowering the dose of each single agent and thus reduce adverse side effects. The simultaneous application of various therapeutic agents requires a delivery platform to enable normalization of agents’ pharmacokinetics and pharmacodynamics. Because of its physico-chemical and biological activities,fullerenol C60(OH)24 represents a suitable platform for drug delivery. In the aqueous solution fullerenol is in the form of negatively charged polianionic nanoparticles (FNP) that possess a large surface area and have the ability of binding positively charged chemotherapeutic drug, such as doxorubicin (DOX), as well as positively charged metal ions, particularly Fe 2+ . The main biological activity of fullerenol is manifested through its antioxidant activity. In this study we usedphysico-chemical properties of fullerenol, doxorubicin and iron (Fe2+ ) in order to form stable fullerenol/doxorubicin (FNP/DOX) nanocomposite and fulerenol/iron (FNP/Fe 2+) nanocomposite. The nanocomposites were characterized by different physical- chemical methods which showed that FNP/DOX has particle size between 20 nm and 58 nm and charge of -6 mV, while FNP/Fe 2+ has particle size between 11 nm and 60 nm and charge of -30.8 mV. Both nanocomposites revealed discoidal morphology. The nanocomposites have also displeyed good stability in aqueous systems, which makethem biocompatible and suitable for use in biomedical applications. FNP decorated with DOX, in the form of FNP/DOX nanocomposite, allows significantly more extensive DOX uptake into cells and reduces the percentage of cells in the G2M phase of the cell cycle, compared to the independent application of DOX, in malignant breast cell lines. DOX has been used in the treatment of cancer for the last forty years and still represents an irreplaceable drug in oncology. Its longterm use leads to cardiomyopathy and hepatopathy, while its main mechanism of toxicity is induction of oxidative stress. Cardio and hepatotoxicity of FNP/DOX nanocomposite in comparison to DOX was tested on healthy adult male Wistar rats. Ultrastructural analysis of heart and liver tissues revealed that treatment with DOX induced injuries within different cell compartments, such as: mitochondria, myofibrils and nucleai. Compromised integrity of sarcolemma, hypercontraction of sarcomeres, interstitial edema, and vacuolization of the cytoplasm, presence of myelin figures, autophagosomes and microvascular fatty changes have also been observed. Contrary to these findings, FNP/DOX nanocomposite induced significantly less injury to the heart and liver tissues compared to DOX, with a dose of 4 mg /kg FNP/DOX achieving a better effect than a dose of 2 mg /kg. At the molecular level, the expression of the genes: Bax and Bcl-2, which participate in apoptosis, as well as catalase and manganese superoxide dismutase (MnSOD), which participate in the cell's response to oxidative stress, has been quantified. FNP/DOX nanocomposite changed the gene expression levels of the antioxidant enzymes indicating the presence of decreased oxidative stress in heart and liver tissues in comparison with DOX. Furthermore, FNP/DOX nanocomposite in heart tissue changed gene expression levels of enzymes involved in apoptosis, Bax and Bcl-2; it increased transcription levels of theantiapoptotic Bcl-2 gene, enabling cells to resist to the programmed cell death. Changes in mRNA expression for two antioxidant genes as well as for two genes involved in apoptosis, in the heart and liver tissues, cannot indicate a clear mechanism by which FNP/DOX causes less harmful effects in the heart and liver of healthy Wistar rats, compared to DOX applied alone. Cardiotoxicity of DOX is attributed to iron-based free radical oxidative stress. The hydroxy radical is directly responsible for DNA damage and is formed in the reaction of H2O2 and O2 • - which is catalyzed by iron ions (Fe 2 + ). Additionally, when DOX binds to mRNA encoding ferritin, ferritin expression is modified, which affects iron metabolism and homeostasis. Therefore, iron chelators can interfere with DOX in a much more complex way than the Fenton reaction. In this thesis, the chelation characteristics of FNP to bind iron ions in the form of FNP/Fe 2+ nanocomposite were used and its biological effects in vivo on Wistar rats were examined. At the ultrastructural level, FNP/Fe 2 + nanocomposite in pretreatment 1h before DOX administration was shown to cause less detrimental changes to the heart and liver tissues of healthy Wistar rats, compared to DOX applied alone. At the level of gene expression, FNP/Fe 2+ nanocomposite in pretreatment 1h before DOX administration, for two antioxidant genes in the heart and liver tissues, cannot indicate a clear mechanism through which FNP/Fe 2 + anocomposite causes less harmful effects in heart and liver. Overall, this research has enabled a more detailed insight into the complex interaction between fullerenol nanoparticles,doxorubicin, Fe 2+ and cells, both malignant and healthy. This experimental setup has provided an opportunity for a better understanding of the protective potential of fullerenol nanoparticles when combined with cytostatic DOX and Fe 2+ which may have positive implications during drug design.
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- 2021
48. Biohemijski i fiziološki parametri stanja medonosne pčele (Apis mellifera L.) tokom letnjeg i zimskog perioda na staništima sa različitim antropogenim uticajem
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Orčić, Snežana, Kojić, Danijela, Purać, Jelena, Plavša, Nada, and Blagojević, Duško
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insect immunity ,entometabolomics ,Honey bee ,imunitet insekata ,oksidativni stres ,Medonosna pčela ,metabolomika insekata ,oxidative stress ,Medonosna pčela, oksidativni stres, imunitet insekata, metabolomika insekata ,Honey bee, oxidative stress, insect immunity, entometabolomics - Abstract
Medonosna pčela (Apis mellifera Linnaeus, 1758) je široko rasprostranjena vrsta iz grupe socijalnih insekata, glavni oprašivač mnogih divljih biljaka i poljoprivrednih kultura. Pored njene primarne uloge u oprašivanju, koristi se i za dobijanje pčelinjih proizvoda, pre svega meda, voska i propolisa, čime se dodatno naglašava njen privredni značaj. Uzimajući u obzir značaj medonosne pčele, a sa druge strane aktuelan problem pada broja kolonija, postoji potreba za razumevanje uzroka i procenu rizika koji leže u osnovi ovog kompleksnog problema. Stoga, istraživanja u ovoj doktorskoj disertaciji obuhvataju praćenje biohemijskih i fizioloških parametara kod medonosne pčele kao pokazatelja stanja pčelinjih zajednica tokom letnjeg i zimskog perioda na staništima sa različitim antropogenim uticajem. U prvoj fazi istraživanja su izvedeni akutni laboratorijski testovi izlaganja medonosne pčele subletalnim dozama pesticida, tiakloprida i klotianidina, a dobijeni rezultati su ukazali na narušenu neurotransmisiju, na izmene u aktivnosti antioksidativnih enzima i redoks statusa u ćeliji, kao i na imunosupresiju. U drugoj fazi istraživanja su analizirane kolonije medonosne pčele sa različitih lokaliteta na području AP Vojvodine, sa primenom stacionarnog i migratornog tipa pčelarenja, tokom letnjeg i zimskog perioda, a dobijeni rezultati su ukazali na značajne razlike u biohemijskom odgovoru medonosne pčele u zavisnosti od starosti pčela, sezone godine i tipa pčelinjaka. Na osnovu rezultata prethodne dve faze istraživanja, izvršen je odabir uzoraka, kao i izbor parametara za treću fazu istraživanja, gde je praćeno stanje medonosne pčele iz stacionalnih pčelinjih zajednica, tokom letnjeg aktivnog perioda, kao i početkom i krajem zimskog perioda mirovanja pčela, sa tri lokaliteta u Republici Srbiji sa različitim stepenom urbanizacije i industrijalizacije: Beograd kao urbano, Susek kao ruralno i Zajača kao industrijsko područje. Dobijeni rezultati su ukazali na značajne razlike u zavisnosti od sezone godine, kao i lokaliteta sa različitim antropogenim uticajem. Zimske pčele, krajem perioda mirovanja u odnosu na početak mirovanja, karakteriše viši nivo antioksidativne zaštite, udružen sa visokim stepenom oksidativnih oštećenja, zatim bolja imunokompetencija, kao i niske energetske rezerve u masnom telu. Sezonskim povećanjem temperatura tokom godine povećava se sadržaj zasićenih, dok se smanjuje udeo nezasićenih masnih kiselina, gde se oleinska 18:1(9) kiselina izdvaja kao dominantna komponenta u ukupnom sadržaju masnih kiselina masnog tela pčela sa sve tri lokacije, tokom sva tri perioda. Niži nivo ukupnih ugljovodonika je još jedna fiziološka karakteristika zimskih pčela. Takođe, zapažene su promene i u neurotransmisiji holinergičkog tipa tokom sezone, sa višim aktivnostima acetilholinesteraze kod pčela krajem zime i tokom leta. Metabolomičkom analizom hemolimfe pčela je identifikovano 125 metabolita, uključenih u 36 metaboličkih puteva, gde se kao biomarkeri od značaja za razlikovanje letnjih i zimskih pčela izdvajaju metaboliti u metabolizmu glicerolipida i aminokiseline glicin, cistein, glutamin, fenilalanin, prolin i lizin. Poređenjem dobijenih rezultata između različitih lokaliteta, pčele iz Beograda se izdvajaju sa nižim nivoom oksidativnog stresa, nižim aktivnostimaacetilholinesteraze, kao i fenol oksidaze i glukoza oksidaze, ključnih enzima u imunom odgovoru pčela. Pčele iz Suseka su se izdvojile sa najvećom masom masnog tela, što ukazuje na dobre nutritivne i energetske rezerve u pčelama tokom zime i leta, dok se Beograd izdvaja sa značajno višim udelom nezasićenih masnih kiselina u masnom telu pčela. Takođe su zabeležene razlike u relativnoj zastupljenosti n-alkana u pčelama sa različitih lokaliteta, te je u Beogradu najzastupljeniji nonakozan (C29), dok je heptakozan (C27) najzastupljeniji u uzorcima pčela iz Suseka i Zajače. Analizom sadržaja metala u pčelama, pergi i medu, zapažamo da svaku sredinu karakteriše specifičan profil zagađenja, kao i da je u medu znatno niža koncentracija svih analiziranih metala. Dobijeni rezultati pružaju dobru osnovu za dalja ispitivanja biološkog odgovora medonosne pčele, u pogledu uticaja faktora okruženja, a time i dalje definisanje odgovarajućih mera zaštite pčelinjih zajednica., The honey bee (Apis mellifera Linnaeus, 1758) is a‚widespread social insect species and the main pollinator of various wild plants and agricultural crops.In addition to its primary role in pollination, the honey bee is also used for obtaining honeybee products, mostly honey, wax, and propolis, with a significant role in the economy. Number of honey bee colonies is declining, thus necessitating the assessment of underlying reasons and risks. Therefore, in this doctoral dissertation, biochemical and physiological parameters in the honey bee were monitored as indicators of the colonies’ condition during the summer and winter period in habitats with different anthropogenic impacts. In the first phase of the research, acute laboratory tests of honey bee exposure to sublethal doses of pesticides (thiacloprid and clothianidin) were performed and the obtained results indicated impaired neurotransmission, changes in the activity of antioxidant enzymes, and redox status in the cell, as well as immunosuppression. In the second phase of the research, honey bee colonies from different localities in the area of AP Vojvodina were analyzed, using the stationary and migratory types of beekeeping, during the summer and winter period, and the obtained results indicated significant differences in the biochemical response of the honey bee depending on the age of the bees, the season of the year, and the type of apiary. Based on the results of the previous two phases of the research, the selection of samples was performed, as well as the selection of parameters for analysis within the third phase of the research, where the condition of honey bees from stationary bee communities was monitored during the summer active period, as well as the beginning and end of winter dormancy of bees, from three localities in the Republic of Serbia with different degrees of urbanization and industrialization: Belgrade as urban, Susek as rural andZajaca as industrial area. The obtained results indicated significant differences depending on the season of the year, as well as the location with different anthropogenic influence. Older winter bees are characterized by a higher level of antioxidant protection, associated with a high degree of oxidative damage, better immunocompetence, as well as lowenergy reserves in the fat body. The seasonal increase in the temperature during the year increases the content of saturated while decreasing the ratio of unsaturated fatty acids, where oleic 18:1(9) acid stands out as the dominant component in the total fatty acid content of bee body fat from all three locations, during all three periods. The lower level of total hydrocarbons is another physiological characteristic of winter bees. Also, changes in cholinergic neurotransmission were observed during the season, with higher acetylcholinesterase activities in bees in late winter and summer. Metabolomic analysis of bee hemolymph identified 125 metabolites,included in 36 metabolic pathways, where metabolites in the metabolism of glycerolipids and amino acids glycine, cysteine, glutamine, phenylalanine, proline, and lysine stand out as biomarkers of importance for distinguishing summer and winter bees. By comparing the obtained results between different localities, honey bees from Belgrade stand out with lower levels of oxidative stress, lower activities of acetylcholinesterase as well as phenoloxidase and glucose oxidase, key enzymes in the immune response of bees. The honey bees from Susek had the largest mass of the fat body, which indicates good nutritional and energy reserves in bees during winter and summer, while the honey bees from Belgrade were shown to have a significantly higher ratio of unsaturated fatty acids in the fat body of bees during the year. There were also differences in the relative prevalence of n-alkanes in honey bees from different localities, nonacosane (C29) being the most common in Belgrade, while heptacosane (C27) is most prevalent in honey bee samples from Susek and Zajaca. By analyzing the metal content in honey bees, perga, and honey, it was noted that each environment is characterized by a specific pollution profile, as well as that the concentration of all analyzed metals in honey is significantly lower compared to samples of bees and perga. The obtained results provide a good basis for further studies of the biological response of the honey bee, in terms of the influence of the environmental factors, enabling further defining of appropriate measures for the protection of honey bee colonies.
- Published
- 2020
49. Analysis of 8-hydroxy-2-deoxyguanosine, lipid peroxidation products and activity of antioxidative enzymes in precancerous lesions and in cervical cancer
- Author
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Jelić, Marija, Srđenović-Čonić, Branislava, Mandić, Aljoša, Đurđević, Srđan, Suđi, Jan, and Purać, Jelena
- Subjects
antioksidansi ,Tumor ,tumorski biomarkeri ,lipidna peroksidacija ,Uterine Cervical Neoplasms ,lokalna rekurencija tumora ,Prognosis ,Antioxidants ,prognoza ,stadijum neoplazmi ,Oxidative Stress ,Neoplasm Recurrence ,Local ,oksidativni stres ,Lipid Peroxidation ,neoplazme grlića materice ,Biomarkers ,Neoplasm Staging - Abstract
U organizmu se, pod fiziološkim uslovima, produkuju slobodni radikali. Iako se u organizmu nalaze u veoma niskoj koncentraciji, slobodni radikali mogu ispoljiti toksične efekte. Težeći da spare elektrone, u hemijskoj reakciji oksidacije, dolazi do brzog i nepredvidivog vezivanja za susedne molekule, proteine, lipide, ugljene hidrate i nukleinske kiseline od kojih su sačinjeni strukturni elementi ćelije, pokrećući unutrašnji put apoptoze. Antioksidansi su supstance koje sprečavaju ili značajno smanjuju oksidaciju biomolekula. Oksidativni stres je stanje koje nastaje kada produkcija slobodnih radikala premaši kapacitete antioksidativnih enzima da ih neutrališu. U antioksidativne enzime spadaju: superoksid dismutaza (SOD), katalaza (CAT), glutation peroksidaza (GPx), glutation reduktaza (GR) i glutation-S-transferaza (GST). Lipidna peroksidacija (LP) je proces oksidacije višestruko nezasićenih masnih kiselina od strane slobodnih radikala. Malondialdehid predstavlja biohemijski marker pomoću kog je moguće meriti stepen oksidativnog oštećenja ćelijskih membrana. Oksidativna modifikacija DNK dovodi do promene strukture DNK koje rezultuju genetskim oštećenjima. Najčešće korišćen marker oksidativnog stresa je urinarni 8-hidroksi-2-deoksiguanozin (8-OHdG). Oštećenja proteina, lipida, DNK čine važan osnov mnogih oboljenja kao što su ateroskleroza, neurodegenerativna oboljenja, dijabetes, gojaznost, proces starenja, retinopatija, hronične inflamatorne bolesti i karcinom. Polazeći od hipoteze da su ovi biomolekuli različiti u različitim stadijumima bolesti, oni bi mogli predstavljati prognostički marker proširenosti bolesti. Cilj istraživanja je bio da se ispita da li postoje razlike između kontrolne grupe (zdravih žena), pacijentkinja sa prekanceroznim lezijama na grliću materice (HSIL), pacijentkinja sa lokalno ograničenim (FIGO Ia-Ib) i pacijentkinja sa lokalno uznapredovalim karcinomom grlića materice (IIa-IV) u pokazateljima oštećenja DNK (određivanjem vrednosti 8-OHdG), pokazateljima oksidativnog stresa (određivanjem intenziteta lipidne peroksidacije (TBARS)), pokazateljima antioksidativne odbrane (određivanjem aktivnosti antioksidativnih enzima superoksid dismutaze (SOD), katalaze (CAT), glutation peroksidaze (GPx), glutation reduktaze (GR) i glutation-S-transferaze (GST)). Pored toga, cilj istraživanja je bio da se uporede vrednosti 8-OHdG, proizvoda lipidne peroksidacije (TBARS) i aktivnosti antioksidativnih enzima (SOD, CAT, GST, GPx, GR) unutar grupe pacijentkinja sa lokalno ograničenim karcinomom grlića materice podeljenih u dve podgrupe sa niskim i visokim rizikom u odnosu na relaps bolesti. Takođe, u radu je koreliran nivo 8-OHdG, MDA i antioksidativnih enzima sa relapsom bolesti. Istraživanje je izvedeno na Klinici za operativnu onkologiju, odeljenje za ginekologiju na Institutu za onkologiju Vojvodine, Zavodu za farmaciju Medicinskog fakulteta u Novom Sadu i Zavodu za zdravstvenu zaštitu radnika Novi Sad u periodu od 2013. godine do 2017. godine. Od ispitanica su prikupljani uzorci krvi i urina, pripremljeni na adekvatan način i čuvani na -80° do analiza. Aktivnost enzima antioksidativne zaštite, kao i intenzitet lipidne peroksidacije određivani su spektrofotometrijskim metodama, a koncentracija 8-OhdG određivana je gasnom hromatografijom uz masenu detekciju. Za sprovođenje istraživanja dobijena je saglasnost Etičkog odbora Instituta za onkologiju Vojvodine. Pokazano je da postoje statistički značajne razlike između kontrolne grupe (zdravih žena), pacijentkinja saprekanceroznim lezijama na grliću materice (HSIL), pacijentkinja sa lokalno ograničenim (FIGO Ia-Ib) u odnosu napacijentkinje sa lokalno uznapredovalim karcinomom grlića materice (IIa-IV) u pokazateljima oštećenja DNK (koncentracija 8-OHdG), pokazateljima oksidativnog stresa (intenziteta lipidne peroksidacije (TBARS)), pokazateljima antioksidativne odbrane (aktivnosti antioksidativnih enzima SOD, CAT i GST). Nisu pokazane razlike između ispitivanih grupa u aktivnosti enzima glutation peroksidaze (GPx) i glutation reduktaze (GR). Nisu pronađene razlike u koncentraciji 8-OHdG, proizvoda lipidne peroksidacije (TBARS) i aktivnosti antioksidativnih enzima (SOD, CAT, GST, GPx i GR) unutar grupe pacijentkinja sa lokalno ograničenim karcinomom grlića materice podeljenih u dve podgrupe sa niskim i visokim rizikom u odnosu na relaps bolesti. Aktivnosti CAT i GST bile najbolji prediktori rekurencije bolesti kod definisanih pacijentkinja. Na osnovu aktivnosti ova dva oksidativna enzima, separacija grupe pacijentkinja kod kojih nije došlo do rekurencije bolesti nakon perioda praćenja od ostale dve grupe kod kojih je došlo do rekurencije bolesti je bila moguća. Na osnovu dobijenih rezultata zaključuje se da je moguće koristiti navedene biomarkere kao dijagnostičke markere kod pacijentkinja sa karcinomom grlića materice. Ovi biomolekuli mogu pomoći lakšem svrstavanju pacijentkinja u određene grupe prema stadijumu bolesti, a sledstveno i bržem odabiru odgovarajućeg lečenja. Pored toga, pokazano je da su aktivnosti enzima CAT i GST prediktori rekurencije bolesti kod definisanih grupa pacijentkinja. Free radicals are produced in our body under physiological conditions. Although in very low concentrations, they can show some toxic effects. While trying to bind electrons, in the chemical reaction of oxidation, they rapidly and unpredictably bind to adjacent molecules- proteins, lipids, carbohydrates and nucleic acids from which the structural elements of the cell are made, triggering the internal pathway of apoptosis. Antioxidants are substances that prevent or significantly reduce the oxidation of biomolecules. Oxidative stress is a condition that occurs when the production of free radicals exceeds the capacity of antioxidant enzymes to neutralize them. The antioxidant enzymes include: superoxide dismutase (SOD), catalase (CAT), glutathione peroxidase (GPx), glutathione reductase (GR), and glutathione-S-transferase (GST). Lipid Peroxidation (LP) is the process of oxidation of polyunsaturated fatty acids by free radicals. Malondialdehyde is a biochemical marker by which it is possible to measure the degree of oxidative damage of cell membranes. The oxidative modification of DNA leads to a change in DNA structure that results in genetic damage. The most commonly used marker of oxidative stress is urinary 8-hydroxy-2-deoxiguanosine (8-OHdG). The damage to proteins, lipids and DNA is an important basis for many diseases such as atherosclerosis, neurodegenerative diseases, diabetes, obesity, aging, retinopathy, chronic inflammatory disease and cancer. Starting from the hypothesis that these biomolecules are different at different stages of the disease, they could represent a prognostic marker of the progression of the disease. The aim of the study was to examine whether there were differences between the control group (healthy women), the patients with precancerous lesions on the cervix (HSIL), the patients with early stage cervical cancer (FIGO Ia-Ib) and the patient with locally advanced cervical cancer (IIa - IV) in the indicators of DNA damage (determining the value of 8-OHdG), indicators of oxidative stress (by determining the lipid peroxidation intensity (TBARS)), indicators of antioxidant defense (by determining the activity of antioxidative enzymes of superoxide dismutase (SOD), catalase (CAT), glutathione peroxidase GPx), glutathione reductase (GR), and glutathione-S-transferase (GST)). In addition, the aim of the study was to compare the values of 8- OHdG, lipid peroxidation products (TBARS) and the activity of antioxidant enzymes (SOD, CAT, GST, GPx, GR) within the group of patients with early stage cervical cancer divided into two subgroups- with low and high risk in relation to the relapse of the disease. The research was performed at the Clinic for operative oncology, Department of Gynecology at the Institute of Oncology of Vojvodina, Medical Faculty in Novi Sad, Department of Pharmacy and the Institute for Health Care of Novi Sad in the period from 2013 to 2017. Samples of blood and urine of the patients were collected, prepared adequately and stored at -80 ° until the analysis. The activity of the antioxidant enzymes as well as the lipid peroxidation were determined by spectrophotometric methods, and the concentration of 8-OHdG was determined by gas chromatography with mass detection. The approval of the Ethical Committee of the Institute for Oncology of Vojvodina was obtained before conducting the research. It has been shown that there are statistically significant differences between the control group (healthy women), patient with precancerous cervical lesions (HSIL), the patients with early stage cervical cancer (FIGO Ia-Ib) compared to a group of patients with locally advanced cervical cancer (IIa-IV) in indicators of damage to DNA (concentration of 8-OHdG), indicators of oxidative stress (lipid peroxidation (TBARS)), indicators of antioxidant defense (activities of antioxidant enzymes SOD, CAT and GST). There was no difference between the groups in activity of glutathione peroxidase enzyme (GPx) and glutathione reductase (GR). There were no differences in the concentration of 8-OHdG, lipid peroxidation products (TBARS) and the activity of antioxidant enzymes (SOD, CAT, GST, GPx and GR) within the group of patients with locally restricted cervical cancer divided into two subgroups with low and high risk in relation on relapses of the disease. CAT and GST activities were the best predictors of disease recurrence among defined groups. Based on the activities of these two oxidative enzymes, the separation of the group of patients who did not experience disease recurrence after a follow-up period from the other two groups in which recurrence of the disease occurred was possible. Based on the obtained results it is concluded that it is possible to use the studied biomarkers as diagnostic markers in patients with cervical cancer. These biomolecules can help in the patient's classification into certain groups according to the stage of the disease, and consequently the more efficient choice of appropriate treatment. In addition, CAT and GST enzyme activity have been shown to be predictors of disease recurrence in defined patient groups.
- Published
- 2019
50. Identifikacija i analiza potencijalnih supstrata i inhibitora humanih proteina podfamilije 1S aldo-keto reduktaza (AKR1C) dobijenih rekombinantnom ekspresijom
- Author
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Plavša, Jovana, Petri, Edvard, Kojić, Danijela, Blagojević, Duško, Ćelić, Anđelka, and Purać, Jelena
- Subjects
Aldo-keto reductase, inhibitors, enzymatic assay, X-ray crystallography, recombinant protein ,Aлодо-кето редуктазе, инхибитори, ензимски есеј, кристалографија Х-зрацима, рекомбинанти протеин ,Alodo-keto reduktaze, inhibitori, enzimski esej, kristalografija H-zracima, rekombinanti protein - Abstract
Истраживање има фокус на хуманим ензимима из суперфамилије алдо-кето редуктаза, које имају велики метаболички значај за хомеостатско функционисање организма. Неки од чланова подфамилије 1С алдо-кето редуктаза (AKR1C) имају улогу у развоју одређених патолошких стања, као што су леукемија, тумори простате,дојке и ендометријума, као и у смањивању ефекта хемотерапија. До сада није регистрован лек који директно утиче на протеине ове групе и самим тим је акценат на изналажењу специфичних лиганада (супстрата, инхибитора), који би могли да имају фармаколошку примену, али и на утврђивању везе између структуре и функције испитиваних лиганада према ензиму. Теза је имала фокус на протеинуAKR1C3. У овој дисертацији је представљена оптимизација ензимског есеја и испитивање потенцијалних лиганада и њиховог ефекта на ензимску активност одређених хуманих изоформи протеина из подфамилије AKR1C. Тестирана су синтетисанa стероиднa jeдињења, комерцијална једињења и биљни екстракти. Стероидни лиганди (AKR-1, -2, -3, -7, -9, -19 и -22) који су показали добре инхибиторне карактеристике су детаљније описани одређеним добијенимкинетичким параметрима и затим су кокристализовани са протеином икофакторм. Од 7 различитих комплекса протеина са најбољиминхибитором, за два комплекса су добијене дифракције са инхибитором и решене кристалне структуре са лигандом у везном месту и врло добром резолуцијом, AKR-7: 1.7 Å, AKR -19: 1.6 Å. Ови резултати представљају прве протеинске кристале чију су структуру решили истраживачи из Србије, а у научном смислу и одличну основу за даљи дизајн и тестирање једињења и кокристализације., Istraživanje ima fokus na humanim enzimima iz superfamilije aldo-keto reduktaza, koje imaju veliki metabolički značaj za homeostatsko funkcionisanje organizma. Neki od članova podfamilije 1S aldo-keto reduktaza (AKR1C) imaju ulogu u razvoju određenih patoloških stanja, kao što su leukemija, tumori prostate,dojke i endometrijuma, kao i u smanjivanju efekta hemoterapija. Do sada nije registrovan lek koji direktno utiče na proteine ove grupe i samim tim je akcenat na iznalaženju specifičnih liganada (supstrata, inhibitora), koji bi mogli da imaju farmakološku primenu, ali i na utvrđivanju veze između strukture i funkcije ispitivanih liganada prema enzimu. Teza je imala fokus na proteinuAKR1C3. U ovoj disertaciji je predstavljena optimizacija enzimskog eseja i ispitivanje potencijalnih liganada i njihovog efekta na enzimsku aktivnost određenih humanih izoformi proteina iz podfamilije AKR1C. Testirana su sintetisana steroidna jedinjenja, komercijalna jedinjenja i biljni ekstrakti. Steroidni ligandi (AKR-1, -2, -3, -7, -9, -19 i -22) koji su pokazali dobre inhibitorne karakteristike su detaljnije opisani određenim dobijenimkinetičkim parametrima i zatim su kokristalizovani sa proteinom ikofaktorm. Od 7 različitih kompleksa proteina sa najboljiminhibitorom, za dva kompleksa su dobijene difrakcije sa inhibitorom i rešene kristalne strukture sa ligandom u veznom mestu i vrlo dobrom rezolucijom, AKR-7: 1.7 Å, AKR -19: 1.6 Å. Ovi rezultati predstavljaju prve proteinske kristale čiju su strukturu rešili istraživači iz Srbije, a u naučnom smislu i odličnu osnovu za dalji dizajn i testiranje jedinjenja i kokristalizacije., This research focuses on human enzymes of the aldo-keto reductase superfamily, whose functions have a significant metabolic impact on organism homeostasis. Some members of the 1C aldo-keto reductase (AKR1C) subfamily play role in the development of specific pathological conditions, such as leukaemia, prostate cancer, breast cancer and endometrial cancer, as well as reducing the effectivness of chemotherapy. However, currently there are no approved and registered drugs that directly affect proteins from this subfamily. Therefore our main aim was to screen for specific ligands (substrates, inhibitors) with potential pharmacological applications, and to establish structure-activity relationships for these ligands and enzymes. This thesis mainly focuses on isoform AKR1C3. In this dissertation, optimization of an enzymatic assay and testing of potential ligands and their effects on the enzymaticactivity of specific human isoforms of proteins from subfamily AKR1C are presented. Tested ligands include synthetic steroidal compounds, commercial compounds and plant extracts. Steroid compounds, AKR-1, -2, -3, -7, -9, -19 and -22, were found to be good inhibitors of AKR1C3, and further kinetic studies were conducted. Finally, cocrystalization of protein AKR1C3 with cofactor and these inhibitors was accomplished. From 7 different complexes of protein with inhibitors, two structures were solved to very high resolution, AKR-7: 1.7 Å, AKR -19: 1.6 Å. These results represent the first protein crystal structures solved by researchers from Serbia, and results provide an excellent basis for further design and testing of new inhibitors.
- Published
- 2019
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