155 results on '"Reference method"'
Search Results
2. Proof of concept: stabilized whole blood material suitable for external quality assessment of near-patient testing devices
- Author
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Wütherich Jana, Zylla Stephanie, Bissé Emmanuel, Nauck Matthias, and Petersmann Astrid
- Subjects
external quality control ,glucose concentration measurement ,near-patient testing ,patient self-testing ,quality assurance ,reference method ,Medical technology ,R855-855.5 - Abstract
Even though reliable glucose concentration measurements are essential in diagnosis and monitoring of diabetes mellitus, external quality assurance based on mandatory reference method values can only be conducted to a limited extent for measurements in whole blood. The reason is the lack of stabilized whole blood materials suitable for the application in glucose measurement devices used in near-patient testing.
- Published
- 2023
- Full Text
- View/download PDF
3. Surface Hygiene Evaluation Method in Food Trucks as an Important Factor in the Assessment of Microbiological Risks in Mobile Gastronomy.
- Author
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Wiatrowski, Michał, Rosiak, Elżbieta, and Czarniecka-Skubina, Ewa
- Subjects
STREET food ,HYGIENE ,MOBILE food services ,ESCHERICHIA coli ,RISK assessment ,EVALUATION methodology ,GASTRONOMY - Abstract
Street food outlets are characterised by poor microbiological quality of the food and poor hygiene practices that pose a risk to consumer health. The aim of the study was to evaluate the hygiene of surfaces in food trucks (FT) using the reference method together with alternatives such as Petrifilm
TM and the bioluminescence method. TVC, S. aureus, Enterobacteriaceae, E. coli, L. monocytogenes, and Salmonella spp. were assessed. The material for the study consisted of swabs and prints taken from five surfaces (refrigeration, knife, cutting board, serving board, and working board) in 20 food trucks in Poland. In 13 food trucks, the visual assessment of hygiene was very good or good, but in 6 FTs, TVC was found to exceed log 3 CFU/100 cm2 on various surfaces. The assessment of surface hygiene using various methods in the food trucks did not demonstrate the substitutability of culture methods. PetrifilmTM tests were shown to be a convenient and reliable tool for the monitoring of mobile catering hygiene. No correlation was found between the subjective visual method and the measurement of adenosine 5-triphosphate. In order to reduce the risk of food infections caused by bacteria in food trucks, it is important to introduce detailed requirements for the hygiene practices used in food trucks, including techniques for monitoring the cleanliness of surfaces coming into contact with food, in particular cutting boards and work surfaces. Efforts should be focused on introducing mandatory, certified training for food truck personnel in the field of microbiological hazards, appropriate methods of hygienisation, and hygiene monitoring. [ABSTRACT FROM AUTHOR]- Published
- 2023
- Full Text
- View/download PDF
4. Comparison of a human portable blood glucose meter and automated chemistry analyser for measurement of blood glucose concentrations in healthy dogs
- Author
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Sihem Ismail‐Hamdi, Mohamed Néjib Romdane, and Samir Ben Romdhane
- Subjects
capillary blood ,dogs ,glucose measurement ,glycaemia ,human‐use glucometer ,reference method ,Veterinary medicine ,SF600-1100 - Abstract
Abstract Blood glucose measurement is one of the most commonly performed clinical diagnostic tests used to monitor glycaemia in several animal diseases. Usually, these laboratory analyses are performed on blood venous samples in remote laboratories, and the results are delayed, at best. The use of portable glucometers could evidently solve many constraints but veterinary‐use glucometers are not usually available. The present study aimed to compare blood glucose levels obtained by Bionime glucometer to the reference method using glucose oxidase. Venous blood was collected from a total number of 140 healthy dogs (72 males and 68 females), of different breeds (28 German Shepherd, 27 Pitt bull, 21 Boxer, 24 Rottweiler and 40 cross‐bred dogs) and different ages (range: 3 months–14 years) for glucose measurement using the reference laboratory method. Capillary blood samples were used to conduct a glucose measurement with a human‐use glucometer. Our results revealed that there was no significant difference between the mean capillary blood glucose (CBG) measured with the human‐use glucometer (5.06 ± 0.84 mmol/L) and the mean venous blood glucose (VBG) measured with the laboratory reference method (4.90 ± 0.73 mmol/L) (p = 0.42). Similarly, there was no significant difference of the mean CBG and VBG in male dogs (5.11 ± 0.88 and 4.97 ± 0.75 mmol/L, respectively) and female dogs (5.01 ± 0.81 and 5.07 ± 0.72 mmol/L, respectively) (p = 0.73 and 0.21, respectively), and no correlation to neither age (5.43 ± 0.90 and 5.20 ± 0.70 mmol/L in 3 to 6 month‐old dogs, 5.03 ± 0.82 and 4.94 ± 0.79 mmol/L in 6 months to 1 year‐old, 4.94 ± 0.67 and 5.13 ± 0.66 mmol/L in 1 to 4 year‐old dogs; 4.88 ± 0.94 and 4.80 ± 0.75 mmol/L in dogs older than 4 years, respectively, p
- Published
- 2021
- Full Text
- View/download PDF
5. Comparative Study of PM10 Concentrations and Their Elemental Composition Using Two Different Techniques during Winter–Spring Field Observation in Polish Village.
- Author
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Mach, Tomasz, Olszowski, Tomasz, Rogula-Kozłowska, Wioletta, Rybak, Justyna, Bralewska, Karolina, Rogula-Kopiec, Patrycja, Bożym, Marta, Majewski, Grzegorz, Ziembik, Zbigniew, and Kuczuk, Anna
- Subjects
- *
BIOMASS burning , *WEATHER , *X-ray fluorescence , *FACTOR analysis , *AIR quality - Abstract
The aims of this study were to determine the concentrations and elemental composition of PM10 in the village of Kotórz Mały (Poland), to analyse their seasonal variability, to determine the sources of pollutant emissions and to compare the consistency of the results obtained using different methods. Sampling and weather condition measurements were carried out in the winter (January–February) and spring (April) of 2019. Two combinations of different techniques were used to examine PM10 concentrations and their chemical composition: gravimetric method + atomic absorption spectrometry (GM+AAS) and continuous particle monitor + energy dispersive X-ray fluorescence (CPM+EDXRF). In winter, the average concentrations of PM10 measured by the GM and CPM were similar (GM 44.3 µg/m3; CPM 34.0 µg/m3), while in spring they were clearly different (GM 49.5 µg/m3; CPM 29.8 µg/m3). Both AAS and EDXRF proved that in both seasons, Ca, K and Fe had the highest shares in the PM10 mass. In the case of the lowest shares, the indications of the two methods were slightly different. Factor analysis indicated that air quality in the receptor was determined by soil erosion, coal and burning biomass, and the combustion of fuels in car engines; in the spring, air quality was also affected by gardening activities. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
6. Influence of the Testing Procedure on the Value of the Impact Attenuation of Rail Fastening Systems: an Experimental Study.
- Author
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Carrascal, I.A., Casado, J.A., Diego, S., Sainz-Aja, J.A., Ferreño, D., Barrientos, A., and García, D.
- Subjects
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DYNAMIC loads , *MAINTENANCE costs , *FASTENERS - Abstract
Railway superstructure components are subject to impact forces caused by irregularities in the rail and wheel or variations in the support stiffness. These imperfections lead to the premature and accelerated deterioration of the track and increase maintenance costs. Generally, to mitigate these dynamic loads, elastomeric rail pads are interposed between rails and sleepers. For each track section, the pad choice is made according to its stiffness, impact attenuation and cost. In this experimental study, eight types of rail pads were characterized using two procedures from EN 13146–3. The results revealed that the rail pad material and geometry affect the impact attenuation ability of the pad and the testing procedure affect the results. It was found that the preload applied is one of the parameters that most affects the impact attenuation value. Appling a preload of 50 kN during the impact attenuation test, which is suggested by the standard, affected this parameter by ranging from between ~2 and ~ 20, depending on the rail pad. Based on these results it is considered that EN 13146–3 should be updated. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
7. Interlaboratory study of the method for direct determination of volatile compounds in alcoholic products using ethanol as internal standard
- Author
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Siarhei V. Charapitsa, Svetlana N. Sytova, Anton L. Korban, Lidia N. Sobolenko, Vladimir V. Egorov, Siarhei M. Leschev, Radomir Cabala, Murat Yilmaztekin, and Turgut Cabaroglu
- Subjects
internal standard ,reference method ,volatile compounds ,spirit products ,interlaboratory study ,Chemistry ,QD1-999 - Abstract
A collaborative interlaboratory study of the method of direct determination of volatile compounds in spirit drinks and alcoholic products was performed. The proposed method employs ethanol, the major volatile component of an alcoholic product, as an internal standard. For the experiment realization, 9 laboratories from 4 countries – Belarus, Czech Republic, Turkey, Russia – were supplied with standard solutions for gas chromatographic measurements. Five aqueous ethanol 40 % (v/v) standard solutions containing target compounds in concentrations ranging from 10 to 400 mg/L of absolute alcohol were gravimetrically prepared and delivered to the participants. The interlaboratory study was evaluated according to the ISO 5725 standards and the «EuroChem» guide. The repeatability limits (within-laboratory precision) varied between 0.4 and 7.5 % for all samples and compounds, showing a sufficiently high repeatability of the method. The reproducibility limits (between-laboratory precision) were found to vary within a satisfactory range of 0.5–10.0 %. Precision of the method was well within the range predicted by the Horwitz equation for all analytes. In the study experimental estimation of trueness was performed for the first time. Analysis of the obtained results showed that the bias of the method is insignificant at the significance level 5 %. The experimentally determined concentrations of the analytes compared well to the gravimetrical values, thus showing very satisfactory accuracy of the method. The results of the interlaboratory study confirmed that the method «ethanol as internal standard» is robust and reliable and can be used as a standard method for the determination of volatile compounds in water-ethanol samples. Moreover, this method can be validated in any one laboratory without performing additional experimental studies based on the results obtained by validation of the traditional method.
- Published
- 2020
- Full Text
- View/download PDF
8. Surface Hygiene Evaluation Method in Food Trucks as an Important Factor in the Assessment of Microbiological Risks in Mobile Gastronomy
- Author
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Michał Wiatrowski, Elżbieta Rosiak, and Ewa Czarniecka-Skubina
- Subjects
food trucks ,hygiene ,PetrifilmTM ,reference method ,ATP ,TVC ,Chemical technology ,TP1-1185 - Abstract
Street food outlets are characterised by poor microbiological quality of the food and poor hygiene practices that pose a risk to consumer health. The aim of the study was to evaluate the hygiene of surfaces in food trucks (FT) using the reference method together with alternatives such as PetrifilmTM and the bioluminescence method. TVC, S. aureus, Enterobacteriaceae, E. coli, L. monocytogenes, and Salmonella spp. were assessed. The material for the study consisted of swabs and prints taken from five surfaces (refrigeration, knife, cutting board, serving board, and working board) in 20 food trucks in Poland. In 13 food trucks, the visual assessment of hygiene was very good or good, but in 6 FTs, TVC was found to exceed log 3 CFU/100 cm2 on various surfaces. The assessment of surface hygiene using various methods in the food trucks did not demonstrate the substitutability of culture methods. PetrifilmTM tests were shown to be a convenient and reliable tool for the monitoring of mobile catering hygiene. No correlation was found between the subjective visual method and the measurement of adenosine 5-triphosphate. In order to reduce the risk of food infections caused by bacteria in food trucks, it is important to introduce detailed requirements for the hygiene practices used in food trucks, including techniques for monitoring the cleanliness of surfaces coming into contact with food, in particular cutting boards and work surfaces. Efforts should be focused on introducing mandatory, certified training for food truck personnel in the field of microbiological hazards, appropriate methods of hygienisation, and hygiene monitoring.
- Published
- 2023
- Full Text
- View/download PDF
9. Comparison of a human portable blood glucose meter and automated chemistry analyser for measurement of blood glucose concentrations in healthy dogs.
- Author
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Ismail‐Hamdi, Sihem, Romdane, Mohamed Néjib, and Ben Romdhane, Samir
- Subjects
- *
BLOOD sugar , *BLOOD sugar measurement , *FEMALE dogs , *DOGS , *ANIMAL diseases - Abstract
Blood glucose measurement is one of the most commonly performed clinical diagnostic tests used to monitor glycaemia in several animal diseases. Usually, these laboratory analyses are performed on blood venous samples in remote laboratories, and the results are delayed, at best. The use of portable glucometers could evidently solve many constraints but veterinary‐use glucometers are not usually available. The present study aimed to compare blood glucose levels obtained by Bionime glucometer to the reference method using glucose oxidase. Venous blood was collected from a total number of 140 healthy dogs (72 males and 68 females), of different breeds (28 German Shepherd, 27 Pitt bull, 21 Boxer, 24 Rottweiler and 40 cross‐bred dogs) and different ages (range: 3 months–14 years) for glucose measurement using the reference laboratory method. Capillary blood samples were used to conduct a glucose measurement with a human‐use glucometer. Our results revealed that there was no significant difference between the mean capillary blood glucose (CBG) measured with the human‐use glucometer (5.06 ± 0.84 mmol/L) and the mean venous blood glucose (VBG) measured with the laboratory reference method (4.90 ± 0.73 mmol/L) (p = 0.42). Similarly, there was no significant difference of the mean CBG and VBG in male dogs (5.11 ± 0.88 and 4.97 ± 0.75 mmol/L, respectively) and female dogs (5.01 ± 0.81 and 5.07 ± 0.72 mmol/L, respectively) (p = 0.73 and 0.21, respectively), and no correlation to neither age (5.43 ± 0.90 and 5.20 ± 0.70 mmol/L in 3 to 6 month‐old dogs, 5.03 ± 0.82 and 4.94 ± 0.79 mmol/L in 6 months to 1 year‐old, 4.94 ± 0.67 and 5.13 ± 0.66 mmol/L in 1 to 4 year‐old dogs; 4.88 ± 0.94 and 4.80 ± 0.75 mmol/L in dogs older than 4 years, respectively, p < 0.05), nor to breed (4.94 ± 1.01 and 4.99 ± 0.79 mmol/L in German Shepherd, 5.13 ± 0.84 and 4.99 ± 0.79 mmol/L in Pitt Bull, 5.07 ± 0.94 and 5.07 ± 0.77 mmol/L in Boxer, 5.40 ± 0.59 and 5.48 ± 0.55 mmol/L in Rottweiler and 4.89 ± 0.75 and 4.77 ± 0.59 mmol/L in cross‐bred dogs, respectively, p < 0.05). The present study confirms that human glucometer can be used to measure glucose in dogs with a good accuracy. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
10. Comparison of the Japan Society of Clinical Chemistry reference method and CDC method for HDL and LDL cholesterol measurements using fresh sera
- Author
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Yuzo Kayamori, Masakazu Nakamura, Koji Kishi, Takashi Miida, Kunihiro Nishimura, Tomonori Okamura, Satoshi Hirayama, Hirotoshi Ohmura, Hiroshi Yoshida, Masumi Ai, Akira Tanaka, Hiroyuki Sumino, Masami Murakami, Ikuo Inoue, Tamio Teramoto, and Shinji Yokoyama
- Subjects
Reference method ,Cholesterol dehydrogenase ,LDL-cholesterol ,HDL-cholesterol ,Homogeneous assay ,Beta-quantification ,Medicine (General) ,R5-920 ,Chemistry ,QD1-999 - Abstract
Objectives: In 2009, the Japan Society of Clinical Chemistry (JSCC) recommended a reference method for the measurement of serum high-density lipoprotein cholesterol (HDL-C) and low-density lipoprotein cholesterol (LDL-C) levels. This automated method uses cholesterol esterase-cholesterol dehydrogenase to measure cholesterol levels in fractions obtained after ultracentrifugation and dextran sulfate/magnesium chloride precipitation. In the present study, using fresh samples, we compared the LDL-C and HDL-C levels measured using this method with those measured using the traditional Centers for Disease Control and Prevention (CDC)-beta-quantification (BQ) method. Design: and methods: Using both the JSCC and CDC-BQ methods, LDL-C/HDL-C levels were measured in 47 non-diseased and 126 diseased subjects, whose triglyceride levels were lower than 11.29 mmol/L (1000 mg/dL). Results: For LDL-C, the equation of the line representing the correlation between the two methods was y = 0.991x + 0.009 mmol/L; r = 0.999; and Sy/x = 0.025 mmol/L, where x is the mean LDL-C level measured using the CDC-BQ method. Similarly, for HDL-C, the equation of the line representing the correlation between the two methods was y = 0.988x + 0.041 mmol/L, r = 0.999, and Sy/x = 0.019 mmol/L, where x is the mean HDL-C level measured using the CDC-BQ method. Conclusions: The JSCC method agreed with the CDC-BQ method in cases of both non-diseased and diseased subjects, including those with dyslipidemia.
- Published
- 2021
- Full Text
- View/download PDF
11. Comparative Study of PM10 Concentrations and Their Elemental Composition Using Two Different Techniques during Winter–Spring Field Observation in Polish Village
- Author
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Tomasz Mach, Tomasz Olszowski, Wioletta Rogula-Kozłowska, Justyna Rybak, Karolina Bralewska, Patrycja Rogula-Kopiec, Marta Bożym, Grzegorz Majewski, Zbigniew Ziembik, and Anna Kuczuk
- Subjects
continuous particle monitor ,reference method ,PX-365 ,EDXRF ,AAS ,factor analysis ,Technology - Abstract
The aims of this study were to determine the concentrations and elemental composition of PM10 in the village of Kotórz Mały (Poland), to analyse their seasonal variability, to determine the sources of pollutant emissions and to compare the consistency of the results obtained using different methods. Sampling and weather condition measurements were carried out in the winter (January–February) and spring (April) of 2019. Two combinations of different techniques were used to examine PM10 concentrations and their chemical composition: gravimetric method + atomic absorption spectrometry (GM+AAS) and continuous particle monitor + energy dispersive X-ray fluorescence (CPM+EDXRF). In winter, the average concentrations of PM10 measured by the GM and CPM were similar (GM 44.3 µg/m3; CPM 34.0 µg/m3), while in spring they were clearly different (GM 49.5 µg/m3; CPM 29.8 µg/m3). Both AAS and EDXRF proved that in both seasons, Ca, K and Fe had the highest shares in the PM10 mass. In the case of the lowest shares, the indications of the two methods were slightly different. Factor analysis indicated that air quality in the receptor was determined by soil erosion, coal and burning biomass, and the combustion of fuels in car engines; in the spring, air quality was also affected by gardening activities.
- Published
- 2022
- Full Text
- View/download PDF
12. Reference method for off-line analysis of nitrogen oxides in cell culture media by an ozone-based chemiluminescence detector.
- Author
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Chmayssem, Ayman, Monsalve-Grijalba, Karen, Alias, Mélanie, Mourier, Véronique, Vignoud, Séverine, Scomazzon, Loïc, Muller, Céline, Barthes, Julien, Vrana, Nihal Engin, and Mailley, Pascal
- Subjects
- *
NITROGEN analysis , *NITROGEN oxides , *NITRIC oxide , *CHEMILUMINESCENCE , *CELL culture , *VASCULAR endothelial cells - Abstract
Nitric oxide (NO) and its by-products are important biological signals in human physiology and pathology particularly in the vascular and immune systems. Thus, in situ determination of the NO-related molecule (NOx) levels using embedded sensors is of high importance particularly in the context of cellular biocompatibility testing. However, NOx analytical reference method dedicated to the evaluation of biomaterial biocompatibility testing is lacking. Herein, we demonstrate a PAPA-NONOate-based reference method for the calibration of NOx sensors. After, the validation of this reference method and its potentialities were demonstrated for the detection of the oxidative stress-related NO secretion of vascular endothelial cells in a 3D tissue issued from 3D printing. Such NOx detection method can be an integral part of cell response to biomaterials. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
13. Antimicrobial susceptibility testing of Mycobacterium tuberculosis complex isolates – the EUCAST broth microdilution reference method for MIC determination.
- Author
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Schön, Thomas, Werngren, Jim, Machado, Diana, Borroni, Emanuele, Wijkander, Maria, Lina, Gerard, Mouton, Johan, Matuschek, Erika, Kahlmeter, Gunnar, Giske, Christian, Santin, Miguel, Cirillo, Daniela Maria, Viveiros, Miguel, and Cambau, Emmanuelle
- Subjects
- *
MYCOBACTERIUM tuberculosis , *MICROBIAL sensitivity tests , *BACTERIAL colonies , *GLASS beads - Abstract
Several methods are used worldwide for antibiotic susceptibility testing (AST) for the Mycobacterium tuberculosis complex (MTBC). The variability in the results obtained with these methods hampers setting epidemiological cut-off (ECOFF) values and clinical breakpoints according to EUCAST guidelines. Methods for susceptibility testing and determination of the minimal inhibitory concentrations (MICs) need to be standardized for MTBC isolates for old and new agents. Our objective was to establish a standardized reference method for MIC determination for MTBC. The EUCAST antimycobacterial susceptibility testing subcommittee (AMST) compared protocols of MIC determination with regard to medium, inoculum preparation, antituberculous agent preparation, incubation, reading of the results and interpretation. The EUCAST reference method of MIC determination for MTBC is the broth microdilution method in Middlebrook 7H9-10% OADC medium. The final inoculum is a 105 CFU/mL suspension, obtained from a 10−2 dilution of a 0.5 McFarland suspension prepared after vortexing bacterial colonies with glass beads before suspending them in sterile water. The culture is maintained in a U-shaped 96-well polystyrene microtitre sterile plate with a lid incubated at 36° ± 1°C. Reading is done using an inverted mirror as soon as the 1:100 diluted control (i.e. 103 CFU/mL suspension) shows visual growth. The MIC, expressed in mg/L, is the lowest concentration that inhibits visual growth. Mycobacterium tuberculosis H37Rv ATCC 27294 is used as the reference strain and its targeted MIC values are within the range 0.03–0.12 for isoniazid, 0.12–0.5 for levofloxacin and 0.25–1 mg/L for amikacin. The EUCAST reference method for MTBC was endorsed by EUCAST after public consultation and will from now on be used to define EUCAST ECOFFs and clinical breakpoints. This reference method is not primarily intended to be used under routine conditions and the AST methods will need to be calibrated against this reference method to be used with EUCAST breakpoints. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
14. بررسی مقایسهاي آلودگی به کلیفرم و اشرشیاکلی در مواد غذایی با استفاده از محیطهاي کروموژن مختلف و ارزیابی آنها با روش مرجع
- Author
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لیلا سهرابی, علی فضلآرا, and مهدي پورمهدي بروجنی
- Subjects
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QUALITY control , *FOOD supply , *FOOD quality , *AGAR , *FECAL contamination , *STATISTICS , *COLIFORMS - Abstract
Various methods have been developed to detect the presence of contamination with Coliforms and E. coli in foods. The pour plate technique using VRBA medium is confirmed as a standard method in Iran. The biggest disadvantage of thismethod is the need to spend a lot of time, high volume of laboratory operations, multiple stages and ultimately long time to achieve the results. Today, due to the mass productionof various foodstuffs, the need for faster methods with high sensitivity to control the quality of food is necessary for the responsible oversight centers. The use of chromogenic medias is also one of the fastest diagnostic methods that have been developed. According to this matter,a comparative study was considered from the results of application of three chromogenic media and reference method in food quality control. Totally 100 samples of foodstuffs were evaluated for contamination to Coliform and E.coli using standard method and three chromogenic medias. Based on the obtained results, 86, 79, 85 and 80 samples were contaminated to Coliform using the standard method, Coliform Agar ES, ChromAgar ECC and Rapid E.coli 2/Agar respectively. Also, using four mentioned methods, contamination to E.coli was reported at 66, 80, 84 and 80, respectively. Cochrane test showed that there was no significant difference between the four methods in Coliform diagnosis (p>0.05). However, four methods did not have the same function in the detection of E. coli so that the chromogenic methods showed significant difference with the standard method (p< 0/001). But there was no significant difference between these chromogenic methods in detecting E.coli (p>0.05). According to the statistical analysis of present study, three chromogenic medias can be used instead of the standard method for the detection of Coliform, but the use of these chromogenic medias is not recommended for the identification of E.coli. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
15. Quality evaluation of tender jackfruit using near-infrared reflectance spectroscopy.
- Author
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Babu, Pritty S., Sudheer, K. P., Sarathjith, M. C., Mathew, Santhi Mary, and Gopinath, Girish
- Subjects
REFLECTANCE spectroscopy ,NEAR infrared spectroscopy ,JACKFRUIT ,ATTENUATED total reflectance ,NEAR infrared reflectance spectroscopy - Abstract
Value addition of fresh tender jackfruit (Artocarpus heterophyllus L.) for vegetable purpose has gained much popularity due to its inherent nutritional and health benefits. For industries involved in value addition of tender jackfruit, rapid characterization of raw material is essential for screening and routine quality evaluation. But, conventional reference methods of quality evaluation are not suitable as they involve the use of chemicals, expensive, laborious and time consuming subject to the number of samples to be analyzed. As a promising alternative, the present study examined the performance of near-infrared spectroscopy (NIRS) as a novel approach to estimate pH, total soluble solid, titrable acidity, firmness and toughness of tender jackfruit. Partial least square regression (PLSR) models were used to establish linkage between reflectance spectra (1100-2450 nm) and quality attributes of fresh tender jackfruit. Based on residual prediction deviation (RPD) criteria, accuracy of PLSR model of titrable acidity was noted to be excellent (RPD=3.96) while good estimation was possible in case of firmness-tendril (RPD=2.61). Accuracy level suitable for coarse quantitative estimation (RPD=2.12) was noted in case of total soluble solids. The PLSR models of all other attributes were found to be capable of discriminating their low and high values (1.5
- Published
- 2020
- Full Text
- View/download PDF
16. Development and validation of a candidate reference method for serum cortisol by isotope dilution liquid chromatography-tandem mass spectrometry combined with dextran sulfate-Mg2+ precipitation.
- Author
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Zhang, Tianjiao, Zhao, Haijian, Li, Miao, Zeng, Jie, Wang, Jing, Long, Qichen, Wang, Yufei, Zhang, Chuanbao, and Chen, Wenxiang
- Subjects
- *
LIQUID chromatography-mass spectrometry , *DILUTION , *HYDROCORTISONE , *NATALIZUMAB , *PITUITARY gland , *PRECIPITATION (Chemistry) , *HYDROXYPROGESTERONE - Abstract
Accurate and precise cortisol measurements are requisite for ensuring appropriate diagnosis and management of diseases related with adrenal or pituitary gland disorders. Prompted by the needs in characterization of certified reference materials and quality assurance for serum cortisol measurements, we developed and evaluated a highly reliable measurement procedure based on isotope dilution liquid chromatography-tandem mass spectrometry (ID LC-MS/MS) combined with dextran sulfate-Mg2+ precipitation as the sample pretreatment. An appropriate amount of serum was accurately weighed and spiked with the isotope labelled internal standard. After precipitation, massive lipids and lipoproteins were removed from serum matrix. The clear supernatant was transferred and extracted with ethyl acetate-hexane solution. The cortisol was analyzed with LC-MS/MS in positive electrospray ionization mode. The within-run and total coefficient of variations (CVs) ranged from 0.3 to 0.6% and 0.7 to 1.2%, respectively, for a concentration range of 76.30 to 768.04 nmol/L. A regression comparison of the results obtained by the present method and the certified values of ERM-DA451 showed agreement with no statistical difference (Y = 1.0092 X-0.7455; 95% CI for the slope, 0.9940 to 1.0212; 95% CI for the intercept, − 3.6575 to 2.6390, r2 = 0.999). All structural analogs of cortisol tested were well resolved from cortisol in 12 min on a phenyl ligand column under an isocratic elution. The limit of quantification was estimated to 5 pg cortisol in absolute amount. This method is accurate and simple and can be served as a candidate reference measurement procedure in establishment of serum cortisol reference system. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
17. Measurement of serum progesterone by isotope dilution liquid chromatography tandem mass spectrometry: a candidate reference method and its application to evaluating immunoassays.
- Author
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Wang, Yufei, Zhang, Tianjiao, Zhao, Haijian, Zhou, Weiyan, Zeng, Jie, Zhang, Jiangtao, Zhang, Chuanbao, and Chen, Wenxiang
- Subjects
- *
PROGESTERONE , *LIQUID chromatography , *MASS spectrometry , *IMMUNOASSAY , *STANDARD deviations - Abstract
Measurement of serum progesterone is important in determining ovarian function. Most progesterone measurements are performed with immunoassays and results are often variable. Standardization of the measurements requires a reliable reference method. An isotope dilution liquid chromatography tandem mass spectrometry (ID-LC/MS/MS) method for the measurement of serum progesterone was developed. Serum samples were spiked with 13C3-progesterone, extracted with a three-step liquid-liquid extraction, and analyzed by LC/MS/MS. A bracketing calibration was used for the analysis and samples were prepared gravimetrically. The developed method showed intra-run and total relative standard deviations (RSDs) of 0.50~0.58% and 0.71~1.33%, respectively. The analytical recoveries were 99.08~101.50%. Measurement results on certified reference materials obtained with this method agreed with the certified values within the stated measurement uncertainties. The method was applied to evaluate immunoassays through split-sample comparisons. A panel of 48 fresh frozen individual samples were measured with the ID-LC/MS/MS method, and six immunoassays and results were compared. Significant calibration biases and sample-specific deviations were observed on some of the immunoassays. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
18. Quantification of Element Mass Concentrations in Ambient Aerosols by Combination of Cascade Impactor Sampling and Mobile Total Reflection X-ray Fluorescence Spectroscopy
- Author
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Stefan Seeger, Janos Osan, Ottó Czömpöly, Armin Gross, Hagen Stosnach, Luca Stabile, Maria Ochsenkuehn-Petropoulou, Lamprini Areti Tsakanika, Theopisti Lymperopoulou, Sharon Goddard, Markus Fiebig, Francois Gaie-Levrel, Yves Kayser, and Burkhard Beckhoff
- Subjects
TXRF ,reference method ,cascade impactor ,ambient aerosols ,particles ,air quality monitoring ,Meteorology. Climatology ,QC851-999 - Abstract
Quantitative chemical analysis of airborne particulate matter (PM) is vital for the understanding of health effects in indoor and outdoor environments, as well as for enforcing EU air quality regulations. Typically, airborne particles are sampled over long time periods on filters, followed by lab-based analysis, e.g., with inductively coupled plasma mass spectrometry (ICP-MS). During the EURAMET EMPIR AEROMET project, cascade impactor aerosol sampling is combined for the first time with on-site total reflection X-ray fluorescence (TXRF) spectroscopy to develop a tool for quantifying particle element compositions within short time intervals and even on-site. This makes variations of aerosol chemistry observable with time resolution only a few hours and with good size resolution in the PM10 range. The study investigates the proof of principles of this methodological approach. Acrylic discs and silicon wafers are shown to be suitable impactor carriers with sufficiently smooth and clean surfaces, and a non-destructive elemental mass concentration measurement with a lower limit of detection around 10 pg/m3 could be achieved. We demonstrate the traceability of field TXRF measurements to a radiometrically calibrated TXRF reference, and the results from both analytical methods correspond satisfactorily.
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- 2021
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19. Measurement of human serum unconjugated estriol without derivatization using liquid chromatography-tandem mass spectrometry candidate reference method and compared with two immunoassays.
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Huang, Xianzhang, Zhang, Qiaoxuan, Zheng, Songbai, Wang, Jianbing, Han, Liqiao, Lin, Haibiao, Ke, Peifeng, Zhuang, Junhua, and Cao, Zhimin (Tim)
- Subjects
- *
LIQUID chromatography-mass spectrometry , *IMMUNOASSAY , *ESTRIOL , *CHROMATOGRAMS , *ION exchange chromatography - Abstract
A candidate reference measurement procedure (RMP) for measurement of unconjugated estriol in human serum has been developed and validated. The proposed method is highly reliable and uses isotope dilution coupled with liquid chromatography-tandem mass spectrometry (ID-LC-MS/MS) and requires no derivatization. An appropriate amount of serum was accurately weighed and spiked with an isotopically labeled internal standard. Unconjugated estriol and its internal standard were extracted from serum matrix using liquid-liquid extraction prior to reversed-phase LC-MS/MS. Calibrator bracketing was used to give higher specificity and accuracy for assigning serum level. The accuracy of the candidate RMP was validated by split-sample comparison to established RMPs. The lowest limit of detection (LLoD) and lowest limit of quantification (LLoQ) for developed RMP was estimated to be 0.14 nmol/L and 0.35 nmol/L, respectively. Both intra- and inter-assay imprecisions were ≤2.19% at 1.39, 17.34 and 69.35 nmol/L, respectively. Recoveries were 98.54% to 100.34% and linear response ranged from 0.35 to 173.38 nmol/L. No interference was observed. Biases were 5.6% and 2.8% against the targets of RELA2015A (3.87 nmol/L) and RELA2015B (40.62 nmol/L), respectively. Moreover, the candidate RMP was successfully applied to measure level of unconjugated estriol in serum samples of pregnant women (n = 3) and compared with two immunoassays in clinical laboratory. Our developed method is simple, accurate, and can be used as a candidate RMP to determine total unconjugated estriol level in human serum. Further improvement of certain immunoassays in accuracy and precision is needed.Selected ion chromatograms by LC-MS/MS using a C18 column for uE3 from a serum sample
[ABSTRACT FROM AUTHOR]
- Published
- 2018
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20. A Comparison of Result Reliability for Investigation of Milk Composition by Alternative Analytical Methods in Czech Republic
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Oto Hanuš, Jan Říha, Eva Samková, David Ledvina, Gustav Chládek, Josef Kučera, Petr Roubal, Radoslava Jedelská, and Jaroslav Kopecký
- Subjects
cow raw milk ,milk composition ,reference method ,indirect method ,adjustation ,analytical result reliability ,Agriculture ,Biology (General) ,QH301-705.5 - Abstract
The milk analyse result reliability is important for assurance of foodstuff chain quality. There are more direct and indirect methods for milk composition measurement (fat (F), protein (P), lactose (L) and solids non fat (SNF) content). The goal was to evaluate some reference and routine milk analytical procedures on result basis. The direct reference analyses were: F, fat content (Röse–Gottlieb method); P, crude protein content (Kjeldahl method); L, lactose (monohydrate, polarimetric method); SNF, solids non fat (gravimetric method). F, P, L and SNF were determined also by various indirect methods: – MIR (infrared (IR) technology with optical filters), 7 instruments in 4 labs; – MIR–FT (IR spectroscopy with Fourier’s transformations), 10 in 6; – ultrasonic method (UM), 3 in 1; – analysis by the blue and red box (BRB), 1 v 1. There were used 10 reference milk samples. Coefficient of determination (R2), correlation coefficient (r) and standard deviation of the mean of individual differences (MDsd, for n) were evaluated. All correlations (r; for all indirect and alternative methods and all milk components) were significant (P ≤ 0.001). MIR and MIR–FT (conventional) methods explained considerably higher proportion of the variability in reference results than the UM and BRB methods (alternative). All r average values (x minus 1.64 × sd for 95% confidence interval) can be used as standards for calibration quality evaluation (MIR, MIR–FT, UM and BRB): – for F 0.997, 0.997, 0.99 and 0.995; – for P 0.986, 0.981, 0.828 and 0.864; – for L 0.968, 0.871, 0.705 and 0.761; – for SNF 0.992, 0.993, 0.911 and 0.872. Similarly MDsd (x plus 1.64 × sd): – for F 0.071, 0.068, 0.132 and 0.101%; – for P 0.051, 0.054, 0.202 and 0.14%; – for L 0.037, 0.074, 0.113 and 0.11%; – for SNF 0.052, 0.068, 0.141 and 0.204.
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- 2014
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21. Harmonization of blood-based indicators of iron status: making the hard work matter.
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Hoofnagle, Andrew N.
- Subjects
IRON in the blood ,BIOINDICATORS ,BLOOD serum analysis ,FERRITIN ,RESEARCH bias ,IRON deficiency ,CLINICAL pathology ,IRON deficiency anemia ,PREVENTION ,BLOOD testing ,ANEMIA ,BIOMARKERS ,IRON - Abstract
Blood-based indicators that are used in the assessment of iron status are assumed to be accurate. In practice, inaccuracies in these measurements exist and stem from bias and variability. For example, the analytic variability of serum ferritin measurements across laboratories is very high (≥15%), which increases the rate of misclassification in clinical and epidemiologic studies. The procedures that are used in laboratory medicine to minimize bias and variability could be used effectively in clinical research studies, particularly in the evaluation of iron deficiency and its associated anemia in pregnancy and early childhood and in characterizing states of iron repletion and excess. The harmonization and standardization of traditional and novel bioindicators of iron status will allow results from clinical studies to be more meaningfully translated into clinical practice by providing a firm foundation for clinical laboratories to set appropriate cutoffs. In addition, proficiency testing monitors the performance of the methods over time. It is important that measures of iron status be evaluated, validated, and performed in a manner that is consistent with standard procedures in laboratory medicine. [ABSTRACT FROM AUTHOR]
- Published
- 2017
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22. Comparison of potential higher order reference methods for total haemoglobin quantification-an interlaboratory study.
- Author
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Frank, Claudia, Brauckmann, Christine, Palos, Marie, Arsene, Cristian, Neukammer, Joerg, Castillo Busto, Maria, Zakel, Sabine, Swart, Claudia, Güttler, Bernd, and Stosch, Rainer
- Subjects
- *
HEMOGLOBINS , *CLINICAL medicine , *MOLAR mass , *INDUCTIVELY coupled plasma mass spectrometry , *LEAST squares , *ERYTHROCYTES - Abstract
The total haemoglobin (Hb) concentration in blood is one of the most frequently measured analytes in clinical medicine because of its significance for evaluating the health state of a human. The spectrophotometric cyanmethaemoglobin (HiCN) method is the internationally accepted conventional reference method to determine this biomarker. It is frequently used in clinical routine diagnostics but is not traceable to the International System of Units and thus does not meet highest metrological demands. A further critical issue is the toxicity of the necessary potassium cyanide. Different methods to solve these problems are reported here. They all were validated against the HiCN method in an interlaboratory comparison by measuring the total Hb concentration present in the certified reference material JCCRM 912-2M. Methods considered were the spectrophotometric alkaline haematin detergent (AHD) method as well as several isotope dilution (ID)-based approaches. The latter include inductively coupled plasma mass spectrometry (ICP-MS), species-specific (SS) ICP-MS, organic MS and Raman spectrometry. [ABSTRACT FROM AUTHOR]
- Published
- 2017
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23. Ion Chromatography Applications in Wastewater Analysis
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Rajmund Michalski
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ion chromatography ,wastewater ,anions ,cations ,reference method ,Physics ,QC1-999 ,Chemistry ,QD1-999 - Abstract
Wastewater analysis is an important area in analytical and environmental chemistry. It can be performed with both the classic wet methods and instrumental techniques. The development of new methods, and modification of the existing ones, constitute a major task for researchers. Ion chromatography plays a predominant role in ion determinations with the instrumental methods. It offers several advantages over the conventional methods, such as simultaneous determinations of alkali and alkaline earth cations and ammonia. Ammonium ions cannot be determined by spectroscopic methods. Ion chromatography has been accepted world-wide as a reference method for analyzing anions and cations in water and wastewater due to the fact that it enables the replacement of several individual wet chemistry methods for common ions with one instrumental technique. The following article describes the principles of ion chromatography, such as stationary phases, eluents, detectors, and sample preparation methods. Moreover, the applications of ion chromatography in wastewater analyses and international standards are presented.
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- 2018
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24. Analysis of calibration results for casein determination via indirect method of infrared spectroscopy
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Oto Hanuš, Tao Yong, Josef Kučera, Václava Genčurová, Kristýna Hanušová, Tomáš Kopec, Jaroslav Kopecký, and Radoslava Jedelská
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cow ,raw milk ,sample ,reference method ,infrared spectroscopy ,nitrogen ,Agriculture ,Biology (General) ,QH301-705.5 - Abstract
Casein measurement is important for cheesemaking and control of dairy cow nutrition. Reference Kjeldahl method is not suitable for routine purposes. Infra-red spectroscopy MIR and MIR-FT use can be a solutin. However, their casein specifity is relatively limited. Aim of the work was to assess the quality of performed calibrations for validation of calibration parameters. A retrospective analysis of MIR and MIR-FT calibrations was performed for estimation of limits their suitable parameters. Mean casein values of reference sample sets varied from 2.49 to 2.7% (2.61 ± 0.155). Mean variation range was 0.561 ± 0.164%. The mean correlation coefficient of calibration (KKK) was 0.974 ± 0.018 (P < 0.001). The mean standard deviation of mean for individual differences (SDID) was 0.03 ± 0.011% (from 0.01 to 0.08). MIR-FT results were slightly better both for calibration and for proficiency testing. The high and low KKKs were higher in the case of accepted calibration as in proficiency testing for MIR-FT and MIR (0.986 > 0.964 and 0.970 > 0.948; 0.982 > 0.947 and 0.947 > 0.911; P < 0.001). The casein number varied from 79.4 to 80.56% in bulk milk samples in three years, its variability was low from 1.4 to 1.5% relatively, which shows on relatively reliable casein analyses by methods MIR and MIR-FT. It does not need to agree fuly for individual milk samples. It is linked more to MIR than MIR-FT. Limits for acceptable calibration parameters were derived: > 0.945 for KKK; 0.048 for SDID and 0.029% for mean difference as maximum.
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- 2010
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25. Interpretation of EQA results and EQA-based trouble shooting.
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Berge Kristensen, Gunn Berit and Meijer, Piet
- Subjects
- *
QUALITY control , *CLINICAL pathology , *PLATELET function tests , *HEMATOLOGY , *MEDICAL care - Abstract
Important objectives of External Quality Assessment (EQA) is to detect analytical errors and make corrective actions. The aim of this paper is to describe knowledge required to interpret EQA results and present a structured approach on how to handle deviating EQA results. The value of EQA and how the EQA result should be interpreted depends on five key points: the control material, the target value, the number of replicates, the acceptance limits and between lot variations in reagents used in measurement procedures. This will also affect the process of finding the sources of errors when they appear. The ideal EQA sample has two important properties: it behaves as a native patient sample in all methods (is commutable) and has a target value established with a reference method. If either of these two criteria is not entirely fulfilled, results not related to the performance of the laboratory may arise. To help and guide the laboratories in handling a deviating EQA result, the Norwegian Clinical Chemistry EQA Program (NKK) has developed a flowchart with additional comments that could be used by the laboratories e.g. in their quality system, to document action against deviations in EQA. This EQA-based trouble-shooting tool has been developed further in cooperation with the External quality Control for Assays and Tests (ECAT) Foundation. This flowchart will become available in a public domain, i.e. the website of the European organisation for External Quality Assurance Providers in Laboratory Medicine (EQALM). [ABSTRACT FROM AUTHOR]
- Published
- 2017
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26. Waste hazard properties HP 4 ‘Irritant’ and HP 8 ‘Corrosive’ by pH, acid/base buffer capacity and acid/base concentration
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Pierre Hennebert and Institut National de l'Environnement Industriel et des Risques (INERIS)
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chemistry.chemical_classification ,0303 health sciences ,Environmental Engineering ,Base (chemistry) ,Chemistry ,H314 ,Carbonation ,H318 ,Hazard property ,010501 environmental sciences ,H315 ,Pulp and paper industry ,01 natural sciences ,Neutralization ,H319 ,Reference method ,03 medical and health sciences ,Hazardous waste ,[SDE]Environmental Sciences ,Environmental Chemistry ,CLP ,Waste Management and Disposal ,Product ,030304 developmental biology ,0105 earth and related environmental sciences - Abstract
International audience; European “Technical Recommendations” have proposed, with the use of substance concentrations, the use of a pH (≤2 or ≥11.5) to classify waste for the hazard properties HP4 ‘Irritant’ and HP8 ‘Corrosive’. The document add unfortunately that the buffer capacity must be “not low” to classify as hazardous. Buffer capacity refers to a 2018 UK classification guide referring to the ‘corrosive’ level of a method proposed in 1988 for substances and preparations but not retained in EU regulations, but well in its Guidance. The product method uses the pH unclearly associated or not to a 1% concentration. The different methods of classifying products and wastes in terms of corrosivity or irritation are expressed as acid/base concentration and compared. The “corrosive” level of 1988 corresponds to an average strong acid/base concentration ≥14.4%, i.e. 14 times less severe than CLP (acid/base concentration ≥0.44-0.15% for pH only or ≥1% for pH and concentration). The “pH only” method corresponds to the lowest concentration of acid/base and is the most severe. These methods were applied to five hazardous alkaline wastes (pH ≥11.5). The “pH only” method is the only that classifies all waste in accordance with the European List of Waste. To avoid innovation and divergence between products and waste, it seems preferable to use the product regulations “pH only” or eventually “pH and concentration” for HP4 and HP8. Fortunately, the elimination of the danger HP 4 and HP 8 from acidic or alkaline waste can be obtained by neutralization, including for alkaline wastes with CO2.
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- 2021
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27. Multicentre testing of the EUCAST broth microdilution reference method for MIC determination on Mycobacterium tuberculosis
- Author
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Schön, Thomas, Werngren, Jim, Machado, Diana, Borroni, Emanuele, Wijkander, Maria, Lina, Gerard, Mouton, Johan, Matuschek, Erika, Kahlmeter, Gunnar, Giske, Christian, Santin, Miguel, Cirillo, Daniela Maria, Viveiros, Miguel, Cambau, Emmanuelle, Schön, Thomas, Werngren, Jim, Machado, Diana, Borroni, Emanuele, Wijkander, Maria, Lina, Gerard, Mouton, Johan, Matuschek, Erika, Kahlmeter, Gunnar, Giske, Christian, Santin, Miguel, Cirillo, Daniela Maria, Viveiros, Miguel, and Cambau, Emmanuelle
- Abstract
OBJECTIVES: The first objective of the European Committee on Antimicrobial Susceptibility Testing (EUCAST) subcommittee for antimycobacterial susceptibility testing (AMST), launched in 2016, was to set a reference method for determining the MICs of antituberculous agents, since many protocols are used worldwide and a consensus one is needed for the determination of microbiological breakpoints. METHODS: During 2017 and 2018, MIC determination protocols were evaluated prospectively in a multicentre study within the four AMST laboratories. MIC results were obtained for isoniazid, levofloxacin and amikacin on the reference strain Mycobacterium tuberculosis H37Rv ATCC 27294. Broth microdilution (BMD) in Middlebrook 7H9 and solid medium dilution (SMD) in Middlebrook 7H10 were performed using two inoculum concentrations. MICs were interpreted with regard to visual and 99% inhibition after 7, 14 or 21 days of incubation for BMD and 21 days for SMD. RESULTS: Following the EUCAST reference protocol, intra- and inter-assay agreements were within ±1 MIC dilution for >95% of the observations for the three drugs in both methods. MIC values, presented as MIC mode (range) for BMD and SMD respectively, were: 0.03 (0.015-0.06) mg/L and 0.12 (0.06-0.25) mg/L for isoniazid, 0.25 mg/L (0.25-0.5) and 0.5 mg/L (0.12-0.5) for levofloxacin, and 0.5 mg/L (0.5-1.0) and 0.5 mg/L (0.5-1.0) for amikacin. CONCLUSIONS: Both SMD and BMD were reproducible and eligible as a reference method for MIC determination of the Mycobacterium tuberculosis complex (MTBC). BMD was finally selected as the EUCAST reference method. From now on it will be used to set epidemiological cut-off values and clinical breakpoints of new and old antituberculous agents., Finding: ESCMID
- Published
- 2021
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28. A neural network with adversarial loss for light field synthesis from a single image
- Author
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Evain, S., Guillemot, C., Evain, S., and Guillemot, C.
- Abstract
This paper describes a lightweight neural network architecture with an adversarial loss for generating a full light field from one single image. The method is able to estimate disparity maps and automatically identify occluded regions from one single image thanks to a disparity confidence map based on forward-backward consistency checks. The disparity confidence map also controls the use of an adversarial loss for occlusion handling. The approach outperforms reference methods when trained and tested on light field data. Besides, we also designed the method so that it can efficiently generate a full light field from one single image, even when trained only on stereo data. This allows us to generalize our approach for view synthesis to more diverse data and semantics. Copyright © 2021 by SCITEPRESS – Science and Technology Publications, Lda. All rights reserved.
- Published
- 2021
29. Development of a multiple regression model to calibrate a low-cost sensor considering reference measurements and meteorological parameters
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Romero, Yovitza, Velásquez, Ricardo Manuel Arias, and Noel, Julien
- Published
- 2020
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30. Non-structural carbohydrates in woody plants compared among laboratories.
- Author
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Quentin, Audrey G., Pinkard, Elizabeth A., Ryan, Michael G., Tissue, David T., Baggett, L. Scott, Adams, Henry D., Maillard, Pascale, Marchand, Jacqueline, Landhäusser, Simon M., Lacointe, André, Gibon, Yves, Anderegg, William R. L., Asao, Shinichi, Atkin, Owen K., Bonhomme, Marc, Claye, Caroline, Chow, Pak S., Clément-Vidal, Anne, Davies, Noel W., and Dickman, L. Turin
- Subjects
- *
WOODY plants , *CARBOHYDRATES , *PLANT cells & tissue physiology , *EUCALYPTUS globulus , *EXTRACTION (Chemistry) - Abstract
Non-structural carbohydrates (NSC) in plant tissue are frequently quantified to make inferences about plant responses to environmental conditions. Laboratories publishing estimates of NSC of woody plants use many different methods to evaluate NSC. We asked whether NSC estimates in the recent literature could be quantitatively compared among studies. We also asked whether any differences among laboratories were related to the extraction and quantification methods used to determine starch and sugar concentrations. These questions were addressed by sending sub-samples collected from five woody plant tissues, which varied in NSC content and chemical composition, to 29 laboratories. Each laboratory analyzed the samples with their laboratory-specific protocols, based on recent publications, to determine concentrations of soluble sugars, starch and their sum, total NSC. Laboratory estimates differed substantially for all samples. For example, estimates for Eucalyptus globulus leaves (EGL) varied from 23 to 116 (mean = 56) mg g-1 for soluble sugars, 6-533 (mean = 94) mg g-1 for starch and 53-649 (mean = 153) mg g-1 for total NSC. Mixed model analysis of variance showed that much of the variability among laboratories was unrelated to the categories we used for extraction and quantification methods (method category R² = 0.05-0.12 for soluble sugars, 0.10-0.33 for starch and 0.01-0.09 for total NSC). For EGL, the difference between the highest and lowest least squares means for categories in the mixed model analysis was 33 mg g-1 for total NSC, compared with the range of laboratory estimates of 596 mg g-1. Laboratories were reasonably consistent in their ranks of estimates among tissues for starch (r = 0.41-0.91), but less so for total NSC (r = 0.45-0.84) and soluble sugars (r = 0.11-0.83). Our results show that NSC estimates for woody plant tissues cannot be compared among laboratories. The relative changes in NSC between treatments measured within a laboratory may be comparable within and between laboratories, especially for starch. To obtain comparable NSC estimates, we suggest that users can either adopt the reference method given in this publication, or report estimates for a portion of samples using the reference method, and report estimates for a standard reference material. Researchers interested in NSC estimates should work to identify and adopt standard methods. [ABSTRACT FROM AUTHOR]
- Published
- 2015
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31. A candidate reference measurement procedure for quantifying serum concentrations of 25-hydroxyvitamin D and 25-hydroxyvitamin D using isotope-dilution liquid chromatography-tandem mass spectrometry.
- Author
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Mineva, Ekaterina, Schleicher, Rosemary, Chaudhary-Webb, Madhulika, Maw, Khin, Botelho, Julianne, Vesper, Hubert, and Pfeiffer, Christine
- Subjects
- *
VITAMIN D , *MUSCLE strength , *SERUM , *CHROMATOGRAPHIC analysis , *DIETARY supplements - Abstract
The inaccuracy of routine serum 25-hydroxyvitamin D measurements hampers the interpretation of data in patient care and public health research. We developed and validated a candidate reference measurement procedure (RMP) for highly accurate quantitation of two clinically important 25-hydroxyvitamin D metabolites in serum, 25-hydroxyvitamin D [25(OH)D] and 25-hydroxyvitamin D [25(OH)D]. The two compounds of interest together with spiked deuterium-labeled internal standards [ d-25(OH)D and d-25(OH)D] were extracted from serum via liquid-liquid extraction. The featured isotope-dilution LC-MS/MS method used reversed-phase chromatography and atmospheric pressure chemical ionization in positive ion mode. A pentafluorophenylpropyl-packed UHPLC column together with isocratic elution allowed for complete baseline resolution of 25(OH)D and 25(OH)D from their structural C-3 isomers within 12 min. We evaluated method trueness, precision, potential interferences, matrix effects, limits of quantitation, and measurement uncertainty. Calibration materials were, or were traceable to, NIST Standard Reference Materials 2972. Within-day and total imprecision (CV) averaged 1.9 and 2.0 % for 25(OH)D, respectively, and 2.4 and 3.5 % for 25(OH)D, respectively. Mean trueness was 100.3 % for 25(OH)D and 25(OH)D. The limits of quantitation/limits of detection were 4.61/1.38 nmol/L for 25(OH)D and 1.46/0.13 nmol/L for 25(OH)D. When we compared our RMP results to an established RMP using 40 serum samples, we found a nonsignificant mean bias of 0.2 % for total 25(OH)D. This candidate RMP for 25(OH)D metabolites meets predefined method performance specifications (≤5 % total CV and ≤1.7 % bias) and provides sufficient sample throughput to meet the needs of the Centers for Disease Control and Prevention Vitamin D Standardization Certification Program. [Figure not available: see fulltext.] [ABSTRACT FROM AUTHOR]
- Published
- 2015
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32. Quantification of Element Mass Concentrations in Ambient Aerosols by Combination of Cascade Impactor Sampling and Mobile Total Reflection X-ray Fluorescence Spectroscopy
- Author
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Lamprini Areti Tsakanika, Yves Kayser, Luca Stabile, François Gaie-Levrel, Sharon Goddard, Burkhard Beckhoff, Stefan Seeger, János Osán, Armin Gross, Ottó Czömpöly, Markus Fiebig, Maria Ochsenkuehn-Petropoulou, Hagen Stosnach, and Theopisti Lymperopoulou
- Subjects
Atmospheric Science ,010504 meteorology & atmospheric sciences ,Resolution (mass spectrometry) ,Analytical chemistry ,Environmental Science (miscellaneous) ,ambient aerosols ,lcsh:QC851-999 ,01 natural sciences ,Size resolved chemical composition ,Time resolved chemical composition ,Mass concentration (chemistry) ,ICP-MS ,Spectroscopy ,Inductively coupled plasma mass spectrometry ,0105 earth and related environmental sciences ,Detection limit ,particles ,Total internal reflection ,010401 analytical chemistry ,Air quality monitoring ,Ambient aerosols ,Cascade impactor ,Element mass concentration ,Particles ,Reference method ,TXRF ,air quality monitoring ,0104 chemical sciences ,Aerosol ,reference method ,Particle ,lcsh:Meteorology. Climatology ,cascade impactor - Abstract
Quantitative chemical analysis of airborne particulate matter (PM) is vital for the understanding of health effects in indoor and outdoor environments, as well as for enforcing EU air quality regulations. Typically, airborne particles are sampled over long time periods on filters, followed by lab-based analysis, e.g., with inductively coupled plasma mass spectrometry (ICP-MS). During the EURAMET EMPIR AEROMET project, cascade impactor aerosol sampling is combined for the first time with on-site total reflection X-ray fluorescence (TXRF) spectroscopy to develop a tool for quantifying particle element compositions within short time intervals and even on-site. This makes variations of aerosol chemistry observable with time resolution only a few hours and with good size resolution in the PM10 range. The study investigates the proof of principles of this methodological approach. Acrylic discs and silicon wafers are shown to be suitable impactor carriers with sufficiently smooth and clean surfaces, and a non-destructive elemental mass concentration measurement with a lower limit of detection around 10 pg/m3 could be achieved. We demonstrate the traceability of field TXRF measurements to a radiometrically calibrated TXRF reference, and the results from both analytical methods correspond satisfactorily.
- Published
- 2021
33. Comparability of four clinical laboratory measurement methods for GGT and commutability of candidate reference materials
- Author
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Rui Zhang and Qingtao Wang
- Subjects
0301 basic medicine ,Microbiology (medical) ,gamma‐glutamyl transferase ,medicine.medical_specialty ,Clinical Biochemistry ,Metrological traceability ,Linear analysis ,03 medical and health sciences ,0302 clinical medicine ,External quality assessment ,Humans ,Immunology and Allergy ,Medicine ,comparability ,Medical physics ,Research Articles ,commutability ,Measurement method ,business.industry ,Biochemistry (medical) ,Comparability ,Public Health, Environmental and Occupational Health ,gamma-Glutamyltransferase ,Hematology ,Reference Standards ,Serum samples ,Internal quality ,Medical Laboratory Technology ,030104 developmental biology ,reference method ,030220 oncology & carcinogenesis ,Fresh frozen ,business ,Blood Chemical Analysis ,Research Article - Abstract
Background This study was conducted to evaluate the progress in the standardization of the gamma‐glutamyl transferase (GGT) to achieve metrological traceability of routine in vitro diagnosis (IVD) medical devices. Methods We collected 25 single fresh frozen serum samples for GGT analysis. Candidate reference materials (RMs), calibrators, internal quality controls (IQC), and external quality assessment (EQA) materials from the National Center for Clinical Laboratory (NCCL), Beijing Center for Clinical Laboratory (BCCL), and College of American Pathologists (CAP) were randomly added to these serum samples. A total of 42 samples were examined using IFCC reference method and four different IVD medical devices to perform the comparability and commutability study. Results The four IVD medical devices achieved trueness assessment within the measurement range. Linear analysis showed the agreement of Siemens ADVIA 2400, Hitachi 7600‐020/BioSino, Beckman AU 5800, and Roche Cobas 501 with the reference method. These assay pairs were comparable at the medical decision levels. The GGT in‐house candidate RMs, and Beckmann and Roche calibrators were all within the limits of the 95% prediction intervals, the commutability of BioSino calibrators was indeterminate, and some internal and external quality controls were not commutable for comparisons of certain IVD medical devices vs the reference method. Conclusions By comparing with the reference method, we found that performance of GGT conventional measurement systems to be traceable to the higher order references was improved. The commutable materials for calibration and trueness controls of routine methods were significant to promote the standardization of GGT analysis., Commutability of reference materials for GGT between IFCC reference method and IVD medical devices (A‐D). The solid lines are the regression lines, and dashed lines are the limits of the 95% prediction intervals. Cross represents NCCL, BCCL, and CAP external quality assessment substances, asterisk represents internal quality control products, diamond represents calibrators, and triangle represents homemade candidate reference materials.
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- 2020
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34. Primerjava sistemov umerjanja inštrumentov za določanje števila somatskih celic v mleku
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Jančigaj, Gašper and Rogelj, Irena
- Subjects
mleko ,milk ,umeritvena enačba ,fluoro-opto-elektronic method ,referenčna metoda ,somatic cell count ,koeficient variacije ,referenčna vrednost ,reference value ,udc:637.1:542.089.6:57.086 ,fluoro-opto-elektronska metoda ,število somatskih celic ,coefficient of variation ,calibration equation ,reference method ,calibration of instruments ,umerjanje inštrumentov - Published
- 2020
35. Determinación de caudales ecológicos en el río Cutuchi, Ecuador
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Ilbay Yupa, Mercy, Albarrasín, Paola, and García, Víctor M.
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Reference method ,Caudales ecológicos ,Río Cutuchi ,Tennant ,Ecological flows ,General Earth and Planetary Sciences ,método Referencial ,General Environmental Science ,Cutuchi River - Abstract
RESUMEN La legislación del Ecuador obliga a mantener un caudal ecológico para preservar los ecosistemas y la biodiversidad. Sin embargo, son pocos los ríos en el país en los que se ha establecido el flujo mínimo. El objetivo de esta investigación fue determinar el caudal ecológico en el río Cutuchi, estación hidrológica Cutuchi A.J. Yanayacu (H792), mediante los métodos: Caudal de permanencia, Suizo, Tennant, Rafael Heras y Referencial. Adicionalmente, se comparó con el caudal ecológico al 10% del caudal medio mensual multianual establecido en la transitoria sexta de la ley ecuatoriana. También se analizó las tendencias del caudal y la precipitación en la cuenca alta del río Patate. Los resultados evidencian un caudal promedio anual de 9,64 m3/s para el río Cutuchi, con dos regímenes hidrológicos (avenidas y estiaje) que respondes a la distribución de las precipitaciones. La comparación de medias según la prueba de Tukey al 5%, determinó a los métodos Referenciales seguidos de Tennant, como adecuados para la sobrevivencia de la vida acuática en el río. De igual manera, los caudales estimados fueron superiores al caudal mínimo observado para el periodo 1990-2014. El análisis de tendencia mediante la prueba estadística de Mann-Kendall evidenció que el caudal anual y estacional presentaron cambios o tendencias significativas (p Abstract Ecuador's legislation requires maintaining an ecological flow to preserve ecosystems and biodiversity. However, few rivers in the country where the minimum flow has been established. The objective of this research was to determine the ecological flow in the Cutuchi River, Cutuchi A.J. Yanayacu hydrological station (H792), using the methods: Permanence Flow, Swiss, Tennant, Rafael Heras and Referential. In addition, it was compared with the ecological flow to 10% of the average monthly multi-year flow established in the transitional sixth of Ecuadorian law. Flow and precipitation trends in the upper Patate River basin were also analyzed. The results show an average annual flow of 9.64 m3/s for the Cutuchi River, with two hydrological regimes (avenues and styling) that respond to the distribution of precipitation. The comparison of means according to the Tukey test at 5%, determined the Referential methods followed by Tennant, as suitable for the survival of aquatic life in the river. Similarly, the estimated flow rates were higher than the minimum flow observed for the period 1990-2014. Trend analysis using Mann-Kendall's statistical test showed that annual and seasonal flow showed significant changes or trends (p
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- 2020
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36. A candidate reference method and multiple commutable control materials for serum 25-hydroxyvitamin D measurement.
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Zhang L, Long Q, Zhang J, Zeng Q, Zhao H, Chen W, Zhang T, and Zhang C
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- Humans, Chromatography, Liquid methods, Calcifediol, Vitamin D, Reference Standards, Tandem Mass Spectrometry methods, 25-Hydroxyvitamin D 2
- Abstract
Objectives: The aim of the current study was to establish a reliable candidate reference method for serum 25-hydroxyvitamin D [25(OH)D] measurement and to assess the commutability of multiple control materials among liquid chromatography-tandem mass spectrometry (LC-MS/MS) methods., Methods: Serum 25-hydroxyvitamin D2 [25(OH)D2] and 25-hydroxyvitamin D3 [25(OH)D3] together with spiked internal standards were extracted with a one-step approach and then analyzed by LC-MS/MS. The commutability assessment for 25(OH)D was conducted according to the Clinical and Laboratory Standards Institute (CLSI) EP14-A3 protocol. 25(OH)D concentrations in 5 levels of unprocessed serum pools, 7 levels of serum pools spiked with 25(OH)D3 or 25(OH)D2, 3 levels of commercial control materials, 2 levels of spiked bovine serum, and 4 levels of external quality assessment (EQA) materials were measured along with 30 single-donor samples using the candidate reference method and two routine LC-MS/MS methods., Results: The candidate reference method could separate 25(OH)D2 and 25(OH)D3 from 14 potential interfering compounds completely within a 9-min analysis time. Good method precision was obtained, and measurement results on certified reference material NIST SRM 972a were within the uncertainty of the certified values. All candidate materials were assessed commutable for LC-MS/MS methods., Conclusions: The candidate reference method for serum 25(OH)D measurement is precise, accurate, and robust against interferences and can provide an accuracy base for routine methods. The multiple alternative control materials with commutability among LC-MS/MS methods will facilitate the further standardization for serum 25(OH)D measurement., (© 2022 The Authors. Journal of Clinical Laboratory Analysis published by Wiley Periodicals LLC.)
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- 2022
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37. Reference method for the development of domain action recognition classifiers: The case of medical consultations
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Molenaar, Sabine, Schiphorst, Laura, Doyran, Metehan, Salah, Albert Ali, Dalpiaz, Fabiano, Brinkkemper, Sjaak, Molenaar, Sabine, Schiphorst, Laura, Doyran, Metehan, Salah, Albert Ali, Dalpiaz, Fabiano, and Brinkkemper, Sjaak
- Abstract
Advances in human action recognition and interaction recognition enable the reliable execution of action classification tasks through machine learning algorithms. However, no systematic approach for developing such classifiers exists and since actions vary between domains, appropriate and usable datasets are uncommon. In this paper, we propose a reference method that assists non-experts in building classifiers for domain action recognition. To demonstrate feasibility, we instantiate it in a case study in the medical domain that concerns the recognition of basic actions of general practitioners. The developed classifier is effective, as it shows a prediction accuracy of 75.6% for the medical action classification task and of more than 90% for three related classification tasks. The study shows that the method can be applied to a specific activity context and that the resulting classifier has an acceptable prediction accuracy. In the future, fine-tuning of the method parameters will endorse the applicability to other domains.
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- 2020
38. Inter- and intra-rater reliability of the OCRA checklist method in video-recorded manual work tasks
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Rhén, I. -M, Forsman, Mikael, Rhén, I. -M, and Forsman, Mikael
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Observation-based risk assessments are often used for evaluation of biomechanical workload and the condition of the workplace ergonomics. However, the inter- and intra-rater reliability of the methods used for the assessments are insufficiently studied. The OCRA checklist method, included as a reference method in the ISO and CEN standards regarding upper limb repetitive risk assessment, was in this study investigated regarding its reliability. Eleven ergonomists were educated within the method. Each ergonomist risk-assessed ten video-recorded manual work tasks, on two occasions. The average inter-rater agreement of the five overall risk levels was 39% and the linearly weighted kappa was 0.43, the intra-rater dittos were 45% and 0.52. Both indicating a moderate reliability, but lower than what could be expected. The levels might be sufficient for coarse surveys. However, for risk assessments before and after an intervention, complementing technical methods should be considered., QC 20200401
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- 2020
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39. Antimicrobial susceptibility testing of Mycobacterium tuberculosis complex isolates – the EUCAST broth microdilution reference method for MIC determination
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Schön, T. (Thomas), Werngren, J. (Jim), Machado, D. (Diana), Borroni, E. (Emanuele), Wijkander, M. (Maria), Lina, G. (Gérard), Mouton, J.W. (Johan), Matuschek, E. (Erika), Kahlmeter, G., Giske, C.G. (Christian G.), Santin, M. (Miguel), Cirillo, D.M. (Daniela Maria), Viveiros, M. (Miguel), Cambau, E. (Emmanuelle), Schön, T. (Thomas), Werngren, J. (Jim), Machado, D. (Diana), Borroni, E. (Emanuele), Wijkander, M. (Maria), Lina, G. (Gérard), Mouton, J.W. (Johan), Matuschek, E. (Erika), Kahlmeter, G., Giske, C.G. (Christian G.), Santin, M. (Miguel), Cirillo, D.M. (Daniela Maria), Viveiros, M. (Miguel), and Cambau, E. (Emmanuelle)
- Abstract
Scope: Several methods are used worldwide for antibiotic susceptibility testing (AST) for the Mycobacterium tuberculosis complex (MTBC). The variability in the results obtained with these methods hampers setting epidemiological cut-off (ECOFF) values and clinical breakpoints according to EUCAST guidelines. Methods for susceptibility testing and determination of the minimal inhibitory concentrations (MICs) need to be standardized for MTBC isolates for old and new agents. Our objective was to establish a standardized reference method for MIC determination for MTBC. Methods: The EUCAST antimycobacterial susceptibility testing subcommittee (AMST) compared protocols of MIC determination with regard to medium, inoculum preparation, antituberculous agent preparation, incubation, reading of the results and interpretation. Recommendations: The EUCAST reference method of MIC determination for MTBC is the broth microdilution method in Middlebrook 7H9-10% OADC medium. The final inoculum is a 105 CFU/mL suspension, obtained from a 10−2 dilution of a 0.5 McFarland suspension prepared after vortexing bacterial colonies with glass beads before suspending them in sterile water. The culture is maintained in a U-shaped 96-well polystyrene microtitre sterile plate with a lid incubated at 36° ± 1°C. Reading is done using an inverted mirror as soon as the 1:100 diluted control (i.e. 103 CFU/mL suspension) shows visual growth. The MIC, expressed in mg/L, is the lowest concentration that inhibits visual growth. Mycobacterium tuberculosis H37Rv ATCC 27294 is used as the reference strain and its targeted MIC values are within the range 0.03–0.12 for isoniazid, 0.12–0.5 for levofloxacin and 0.25–1 mg/L for amikacin. Conclusions: The EUCAST reference method for MTBC was endorsed by EUCAST after public consultation and will from now on be used to define EUCAST ECOFFs and clinical breakpoints. This reference method is not primarily intended to be used under routine conditions and the AST methods
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- 2020
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40. Investigating the effects of smoothness of interfaces on stability of probing nano-scale thin films by neutron reflectometry.
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Jahromi, S. S. and Masoudi, S. F.
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SURFACE roughness , *NANOSTRUCTURED materials , *STABILITY (Mechanics) , *THIN films , *NEUTRON reflectometry , *SCHRODINGER equation , *LIGHT scattering - Abstract
Most of the reflectometry methods which are used for determining the phase of complex reflection coefficient such as reference method and Variation of Surroundings medium are based on solving the Schrödinger equation using a discontinuous and step-like scattering optical potential. However, during the deposition process for making a real sample the two adjacent layers are mixed together and the interface would not be discontinuous and sharp. The smearing of adjacent layers at the interface (smoothness of interface), would affect the reflectivity, phase of reflection coefficient and reconstruction of the scattering length density (SLD) of the sample. In this paper, we have investigated the stability of reference method in the presence of smooth interfaces. The smoothness of interfaces is considered by using a continuous function scattering potential. We have also proposed a method to achieve the most reliable output result while retrieving the SLD of the sample. [ABSTRACT FROM AUTHOR]
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- 2012
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41. Determination of serum cortisol using isotope dilution-liquid chromatography-mass spectrometry as a candidate reference method.
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Jung, Pyong, Kim, Byungjoo, Park, Sang-Ryoul, So, Hun-Young, Shi, Lian, and Kim, Yongseong
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SERUM , *HYDROCORTISONE , *ISOTOPES , *LIQUID chromatography , *MASS spectrometry , *IMMUNOASSAY - Abstract
We propose isotope-dilution mass spectrometry as a candidate reference method for determination of serum cortisol. The method uses liquid chromatography-mass spectrometry (LC-MS), interfaced with electrospray ionization, and selective monitoring of the [M+H]+ ions of cortisol and isotopically labeled cortisol. The isotope-dilution-liquid chromatography-mass spectrometry (ID-LC-MS) method simplifies sample-preparation, because samples are processed by simple solvent extraction without further clean-up and derivatization. We studied the time required for complete equilibration of endogenous cortisol and labeled cortisol spiked into serum and found it to be less than 1 h. The repeatability and the reproducibility of the method were evaluated and found to be 0.55% of the measurement value. CRM 192 and 193 from the Bureau Communautaire de Reference were analyzed for verification of the method. The results obtained from the ID-LC-MS method agreed with the certified values. The relative uncertainty of measurement results for samples in the range of a few tens of micrograms per kilogram to several hundred micrograms per kilogram was evaluated and found to be 0.56%. Immunoassay carried out by three independent clinical laboratories produced results more than 15% higher than this ID-LC-MS method, suggesting the presence of bias in the immunoassay methods. [ABSTRACT FROM AUTHOR]
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- 2004
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42. Improving robustness and accuracy of predicted daily methane emissions of dairy cows using milk mid‐infrared spectra
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Cécile Martin, Matthiew Bell, Eric Froidmont, Amélie Vanlierde, Hélène Soyeurt, Nicolas Gengler, Michael Kreuzer, Björn Kuhla, Sinead McParland, Frédéric Dehareng, Peter Lund, Walloon Agricultural Research Centre, Department Terra & AgroBioChem, Gembloux Agro‐Bio Tech, Université de Liège, Teagasc - The Agriculture and Food Development Authority (Teagasc), Swiss Federal Insitute of Aquatic Science and Technology [Dübendorf] (EAWAG), University of Nottingham, UK (UON), Aarhus University [Aarhus], Unité Mixte de Recherche sur les Herbivores - UMR 1213 (UMRH), VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS)-AgroSup Dijon - Institut National Supérieur des Sciences Agronomiques, de l'Alimentation et de l'Environnement-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Leibniz Institute for Farm Animal Biology (FBN), Dpt. AgroBioChem & Terra, Bayer SA NV, and European Union (EU)238562GplusE 613689OptiMIR (INTERREG IVB North-West Europe) European project COST Methagene (COST-Horizon 2020) European project optiKuh project - German Federal Ministry of Food and Agriculture (BMBL) through the Federal Office for Agriculture and Food (BLE) French National Research Agency (ANR)ANR-13-JFAC-0003-01Danish Milk Levy Fund Aarhus University
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Methane emissions ,Spectrophotometry, Infrared ,030309 nutrition & dietetics ,phenotype ,Mid infrared ,Ice calving ,03 medical and health sciences ,0404 agricultural biotechnology ,Pregnancy ,Statistics ,Animals ,Lactation ,[CHIM]Chemical Sciences ,Mathematics ,0303 health sciences ,milk ,Nutrition and Dietetics ,methane ,Regression analysis ,04 agricultural and veterinary sciences ,040401 food science ,Breed ,Standard error ,Test day ,13. Climate action ,reference method ,dairy ,Cattle ,Female ,Agronomy and Crop Science ,Predictive modelling ,MIR spectra ,Food Science ,Biotechnology - Abstract
International audience; BACKGROUND A robust proxy for estimating methane (CH4) emissions of individual dairy cows would be valuable especially for selective breeding. This study aimed to improve the robustness and accuracy of prediction models that estimate daily CH4 emissions from milk Fourier transform mid-infrared (FT-MIR) spectra by (i) increasing the reference dataset and (ii) adjusting for routinely recorded phenotypic information. Prediction equations for CH4 were developed using a combined dataset including daily CH4 measurements (n = 1089; g d(-1)) collected using the SF6 tracer technique (n = 513) and measurements using respiration chambers (RC, n = 576). Furthermore, in addition to the milk FT-MIR spectra, the variables of milk yield (MY) on the test day, parity (P) and breed (B) of cows were included in the regression analysis as explanatory variables.RESULTS Models developed based on a combined RC and SF6 dataset predicted the expected pattern in CH4 values (in g d(-1)) during a lactation cycle, namely an increase during the first weeks after calving followed by a gradual decrease until the end of lactation. The model including MY, P and B information provided the best prediction results (cross-validation statistics: R-2 = 0.68 and standard error = 57 g CH4 d(-1)).CONCLUSIONS The models developed accounted for more of the observed variability in CH4 emissions than previously developed models and thus were considered more robust. This approach is suitable for large-scale studies (e.g. animal genetic evaluation) where robustness is paramount for accurate predictions across a range of animal conditions. (c) 2020 Society of Chemical Industry
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- 2020
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43. Comparison of the Japan Society of Clinical Chemistry reference method and CDC method for HDL and LDL cholesterol measurements using fresh sera
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Tamio Teramoto, Hiroshi Yoshida, Shinji Yokoyama, Yuzo Kayamori, Akira Tanaka, Takashi Miida, Ikuo Inoue, Koji Kishi, Satoshi Hirayama, Masami Murakami, Kunihiro Nishimura, Masumi Ai, Hiroyuki Sumino, Hirotoshi Ohmura, Tomonori Okamura, and Masakazu Nakamura
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Medicine (General) ,SRM, Standard Reference Material ,Clinical Biochemistry ,NIST, National Institute of Standards and Technology ,HDL-C, high-density lipoprotein-cholesterol ,Reference method ,chemistry.chemical_compound ,R5-920 ,AK, Abell-Kendall ,Full Length Article ,medicine ,LDL-cholesterol ,LDL-C, low-density lipoprotein-cholesterol ,apo, apolipoprotein ,QD1-999 ,Homogeneous assay ,BFr-C, bottom fraction-cholesterol ,CDC, Centers for Disease Control and Prevention ,BQ, beta-quantification ,Syx, standard deviation of the regression line ,Lipoprotein cholesterol ,Ldl cholesterol ,CD, cholesterol dehydrogenase ,Chromatography ,CHE, cholesterol esterase ,Radiological and Ultrasound Technology ,Triglyceride ,Cholesterol ,Cholesterol dehydrogenase ,TG, triglycerides ,Beta-quantification ,medicine.disease ,Disease control ,HDL-cholesterol ,LB, Liebermann-Burchard ,TC, total cholesterol ,Chemistry ,EDTA·2Na, ethylenediamine-N,N′,N′,N′-tetraacetic acid, disodium salt, dihydrate ,Dextran sulfate ,chemistry ,DM, n-dodecyl-β-maltopyranoside ,lipids (amino acids, peptides, and proteins) ,EDDA, ethylenediamine-N,N′-diacetic acid ,Dyslipidemia ,HEPES, 2-[4-(2-hydroxyethyl)-1-piperazinyl] ethanesulfonic acid ,Automated method - Abstract
Objectives In 2009, the Japan Society of Clinical Chemistry (JSCC) recommended a reference method for the measurement of serum high-density lipoprotein cholesterol (HDL-C) and low-density lipoprotein cholesterol (LDL-C) levels. This automated method uses cholesterol esterase-cholesterol dehydrogenase to measure cholesterol levels in fractions obtained after ultracentrifugation and dextran sulfate/magnesium chloride precipitation. In the present study, using fresh samples, we compared the LDL-C and HDL-C levels measured using this method with those measured using the traditional Centers for Disease Control and Prevention (CDC)-beta-quantification (BQ) method. Design and methods: Using both the JSCC and CDC-BQ methods, LDL-C/HDL-C levels were measured in 47 non-diseased and 126 diseased subjects, whose triglyceride levels were lower than 11.29 mmol/L (1000 mg/dL). Results For LDL-C, the equation of the line representing the correlation between the two methods was y = 0.991x + 0.009 mmol/L; r = 0.999; and Sy/x = 0.025 mmol/L, where x is the mean LDL-C level measured using the CDC-BQ method. Similarly, for HDL-C, the equation of the line representing the correlation between the two methods was y = 0.988x + 0.041 mmol/L, r = 0.999, and Sy/x = 0.019 mmol/L, where x is the mean HDL-C level measured using the CDC-BQ method. Conclusions The JSCC method agreed with the CDC-BQ method in cases of both non-diseased and diseased subjects, including those with dyslipidemia., Highlights • Using both the JSCC and BQ methods, LDL-C/HDL-C levels were measured. • The JSCC method agrees with the BQ method. • The JSCC reference method is an accurate, simple, and automatable method. • The JSCC method is suitable for quantitative analysis of LDL-C and HDL-C levels.
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- 2021
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44. Comment on "Do We Need the Replacement of YSI 2300? A View from the Clinical Laboratory" by Spanou and Makris.
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Freckmann G, Baumstark A, Hinzmann R, Haug C, and Pleus S
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- Blood Glucose, Humans, Blood Glucose Self-Monitoring, Laboratories, Clinical
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- 2022
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45. Multicentre testing of the EUCAST broth microdilution reference method for MIC determination on Mycobacterium tuberculosis
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Miguel Viveiros, Johan W. Mouton, Emmanuelle Cambau, Jim Werngren, Emanuele Borroni, Thomas B. Schön, Christian G. Giske, Diana Machado, Daniela Maria Cirillo, Miguel Santin, Gerard Lina, Maria Wijkander, Erika Matuschek, Gunnar Kahlmeter, TB, HIV and opportunistic diseases and pathogens (THOP), Global Health and Tropical Medicine (GHTM), Instituto de Higiene e Medicina Tropical (IHMT), and Medical Microbiology & Infectious Diseases
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0301 basic medicine ,Microbiology (medical) ,medicine.medical_specialty ,Infectious Medicine ,Isoniazida ,Tuberculosis ,medicine.drug_class ,Tuberculosi ,030106 microbiology ,Antitubercular Agents ,Infektionsmedicin ,Levofloxacin ,Microbial Sensitivity Tests ,Antimycobacterial ,Mycobacterium tuberculosis ,Reference method ,03 medical and health sciences ,0302 clinical medicine ,SDG 3 - Good Health and Well-being ,Internal medicine ,medicine ,Isoniazid ,Humans ,030212 general & internal medicine ,EUCAST ,MIC ,Amikacin ,Bacteriological Techniques ,biology ,business.industry ,Broth microdilution ,Mycobacteria ,Reproducibility of Results ,General Medicine ,Micobacteris ,medicine.disease ,biology.organism_classification ,Infectious Diseases ,Mycobacterium tuberculosis complex ,SDG 9 - Industry, Innovation, and Infrastructure ,business ,medicine.drug - Abstract
Objectives: The first objective of the European Committee on Antimicrobial Susceptibility Testing (EUCAST) subcommittee for antimycobacterial susceptibility testing (AMST), launched in 2016, was to set a reference method for determining the MICs of antituberculous agents, since many protocols are used worldwide and a consensus one is needed for the determination of microbiological breakpoints. Methods: During 2017 and 2018, MIC determination protocols were evaluated prospectively in a multicentre study within the four AMST laboratories. MIC results were obtained for isoniazid, levofloxacin and amikacin on the reference strain Mycobacterium tuberculosis H37Rv ATCC 27294. Broth microdilution (BMD) in Middlebrook 7H9 and solid medium dilution (SMD) in Middlebrook 7H10 were performed using two inoculum concentrations. MICs were interpreted with regard to visual and 99% inhibition after 7, 14 or 21 days of incubation for BMD and 21 days for SMD. Results: Following the EUCAST reference protocol, intra- and inter-assay agreements were within ±1 MIC dilution for >95% of the observations for the three drugs in both methods. MIC values, presented as MIC mode (range) for BMD and SMD respectively, were: 0.03 (0.015–0.06) mg/L and 0.12 (0.06–0.25) mg/L for isoniazid, 0.25 mg/L (0.25–0.5) and 0.5 mg/L (0.12–0.5) for levofloxacin, and 0.5 mg/L (0.5–1.0) and 0.5 mg/L (0.5–1.0) for amikacin. Conclusions: Both SMD and BMD were reproducible and eligible as a reference method for MIC determination of the Mycobacterium tuberculosis complex (MTBC). BMD was finally selected as the EUCAST reference method. From now on it will be used to set epidemiological cut-off values and clinical breakpoints of new and old antituberculous agents. publishersversion published
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- 2021
46. Detection and Quantification of Allergens in Foods and Minimum Eliciting Doses in Food-Allergic Individuals (ThRAll)
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Karine Adel-Patient, Anne-Catherine Huet, Rosa Pilolli, Nathalie Gillard, Chiara Nitride, Collette Larré, Olivier Tranquet, Hervé Bernard, Marc De Loose, Linda Monaci, Christof Van Pouke, E. N. Clare Mills, Adel-Patient, Karine, University of Manchester [Manchester], Service de Pharmacologie et d'Immunoanalyse (SPI), Institut National de la Recherche Agronomique (INRA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris-Saclay, Research Institute for Agricultural, Fisheries and Food (ILVO), CER Groupe, Unité de recherche sur les Biopolymères, Interactions Assemblages (BIA), Institut National de la Recherche Agronomique (INRA), Institute of Sciences of Food Production (ISPA), Consiglio Nazionale delle Ricerche (CNR), Clare Mills, E. N., Adel-Patient, K., Bernard, H., De Loose, M., Gillard, N., Huet, A. -C., Larre, C., Nitride, C., Pilolli, R., Tranquet, O., Pouke, C. V., Monaci, L., Service de Pharmacologie et Immunoanalyse (SPI), Médicaments et Technologies pour la Santé (MTS), Université Paris-Saclay-Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Université Paris-Saclay-Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), and National Research Council of Italy | Consiglio Nazionale delle Ricerche (CNR)
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food industry ,ThRAll ,Food industry ,[SDV]Life Sciences [q-bio] ,Dose-Response Relationship, Immunologic ,Food Contamination ,01 natural sciences ,Analytical Chemistry ,food allergens ,0404 agricultural biotechnology ,[SDV.IDA]Life Sciences [q-bio]/Food engineering ,Environmental Chemistry ,Animals ,Humans ,Nuts ,[SPI.GPROC]Engineering Sciences [physics]/Chemical and Process Engineering ,Food allergens ,Chocolate ,ThRAll project ,mass spectrometry ,2. Zero hunger ,Pharmacology ,Food protein ,business.industry ,010401 analytical chemistry ,digestive, oral, and skin physiology ,peptide markers ,analytical method ,04 agricultural and veterinary sciences ,Allergens ,Plants ,040401 food science ,3. Good health ,0104 chemical sciences ,Biotechnology ,Milk ,reference method ,Data quality ,Food processing ,Fast Foods ,allergens ,food-allergic consumers ,business ,Agronomy and Crop Science ,Food Hypersensitivity ,food allergen ,Food Science - Abstract
International audience; Risk-based approaches to managing allergens in foods are being developed by the food industry and regulatory authorities to support food-allergic consumers to avoid ingestion of their problem food, especially in relation to the traces of unintended allergens. The application of such approaches requires access to good quality data from clinical studies to support identification of levels of allergens in foods that are generally safe for most food-allergic consumers as well as analytical tools that are able to quantify allergenic food protein. The ThRAll project aims to support the application of risk-based approaches to food-allergen management in two ways. First, a harmonized quantitative MS-based prototype reference method will be developed for the detection of multiple food allergens in standardized incurred food matrices. This will be undertaken for cow’s milk, hen’s egg, peanut, soybean, hazelnut, and almond incurred into two highly processed food matrices, chocolate and broth powder. This activity is complemented by a second objective to support the development and curation of data on oral food challenges, which are used to define thresholds and minimum eliciting doses. This will be achieved through the development of common protocols for collection and curation of data that will be applied to allergenic foods for which there are currently data gaps.
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- 2019
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47. Investigating the effects of smoothness of interfaces on stability of probing nano-scale thin films by neutron reflectometry
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S.S. Jahromi and S.F. Masoudi
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neutron reflectometry ,thin films ,smooth potential ,reference method ,Physics ,QC1-999 - Abstract
Most of the reflectometry methods which are used for determining the phase of complex reflection coefficient such as Reference Method and Variation of Surroundings medium are based on solving the Schrödinger equation using a discontinuous and step-like scattering optical potential. However, during the deposition process for making a real sample the two adjacent layers are mixed together and the interface would not be discontinuous and sharp. The smearing of adjacent layers at the interface (smoothness of interface), would affect the the reflectivity, phase of reflection coefficient and reconstruction of the scattering length density (SLD) of the sample. In this paper, we have investigated the stability of Reference Method in the presence of smooth interfaces. The smoothness of interfaces is considered by using a continuous function scattering potential. We have also proposed a method to achieve the most reliable output result while retrieving the SLD of the sample.
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- 2012
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48. Reference methods and their wider applicability to measurements of roundness profiles.
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Adamczak, S. and Janecki, D.
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Copyright of e & i Elektrotechnik und Informationstechnik is the property of Springer Nature and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
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- 1998
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49. Evaluation of the commercial AD fosfomycin test for susceptibility testing of multidrug-resistant Enterobacterales and Pseudomonas aeruginosa.
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Parisio, Eva Maria, Camarlinghi, Giulio, Coppi, Marco, Niccolai, Claudia, Antonelli, Alberto, Nardone, Maria, Vettori, Chiara, Giani, Tommaso, Mattei, Romano, and Rossolini, Gian Maria
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FOSFOMYCIN , *PSEUDOMONAS aeruginosa , *ERROR rates , *ENTEROBACTERIACEAE , *ADVERTISING , *INTERNATIONAL organization , *AGAR - Abstract
To compare fosfomycin susceptibility testing with the commercial agar dilution (AD) test, AD Fosfomycin (Liofilchem, Roseto degli Abruzzi, Italy) and the reference AD method, using a collection of multidrug-resistant (MDR) Enterobacterales and Pseudomonas aeruginosa clinical isolates. The collection included 119 carbapenemase-producing Enterobacterales , 53 Enterobacterales producing acquired AmpC-type and/or extended-spectrum β-lactamases and 38 carbapenemase-producing P. aeruginosa , including representatives of different high-risk clones. AD Fosfomycin and AD reference method (ISO 20776-1:2019) were performed starting from the same microbial suspension. Results were interpreted according to EUCAST clinical breakpoints (10.0). Essential agreement (EA), category agreement (CA) and error rates were calculated as described by the International Organization for Standardization. Of 172 Enterobacterales, 143 (83.1%, including 92.9% (52 of 56) of the NDM-producers and 84.2% (48 of 57) of the KPC-producers) were susceptible to fosfomycin using reference AD. A CA of 91.9% (158 of 172; 95% CI 87.1%–95.3%) and an EA of 92.5% (136 of 147; 95% CI 87.4%–96.0%), respectively, were calculated for the commercial AD Fosfomycin test, with 9.8% (14 of 143) of major errors and no very major errors (0 of 29). Overall, 86.8% (33 of 38) of P. aeruginosa showed a fosfomycin MIC ≤128 mg/L using reference AD. An EA of 84.8% (95% CI 66.3%–92.0%) was calculated for the commercial AD Fosfomycin test, with a CA of 100% (95% CI 93.6%–100%) when considering a tentative breakpoint at 128 mg/L. AD Fosfomycin showed an overall good concordance compared with reference AD. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
50. Quantification of Element Mass Concentrations in Ambient Aerosols by Combination of Cascade Impactor Sampling and Mobile Total Reflection X-ray Fluorescence Spectroscopy.
- Author
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Seeger, Stefan, Osan, Janos, Czömpöly, Ottó, Gross, Armin, Stosnach, Hagen, Stabile, Luca, Ochsenkuehn-Petropoulou, Maria, Tsakanika, Lamprini Areti, Lymperopoulou, Theopisti, Goddard, Sharon, Fiebig, Markus, Gaie-Levrel, Francois, Kayser, Yves, and Beckhoff, Burkhard
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X-ray fluorescence , *MICROBIOLOGICAL aerosols , *X-ray reflection , *INDUCTIVELY coupled plasma mass spectrometry , *X-ray spectroscopy , *FLUORESCENCE spectroscopy , *AEROSOLS - Abstract
Quantitative chemical analysis of airborne particulate matter (PM) is vital for the understanding of health effects in indoor and outdoor environments, as well as for enforcing EU air quality regulations. Typically, airborne particles are sampled over long time periods on filters, followed by lab-based analysis, e.g., with inductively coupled plasma mass spectrometry (ICP-MS). During the EURAMET EMPIR AEROMET project, cascade impactor aerosol sampling is combined for the first time with on-site total reflection X-ray fluorescence (TXRF) spectroscopy to develop a tool for quantifying particle element compositions within short time intervals and even on-site. This makes variations of aerosol chemistry observable with time resolution only a few hours and with good size resolution in the PM10 range. The study investigates the proof of principles of this methodological approach. Acrylic discs and silicon wafers are shown to be suitable impactor carriers with sufficiently smooth and clean surfaces, and a non-destructive elemental mass concentration measurement with a lower limit of detection around 10 pg/m3 could be achieved. We demonstrate the traceability of field TXRF measurements to a radiometrically calibrated TXRF reference, and the results from both analytical methods correspond satisfactorily. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
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