10 results on '"Runzhe Yang"'
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2. Quantum and quasi-classical effects in the strong field ionization and subsequent excitation of nitrogen molecules
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Liang Xu, Qi Lu, Vladimir T. Tikhonchuk, Bin Zhou, Runzhe Yang, Qingqing Liang, Feng He, Rostyslav Danylo, Aurélien Houard, André Mysyrowicz, Yi Liu, Shanghai Key Lab of Modern Optical System, University of Shanghai for Science and Technology, Centre d'Etudes Lasers Intenses et Applications (CELIA), Université de Bordeaux (UB)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Centre National de la Recherche Scientifique (CNRS), ELI Beamlines Center, Institute of Physics (ELI ), Key Laboratory for Laser Plasmas (MOE), CAS Center for Excellence in Ultra-Intense Laser Science, Interaction Laser-Matière (ILM), Laboratoire d'optique appliquée (LOA), École Nationale Supérieure de Techniques Avancées (ENSTA Paris)-École polytechnique (X)-Centre National de la Recherche Scientifique (CNRS)-École Nationale Supérieure de Techniques Avancées (ENSTA Paris)-École polytechnique (X)-Centre National de la Recherche Scientifique (CNRS), National Natural Science Foundation of China (12204308, 12034013, 11904232, 11925405, 91850203), Shanghai Municipal Education Commission (22ZR1444100), and Innovation Program of Shanghai Municipal EducationCommission (2017-01-07-00-07-E00007)
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[PHYS.PHYS.PHYS-OPTICS]Physics [physics]/Physics [physics]/Optics [physics.optics] ,Nonlinear optics ,Lasing effect ,Laser filamentation ,Atomic and Molecular Physics, and Optics ,Plasma physics - Abstract
The processes leading to the N2+ lasing are rather complex and even the population distribution after the pump laser excitation is unknown. In this paper, we study the population distribution at electronic and vibrational levels in N2+ driven by ultra-short laser pulse at the wavelengths of 800 nm and 400 nm by using the quantum-mechanical time-domain incoherent superposition model based on the time-dependent Schrödinger equation and the quasi-classical model assuming instantaneous ionization injection described by density matrix. It is shown that while both models provide qualitatively similar results, the quasi-classical instantaneous ionization injection model underestimates the population inversions corresponding to the optical transitions at 391 nm, 423 nm and 428 nm due to the assumption of quantum mixed states at the ionization time. A fast and accurate correction to this error is proposed. This work solidifies the theoretical models for population at vibrational states in N2+ and paves the way to uncover the mechanism of the N2+ lasing.
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- 2022
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3. Functional connectomics spanning multiple areas of mouse visual cortex
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Russel Torres, Kai Kuehner, Wenjing Yin, Saumil S. Patel, Chris Xu, Emmanouil Froudarakis, Grace Williams, Amy L. R. Sterling, Nicholas L. Turner, Daniel J. Bumbarger, Anthony Ramos, Andreas S. Tolias, Zheng H Tan, Fei Ye, J. Alexander Bae, Brendan Celii, Szi-chieh Yu, Runzhe Yang, Jingpeng Wu, Oluwaseun Ogedengbe, Merlin Moore, Gayathri Mahalingam, Kyle Willie, Xaq Pitkow, Sarah Williams, Christos Papadopoulos, Sven Dorkenwald, Daniel Kapner, Sam Kinn, Ran Lu, Dimitri Yatsenko, Leila Elabbady, Fabian H. Sinz, Selden Koolman, Agnes L. Bodor, Ben Silverman, Nico Kemnitz, Chris S. Jordan, Sergiy Popovych, Elanine Miranda, Cameron Smith, Akhilesh Halageri, Paul G. Fahey, Tianyu Wang, William Silversmith, Sarah McReynolds, Ryan Willie, Eric Mitchell, Jacob Reimer, JoAnn Buchanan, Edgar Y. Walker, Barak Nehoran, Thomas Macrina, Zhen Jia, H. Sebastian Seung, William Wong, Stelios Papadopoulos, James Hebditch, Derrick Brittain, Casey M Schneider-Mizell, Nuno Maçarico da Costa, Manuel Castro, Forrest Collman, R. Clay Reid, Shanka Subhra Mondal, Marc Takeno, Kai Li, Tim P. Fliss, Jay Gager, Taliah Muhammad, Shang Mu, Clare Gamlin, Shelby Suckow, Erick Cobos, Mahaly Baptiste, and Kisuk Lee
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Connectomics ,Calcium imaging ,medicine.anatomical_structure ,Visual cortex ,Neocortex ,nervous system ,Excitatory postsynaptic potential ,medicine ,Neuron ,Axon ,Biology ,Inhibitory postsynaptic potential ,Neuroscience - Abstract
To understand the brain we must relate neurons’ functional responses to the circuit architecture that shapes them. Here, we present a large functional connectomics dataset with dense calcium imaging of a millimeter scale volume. We recorded activity from approximately 75,000 neurons in primary visual cortex (VISp) and three higher visual areas (VISrl, VISal and VISlm) in an awake mouse viewing natural movies and synthetic stimuli. The functional data were co-registered with a volumetric electron microscopy (EM) reconstruction containing more than 200,000 cells and 0.5 billion synapses. Subsequent proofreading of a subset of neurons in this volume yielded reconstructions that include complete dendritic trees as well the local and inter-areal axonal projections that map up to thousands of cell-to-cell connections per neuron. Here, we release this dataset as an open-access resource to the scientific community including a set of tools that facilitate data retrieval and downstream analysis. In accompanying papers we describe our findings using the dataset to provide a comprehensive structural characterization of cortical cell types1–3and the most detailed synaptic level connectivity diagram of a cortical column to date2, uncovering unique cell-type specific inhibitory motifs that can be linked to gene expression data4. Functionally, we identify new computational principles of how information is integrated across visual space5, characterize novel types of neuronal invariances6and bring structure and function together to decipher a general principle that wires excitatory neurons within and across areas7, 8.
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- 2021
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4. Predicting modular functions and neural coding of behavior from a synaptic wiring diagram
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Chris S. Jordan, Alex Sood, H. Sebastian Seung, Jingpeng Wu, Doug Bland, Kisuk Lee, Celia David, Dodam Ih, Nico Kemnitz, Alexandro D. Ramirez, Emre Aksay, William Silversmith, Ignacio Tartavull, Runzhe Yang, Mark S. Goldman, Ashwin Vishwanathan, and Nicholas L. Turner
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Connectomics ,Synaptic weight ,Calcium imaging ,Artificial neural network ,business.industry ,Computer science ,Connectome ,Wiring diagram ,Modular design ,business ,Neural coding ,Neuroscience - Abstract
How much can connectomes with synaptic resolution help us understand brain function? An optimistic view is that a connectome is a major determinant of brain function and a key substrate for simulating a brain. Here we investigate the explanatory power of connectomics using a wiring diagram reconstructed from a larval zebrafish brainstem. We identify modules of strongly connected neurons that turn out to be specialized for different behavioral functions, the control of eye and body movements. We then build a neural network model using a synaptic weight matrix based on the reconstructed wiring diagram. This leads to predictions that statistically match the neural coding of eye position as observed by calcium imaging. Our work shows the promise of connectome-based brain modeling to yield experimentally testable predictions of neural activity and behavior, as well as mechanistic explanations of low-dimensional neural dynamics, a widely observed phenomenon in nervous systems.
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- 2020
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5. Multiscale and multimodal reconstruction of cortical structure and function
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Russel Torres, Adam Bleckert, Alyssa Wilson, William Wong, Derrick Brittain, Nicholas L. Turner, Chris S. Jordan, Franck Polleux, Shang Mu, Forrest Collman, J. Alexander Bae, Liam Paninski, R. Clay Reid, Manuel Castro, Aleksandar Zlateski, Gayathri Mahalingam, Jonathan Zung, William Silversmith, Ran Lu, Sven Dorkenwald, Casey M Schneider-Mizell, Nuno Maçarico da Costa, H. Sebastian Seung, JoAnn Buchanan, Jacob Reimer, Pengcheng Zhou, Shelby Suckow, Nico Kemnitz, Yang Li, Marc Takeno, Jingpeng Wu, Erick Cobos, Szi-chieh Yu, Agnes L. Bodor, Dodam Ih, Runzhe Yang, Kisuk Lee, Sergiy Popovych, Daniel J. Bumbarger, Lynne Becker, Andreas S. Tolias, Leila Elabbady, Ignacio Tartavull, Thomas Macrina, and Emmanouil Froudarakis
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Random graph ,Synapse ,Cortical circuits ,Visual cortex ,medicine.anatomical_structure ,Microglia ,medicine ,Graph (abstract data type) ,Biology ,Inhibitory postsynaptic potential ,Neuroscience ,Structure and function - Abstract
SummaryWe present a semi-automated reconstruction of L2/3 mouse primary visual cortex from 3 million cubic microns of electron microscopic images, including pyramidal and inhibitory neurons, astrocytes, microglia, oligodendrocytes and precursors, pericytes, vasculature, mitochondria, and synapses. Visual responses of a subset of pyramidal cells are included. The data are being made publicly available, along with tools for programmatic and 3D interactive access. The density of synaptic inputs onto inhibitory neurons varies across cell classes and compartments. We uncover a compartment-specific correlation between mitochondrial coverage and synapse density. Frequencies of connectivity motifs in the graph of pyramidal cells are predicted quite accurately from node degrees using the configuration model of random graphs. Cells receiving more connections from nearby cells exhibit stronger and more reliable visual responses. These example findings illustrate the resource’s utility for relating structure and function of cortical circuits as well as for neuronal cell biology.
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- 2020
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6. Reconstruction of neocortex: Organelles, compartments, cells, circuits, and activity
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Nicholas L. Turner, Thomas Macrina, J. Alexander Bae, Runzhe Yang, Alyssa M. Wilson, Casey Schneider-Mizell, Kisuk Lee, Ran Lu, Jingpeng Wu, Agnes L. Bodor, Adam A. Bleckert, Derrick Brittain, Emmanouil Froudarakis, Sven Dorkenwald, Forrest Collman, Nico Kemnitz, Dodam Ih, William M. Silversmith, Jonathan Zung, Aleksandar Zlateski, Ignacio Tartavull, Szi-chieh Yu, Sergiy Popovych, Shang Mu, William Wong, Chris S. Jordan, Manuel Castro, JoAnn Buchanan, Daniel J. Bumbarger, Marc Takeno, Russel Torres, Gayathri Mahalingam, Leila Elabbady, Yang Li, Erick Cobos, Pengcheng Zhou, Shelby Suckow, Lynne Becker, Liam Paninski, Franck Polleux, Jacob Reimer, Andreas S. Tolias, R. Clay Reid, Nuno Maçarico da Costa, and H. Sebastian Seung
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Organelles ,Mice ,Microscopy, Electron ,Pyramidal Cells ,Synapses ,Animals ,Neocortex ,Article ,General Biochemistry, Genetics and Molecular Biology - Abstract
We assembled a semi-automated reconstruction of L2/3 mouse primary visual cortex from ~250×140×90 μm(3) of electron microscopic images, including pyramidal and non-pyramidal neurons, astrocytes, microglia, oligodendrocytes and precursors, pericytes, vasculature, nuclei, mitochondria, and synapses. Visual responses of a subset of pyramidal cells are included. The data are publicly available, along with tools for programmatic and three-dimensional interactive access. Brief vignettes illustrate the breadth of potential applications relating structure to function in cortical circuits and neuronal cell biology. Mitochondria and synapse organization are characterized as a function of path length from the soma. Pyramidal connectivity motif frequencies are predicted accurately using a configuration model of random graphs. Pyramidal cells receiving more connections from nearby cells exhibit stronger and more reliable visual responses. Sample code shows data access and analysis.
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- 2022
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7. Improving Dialog Systems for Negotiation with Personality Modeling
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Runzhe Yang, Karthik Narasimhan, and Jingxiao Chen
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FOS: Computer and information sciences ,Computer Science - Machine Learning ,education.field_of_study ,Computer Science - Computation and Language ,Computer Science - Artificial Intelligence ,Computer science ,business.industry ,media_common.quotation_subject ,Population ,Probabilistic logic ,Inference ,Machine Learning (cs.LG) ,Negotiation ,Artificial Intelligence (cs.AI) ,Personality type ,Theory of mind ,Personality ,Artificial intelligence ,Dialog box ,education ,business ,Computation and Language (cs.CL) ,media_common - Abstract
In this paper, we explore the ability to model and infer personality types of opponents, predict their responses, and use this information to adapt a dialog agent's high-level strategy in negotiation tasks. Inspired by the idea of incorporating a theory of mind (ToM) into machines, we introduce a probabilistic formulation to encapsulate the opponent's personality type during both learning and inference. We test our approach on the CraigslistBargain dataset and show that our method using ToM inference achieves a 20% higher dialog agreement rate compared to baselines on a mixed population of opponents. We also find that our model displays diverse negotiation behavior with different types of opponents., Comment: ACL 2021. 12 pages, 3 figures
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- 2020
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8. On-line Dialogue Policy Learning with Companion Teaching
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Kai Yu, Xiang Zhou, Runzhe Yang, Lu Chen, Zihao Ye, and Cheng Chang
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Knowledge management ,Computer science ,business.industry ,02 engineering and technology ,computer.software_genre ,030507 speech-language pathology & audiology ,03 medical and health sciences ,Action (philosophy) ,User experience design ,Human–computer interaction ,0202 electrical engineering, electronic engineering, information engineering ,Key (cryptography) ,020201 artificial intelligence & image processing ,Policy learning ,Line (text file) ,Dialog system ,0305 other medical science ,business ,computer - Abstract
On-line dialogue policy learning is the key for building evolvable conversational agent in real world scenarios. Poor initial policy can easily lead to bad user experience and consequently fail to attract sufficient users for policy training. A novel framework, companion teaching, is proposed to include a human teacher in the dialogue policy training loop to address the cold start problem. Here, dialogue policy is trained using not only user’s reward, but also teacher’s example action as well as estimated immediate reward at turn level. Simulation experiments showed that, with small number of human teaching dialogues, the proposed approach can effectively improve user experience at the beginning and smoothly lead to good performance with more user interaction data.
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- 2017
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9. Agent-Aware Dropout DQN for Safe and Efficient On-line Dialogue Policy Learning
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Runzhe Yang, Cheng Chang, Kai Yu, Xiang Zhou, and Lu Chen
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Knowledge management ,Scope (project management) ,business.industry ,Computer science ,Control (management) ,Machine learning ,computer.software_genre ,01 natural sciences ,030507 speech-language pathology & audiology ,03 medical and health sciences ,0103 physical sciences ,Line (geometry) ,Reinforcement learning ,Policy learning ,Artificial intelligence ,0305 other medical science ,business ,010301 acoustics ,computer ,Dropout (neural networks) - Abstract
Hand-crafted rules and reinforcement learning (RL) are two popular choices to obtain dialogue policy. The rule-based policy is often reliable within predefined scope but not self-adaptable, whereas RL is evolvable with data but often suffers from a bad initial performance. We employ a companion learning framework to integrate the two approaches for on-line dialogue policy learning, in which a pre-defined rule-based policy acts as a “teacher” and guides a data-driven RL system by giving example actions as well as additional rewards. A novel agent-aware dropout Deep Q-Network (AAD-DQN) is proposed to address the problem of when to consult the teacher and how to learn from the teacher’s experiences. AAD-DQN, as a data-driven student policy, provides (1) two separate experience memories for student and teacher, (2) an uncertainty estimated by dropout to control the timing of consultation and learning. Simulation experiments showed that the proposed approach can significantly improve both safetyand efficiency of on-line policy optimization compared to other companion learning approaches as well as supervised pre-training using static dialogue corpus.
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- 2017
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10. Affordable On-line Dialogue Policy Learning
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Cheng Chang, Lu Chen, Runzhe Yang, Kai Yu, and Xiang Zhou
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Knowledge management ,Training set ,business.industry ,Computer science ,Process (engineering) ,020206 networking & telecommunications ,02 engineering and technology ,030507 speech-language pathology & audiology ,03 medical and health sciences ,Risk analysis (engineering) ,User experience design ,0202 electrical engineering, electronic engineering, information engineering ,Key (cryptography) ,Policy learning ,0305 other medical science ,business - Abstract
The key to building an evolvable dialogue system in real-world scenarios is to ensure an affordable on-line dialogue policy learning, which requires the on-line learning process to be safe, efficient and economical. But in reality, due to the scarcity of real interaction data, the dialogue system usually grows slowly. Besides, the poor initial dialogue policy easily leads to bad user experience and incurs a failure of attracting users to contribute training data, so that the learning process is unsustainable. To accurately depict this, two quantitative metrics are proposed to assess safety and efficiency issues. For solving the unsustainable learning problem, we proposed a complete companion teaching framework incorporating the guidance from the human teacher. Since the human teaching is expensive, we compared various teaching schemes answering the question how and when to teach, to economically utilize teaching budget, so that make the online learning process affordable.
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- 2017
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