237 results on '"Ruppé, Etienne"'
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2. WHO global research priorities for antimicrobial resistance in human health
3. Correction: Genes mcr improve the intestinal fitness of pathogenic E. coli and balance their lifestyle to commensalism
4. Towards monitoring of antimicrobial resistance in the environment: For what reasons, how to implement it, and what are the data needs?
5. Genes mcr improve the intestinal fitness of pathogenic E. coli and balance their lifestyle to commensalism
6. Messages from the seventh international conference on clinical metagenomics (ICCMg7)
7. Inferring antibiotic susceptibility from metagenomic data: dream or reality?
8. Oropharyngeal and intestinal concentrations of opportunistic pathogens are independently associated with death of SARS-CoV-2 critically ill adults
9. Deciphering polymorphism in 61,157 Escherichia coli genomes via epistatic sequence landscapes
10. Effect of bacterial DNA enrichment on detection and quantification of bacteria in an infected tissue model by metagenomic next-generation sequencing
11. Inter-phylum circulation of a beta-lactamase-encoding gene: a rare but observable event
12. Is the term “anti-anaerobic” still relevant?
13. Messages from the Fourth International Conference on Clinical Metagenomics
14. Messages from the third International Conference on Clinical Metagenomics (ICCMg3)
15. Lessons from a global antimicrobial resistance surveillance network
16. Messages from the second International Conference on Clinical Metagenomics (ICCMg2)
17. Messages from the first International Conference on Clinical Metagenomics (ICCMg)
18. ResFinderFG v2.0: a database of antibiotic resistance genes obtained by functional metagenomics
19. ResFinderFG v2.0: a database of antibiotic resistance genes obtained by functional metagenomics
20. Clinical Metagenomics for the Diagnosis of Hospital-acquired Infections: Promises and Hurdles
21. Dissemination of carbapenemase-producing Enterobacterales in the community of Rawalpindi, Pakistan
22. A roadmap for the generation of benchmarking resources for antimicrobial resistance detection using next generation sequencing:[version 2; peer review: 1 approved, 2 approved with reservations]
23. Simultaneous Hospital Outbreaks of New Delhi Metallo-β-Lactamase-Producing Enterobacterales Unraveled Using Whole-Genome Sequencing
24. Contribution of Clinical Metagenomics to the Diagnosis of Bone and Joint Infections
25. A roadmap for the generation of benchmarking resources for antimicrobial resistance detection using next generation sequencing
26. Massive Increase, Spread, and Exchange of Extended Spectrum β-Lactamase—Encoding Genes Among Intestinal Enterobacteriaceae in Hospitalized Children With Severe Acute Malnutrition in Niger
27. Additional file 1 of Oropharyngeal and intestinal concentrations of opportunistic pathogens are independently associated with death of SARS-CoV-2 critically ill adults
28. Emergence and Dissemination of Extended-Spectrum β-Lactamase—Producing Escherichia coli in the Community: Lessons from the Study of a Remote and Controlled Population
29. Methicillin-Resistant Coagulase-Negative Staphylococci in the Community: High Homology of SCCmec IVa between Staphylococcus epidermidis and Major Clones of Methicillin-Resistant Staphylococcus aureus
30. International circulation of aztreonam/avibactam-resistant NDM-5-producing Escherichia coli isolates: successful epidemic clones
31. Evaluation of SARS-CoV-2 in semen, seminal plasma, and spermatozoa pellet of COVID-19 patients in the acute stage of infection
32. Phylum barrier and Escherichia coli intra-species phylogeny drive the acquisition of antibiotic-resistance genes
33. Endocarditis caused by Thalassospira sp
34. A roadmap for the generation of benchmarking resources for antimicrobial resistance detection using next generation sequencing
35. Modeling the bacterial dynamics in the gut microbiota following an antibiotic‐induced perturbation.
36. Two original observations concerning bacterial infections in COVID-19 patients hospitalized in intensive care units during the first wave of the epidemic in France
37. A roadmap for the generation of benchmarking resources for antimicrobial resistance detection using next generation sequencing
38. Relationship between the composition of the intestinal microbiota and the tracheal and intestinal colonization by opportunistic pathogens in intensive care patients
39. Community-acquired infection caused by the uncommon hypervirulent Klebsiella pneumoniae ST66-K2 lineage
40. Prediction of the intestinal resistome by a three-dimensional structure-based method
41. Prediction of the intestinal resistome by a three-dimensional structure-based method
42. Erratum to: Abundance and diversity of the faecal resistome in slaughter pigs and broilers in nine European countries (Nature Microbiology, (2018), 3, 8, (898-908), 10.1038/s41564-018-0192-9)
43. The intestinal microbiota predisposes to traveller’s diarrhoea and to the carriage of multidrug-resistant Enterobacteriaceae after travelling to tropical regions
44. Additional file 7: of In-depth resistome analysis by targeted metagenomics
45. Additional file 4: of In-depth resistome analysis by targeted metagenomics
46. Additional file 8: of In-depth resistome analysis by targeted metagenomics
47. Additional file 1: of In-depth resistome analysis by targeted metagenomics
48. Additional file 2: of In-depth resistome analysis by targeted metagenomics
49. Additional file 9: of In-depth resistome analysis by targeted metagenomics
50. Additional file 3: of In-depth resistome analysis by targeted metagenomics
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