1. Timely intervention and control of a novel coronavirus (COVID-19) outbreak at a large skilled nursing facility—San Francisco, California, 2020
- Author
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Debra A. Wadford, Naveena Bobba, Ayanna S Bennett, Stephanie Trammell, Susan S. Philip, Justin P Dauterman, Guixia Yu, Beth L. Rubenstein, Ellora Karmarkar, Pauli N Amornkul, Charles Y. Chiu, Irin Blanco, Idamae Kennedy, Lisa Hoo, Seema Jain, Janice K. Louie, Erin Epson, Wilmie Hathaway, Scot Federman, Amber Vasquez, Nawzaneen Z Talai, Jennifer Yu, Xianding Deng, Zenith Khwaja, Troy Williams, Godfred Masinde, Juliet Stoltey, Amie DuBois, David A Miller, Ejovwoke F Dosunmu, Melissa Ongpin, Patrick K. Moonan, Adrian Smith, and Wendy Lu
- Subjects
Microbiology (medical) ,medicine.medical_specialty ,Isolation (health care) ,Epidemiology ,Psychological intervention ,Prevalence ,medicine.disease_cause ,Medical and Health Sciences ,Disease Outbreaks ,Cohort Studies ,Vaccine Related ,03 medical and health sciences ,0302 clinical medicine ,Biodefense ,medicine ,Humans ,Infection control ,030212 general & internal medicine ,Lung ,Skilled Nursing Facilities ,030304 developmental biology ,Coronavirus ,0303 health sciences ,SARS-CoV-2 ,business.industry ,Prevention ,COVID-19 ,Outbreak ,Emerging Infectious Diseases ,Good Health and Well Being ,Infectious Diseases ,Emergency medicine ,Original Article ,San Francisco ,Infection ,business ,Contact tracing ,Biotechnology ,Cohort study - Abstract
Objective:To describe epidemiologic and genomic characteristics of a severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) outbreak in a large skilled-nursing facility (SNF), and the strategies that controlled transmission.Design, setting, and participants:This cohort study was conducted during March 22–May 4, 2020, among all staff and residents at a 780-bed SNF in San Francisco, California.Methods:Contact tracing and symptom screening guided targeted testing of staff and residents; respiratory specimens were also collected through serial point prevalence surveys (PPSs) in units with confirmed cases. Cases were confirmed by real-time reverse transcription–polymerase chain reaction testing for SARS-CoV-2, and whole-genome sequencing (WGS) was used to characterize viral isolate lineages and relatedness. Infection prevention and control (IPC) interventions included restricting from work any staff who had close contact with a confirmed case; restricting movement between units; implementing surgical face masking facility-wide; and the use of recommended PPE (ie, isolation gown, gloves, N95 respirator and eye protection) for clinical interactions in units with confirmed cases.Results:Of 725 staff and residents tested through targeted testing and serial PPSs, 21 (3%) were SARS-CoV-2 positive: 16 (76%) staff and 5 (24%) residents. Fifteen cases (71%) were linked to a single unit. Targeted testing identified 17 cases (81%), and PPSs identified 4 cases (19%). Most cases (71%) were identified before IPC interventions could be implemented. WGS was performed on SARS-CoV-2 isolates from 4 staff and 4 residents: 5 were of Santa Clara County lineage and the 3 others were distinct lineages.Conclusions:Early implementation of targeted testing, serial PPSs, and multimodal IPC interventions limited SARS-CoV-2 transmission within the SNF.
- Published
- 2020
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