39 results on '"B. Ravindran Durai Nayagam"'
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2. 1,1′-[(2,3,5,6-Tetramethyl-1,4-phenylene)bis(methylene)]dipiperidine
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P. Selvarathy Grace, Jeyaraman Selvaraj Nirmalram, B. Ravindran Durai Nayagam, and Dieter Schollmeyer
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crystal structure ,piperidine-substituted durene ,intramolecular C—H...N hydrogen bond ,Crystallography ,QD901-999 - Abstract
The asymmetric unit of the title compound, C22H36N2, comprises one half-molecule, the other half being generated by a center of inversion. The piperidine ring adopts a chair conformation, with the exocyclic N—C bond in an equatorial orientation. A short intramolecular C—H...N hydrogen bond occurs and forms an S(6) motif. No directional interactions beyond van der Waals contacts are observed between the molecules, which form a wave-like supramolecular architecture.
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- 2018
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3. 1-Benzyl-1H-benzotriazole 3-oxide monohydrate
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P. Selvarathy Grace, Samuel Robinson Jebas, B. Ravindran Durai Nayagam, and Dieter Schollmeyer
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Crystallography ,QD901-999 - Abstract
In the title hydrate, C13H11N3O·H2O, the benzotriazole ring system is planar (r.m.s. deviation = 0.007 Å) and is almost orthogonal to the phenyl ring to which it is linked by a methylene group, forming a dihedral angle of 81.87 (15)°. In the crystal, molecules are linked into chains along [001] by O—H...O hydrogen bonds. The chains are consolidated into a three-dimensional architecture by C—H...O, C—H...π and π–π [centroid–centroid distance between the five- and six-membered rings of the benzotriazole ring system = 3.595 (3) Å] interactions.
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- 2012
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4. 1-Benzyl-1H-benzotriazole 3-oxide–1-hydroxy-1H-benzotriazole (1/1)
- Author
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P. Selvarathy Grace, Samuel Robinson Jebas, B. Ravindran Durai Nayagam, and Dieter Schollmeyer
- Subjects
Crystallography ,QD901-999 - Abstract
In the title compound, C6H5N3O·C13H11N3O, the benzotriazole ring system in the 1-benzyl-1H-benzotriazole 3-oxide (A) molecule is close to being planar (r.m.s. deviation = 0.011 Å); its mean plane forms a dihedral angle of 67.56 (7)° with that of the attached phenyl ring. The benzotriazole ring system in the 1-hydroxybenzotriazole (B) molecule is also close to being planar (r.m.s. deviation = 0.010 Å). In the crystal, weak C—H...O and C—H...π interactions are present. The A and B molecules are linked by an O—H...N hydrogen bond.
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- 2012
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5. 1-Benzyloxy-1H-benzotriazole
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Samuel Robinson Jebas, P. Selvarathy Grace, B. Ravindran Durai Nayagam, and Dieter Schollmeyer
- Subjects
Crystallography ,QD901-999 - Abstract
In the title compound, C13H11N3O, the dihedral angle between the benzotriazole ring system [maximum deviation = 0.027 (16) Å] and the benzene ring is 10.28 (9)°. The C—C—O—N bond adopts an anti conformation [torsion angle = −177.11 (16)°]. In the crystal, the molecules interact via weak C—H...π interactions and aromatic π–π stacking [centroid-to-centroid distance = 3.731 (12) Å].
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- 2012
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6. catena-Poly[[(18-crown-6-κ6O)potassium]-μ-chlorido-[(1H-benzotriazol-1-ol-κN3)chloridoplatinum(II)]-μ-(benzotriazol-1-olato-κ2N3:O)]
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B. Ravindran Durai Nayagam, Samuel Robinson Jebas, J. Shakina, R. Murugesan, and Dieter Schollmeyer
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Crystallography ,QD901-999 - Abstract
In the structure of the title compound, [KPt(C6H4N3O)Cl2(C6H5N3O)(C12H24O6)], the PtII atom is in a distorted square-planar geometry. The crystal structure is consolidated by O—H...O hydrogen bonds. The measured crystal was a non-merohedral twin with four components.
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- 2010
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7. Tetra-μ-chlorido-bis(18-crown-6)platinum(II)dipotassium(I)
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B. Ravindran Durai Nayagam, Samuel Robinson Jebas, D. Kalavathy, R. Murugesan, and Dieter Schollmeyer
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Crystallography ,QD901-999 - Abstract
In the title compound, [K2PtCl4(C12H24O6)2], the PtII ion is located on an inversion centre and is coordinated by four Cl atoms, forming a square-planar geometry. The KI ion is coordinated by six O atoms of the crown ether and two bridging Cl atoms. The KI ion is displaced by 0.756 (2) Å from the mean plane of the six O atoms of the crown ether. The molecules are connected by weak C—H...O hydrogen bonds, forming an infinite two-dimensional network parallel to the (10overline{2}) plane. Intra- and intermolecular C—H...Cl hydrogen bonds are also observed.
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- 2010
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8. 1-Mesitylmethyl-1Hbenzotriazole 3-oxide
- Author
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Dieter Schollmeyer, R. Murugesan., J. Shakina, Samuel Robinson Jebas, and B. Ravindran Durai Nayagam
- Subjects
Crystallography ,QD901-999 - Abstract
In the title compound, C16H17N3O, the benzotriazole ring forms a dihedral angle of 77.25 (6)° with the phenyl ring. The benzotriazole ring is essentially planar with a maximum deviation of 0.012 (19) Å. Weak intermolecular C—H...O hydrogen bonds form R22(10) motifs. The crystal packing is consolidated by π—π interactions with centroid–centroid distances of 3.5994 (12) Å together with very weak C—H...π interactions.
- Published
- 2010
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9. catena-Poly[[aquasodium(I)]-μ-[2,2′-(disulfanediyl)bis(pyridine N-oxide)]-μ-(pyridine-2-thiolato 1-oxide)]
- Author
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B. Ravindran Durai Nayagam, Samuel Robinson Jebas, J. Jebaraj Devadasan, R. Murugesan, and Dieter Schollmeyer
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Crystallography ,QD901-999 - Abstract
There are two monomeric units in the asymmetric unit of the polymeric title compound, [Na(C5H4NOS)(C10H8N2O2S2)(H2O)]n. The NaI ions are six coordinated by four O atoms, one S atom and one water molecule, forming a slightly distorted octahedral geometry. An intramolecular O—H...O hydrogen bond stabilizes the conformation of the molecule. The crystal packing is consolidated by intermolecular O—H...O, O—H...N and O—H...S hydrogen bonds, π–π interactions [with centroid–centroid distances of 3.587 (2) Å] together with weak C—H...π interactions. The molecules are linked into polymeric chains along the b-axis direction.
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- 2010
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10. Bis(4-aminopyridinium) tetrachloridocobaltate(II)
- Author
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S. Alfred Cecil Raj, Dieter Schollmeyer, B. Ravindran Durai Nayagam, A. Sinthiya, and Samuel Robinson Jebas
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Crystallography ,QD901-999 - Abstract
In the title compound, (C5H7N2)2[CoCl4], the cobalt(II) ion is coordinated by four chloride ions in a slightly distorted tetrahedral geometry. The crystal packing is stabilized by intermolecular N—H...Cl hydrogen bonding, forming a three-dimensional network. The crystal was a non-merohedral twin emulating tetragonal symmetry, but being in fact orthorhombic.
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- 2009
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11. 1-(2,3,5,6-Tetramethylbenzyloxy)-1H-benzotriazole
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B. Ravindran Durai Nayagam, Samuel Robinson Jebas, J. P Edward Rajkumar, and Dieter Schollmeyer
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Crystallography ,QD901-999 - Abstract
In the title compound, C17H19N3O, the benzotriazole ring is essentially planar, with a maximum deviation of 0.0069 (15) Å. The mean plane of the benzotriazole ring forms a dihedral angle of 13.16 (4)° with the mean plane of the benzene ring. The crystal packing is stabilized by π–π stacking interactions, with a centroid–centroid distance of 3.8077 (12) Å, together with weak C—H...π interactions. Molecules are stacked along the a axis.
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- 2009
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12. Tetraaquabis[3-(2-pyridylsulfanyl)propionato N-oxide]nickel(II)
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B. Ravindran Durai Nayagam, Samuel Robinson Jebas, J. P. Edward Rajkumar, and Dieter Schollmeyer
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Crystallography ,QD901-999 - Abstract
In the centrosymmetric title compound, [Ni(C8H8NO3S)2(H2O)4], the NiII ion, which lies on an inversion centre, is six coordinated by four water molecules and two propionate O atoms from two 2-pyridylsulfanylpropionate N-oxide ligands, forming a slightly distorted octahedral geometry. An intramolecular O—H...O hydrogen bond stabilizes the molecular conformation. The crystal packing is consolidated by intermolecular O—H...O and C—H...O hydrogen bonding.
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- 2009
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13. 1,1′-[2,3,5,6-Tetramethyl-p-phenylenebis(methyleneoxy)]di-1H-benzotriazole
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B. Ravindran Durai Nayagam, Samuel Robinson Jebas, Caroline Daisy, and Dieter Schollmeyer
- Subjects
Crystallography ,QD901-999 - Abstract
The complete molecule of the title compound, C24H24N6O2, is generated by a crystallographic inversion centre. The benzotriazole rings form dihedral angles of 2.10 (7)° with the central aromatic ring. The crystal packing is consolidated by π–π interactions, with centroid–centroid distances of 3.6234 (10) Å, together with weak C—H...π interactions.
- Published
- 2009
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14. Tetrakis{2,4-bis[(1-oxo-2-pyridyl)sulfanylmethyl]mesitylene} acetone hemisolvate 11.5-hydrate
- Author
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B. Ravindran Durai Nayagam, Samuel Robinson Jebas, P. Selvarathy Grace, and Dieter Schollmeyer
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Crystallography ,QD901-999 - Abstract
In the crystal structure of the title compound, 4C21H22N2O2S2·0.5C3H6O·11.5H2O, there are four crystallographically independent molecules (A, B, C, D) with similar geometries, 11 water molecules and a solvent acetone molecule which is disordered with a water molecule with occupancy factors of 0.5:0.5. The dihedral angles formed by the mesitylene ring with the two pyridyl rings are 82.07 (3) and 78.39 (3)° in molecule A, 86.20 (3) and 82.29 (3)° in molecule B, 81.05 (3) and 76.0 (4)° in molecule C, 86.0 (3) and 80.9 (3)° in moleule D. The two pyridyl rings form dihedral angles of 41.17 (4), 64.01 (3), 81.9 (3) and 82.25 (3)° in molecules A, B, C and D, respectively. The crystal structure is stabilized by intermolecular O—H...O hydrogen bonds and possible weak C—H...π interactions. Some short intramolecular S...O contacts are apparent [2.684 (4)–2.702 (4) Å].
- Published
- 2009
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15. Octaakis(4-aminopyridine)-1κ4N1,2κ4N1-aqua-2κO-μ-carbonato-1:2κ3O,O′:O′′-dinickel(II) dichloride pentahydrate
- Author
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Hoong-Kun Fun, A Sinthiya, Samuel Robinson Jebas, B. Ravindran Durai Nayagam, and S. Alfred Cecil Raj
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Crystallography ,QD901-999 - Abstract
In the title compound, [Ni2(CO3)(C5H6N2)8(H2O)]Cl2·5H2O, one of the the NiII ions is six-coordinated in a distorted octahedral geometry, with the equatorial plane defined by four pyridine N atoms from four aminopyridine ligands, the axial positions being occupied by one water O and a carbonate O atom. The other NiII ion is also six-coordinated, by four other pyridine N atoms from four other aminopyridine ligands and two carbonate O atoms to complete a distorted octahedral geometry. In the crystal structure, molecules are linked into an infinite three-dimensional network by O—H...O, N—H...Cl, N—H...O, O—H...N, C—H...O, C—H...N and C/N—H...π interactions involving the pyridine rings.
- Published
- 2008
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16. 2-(2,3,5,6-Tetramethylbenzylsulfanyl)pyridine N-oxide
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Dieter Schollmeyer, J. Jebaraj Devadasan, Samuel Robinson Jebas, and B. Ravindran Durai Nayagam
- Subjects
Crystallography ,QD901-999 - Abstract
In the title compound, C16H19NOS, the durene ring and the oxopyridyl ring form a dihedral angle of 82.26 (7)°. The crystal structure is stabilized by intermolecular C—H...O hydrogen bonds, weak C—H...π interactions and π–π interactions [centroid–centroid distance of 3.4432 (19) Å], together with intramolecular S...O [2.657 (2) Å] short contacts.
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- 2008
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17. 2-(Mesitylmethylsulfanyl)pyridine N-oxide monohydrate
- Author
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Dieter Schollmeyer, H. Johnson Jeyakumar, Samuel Robinson Jebas, and B. Ravindran Durai Nayagam
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Crystallography ,QD901-999 - Abstract
In the title compound, C15H17NOS·H2O, the benzene and pyridine rings form a dihedral angle of 71.18 (2)°. The intramolecular S...O distance [2.737 (3) Å] is shorter than expected and, in terms of hybridization principles, the N—C—S angle [114.1 (2)°] is smaller than expected. The crystal structure is stabilized by intermolecular O—H...O and weak C—H...O hydrogen bonds. In addition, weak π–π stacking interactions with a centroid–centroid distance of 3.778 (3) Å are also observed.
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- 2008
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18. 2-(Benzylsulfanyl)pyridine N-oxide
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Dieter Schollmeyer, H. Johnson Jeyakumar, Samuel Robinson Jebas, and B. Ravindran Durai Nayagam
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Crystallography ,QD901-999 - Abstract
In the title compound, C12H11NOS, the dihedral angle between the oxopyridinium and phenyl rings is 58.40 (1)°. The crystal structure is stabilized by C—H...O hydrogen bonds, π–π stacking interactions involving the pyridinium rings [centroid–centroid distance = 3.6891 (9) Å] and C—H...π interactions.
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- 2008
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19. cis-Bis(2-sulfidopyridine N-oxide)platinum(II)
- Author
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Dieter Schollmeyer, Samuel Robinson Jebas, and B. Ravindran Durai Nayagam
- Subjects
Crystallography ,QD901-999 - Abstract
In the crystal structure of the title complex, [Pt(C5H4NOS)2], the Pt atom is coordinated by two O atoms and two S atoms in a cis configuration, forming a distorted square-planar coordination geometry. The molecule exhibits pseudo-C2v symmetry and is essentially planar, with a maximum deviation from planarity of 0.0124 (2) Å. The dihedral angle between the two pyridine rings is 5.85 (2)°.
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- 2008
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20. 2,2′-[2,3,5,6-Tetramethyl-p-phenylenebis(methylenethio)]bis(pyridine N-oxide)
- Author
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Dieter Schollmeyer, Selvarathi Grace, Samuel Robinson Jebas, and B. Ravindran Durai Nayagam
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Crystallography ,QD901-999 - Abstract
Molecules of the title compound, C22H24N2O2S2, lie across centres of inversion. The two thiopyridine N-oxide groups adopt a stepped trans configuration with respect to the benzene ring, by virtue of the symmetry. The oxopyridinium ring forms a dihedral angle of 79.9 (2)° with the benzene ring. The crystal structure is stabilized by a strong π–π interaction between the pyridinium rings of adjacent molecules [ring centroid–centroid distance = 3.464 (3) Å].
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- 2008
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21. Single Crystal XRD and Quantum Chemical Studies on Non-Proton Transfer Co-Crystals of 2-Amino-5-nitropyridine with Phenylthioacetic Acid and Barbituric Acid
- Author
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Nattamai Bhuvanesh, Shunmuganarayanan Athimoolam, P. Palanisamy, Sudalaiandi Kumaresan, V. Velmurugan, and B. Ravindran Durai Nayagam
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Quantum chemical ,chemistry.chemical_compound ,Crystallography ,Barbituric acid ,Proton ,chemistry ,2-amino-5-nitropyridine ,General Chemistry ,010402 general chemistry ,010403 inorganic & nuclear chemistry ,01 natural sciences ,Single crystal ,0104 chemical sciences - Published
- 2018
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22. Synthesis, molecular docking, and in silico ADMET studies of 4-benzyl-1-(2,4,6-trimethyl-benzyl)-piperidine: Potential Inhibitor of SARS-CoV2
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R. Nandini Asha, Nattamai Bhuvanesh, and B. Ravindran Durai Nayagam
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Molecular Conformation ,Crystallography, X-Ray ,01 natural sciences ,Biochemistry ,Molecular Docking Simulation ,DFT ,Antiviral Agents ,Article ,Viral Matrix Proteins ,chemistry.chemical_compound ,ADME studies ,Piperidines ,Computational chemistry ,Drug Discovery ,SARS-COV2 ,Molecule ,Humans ,Reactivity (chemistry) ,Molecular Biology ,HOMO/LUMO ,Density Functional Theory ,ADME ,ComputingMethodologies_COMPUTERGRAPHICS ,Alanine ,Binding Sites ,010405 organic chemistry ,Chemistry ,SARS-CoV-2 ,Crystal structure ,Organic Chemistry ,COVID-19 ,Carbon-13 NMR ,Adenosine Monophosphate ,0104 chemical sciences ,010404 medicinal & biomolecular chemistry ,Molecular docking ,Spike Glycoprotein, Coronavirus ,Proton NMR ,Piperidine ,Half-Life - Abstract
Graphical abstract, Nowadays, over 200 countries face a wellbeing emergency because of epidemiological disease COVID-19 caused by the SARS-CoV-2 virus. It will cause a very high effect on the world’s economy and the worldwide health sector. The present work is an investigation of the newly synthesized 4-benzyl-1-(2,4,6-trimethyl-benzyl)-piperidine (M1BZP) molecule’s inhibitory potential against important protein targets of SARS-CoV-2 using computational approaches. M1BZP crystallizes in monoclinic type with P1211 space group. For the title compound M1BZP, spectroscopic characterization like 1H NMR, 13C NMR, FTIR, were carried out. The geometry of the compound had been optimized by the DFT method and its results were compared with the X-ray diffraction data. The calculated energies for the Highest Occupied Molecular Orbital (HOMO) and the Lowest Unoccupied Molecular Orbital (LUMO) showed the stability and reactivity of the title compound. Intermolecular interactions in the crystal network were determined using Hirshfeld surface analyses. The molecular electrostatic potential (MEP) picture was drawn using the same level of theory to visualize the chemical reactivity and charge distribution on the molecule. Molecular docking study performed for the synthesized compound revealed an efficient interaction with the COVID-19 protease and resulted in good activities. We hope the present study would help workers in the field to develop potential vaccines and therapeutics against the novel coronavirus. Virtual ADME studies were carried out as well and a relationship between biological, electronic, and physicochemical qualifications of the target compound was determined. Toxicity prediction by computational technique for the title compound was also carried out.
- Published
- 2021
23. 1-Benzyl-1H-benzotriazole 3-oxide-1-hy-droxy-1H-benzotriazole (1/1)
- Author
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Dieter Schollmeyer, Samuel Robinson Jebas, B. Ravindran Durai Nayagam, and P. Selvarathy Grace
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Benzotriazole ,Hydrogen bond ,Oxide ,1h benzotriazole ,General Chemistry ,Dihedral angle ,Condensed Matter Physics ,Ring (chemistry) ,Bioinformatics ,Organic Papers ,Crystal ,chemistry.chemical_compound ,Crystallography ,chemistry ,Molecule ,General Materials Science - Abstract
In the title compound, C6H5N3O·C13H11N3O, the benzotriazole ring system in the 1-benzyl-1H-benzotriazole 3-oxide (A) molecule is close to being planar (r.m.s. deviation = 0.011 Å); its mean plane forms a dihedral angle of 67.56 (7)° with that of the attached phenyl ring. The benzotriazole ring system in the 1-hydroxybenzotriazole (B) molecule is also close to being planar (r.m.s. deviation = 0.010 Å). In the crystal, weak C—H...O and C—H...π interactions are present. TheAandBmolecules are linked by an O—H...N hydrogen bond.
- Published
- 2012
24. 1-Mesitylmethyl-1Hbenzotriazole 3-oxide
- Author
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R. Murugesan, Samuel Robinson Jebas, J. Shakina, B. Ravindran Durai Nayagam, and Dieter Schollmeyer
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Benzotriazole ,Hydrogen bond ,Maximum deviation ,Oxide ,General Chemistry ,Dihedral angle ,Condensed Matter Physics ,Ring (chemistry) ,Bioinformatics ,Organic Papers ,lcsh:Chemistry ,Crystal ,Crystallography ,chemistry.chemical_compound ,lcsh:QD1-999 ,chemistry ,General Materials Science - Abstract
In the title compound, C16H17N3O, the benzotriazole ring forms a dihedral angle of 77.25 (6)° with the phenyl ring. The benzotriazole ring is essentially planar with a maximum deviation of 0.012 (19) Å. Weak intermolecular C—H...O hydrogen bonds form R22(10) motifs. The crystal packing is consolidated by π—π interactions with centroid–centroid distances of 3.5994 (12) Å together with very weak C—H...π interactions.
- Published
- 2010
25. 2-(Mesitylmethylsulfanyl)pyridine N-oxide monohydrate
- Author
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B. Ravindran Durai Nayagam, H. Johnson Jeyakumar, Dieter Schollmeyer, and Samuel Robinson Jebas
- Subjects
Chemistry ,Hydrogen bond ,Stacking ,Pyridine-N-oxide ,General Chemistry ,Crystal structure ,Dihedral angle ,Condensed Matter Physics ,Bioinformatics ,Organic Papers ,lcsh:Chemistry ,chemistry.chemical_compound ,Crystallography ,lcsh:QD1-999 ,Pyridine ,General Materials Science ,Benzene - Abstract
In the title compound, C15H17NOS·H2O, the benzene and pyridine rings form a dihedral angle of 71.18 (2)°. The intramolecular S...O distance [2.737 (3) Å] is shorter than expected and, in terms of hybridization principles, the N—C—S angle [114.1 (2)°] is smaller than expected. The crystal structure is stabilized by intermolecular O—H...O and weak C—H...O hydrogen bonds. In addition, weak π–π stacking interactions with a centroid–centroid distance of 3.778 (3) Å are also observed.
- Published
- 2008
26. Chlorido(dimethyl sulfoxide)(pyridine-2-thiolato N-oxide-κ2S,O)platinum(II)
- Author
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P. Selvarathy Grace, B. Ravindran Durai Nayagam, Dieter Schollmeyer, and Samuel Robinson Jebas
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chemistry.chemical_classification ,Chemistry ,Hydrogen bond ,Ligand ,Dimethyl sulfoxide ,Oxide ,chemistry.chemical_element ,General Chemistry ,Condensed Matter Physics ,Bioinformatics ,Medicinal chemistry ,Ion ,lcsh:Chemistry ,chemistry.chemical_compound ,lcsh:QD1-999 ,Pyridine ,Thiol ,General Materials Science ,Platinum - Abstract
The asymmetric unit of the title compound, [Pt(C5H4NOS)Cl(C2H6OS)], contains two independent complex molecules having similar geometries. Each PtII atom is four-coordinated in a distorted square-planar geometry by S and O atoms of one pyridine N-oxide ligand, the S atom of one dimethyl sulfoxide molecule and one terminal Cl− ion. The molecules are linked into a three-dimensional framework by C—H...O and C—H...Cl hydrogen bonds.
- Published
- 2008
27. Chlorido(dimethyl sulfoxide)(pyridine-2-thiolato N-oxide-κ2S,O)platinum(II)
- Author
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Dieter Schollmeyer, P. Selvarathy Grace, Samuel Robinson Jebas, and B. Ravindran Durai Nayagam
- Subjects
lcsh:Chemistry ,lcsh:QD1-999 - Abstract
The asymmetric unit of the title compound, [Pt(C5H4NOS)Cl(C2H6OS)], contains two independent complex molecules having similar geometries. Each PtII atom is four-coordinated in a distorted square-planar geometry by S and O atoms of one pyridine N-oxide ligand, the S atom of one dimethyl sulfoxide molecule and one terminal Cl− ion. The molecules are linked into a three-dimensional framework by C—H...O and C—H...Cl hydrogen bonds.
- Published
- 2008
28. Chlorido(dimethyl sulfoxide)(pyridine-2-thiol-ato N-oxide-κS,O)platinum(II)
- Author
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B, Ravindran Durai Nayagam, Samuel Robinson, Jebas, P, Selvarathy Grace, and Dieter, Schollmeyer
- Subjects
Metal-Organic Papers - Abstract
The asymmetric unit of the title compound, [Pt(C(5)H(4)NOS)Cl(C(2)H(6)OS)], contains two independent complex mol-ecules having similar geometries. Each Pt(II) atom is four-coordinated in a distorted square-planar geometry by S and O atoms of one pyridine N-oxide ligand, the S atom of one dimethyl sulfoxide mol-ecule and one terminal Cl(-) ion. The mol-ecules are linked into a three-dimensional framework by C-H⋯O and C-H⋯Cl hydrogen bonds.
- Published
- 2008
29. cis-Bis(2-sulfidopyridine N-oxide)platinum(II)
- Author
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B. Ravindran Durai Nayagam, Samuel Robinson Jebas, and Dieter Schollmeyer
- Subjects
Metal-Organic Papers ,Crystallography ,Chemistry ,Oxide ,chemistry.chemical_element ,General Chemistry ,Crystal structure ,Dihedral angle ,Condensed Matter Physics ,Bioinformatics ,Planarity testing ,chemistry.chemical_compound ,QD901-999 ,Pyridine ,General Materials Science ,Platinum ,Cis–trans isomerism ,Coordination geometry - Abstract
In the crystal structure of the title complex, [Pt(C5H4NOS)2], the Pt atom is coordinated by two O atoms and two S atoms in a cis configuration, forming a distorted square-planar coordination geometry. The molecule exhibits pseudo-C2v symmetry and is essentially planar, with a maximum deviation from planarity of 0.0124 (2) Å. The dihedral angle between the two pyridine rings is 5.85 (2)°.
- Published
- 2007
30. Effect of Different Shape of Periodic Forces on Chaotic Oscillation in Brusselator Chemical System
- Author
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S. Guruparan, B Ravindran Durai Nayagam, V. Chinnathambi, and S. Jeyakumari
- Subjects
Control of chaos ,Period-doubling bifurcation ,Mathematical analysis ,Lyapunov exponent ,Bifurcation diagram ,Nonlinear Sciences::Chaotic Dynamics ,symbols.namesake ,Sine wave ,Brusselator ,Classical mechanics ,Quasiperiodic function ,symbols ,Nonlinear Sciences::Pattern Formation and Solitons ,Poincaré map ,Mathematics - Abstract
Bifurcations of periodic orbits and chaos in the Brusselator chemical reaction with different shape of external periodic forces are studied numerically. The external periodic forces considered are sine wave, square-wave, rectified sine wave, symmetric saw-tooth wave, asymmetric saw-tooth wave and modulus of sine wave. Period doubling bifurcations, chaos, reverse period doubling bifurcations, quasiperiodic bifurcations are found to occur due to the applied forces. Parametric regimes where suppression of chaos occurs are predicted. Numerical investigations including bifurcation diagram, maximal Lyapunov exponent, Poincare map, Phase portrait and time series plot are used to detect chaos, quasiperiodic and periodic orbits.
- Published
- 2015
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31. Octaakis(4-aminopyridine)-1κ4 N 1,2κ4 N 1-aqua-2κO-μ-carbonato-1:2κ3 O,O′:O′′-dinickel(II) dichloride pentahydrate
- Author
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Samuel Robinson Jebas, S. Alfred Cecil Raj, Hoong-Kun Fun, B. Ravindran Durai Nayagam, and A. Sinthiya
- Subjects
Metal-Organic Papers ,chemistry.chemical_compound ,Crystallography ,chemistry ,Atom ,Pyridine ,Carbonate ,General Materials Science ,General Chemistry ,Crystal structure ,Condensed Matter Physics ,Ion - Abstract
In the title compound, [Ni(2)(CO(3))(C(5)H(6)N(2))(8)(H(2)O)]Cl(2)·5H(2)O, one of the the Ni(II) ions is six-coordinated in a distorted octa-hedral geometry, with the equatorial plane defined by four pyridine N atoms from four amino-pyridine ligands, the axial positions being occupied by one water O and a carbonate O atom. The other Ni(II) ion is also six-coordinated, by four other pyridine N atoms from four other amino-pyridine ligands and two carbonate O atoms to complete a distorted octa-hedral geometry. In the crystal structure, mol-ecules are linked into an infinite three-dimensional network by O-H⋯O, N-H⋯Cl, N-H⋯O, O-H⋯N, C-H⋯O, C-H⋯N and C/N-H⋯π inter-actions involving the pyridine rings.
- Published
- 2008
32. 2,4,6-Tris(1-oxo-2-pyridylsulfanylmethyl)mesitylene methanol solvate
- Author
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Dieter Schollmeyer, B. Ravindran Durai Nayagam, Samuel Robinson Jebas, and C. Ravi Samuelraj
- Subjects
Tris ,Hydrogen bond ,General Chemistry ,Crystal structure ,Dihedral angle ,Condensed Matter Physics ,Ring (chemistry) ,Organic Papers ,Crystallography ,chemistry.chemical_compound ,chemistry ,Perpendicular ,General Materials Science ,Methanol ,Mesitylene - Abstract
In the title compound, C(27)H(27)N(3)O(3)S(3)·CH(4)O, the dihedral angles formed by the mesitylene ring with the three oxopyridyl rings are 89.6 (1), 75.5 (1) and 80.69 (1)°, indicating that all three are nearly perpendicular to the mesitylene ring. Intra-molecular C-H⋯S hydrogen bonds generate S(6) ring motifs. The crystal structure is stabilized by intra-molecular C-H⋯S and inter-molecular C-H⋯O hydrogen bonds and weak C-H⋯π inter-actions.
- Published
- 2008
33. 1-Benzyloxy-1H-benzotriazole
- Author
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Samuel Robinson Jebas, B. Ravindran Durai Nayagam, P. Selvarathy Grace, and Dieter Schollmeyer
- Subjects
Benzotriazole ,Crystallography ,Maximum deviation ,Stacking ,General Chemistry ,Dihedral angle ,Condensed Matter Physics ,Ring (chemistry) ,Bioinformatics ,Organic Papers ,Crystal ,chemistry.chemical_compound ,chemistry ,QD901-999 ,Alkane stereochemistry ,General Materials Science ,Benzene - Abstract
In the title compound, C13H11N3O, the dihedral angle between the benzotriazole ring system [maximum deviation = 0.027 (16) Å] and the benzene ring is 10.28 (9)°. The C—C—O—N bond adopts an anti conformation [torsion angle = −177.11 (16)°]. In the crystal, the molecules interact via weak C—H...π interactions and aromatic π–π stacking [centroid-to-centroid distance = 3.731 (12) Å].
- Published
- 2012
34. 2-(Mesitylmethylsulfanyl)pyridineN-oxide–18-crown-6 (2/1)
- Author
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B. Ravindran Durai Nayagam, Dieter Schollmeyer, Samuel Robinson Jebas, and J. Jebaraj Devadasan
- Subjects
chemistry.chemical_classification ,Hydrogen bond ,18-Crown-6 ,Pyridine-N-oxide ,Ether ,General Chemistry ,Dihedral angle ,Condensed Matter Physics ,Bioinformatics ,Organic Papers ,Planarity testing ,chemistry.chemical_compound ,Crystallography ,chemistry ,Pyridine ,General Materials Science ,Crown ether - Abstract
In the title compound, 2C(15)H(17)NOS·C(12)H(24)O(6), the asymmetric unit consists of one N-oxide derivative and one-half of the 18-crown-6 ether, which lies on an inversion centre. In the crown ether, the O-C-C-O torsion angles indicate a gauche conformation of the ethyl-eneoxy units, while the C-O-C-C torsion angles indicate planarity of these segments. In the N-oxide unit, the dihedral angle between the pyridine and benzene rings is 85.88 (12)°. The crystal packing is stabilized by weak C-H⋯O hydrogen bonds and C-H⋯π inter-actions.
- Published
- 2008
- Full Text
- View/download PDF
35. Synthesis, structural, multitargeted molecular docking analysis of anti-cancer, anti-tubercular, DNA interactions of benzotriazole based macrocyclic ligand.
- Author
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Pon Matheswari P, Ilavarasi Jeyamalar J, Iruthayaraj A, and Ravindran Durai Nayagam B
- Subjects
- Humans, Ligands, Molecular Structure, Structure-Activity Relationship, Macrocyclic Compounds chemistry, Macrocyclic Compounds pharmacology, Macrocyclic Compounds chemical synthesis, Microbial Sensitivity Tests, Dose-Response Relationship, Drug, Drug Screening Assays, Antitumor, Mycobacterium tuberculosis drug effects, Cell Proliferation drug effects, Anti-Bacterial Agents pharmacology, Anti-Bacterial Agents chemistry, Anti-Bacterial Agents chemical synthesis, Molecular Docking Simulation, Antineoplastic Agents pharmacology, Antineoplastic Agents chemistry, Antineoplastic Agents chemical synthesis, Triazoles chemistry, Triazoles pharmacology, Triazoles chemical synthesis, Antitubercular Agents pharmacology, Antitubercular Agents chemistry, Antitubercular Agents chemical synthesis, DNA chemistry, DNA metabolism
- Abstract
Biologically important macromolecule 1, 1', 3, 3' Bis - [2,3,5,6-Tetramethyl-p-phenylenebis(methylene)] dibenzotriazlinium dibromide hydrate (BTD) was synthesized and characterized using FT-IR, NMR and single-crystal XRD (SCXRD). SCXRD revealed that the compound was crystallized as a monoclinic system and associated through weak intermolecular interactions like H-bonding and π- π stacking interactions. These weak intermolecular interactions in BTD were studied using Crystal Explorer and Gaussian. The calculated energies for the Highest Occupied Molecular Orbital (HOMO) and the Lowest Unoccupied Molecular Orbital (LUMO) showed the stability and reactivity of the title compound. Molecular electrostatic potential (MEP) surface analysis was used to investigate the crystal's nucleophilic and electrophilic reactive sites. The molecular shape and intermolecular interactions in the crystal structure were determined using Hirshfeld surface analysis and fingerprint plots. Anticancer, anti-bacterial and DNA binding ability of BTD were investigated by experimental and theoretical techniques. The obtained results suggest that BTD possesses better anti-cancer, anti-bacterial and DNA binding abilities. The mode of action of antibiotic and anticancer approach was discussed. This provides promising therapeutic advantages for further development., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 Elsevier Inc. All rights reserved.)
- Published
- 2024
- Full Text
- View/download PDF
36. Synthesis, molecular docking, and in silico ADMET studies of 4-benzyl-1-(2,4,6-trimethyl-benzyl)-piperidine: Potential Inhibitor of SARS-CoV2.
- Author
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Nandini Asha R, Ravindran Durai Nayagam B, and Bhuvanesh N
- Subjects
- Adenosine Monophosphate analogs & derivatives, Adenosine Monophosphate chemistry, Adenosine Monophosphate metabolism, Alanine analogs & derivatives, Alanine chemistry, Alanine metabolism, Antiviral Agents chemical synthesis, Antiviral Agents chemistry, Binding Sites, COVID-19 pathology, COVID-19 virology, Crystallography, X-Ray, Density Functional Theory, Half-Life, Humans, Molecular Conformation, Molecular Docking Simulation, Piperidines chemical synthesis, Piperidines metabolism, SARS-CoV-2 isolation & purification, Spike Glycoprotein, Coronavirus metabolism, Viral Matrix Proteins antagonists & inhibitors, Viral Matrix Proteins metabolism, Antiviral Agents metabolism, Piperidines chemistry, SARS-CoV-2 metabolism, Spike Glycoprotein, Coronavirus antagonists & inhibitors
- Abstract
Nowadays, over 200 countries face a wellbeing emergency because of epidemiological disease COVID-19 caused by the SARS-CoV-2 virus. It will cause a very high effect on the world's economy and the worldwide health sector. The present work is an investigation of the newly synthesized 4-benzyl-1-(2,4,6-trimethyl-benzyl)-piperidine (M1BZP) molecule's inhibitory potential against important protein targets of SARS-CoV-2 using computational approaches. M1BZP crystallizes in monoclinic type with P1211 space group. For the title compound M1BZP, spectroscopic characterization like
1 H NMR,13 C NMR, FTIR, were carried out. The geometry of the compound had been optimized by the DFT method and its results were compared with the X-ray diffraction data. The calculated energies for the Highest Occupied Molecular Orbital (HOMO) and the Lowest Unoccupied Molecular Orbital (LUMO) showed the stability and reactivity of the title compound. Intermolecular interactions in the crystal network were determined using Hirshfeld surface analyses. The molecular electrostatic potential (MEP) picture was drawn using the same level of theory to visualize the chemical reactivity and charge distribution on the molecule. Molecular docking study performed for the synthesized compound revealed an efficient interaction with the COVID-19 protease and resulted in good activities. We hope the present study would help workers in the field to develop potential vaccines and therapeutics against the novel coronavirus. Virtual ADME studies were carried out as well and a relationship between biological, electronic, and physicochemical qualifications of the target compound was determined. Toxicity prediction by computational technique for the title compound was also carried out., (Copyright © 2021 Elsevier Inc. All rights reserved.)- Published
- 2021
- Full Text
- View/download PDF
37. 4-Aminopyridinium 4-aminobenzoate dihydrate and 4-aminopyridinium nicotinate.
- Author
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Jebas SR, Sinthiya A, Ravindran Durai Nayagam B, Schollmeyer D, and Raj SA
- Subjects
- Crystallography, X-Ray, Hydrogen Bonding, Models, Molecular, Molecular Structure, Niacin chemistry, Water, Niacin analogs & derivatives, Pyridinium Compounds chemistry
- Abstract
In the title compounds, 4-aminopyridinium 4-aminobenzoate dihydrate, C(7)H(6)NO(2)(-).C(5)H(7)N(2)(+).2H(2)O, (I), and 4-aminopyridinium nicotinate, C(5)H(7)N(2)(+).C(6)H(4)NO(2)(-), (II), the aromatic N atoms of the 4-aminopyridinium cations are protonated. In (I), the asymmetric unit is composed of two 4-aminopyridinium cations, two 4-aminobenzoate anions and four water molecules, and the compound crystallizes in a noncentrosymmetric space group. The two sets of independent molecules of (I) are related by a centre of symmetry which is not part of the space group. In (I), the protonated pyridinium ring H atoms are involved in bifurcated hydrogen bonding with carboxylate O atoms to form an R(1)(2)(4) ring motif. The water molecules link the ions to form a two-dimensional network along the (101) plane. In (II), an intramolecular bifurcated hydrogen bond generates an R(1)(2)(4) ring motif and inter-ion hydrogen bonding generates an R(4)(2)(16) ring motif. The packing of adduct (II) is consolidated via N-H...O and N-H...N hydrogen bonds to form a two-dimensional network along the (102) plane.
- Published
- 2009
- Full Text
- View/download PDF
38. Chlorido(dimethyl sulfoxide)(pyridine-2-thiol-ato N-oxide-κS,O)platinum(II).
- Author
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Ravindran Durai Nayagam B, Jebas SR, Selvarathy Grace P, and Schollmeyer D
- Abstract
The asymmetric unit of the title compound, [Pt(C(5)H(4)NOS)Cl(C(2)H(6)OS)], contains two independent complex mol-ecules having similar geometries. Each Pt(II) atom is four-coordinated in a distorted square-planar geometry by S and O atoms of one pyridine N-oxide ligand, the S atom of one dimethyl sulfoxide mol-ecule and one terminal Cl(-) ion. The mol-ecules are linked into a three-dimensional framework by C-H⋯O and C-H⋯Cl hydrogen bonds.
- Published
- 2008
- Full Text
- View/download PDF
39. 2,4,6-Tris(1-oxo-2-pyridylsulfanylmeth-yl)mesitylene methanol solvate.
- Author
-
Ravindran Durai Nayagam B, Jebas SR, Ravi Samuelraj C, and Schollmeyer D
- Abstract
In the title compound, C(27)H(27)N(3)O(3)S(3)·CH(4)O, the dihedral angles formed by the mesitylene ring with the three oxopyridyl rings are 89.6 (1), 75.5 (1) and 80.69 (1)°, indicating that all three are nearly perpendicular to the mesitylene ring. Intra-molecular C-H⋯S hydrogen bonds generate S(6) ring motifs. The crystal structure is stabilized by intra-molecular C-H⋯S and inter-molecular C-H⋯O hydrogen bonds and weak C-H⋯π inter-actions.
- Published
- 2008
- Full Text
- View/download PDF
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