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6. Additional file 1 of Biological knowledge-slanted random forest approach for the classification of calcified aortic valve stenosis

Author

Cantor, Erika, Salas, Rodrigo, Rosas, Harvey, and Guauque-Olarte, Sandra

Abstract

Additional file 1: Table S1. Top-20 most frequent genes of Knowledge-slanted RF and conventional RF with three categories. Table S2. Top-20 most frequent genes of Knowledge-slanted RF and conventional RF with two categories. Table S3. Comparison of the expression levels of the Top-20 most frequent genes identified with knowledge-slanted RF between BAV, TAV and control cases. Table S4. Comparison of the expression levels of the Top-20 most frequent genes identified with conventional RF between BAV, TAV and control cases. Fig. S1. Accuracy performance of knowledge-slanted RF versus conventional RF when the 955 seed nodes of RWR are selected randomly.

Published
2021
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8. Altered DNA Methylation of Long Noncoding RNA H19 in Calcific Aortic Valve Disease Promotes Mineralization by Silencing NOTCH1

Author

Hadji, Fayez, primary, Boulanger, Marie-Chloé, additional, Guay, Simon-Pierre, additional, Gaudreault, Nathalie, additional, Amellah, Soumiya, additional, Mkannez, Guada, additional, Bouchareb, Rihab, additional, Marchand, Joël Tremblay, additional, Nsaibia, Mohamed Jalloul, additional, Guauque-Olarte, Sandra, additional, Pibarot, Philippe, additional, Bouchard, Luigi, additional, Bossé, Yohan, additional, and Mathieu, Patrick, additional

Published
2016
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10. RNA expression profile of calcified bicuspid, tricuspid, and normal human aortic valves by RNA sequencing

Author

Guauque-Olarte, Sandra, primary, Droit, Arnaud, additional, Tremblay-Marchand, Joël, additional, Gaudreault, Nathalie, additional, Kalavrouziotis, Dimitri, additional, Dagenais, Francois, additional, Seidman, Jonathan G., additional, Body, Simon C., additional, Pibarot, Philippe, additional, Mathieu, Patrick, additional, and Bossé, Yohan, additional

Published
2016
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11. Razlike u prevalenciji karijesa i u rizičnim čimbenicima između privilegirane i neprivilegirane djece u Kolumbiji.

Author

Cerón-Bastidas, Ximena Andrea, Suárez-Molina, Andrés, and Guauque-Olarte, Sandra

Subjects
DENTAL caries, DENTAL care utilization, POLITICAL systems, STUDY skills, SCHOOLS
Abstract

Copyright of Acta Stomatologica Croatica is the property of Acta Stomatologica Croatica and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)

Published
2018
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12. Abstract 16338: Dna Hypomethylation in Long Non-coding Rna Promoter During Calcific Aortic Valve Stenosis: Implication for the Notch Pathway

Author

Hadji, Fayez, primary, Boulanger, Marie-Chloé, additional, Lavoie-Charland, Émilie, additional, Gaudreault, Nathalie, additional, Guauque-Olarte, Sandra, additional, Bouchareb, Rihab, additional, Nsaibia, Mohamed, additional, Bouchard, Luigi, additional, Bossé, Yohan, additional, and Mathieu, Patrick, additional

Published
2015
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13. DIVERSIDAD Y ESTRUCTURA GENÉTICA DE TRESPOBLACIONES AFRODESCENDIENTES DEL SUROCCIDENTECOLOMBIANO A PARTIR DE 8 STR’S

Author

GUAUQUE-OLARTE, SANDRA, FUENTES-PARDO, ÁNGELA PATRICIA, CÁRDENAS-HENAO, HÉIBER, and BARRETO, GUILLERMO

Subjects
diversidad genética, STR’s, afrodescendents, genetic diversity, colombian southwest, afrodescendientes, suroccidente colombiano
Abstract

Con el objetivo de estimar la diversidad, la estructura y el flujo génico de tres poblaciones afrodescendientes del suroccidente colombiano (Buenaventura, Mulaló y Tumaco), se analizaron los alelos revelados por ocho STR’s autosómicos en 78 indi-viduos no relacionados, mediante amplificación por PCR y comparación con escaleras alélicas de cada sistema corridas en geles de poliacrilamida al 8%. Los resultados se compararon con las poblaciones amerindias Awa-Kuaikier y Coyaima, y las mestizas del Valle del Cauca y de Cauca. Se encontró que las muestras afrodescendientes y amerindias fueron moderadamente diversas (h entre 0,768±0,414 y 0,796±0,424), mientras que las mestizas mostraron índices mayores (>0,803), lo que puede ser consecuencia del mestizaje con amerindios, el cual puede explicar la alta endogamia observada para éstas. El AMOVA exhibió estructuración moderada entre las poblaciones afrodescendientes (FST= 0,098; p0.803), which is probably caused by mixing with amerindians, that also can explain the high endogamy seen in mixed populations. The AMOVA exhibited moderate genetic structure between the afrodescendent populations (FST= 0.098; p

Published
2010

14. Abstract 16680: Lipoprotein(a) and Progression Rate of Aortic Valve Stenosis - A Pooled-Analysis of Two Prospective Studies

Author

Capoulade, Romain, primary, Tastet, Lionel, additional, Mahmut, Ablajan, additional, Chan, Kwan L, additional, Guauque-Olarte, Sandra, additional, Arsenault, Marie, additional, Bedard, Elisabeth, additional, Arsenault, Benoit J, additional, Gaudreault, Nathalie, additional, Dumesnil, Jean G, additional, Teo, Koon K, additional, Tam, James W, additional, Després, Jean-Pierre, additional, Mathieu, Patrick, additional, Bossé, Yohan, additional, and Pibarot, Philippe, additional

Published
2014
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15. Evaluation of Links Between High-Density Lipoprotein Genetics, Functionality, and Aortic Valve Stenosis Risk in Humans

Author

Arsenault, Benoit J., primary, Dubé, Marie-Pierre, additional, Brodeur, Mathieu R., additional, de Oliveira Moraes, Adriana Benjamin, additional, Lavoie, Véronique, additional, Kernaleguen, Anne-Elen, additional, Guauque-Olarte, Sandra, additional, Mathieu, Patrick, additional, Pibarot, Philippe, additional, Messika-Zeitoun, David, additional, Bossé, Yohan, additional, Rhainds, David, additional, Rhéaume, Éric, additional, and Tardif, Jean-Claude, additional

Published
2014
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16. Altered DNA Methylation of Long Noncoding RNA H19in Calcific Aortic Valve Disease Promotes Mineralization by Silencing NOTCH1

Author

Hadji, Fayez, Boulanger, Marie-Chloé, Guay, Simon-Pierre, Gaudreault, Nathalie, Amellah, Soumiya, Mkannez, Guada, Bouchareb, Rihab, Marchand, Joël Tremblay, Nsaibia, Mohamed Jalloul, Guauque-Olarte, Sandra, Pibarot, Philippe, Bouchard, Luigi, Bossé, Yohan, and Mathieu, Patrick

Abstract

Supplemental Digital Content is available in the text.

Published
2016
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18. IDENTIFICACIÓN DE MICROORGANISMOS PATÓGENOS ORALES EN SANGRE PERIFÉRICA DE PACIENTES CON Y SIN ENFERMEDAD CORONARIA.

Author

Guauque-Olarte, Sandra

Abstract

Se hipotetiza que puede ocurrir la transferencia de microrganismos patógenos orales a la arteria coronaria a través del torrente sanguíneo. El objetivo de este estudio fue comparar los microorganismos patógenos orales en sangre periférica de pacientes con y sin enfermedad coronaria. Las secuencias de RNA-Seq provenían de sangre periférica de individuos con (casos = 8) y sin (controles = 8) calcificación arterial. Después del control de calidad, el mapeo de las secuencias se hizo con Hisat2 y un genoma humano de referencia. Se utilizó el programa Kraken para determinar si las secuencias no mapeadas pertenecían a taxa de bacterias. Los índices ecológicos se calcularon con Vegan. El índice de diversidad de Shannon fue menor en casos (3.8-4.8) que en controles (3.3-4.7). La riqueza de especies estuvo entre 817.8-1414.7 en casos y 314.0-826.0 en controles. El promedio de especies fue de 1437 en casos y 1297 en controles. Los periodontopatógenos Porphyromonas gingivalis, Tannerella forsytia, Prevotella dentalis y Aggregatibacter actinomycetemcomitans se encontraron en frecuencias similares en casos y controles. Otras especies de microorganismos patógenos fueron más comunes en los casos. Este estudio generará nuevo conocimiento que permitirá profundizar en el entendimiento de la relación entre estas periodontitis y enfermedad coronaria. [ABSTRACT FROM AUTHOR]

Published
2019

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