372 results on '"Lepper P"'
Search Results
2. Data Models of German Lute Tablature With TScore
- Author
-
Lepper, Markus and Widemann, Baltasar Trancón
- Subjects
Computer Science - Programming Languages - Abstract
TScore is both an abstract formalism and its computer implementation to construct models of arbitrary kinds of time-related data. It is a research project about the semantics of musical notation, applying the method of computer-aided re-modelling to diverse formalisms and semantics of time-related data. Here we present the application to German tablature notation. While the current implemention is merely a proof of concept, the lean architecture of TScore allows easy adaptation and extension.
- Published
- 2024
3. Distinct Patterns of Blood Cytokines Beyond a Cytokine Storm Predict Mortality in COVID-19
- Author
-
Herr C, Mang S, Mozafari B, Guenther K, Speer T, Seibert M, Srikakulam SK, Beisswenger C, Ritzmann F, Keller A, Mueller R, Smola S, Eisinger D, Zemlin M, Danziger G, Volk T, Hoersch S, Krawczyk M, Lammert F, Adams T, Wagenpfeil G, Kindermann M, Marcu C, Ataya ZWD, Mittag M, Schwarzkopf K, Custodis F, Grandt D, Schaefer H, Eltges K, Lepper PM, and Bals R
- Subjects
biomarker ,inflammation ,sars-cov2 ,Pathology ,RB1-214 ,Therapeutics. Pharmacology ,RM1-950 - Abstract
Christian Herr,1 Sebastian Mang,1 Bahareh Mozafari,1 Katharina Guenther,1 Thimoteus Speer,2 Martina Seibert,1 Sanjay Kumar Srikakulam,1 Christoph Beisswenger,1 Felix Ritzmann,1 Andreas Keller,3 Rolf Mueller,4 Sigrun Smola,5 Dominic Eisinger,6 Michael Zemlin,7 Guy Danziger,1 Thomas Volk,8 Sabrina Hoersch,8 Marcin Krawczyk,9 Frank Lammert,9 Thomas Adams,9 Gudrun Wagenpfeil,10 Michael Kindermann,11 Constantin Marcu,11 Zuhair Wolf Dietrich Ataya,12 Marc Mittag,13 Konrad Schwarzkopf,13 Florian Custodis,13 Daniel Grandt,13 Harald Schaefer,14 Kai Eltges,14 Philipp M Lepper,1 Robert Bals1 On behalf of the CORSAAR Study Group1Department of Internal Medicine V - Pulmonology, Allergology and Critical Care Medicine, Saarland University, Homburg, 66421, Germany; 2Department of Internal Medicine IV - Nephrology and Hypertension & Translational Cardio-Renal Medicine, Saarland University, Homburg, 66421, Germany; 3Clinical Bioinformatics, Saarland University, Homburg, 66421, Germany; 4Helmholtz-Institute for Pharmaceutical Science Saarland, Saarbrücken, 66123, Germany; 5Institute for Virology, Saarland University, Homburg, 66421, Germany; 6Myriad RBM Inc., Austin, TX, 78759, USA; 7Department of General Pediatrics and Neonatology, Saarland University, Homburg, 66421, Germany; 8Department of Anesthesiology, Intensive Care Medicine and Pain Therapy, Saarland University, Homburg, 66421, Germany; 9Department of Internal Medicine II - Gastroenterology, Saarland University, Homburg, 66421, Germany; 10Institute for Medical Biometry, Epidemiology and Medical Informatics, Saarland University, Homburg, 66421, Germany; 11Department of Internal Medicine, Cardiology and Intensive Care Medicine, Caritas Hospital St. Theresia Saarbrücken, Saarbrücken, 66113, Germany; 12Department of Gastroenterology, Internal and Intensive Care Medicine, Caritas Hospital St. Josef Saarbrücken, Saarbrücken, 66125, Germany; 13Department of Anesthesiology, Gastroenterology and Intensive Care Medicine, Saarbrücken Hospital, Saarbrücken, 66119, Germany; 14Department of Internal Medicine and Pulmonology, SHG-Hospital Völklingen, Saarbrücken, 66333, GermanyCorrespondence: Robert BalsDepartment of Internal Medicine V - Pulmonology, Allergology and Critical Care Medicine, Saarland University, Homburg, 66421, GermanyTel +49 6841 16 15051Email robert.bals@uks.euBackground: COVID-19 comprises several severity stages ranging from oligosymptomatic disease to multi-organ failure and fatal outcomes. The mechanisms why COVID-19 is a mild disease in some patients and progresses to a severe multi-organ and often fatal disease with respiratory failure are not known. Biomarkers that predict the course of disease are urgently needed. The aim of this study was to evaluate a large spectrum of established laboratory measurements.Patients and Methods: Patients from the prospective PULMPOHOM and CORSAAR studies were recruited and comprised 35 patients with COVID-19, 23 with conventional pneumonia, and 28 control patients undergoing elective non-pulmonary surgery. Venous blood was used to measure the serum concentrations of 79 proteins by Luminex multiplex immunoassay technology. Distribution of biomarkers between groups and association with disease severity and outcomes were analyzed.Results: The biomarker profiles between the three groups differed significantly with elevation of specific proteins specific for the respective conditions. Several biomarkers correlated significantly with disease severity and death. Uniform manifold approximation and projection (UMAP) analysis revealed a significant separation of the three disease groups and separated between survivors and deceased patients. Different models were developed to predict mortality based on the baseline measurements of several protein markers. A score combining IL-1ra, IL-8, IL-10, MCP-1, SCF and CA-9 was associated with significantly higher mortality (AUC 0.929).Discussion: Several newly identified blood markers were significantly increased in patients with severe COVID-19 (AAT, EN-RAGE, myoglobin, SAP, TIMP-1, vWF, decorin) or in patients that died (IL-1ra, IL-8, IL-10, MCP-1, SCF, CA-9). The use of established assay technologies allows for rapid translation into clinical practice.Keywords: biomarker, inflammation, SARS-CoV2
- Published
- 2021
4. Microbiological airway colonization in COPD patients with severe emphysema undergoing endoscopic lung volume reduction
- Author
-
Trudzinski FC, Seiler F, Wilkens H, Metz C, Kamp A, Bals R, Gärtner B, Lepper PM, and Becker SL
- Subjects
chronic obstructive pulmonary disease (COPD) ,endoscopic lung volume reduction (eLVR) ,emphysema ,Haemophilus influenzae ,Pseudomonas aeruginosa ,resistance ,Diseases of the respiratory system ,RC705-779 - Abstract
Franziska C Trudzinski,1 Frederik Seiler,1 Heinrike Wilkens,1 Carlos Metz,1 Annegret Kamp,1 Robert Bals,1 Barbara Gärtner,2 Philipp M Lepper,1 Sören L Becker2–4 1Department of Internal Medicine V – Pneumology, Allergology and Critical Care Medicine, ECLS Center Saar, University Medical Center Saarland and Saarland University, 2Institute of Medical Microbiology and Hygiene, Saarland University, Homburg/Saar, Germany; 3Swiss Tropical and Public Health Institute, 4University of Basel, Basel, Switzerland Background: Endoscopic lung volume reduction (eLVR) is a therapeutic option for selected patients with COPD and severe emphysema. Infectious exacerbations are serious events in these vulnerable patients; hence, prophylactic antibiotics are often prescribed postinterventionally. However, data on the microbiological airway colonization at the time of eLVR are scarce, and there are no evidence-based recommendations regarding a rational antibiotic regimen.Objective: The aim of this study was to perform a clinical and microbiological analysis of COPD patients with advanced emphysema undergoing eLVR with endobronchial valves at a single German University hospital, 2012–2017.Patients and methods: Bronchial aspirates were obtained prior to eLVR and sent for microbiological analysis. Antimicrobial susceptibility testing of bacterial isolates was performed, and pathogen colonization was retrospectively compared with clinical parameters.Results: At least one potential pathogen was found in 47% (30/64) of patients. Overall, Gram-negative bacteria constituted the most frequently detected pathogens. The single most prevalent species were Haemophilus influenzae (9%), Streptococcus pneumoniae (6%), and Staphylococcus aureus (6%). No multidrug resistance was observed, and Pseudomonas aeruginosa occurred in
- Published
- 2017
5. Deterioration of quality of life is associated with the exacerbation frequency in individuals with alpha-1-antitrypsin deficiency – analysis from the German Registry
- Author
-
Bernhard N, Lepper PM, Vogelmeier C, Seibert M, Wagenpfeil S, Bals R, and Fähndrich S
- Subjects
SGRQ ,quality of life ,AATD ,alpha-1-antitrypsin deficiency ,COPD ,exacerbations ,emphysema ,FEV1 ,Diseases of the respiratory system ,RC705-779 - Abstract
Nikolas Bernhard,1 Philipp M Lepper,1 Claus Vogelmeier,2 Martina Seibert,1 Stefan Wagenpfeil,3 Robert Bals,1 Sebastian Fähndrich1 1Department of Internal Medicine V – Pulmonology, Allergology, Intensive Care Medicine, Saarland University Hospital, Homburg, 2Department of Medicine, Pulmonary and Critical Care Medicine, University Medical Center Giessen and Marburg, Philipps-University Marburg, Member of the German Center for Lung Research (DZL), 3Faculty of Medicine, Institute of Medical Biometry, Epidemiology and Medical Informatics, Saarland University, Campus Homburg, Germany Background: Alpha-1-antitrypsin deficiency (AATD) is a rare hereditary disease that is associated with a higher risk to develop chronic obstructive pulmonary disease and liver cirrhosis. Previous cross-sectional studies on AATD individuals have shown a relationship between worse St George’s Respiratory Questionnaire (SGRQ) scores and elevated exacerbation rate or high cigarette consumption. There is a lack of longitudinal data on the relationship between the exacerbation rate and worsening of SGRQ during disease. The aim of this study was to provide not only cross-sectional data but also information about the deterioration in quality of life over a follow-up period up to 7 years (median follow-up period of 3.33 years).Methods: We investigated questionnaire-based data of the German AATD registry concerning the relationship between SGRQ and exacerbation frequency, smoking history, forced expiratory volume in 1 second (FEV1) and carbon monoxide diffusion capacity (DLCO) first in cross-sectional analysis and later in longitudinal analysis.Results: Eight hundred sixty-eight individuals with protease inhibitor ZZ (PiZZ) genotype with an average age of 52.6±12.8 years had an SGRQ score of 45.7±20.6. SGRQ significantly correlated with the exacerbation frequency within the last 2 years (r=0.464; P
- Published
- 2017
6. Lineage tracing of nuclei in skeletal myofibers uncovers distinct transcripts and interplay between myonuclear populations
- Author
-
Sun, Chengyi, Swoboda, Casey O., Morales, Fabian Montecino, Calvo, Cristofer, Petrany, Michael J., Parameswaran, Sreeja, VonHandorf, Andrew, Weirauch, Matthew T., Lepper, Christoph, and Millay, Douglas P.
- Published
- 2024
- Full Text
- View/download PDF
7. Extracorporeal membrane oxygenation for tuberculosis-related acute respiratory distress syndrome: An international multicentre retrospective cohort study
- Author
-
Ait Hssain, Ali, Petit, Matthieu, Wiest, Clemens, Simon, Laura, Al-Fares, Abdulrahman A., Hany, Ahmed, Garcia-Gomez, Dafna I., Besa, Santiago, Nseir, Saad, Guervilly, Christophe, Alqassem, Wael, Lesouhaitier, Mathieu, Chelaru, Adrian, Sin, Simon WC, Roncon-Albuquerque, Jr., Roberto, Giani, Marco, Lepper, Philipp M., Lavillegrand, Jean-Rémi, Park, Sunghoon, Schellongowski, Peter, Fawzy Hassan, Ibrahim, Combes, Alain, Sonneville, Romain, and Schmidt, Matthieu
- Published
- 2024
- Full Text
- View/download PDF
8. Study protocol for a randomized controlled trial of the Parent–Child Assistance Program: a case management and home visiting program for people using substances during pregnancy
- Author
-
Maher, Erin J., Stoner, Susan A., Gerlinger, Julie, Ferraro, A. C., and Lepper-Pappan, Heather
- Published
- 2024
- Full Text
- View/download PDF
9. A mud budget of the Wadden Sea and its implications for sediment management
- Author
-
Colina Alonso, Ana, van Maren, Dirk Sebastiaan, Oost, Albert Peter, Esselink, Peter, Lepper, Robert, Kösters, Frank, Bartholdy, Jesper, Bijleveld, Allert Imre, and Wang, Zheng Bing
- Published
- 2024
- Full Text
- View/download PDF
10. Two single lung transplantations from one donor: lung twinning in the LAS era
- Author
-
Langer, Frank, Lepper, Philipp M., Weingard, Bettina, Aliyev, Parviz, Bals, Robert, and Wilkens, Heinrike
- Published
- 2024
- Full Text
- View/download PDF
11. YTHDF2 governs muscle size through a targeted modulation of proteostasis
- Author
-
Gilbert, Christopher J., Rabolli, Charles P., Golubeva, Volha A., Sattler, Kristina M., Wang, Meifang, Ketabforoush, Arsh, Arnold, W. David, Lepper, Christoph, and Accornero, Federica
- Published
- 2024
- Full Text
- View/download PDF
12. Lineage tracing of nuclei in skeletal myofibers uncovers distinct transcripts and interplay between myonuclear populations
- Author
-
Chengyi Sun, Casey O. Swoboda, Fabian Montecino Morales, Cristofer Calvo, Michael J. Petrany, Sreeja Parameswaran, Andrew VonHandorf, Matthew T. Weirauch, Christoph Lepper, and Douglas P. Millay
- Subjects
Science - Abstract
Abstract Multinucleated skeletal muscle cells need to acquire additional nuclei through fusion with activated skeletal muscle stem cells when responding to both developmental and adaptive growth stimuli. A fundamental question in skeletal muscle biology has been the reason underlying this need for new nuclei in cells that already harbor hundreds of nuclei. Here we utilize nuclear RNA-sequencing approaches and develop a lineage tracing strategy capable of defining the transcriptional state of recently fused nuclei and distinguishing this state from that of pre-existing nuclei. Our findings reveal the presence of conserved markers of newly fused nuclei both during development and after a hypertrophic stimulus in the adult. However, newly fused nuclei also exhibit divergent gene expression that is determined by the myogenic environment to which they fuse. Moreover, accrual of new nuclei through fusion is required for nuclei already resident in adult myofibers to mount a normal transcriptional response to a load-inducing stimulus. We propose a model of mutual regulation in the control of skeletal muscle development and adaptations, where newly fused and pre-existing myonuclear populations influence each other to maintain optimal functional growth.
- Published
- 2024
- Full Text
- View/download PDF
13. A Local Iterative Approach for the Extraction of 2D Manifolds from Strongly Curved and Folded Thin-Layer Structures
- Author
-
Klenert, Nicolas, Lepper, Verena, and Baum, Daniel
- Subjects
Computer Science - Computer Vision and Pattern Recognition - Abstract
Ridge surfaces represent important features for the analysis of 3-dimensional (3D) datasets in diverse applications and are often derived from varying underlying data including flow fields, geological fault data, and point data, but they can also be present in the original scalar images acquired using a plethora of imaging techniques. Our work is motivated by the analysis of image data acquired using micro-computed tomography (Micro-CT) of ancient, rolled and folded thin-layer structures such as papyrus, parchment, and paper as well as silver and lead sheets. From these documents we know that they are 2-dimensional (2D) in nature. Hence, we are particularly interested in reconstructing 2D manifolds that approximate the document's structure. The image data from which we want to reconstruct the 2D manifolds are often very noisy and represent folded, densely-layered structures with many artifacts, such as ruptures or layer splitting and merging. Previous ridge-surface extraction methods fail to extract the desired 2D manifold for such challenging data. We have therefore developed a novel method to extract 2D manifolds. The proposed method uses a local fast marching scheme in combination with a separation of the region covered by fast marching into two sub-regions. The 2D manifold of interest is then extracted as the surface separating the two sub-regions. The local scheme can be applied for both automatic propagation as well as interactive analysis. We demonstrate the applicability and robustness of our method on both artificial data as well as real-world data including folded silver and papyrus sheets., Comment: 16 pages, 21 figures, to be published in IEEE Transactions on Visualization and Computer Graphics
- Published
- 2023
14. A Theory of Conversion Relations for Prefixed Units of Measure
- Author
-
Widemann, Baltasar Trancón y and Lepper, Markus
- Subjects
Computer Science - Programming Languages ,Computer Science - Discrete Mathematics - Abstract
Units of measure with prefixes and conversion rules are given a formal semantic model in terms of categorial group theory. Basic structures and both natural and contingent semantic operations are defined. Conversion rules are represented as a class of ternary relations with both group-like and category-like properties. A hierarchy of subclasses is explored, each satisfying stronger useful algebraic properties than the preceding, culminating in a direct efficient conversion-by-rewriting algorithm.
- Published
- 2022
15. Using water‐landing, fixed‐wing UAVs and computer vision to assess seabird nutrient subsidy effects on sharks and rays
- Author
-
Melissa Schiele, J. Marcus Rowcliffe, Ben Clark, Paul Lepper, and Tom B. Letessier
- Subjects
Computer vision ,distribution ,invasive ,sea glitter ,sharks ,UAV ,Technology ,Ecology ,QH540-549.5 - Abstract
Abstract Bird colonies on islands sustain elevated productivity and biomass on adjacent reefs, through nutrient subsidies. However, the implications of this localized enhancement on higher and often more mobile trophic levels (such as sharks and rays) are unclear, as spatial trends in mobile fauna are often poorly captured by traditional underwater visual surveys. Here, we explore whether the presence of seabird colonies is associated with enhanced abundances of sharks and rays on adjacent coral reefs. We used a novel long‐range water‐landing fixed‐wing unoccupied aerial vehicle (UAV) to survey the distribution and density of sharks, rays and any additional megafauna, on and around tropical coral islands (n = 14) in the Chagos Archipelago Marine Protected Area. We developed a computer‐vision algorithm to distinguish greenery (trees and shrubs), sand and sea glitter from visible ocean to yield accurate marine megafauna density estimation. We detected elevated seabird densities over rat‐free islands, with the commonest species, sooty tern, reaching densities of 932 ± 199 per km−2 while none were observed over former coconut plantation islands. Elasmobranch density around rat‐free islands with seabird colonies was 6.7 times higher than around islands without seabird colonies (1.3 ± 0.63 vs. 0.2 ± SE 0.1 per km2). Our results are evidence that shark and ray distribution is sensitive to natural and localized nutrient subsidies. Correcting for non‐sampled regions of images increased estimated elasmobranch density by 14%, and our openly accessible computer vision algorithm makes this correction easy to implement to generate shark and ray and other wildlife densities from any aerial imagery. The water‐landing fixed‐wing long‐range UAV technology used in this study may provide cost effective monitoring opportunities in remote ocean locations.
- Published
- 2024
- Full Text
- View/download PDF
16. Exploring the tidal response to bathymetry evolution and present-day sea level rise in a channel–shoal environment
- Author
-
R. Lepper, L. Jänicke, I. Hache, C. Jordan, and F. Kösters
- Subjects
Geography. Anthropology. Recreation ,Environmental sciences ,GE1-350 - Abstract
Intertidal flats and salt marshes in channel–shoal environments are at severe risk of drowning under sea level rise (SLR) ultimately ceasing their function of coastal defense. Earlier studies indicated that these environments can be resilient against moderate SLR as their mean height is believed to correlate with tidal amplitude and mean sea level. Recent morphological analyses in the German Wadden Sea on the northwestern European continental shelf contradicted this assumption as mean tidal flat accretion surpassed relative SLR, indicating that nonlinear feedback between SLR, coastal morphodynamics, and tidal dynamics played a role. We explored this relationship in the German Wadden Sea's channel–shoal environment by revisiting the sensitivity of tidal dynamics to observed SLR and coastal bathymetry evolution over one nodal cycle (1997 to 2015) with a numerical model. We found a proportional response of tidal high and low water to SLR when the bathymetry was kept constant. In contrast, coastal bathymetry evolution caused a spatially varying hydrodynamic reaction with both increases and decreases in patterns of tidal characteristics within a few kilometers. An explorative assessment of potential mechanisms suggested that energy dissipation declined near the coast, which we related to a decreasing tidal prism and declining tidal energy import. Our study stresses the fact that an accurate representation of coastal morphology in hindcasts, nowcasts, and ensembles for bathymetry evolution to assess the impact of SLR is needed when using numerical models.
- Published
- 2024
- Full Text
- View/download PDF
17. Study protocol for a randomized controlled trial of the Parent–Child Assistance Program: a case management and home visiting program for people using substances during pregnancy
- Author
-
Erin J. Maher, Susan A. Stoner, Julie Gerlinger, A. C. Ferraro, and Heather Lepper-Pappan
- Subjects
Pregnancy ,Early childhood ,Home visiting ,Case management ,Substance use disorders ,Randomized controlled trial ,Medicine (General) ,R5-920 - Abstract
Abstract Background Perinatal substance use can have significant adverse effects on maternal and child health and family stability. Few interventions are specifically designed to address this significant public health problem. The Parent–Child Assistance Program (PCAP) is a 3-year case management and home-visiting intervention that seeks to help birthing persons with at-risk substance use during pregnancy to achieve and maintain substance use disorder recovery and avoid exposing future children to substances prenatally. At-risk refers to a level of substance use that creates problems in the individuals’ lives or puts them or their children at risk of harm either prenatally or postnatally. Although the program has consistently shown substantial pre- to post-intervention improvements in its participants, PCAP remains to be tested with a rigorous randomized controlled trial (RCT). This study protocol describes a randomized controlled trial that aims to examine the effectiveness of the intervention compared to services as usual in affecting primary outcomes related to substance use and family planning. Secondary outcomes will concern connection to recovery support services and family preservation. Methods Using an intent-to-treat design, the study will recruit from two metro areas in Oklahoma and enroll 200 birthing individuals who are pregnant or up to 24 months postpartum with at-risk substance use during their current or most recent pregnancy. Participants will be randomly assigned, stratified by location, to receive either PCAP or services as usual for 3 years. Participants in the PCAP condition will meet with their case manager approximately biweekly over the course of the intervention period, in their local communities or in their own homes whenever possible. Case managers will assist with goal setting and provide practical assistance in support of participants’ goals. Primary and secondary outcomes will be assessed at baseline and 12, 24, and 36 months post-baseline using the Addiction Severity Index interview and a self-administered survey. Discussion Results from this trial will help to gauge the effectiveness of PCAP in improving parent and child well-being. Results will be reviewed by federal clearinghouses on home-visiting and foster care prevention to determine the strength of evidence of effectiveness with implications for federal financing of this program model at the state level. Trial registration ClinicalTrials.gov NCT05534568. Registered on 6/8/2022.
- Published
- 2024
- Full Text
- View/download PDF
18. The E3 ubiquitin ligase Nedd4L preserves skeletal muscle stem cell quiescence by inhibiting their activation
- Author
-
Darren M. Blackburn, Korin Sahinyan, Aldo Hernández-Corchado, Felicia Lazure, Vincent Richard, Laura Raco, Gabrielle Perron, René P. Zahedi, Christoph H. Borchers, Christoph Lepper, Hiroshi Kawabe, Arezu Jahani-Asl, Hamed S. Najafabadi, and Vahab D. Soleimani
- Subjects
natural sciences ,biological sciences ,biochemistry ,cell biology ,stem cells research ,Science - Abstract
Summary: Adult stem cells play a critical role in tissue repair and maintenance. In tissues with slow turnover, including skeletal muscle, these cells are maintained in a mitotically quiescent state yet remain poised to re-enter the cell cycle to replenish themselves and regenerate the tissue. Using a panomics approach we show that the PAX7/NEDD4L axis acts against muscle stem cell activation in homeostatic skeletal muscle. Our findings suggest that PAX7 transcriptionally activates the E3 ubiquitin ligase Nedd4L and that the conditional genetic deletion of Nedd4L impairs muscle stem cell quiescence, with an upregulation of cell cycle and myogenic differentiation genes. Loss of Nedd4L in muscle stem cells results in the expression of doublecortin (DCX), which is exclusively expressed during their in vivo activation. Together, these data establish that the ubiquitin proteasome system, mediated by Nedd4L, is a key contributor to the muscle stem cell quiescent state in adult mice.
- Published
- 2024
- Full Text
- View/download PDF
19. A mud budget of the Wadden Sea and its implications for sediment management
- Author
-
Ana Colina Alonso, Dirk Sebastiaan van Maren, Albert Peter Oost, Peter Esselink, Robert Lepper, Frank Kösters, Jesper Bartholdy, Allert Imre Bijleveld, and Zheng Bing Wang
- Subjects
Geology ,QE1-996.5 ,Environmental sciences ,GE1-350 - Abstract
Abstract The world’s coasts and deltas are progressively threatened by climate change and human activities. The degree at which coastlines can adapt to these changes strongly depends on the sediment availability. The availability of muddy sediments is however poorly known. This study aims at developing a mud budget for the world’s largest system of uninterrupted tidal flats: the Wadden Sea. The resulting mud budget is nearly closed: ~ 12 million ton/year enters the system on its western end, ~ 1.5 million ton/year is added by local rivers, while ~ 12 million ton annually deposits or is extracted by anthropogenic activities. A mud deficit already exists in the downdrift areas, which will only become more pronounced with increased sea level rise rates. Mud is thus a finite resource similar to sand, and should be treated as such in sediment management strategies. Resolving future challenges will therefore require a cross-border perspective on sediment management.
- Published
- 2024
- Full Text
- View/download PDF
20. Two single lung transplantations from one donor: lung twinning in the LAS era
- Author
-
Frank Langer, Philipp M. Lepper, Bettina Weingard, Parviz Aliyev, Robert Bals, and Heinrike Wilkens
- Subjects
Lung transplantation ,Single lung transplantation ,Lung twinning ,Diseases of the respiratory system ,RC705-779 - Abstract
Abstract Objectives The implementation of the Lung Allocation Score (LAS) in the Eurotransplant international collaborative framework decreased waiting list mortality, but organ shortage remains a significant problem. Transplantation of two single lungs from one donor into two recipients (lung twinning) may decrease waiting list mortality. We sought to analyze if this strategy can lead to an acceptable intermediate-term outcome. Methods Since the LAS-implementation we performed 32 paired single-lung transplantations from 16 postmortal donors. Data and outcome were analyzed retrospectively comparing recipients receiving the first lung (first twins) with recipients receiving the second lung (second twins), left versus right transplantation and restrictive versus obstructive disease. Results Survival at one year was 81% and 54% at five years. Veno-venous ECMO had been successfully used as bridge-to-transplant in three patients with ECMO-explantation immediately after surgery. Bronchial anastomotic complications were not observed in any patient. First twins and second twins exhibited similar survival (p = 0.82) despite higher LAS in first twins (median 45 versus 34, p
- Published
- 2024
- Full Text
- View/download PDF
21. YTHDF2 governs muscle size through a targeted modulation of proteostasis
- Author
-
Christopher J. Gilbert, Charles P. Rabolli, Volha A. Golubeva, Kristina M. Sattler, Meifang Wang, Arsh Ketabforoush, W. David Arnold, Christoph Lepper, and Federica Accornero
- Subjects
Science - Abstract
Abstract The regulation of proteostasis is fundamental for maintenance of muscle mass and function. Activation of the TGF-β pathway drives wasting and premature aging by favoring the proteasomal degradation of structural muscle proteins. Yet, how this critical post-translational mechanism is kept in check to preserve muscle health remains unclear. Here, we reveal the molecular link between the post-transcriptional regulation of m6A-modified mRNA and the modulation of SMAD-dependent TGF-β signaling. We show that the m6A-binding protein YTHDF2 is essential to determining postnatal muscle size. Indeed, muscle-specific genetic deletion of YTHDF2 impairs skeletal muscle growth and abrogates the response to hypertrophic stimuli. We report that YTHDF2 controls the mRNA stability of the ubiquitin ligase ASB2 with consequences on anti-growth gene program activation through SMAD3. Our study identifies a post-transcriptional to post-translational mechanism for the coordination of gene expression in muscle.
- Published
- 2024
- Full Text
- View/download PDF
22. Temporal regulation of the Mediator complex during muscle proliferation, differentiation, regeneration, aging, and disease
- Author
-
Dominic W. Kolonay, Kristina M. Sattler, Corinne Strawser, Jill Rafael-Fortney, Maria M. Mihaylova, Katherine E. Miller, Christoph Lepper, and Kedryn K. Baskin
- Subjects
Mediator complex ,transcription ,myogenesis ,cell differentiation ,skeletal muscle regeneration ,Biology (General) ,QH301-705.5 - Abstract
Genesis of skeletal muscle relies on the differentiation and fusion of mono-nucleated muscle progenitor cells into the multi-nucleated muscle fiber syncytium. The temporally-controlled cellular and morphogenetic changes underlying this process are initiated by a series of highly coordinated transcription programs. At the core, the myogenic differentiation cascade is driven by muscle-specific transcription factors, i.e., the Myogenic Regulatory Factors (MRFs). Despite extensive knowledge on the function of individual MRFs, very little is known about how they are coordinated. Ultimately, highly specific coordination of these transcription programs is critical for their masterfully timed transitions, which in turn facilitates the intricate generation of skeletal muscle fibers from a naïve pool of progenitor cells. The Mediator complex links basal transcriptional machinery and transcription factors to regulate transcription and could be the integral component that coordinates transcription factor function during muscle differentiation, growth, and maturation. In this study, we systematically deciphered the changes in Mediator complex subunit expression in skeletal muscle development, regeneration, aging, and disease. We incorporated our in vitro and in vivo experimental results with analysis of publicly available RNA-seq and single nuclei RNA-seq datasets and uncovered the regulation of Mediator subunits in different physiological and temporal contexts. Our experimental results revealed that Mediator subunit expression during myogenesis is highly dynamic. We also discovered unique temporal patterns of Mediator expression in muscle stem cells after injury and during the early regeneration period, suggesting that Mediator subunits may have unique contributions to directing muscle stem cell fate. Although we observed few changes in Mediator subunit expression in aging muscles compared to younger muscles, we uncovered extensive heterogeneity of Mediator subunit expression in dystrophic muscle nuclei, characteristic of chronic muscle degeneration and regeneration cycles. Taken together, our study provides a glimpse of the complex regulation of Mediator subunit expression in the skeletal muscle cell lineage and serves as a springboard for mechanistic studies into the function of individual Mediator subunits in skeletal muscle.
- Published
- 2024
- Full Text
- View/download PDF
23. Mechanical thrombectomy in intermediate- and high-risk acute pulmonary embolism: hemodynamic outcomes at three months
- Author
-
Lucas Lauder, Patricia Pérez Navarro, Felix Götzinger, Sebastian Ewen, Hussam Al Ghorani, Bernhard Haring, Philipp M. Lepper, Saarraaken Kulenthiran, Michael Böhm, Andreas Link, Bruno Scheller, and Felix Mahfoud
- Subjects
Pulmonary embolism ,Mechanical thrombectomy ,Diseases of the respiratory system ,RC705-779 - Abstract
Abstract Background Mechanical thrombectomy has been shown to reduce thrombus burden and pulmonary artery pressure (PAP) and to improve right ventricular (RV) function in patients with high-risk or intermediate-high-risk pulmonary embolism (PE). As hemodynamic data after mechanical thrombectomy for PE are scarce, we aimed to assess the hemodynamic effects of mechanical thrombectomy in acute PE with right heart overload. Methods In this prospective, open-label study, patients with acute symptomatic, computed tomography-documented PE with signs of right heart overload underwent mechanical thrombectomy using the FlowTriever System. Right heart catheterization was performed immediately before and after thrombectomy and after three months. Transthoracic echocardiography was performed before thrombectomy, discharge, and at three months. This analysis was done after 20 patients completed three months of follow-up. Results Twenty-nine patients (34% female) underwent mechanical thrombectomy, of which 20 completed three months follow-up with right heart catheterization. Most patients were at high (17%) or intermediate-high (76%) risk and had bilateral PE (79%). Before thrombectomy, systolic PAP (sPAP) was severely elevated (mean 51.3 ± 11.6 mmHg). Mean sPAP dropped by -15.0 mmHg (95% confidence interval [CI]: -18.9 to -11.0; p
- Published
- 2023
- Full Text
- View/download PDF
24. High-dose methylprednisolone pulse therapy during refractory COVID-19 acute respiratory distress syndrome: a retrospective observational study
- Author
-
Carsten Zeiner, Malte Schröder, Selina Metzner, Johannes Herrmann, Quirin Notz, Sebastian Hottenrott, Daniel Röder, Patrick Meybohm, Philipp M. Lepper, and Christopher Lotz
- Subjects
Corticoid ,Methylprednisolone ,Pulse therapy ,SARS-CoV2 ,ECMO ,Salvage Therapy ,Diseases of the respiratory system ,RC705-779 - Abstract
Abstract Background Current COVID-19 guidelines recommend the early use of systemic corticoids for COVID-19 acute respiratory distress syndrome (ARDS). It remains unknown if high-dose methylprednisolone pulse therapy (MPT) ameliorates refractory COVID-19 ARDS after many days of mechanical ventilation or rapid deterioration with or without extracorporeal membrane oxygenation (ECMO). Methods This is a retrospective observational study. Consecutive patients with COVID-19 ARDS treated with a parenteral high-dose methylprednisolone pulse therapy at the intensive care units (ICU) of two University Hospitals between January 1st 2021 and November 30st 2022 were included. Clinical data collection was at ICU admission, start of MPT, 3-, 10- and 14-days post MPT. Results Thirty-seven patients (mean age 55 ± 12 years) were included in the study. MPT started at a mean of 17 ± 12 days after mechanical ventilation. Nineteen patients (54%) received ECMO support when commencing MPT. Mean paO2/FiO2 significantly improved 3- (p = 0.034) and 10 days (p = 0.0313) post MPT. The same applied to the necessary FiO2 10 days after MPT (p = 0.0240). There were no serious infectious complications. Twenty-four patients (65%) survived to ICU discharge, including 13 out of 20 (65%) needing ECMO support. Conclusions Late administration of high-dose MPT in a critical subset of refractory COVID-19 ARDS patients improved respiratory function and was associated with a higher-than-expected survival of 65%. These data suggest that high-dose MPT may be a viable salvage therapy in refractory COVID-19 ARDS.
- Published
- 2023
- Full Text
- View/download PDF
25. Toward a Data-based Approach to the Selection of Applied Behavior Analysis Program Characteristics
- Author
-
Lepper, Tracy L., Bailey, Jordan D., Topham, Michelle N., and Whittington, Emily A.
- Published
- 2023
- Full Text
- View/download PDF
26. Refuting the sensational claim of a Hopewell-ending cosmic airburst
- Author
-
Kevin C. Nolan, Andrew Weiland, Bradley T. Lepper, Jennifer Aultman, Laura R. Murphy, Bret J. Ruby, Kevin Schwarz, Matthew Davidson, DeeAnne Wymer, Timothy D. Everhart, Anthony M. Krus, and Timothy J. McCoy
- Subjects
Medicine ,Science - Published
- 2023
- Full Text
- View/download PDF
27. Capnocytophaga canimorsus Septicemia With Sepsis-Induced Coagulopathy and Endocarditis
- Author
-
Jeannine L. Kühnle, Maximilian Leitner, Vitalie Mazuru, Kai Borchardt, Sören L. Becker, Franziska Roth, Robert Bals, Philipp M. Lepper, Hans-Joachim Schäfers, and Isabella T. Jaumann
- Subjects
Infectious and parasitic diseases ,RC109-216 - Abstract
Capnocytophaga canimorsus is a rare cause of serious infections with a high mortality of 10% to 30%. It is usually found in the oral cavity of cats and dogs and can cause severe sepsis in immunocompromised patients. An 81-year-old female Caucasian patient presented with C. canimorsus sepsis after a dog bite in her finger three days before presentation to our emergency department. She initially was presented to us with sepsis, thrombopenia, and schistocytes in her laboratory findings, suggesting the differential diagnoses of the multiple subtypes of thrombotic microangiopathy. She was admitted to the medical intensive care unit of the University Hospital of Saarland because of septic shock with circulatory insufficiency. The patient received plasmapheresis, antibiotics, and dialysis, under which she improved significantly. The fingertip of the affected finger developed necrosis and had to be amputated. Furthermore, the patient was diagnosed with a mitral valve endocarditis, a very rare complication of C. canimorsus infection. It was treated conservatively with antibiotics and was no longer detectable 8 weeks after the diagnosis. Surgical intervention was not needed. The case describes well that it is still difficult to distinguish between thrombotic thrombocytopenic purpura (TTP), disseminated intravascular coagulation (DIC), and sepsis-induced coagulopathy (SIC), especially in the early phases of acute disease, especially in C. canimorsus-induced sepsis.
- Published
- 2024
- Full Text
- View/download PDF
28. A directive based hybrid Met Office NERC Cloud model
- Author
-
Brown, Nick, Lepper, Angus, Weiland, Michèle, Hill, Adrian, Shipway, Ben, and Maynard, Chris
- Subjects
Computer Science - Distributed, Parallel, and Cluster Computing - Abstract
Large Eddy Simulation is a critical modelling tool for the investigation of atmospheric flows, turbulence and cloud microphysics. The models used by the UK atmospheric research community are homogeneous and the latest model, MONC, is designed to run on substantial HPC systems with very high CPU core counts. In order to future proof these codes it is worth investigating other technologies and architectures which might support the communities running their codes at the exa-scale. In this paper we present a hybrid version of MONC, where the most computationally intensive aspect is offloaded to the GPU while the rest of the functionality runs concurrently on the CPU. Developed using the directive driven OpenACC, we consider the suitability and maturity of this technology to modern Fortran scientific codes as well general software engineering techniques which aid this type of porting work. The performance of our hybrid model at scale is compared against the CPU version before considering other tuning options and making a comparison between the energy usage of the homo- and hetero-geneous versions. The result of this work is a promising hybrid model that shows performance benefits of our approach when the GPU has a significant computational workload which can not only be applied to the MONC model but also other weather and climate simulations in use by the community.
- Published
- 2020
- Full Text
- View/download PDF
29. Practical Idiomatic Considerations for Checkable Meta-Logic in Experimental Functional Programming
- Author
-
Widemann, Baltasar Trancón y and Lepper, Markus
- Subjects
Computer Science - Programming Languages - Abstract
Implementing a complex concept as an executable model in a strongly typed, purely functional language hits a sweet spot between mere simulation and formal specification. For research and education it is often desirable to enrich the algorithmic code with meta-logical annotations, variously embodied as assertions, theorems or test cases. Checking frameworks use the inherent logical power of the functional paradigm to approximate theorem proving by heuristic testing. Here we propose several novel idioms to enhance the practical expressivity of checking, namely meta-language marking, nominal axiomatics, and constructive existentials. All of these are formulated in literate Haskell'98 with some common language extensions. Their use and impact are illustrated by application to a realistic modeling problem., Comment: Part of WFLP 2020 pre-proceedings
- Published
- 2020
30. Mechanical thrombectomy in intermediate- and high-risk acute pulmonary embolism: hemodynamic outcomes at three months
- Author
-
Lauder, Lucas, Pérez Navarro, Patricia, Götzinger, Felix, Ewen, Sebastian, Al Ghorani, Hussam, Haring, Bernhard, Lepper, Philipp M., Kulenthiran, Saarraaken, Böhm, Michael, Link, Andreas, Scheller, Bruno, and Mahfoud, Felix
- Published
- 2023
- Full Text
- View/download PDF
31. High-dose methylprednisolone pulse therapy during refractory COVID-19 acute respiratory distress syndrome: a retrospective observational study
- Author
-
Zeiner, Carsten, Schröder, Malte, Metzner, Selina, Herrmann, Johannes, Notz, Quirin, Hottenrott, Sebastian, Röder, Daniel, Meybohm, Patrick, Lepper, Philipp M., and Lotz, Christopher
- Published
- 2023
- Full Text
- View/download PDF
32. Refuting the sensational claim of a Hopewell-ending cosmic airburst
- Author
-
Nolan, Kevin C., Weiland, Andrew, Lepper, Bradley T., Aultman, Jennifer, Murphy, Laura R., Ruby, Bret J., Schwarz, Kevin, Davidson, Matthew, Wymer, DeeAnne, Everhart, Timothy D., Krus, Anthony M., and McCoy, Timothy J.
- Published
- 2023
- Full Text
- View/download PDF
33. Healthcare costs of congenital cytomegalovirus (cCMV) disease in infants during the first two years of life: a retrospective German claims database analysis
- Author
-
Stephan, Anna-Janina, de Lepper, Marion, Wölle, Regine, Luzak, Agnes, Wang, Wei, Jacob, Christian, Schneider, Kim Maren, Buxmann, Horst, Goelz, Rangmar, Hamprecht, Klaus, Kummer, Peter, Modrow, Susanne, Greiner, Wolfgang, and Reuschenbach, Miriam
- Published
- 2023
- Full Text
- View/download PDF
34. Outcome Prediction in Patients with Severe COVID-19 Requiring Extracorporeal Membrane Oxygenation—A Retrospective International Multicenter Study
- Author
-
Supady, Alexander, DellaVolpe, Jeff, Taccone, Fabio Silvio, Scharpf, Dominik, Ulmer, Matthias, Lepper, Philipp M, Halbe, Maximilian, Ziegeler, Stephan, Vogt, Alexander, Ramanan, Raj, Boldt, David, Stecher, Stephanie-Susanne, Montisci, Andrea, Spangenberg, Tobias, Marggraf, Olivier, Kunavarapu, Chandra, Peluso, Lorenzo, Muenz, Sebastian, Buerle, Monica, Nagaraj, Naveen G, Nuding, Sebastian, Toma, Catalin, Gudzenko, Vadim, Stemmler, Hans Joachim, Pappalardo, Federico, Trummer, Georg, Benk, Christoph, Michels, Guido, Duerschmied, Daniel, von zur Muehlen, Constantin, Bode, Christoph, Kaier, Klaus, Brodie, Daniel, Wengenmayer, Tobias, and Staudacher, Dawid L
- Subjects
Chemical Engineering ,Engineering ,Environmental Engineering ,Patient Safety ,Clinical Research ,Rare Diseases ,Prevention ,Good Health and Well Being ,acute respiratory distress syndrome ,extracorporeal membrane oxygenation ,COVID-19 ,SARS-CoV-2 ,Civil Engineering ,Chemical engineering ,Environmental engineering - Abstract
The role of veno-venous extracorporeal membrane oxygenation therapy (V-V ECMO) in severe COVID-19 acute respiratory distress syndrome (ARDS) is still under debate and conclusive data from large cohorts are scarce. Furthermore, criteria for the selection of patients that benefit most from this highly invasive and resource-demanding therapy are yet to be defined. In this study, we assess survival in an international multicenter cohort of COVID-19 patients treated with V-V ECMO and evaluate the performance of several clinical scores to predict 30-day survival. This is an investigator-initiated retrospective non-interventional international multicenter registry study (NCT04405973, first registered 28 May 2020). In 127 patients treated with V-V ECMO at 15 centers in Germany, Switzerland, Italy, Belgium, and the United States, we calculated the Sequential Organ Failure Assessment (SOFA) Score, Simplified Acute Physiology Score II (SAPS II), Acute Physiology And Chronic Health Evaluation II (APACHE II) Score, Respiratory Extracorporeal Membrane Oxygenation Survival Prediction (RESP) Score, Predicting Death for Severe ARDS on V‑V ECMO (PRESERVE) Score, and 30-day survival. In our study cohort which enrolled 127 patients, overall 30-day survival was 54%. Median SOFA, SAPS II, APACHE II, RESP, and PRESERVE were 9, 36, 17, 1, and 4, respectively. The prognostic accuracy for all these scores (area under the receiver operating characteristic-AUROC) ranged between 0.548 and 0.605. The use of scores for the prediction of mortality cannot be recommended for treatment decisions in severe COVID-19 ARDS undergoing V-V ECMO; nevertheless, scoring results below or above a specific cut-off value may be considered as an additional tool in the evaluation of prognosis. Survival rates in this cohort of COVID-19 patients treated with V‑V ECMO were slightly lower than those reported in non-COVID-19 ARDS patients treated with V-V ECMO.
- Published
- 2021
35. Melanoma patients with immune-related adverse events after immune checkpoint inhibitors are characterized by a distinct immunological phenotype of circulating T cells and M-MDSCs
- Author
-
Alisa Lepper, Rebekka Bitsch, Feyza Gül Özbay Kurt, Ihor Arkhypov, Samantha Lasser, Jochen Utikal, and Viktor Umansky
- Subjects
Immune-related adverse events ,immunotherapy ,melanoma ,Immunologic diseases. Allergy ,RC581-607 ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
ABSTRACTTreatment with immune checkpoint inhibitors (ICIs) has improved the prognosis of melanoma patients. However, ICIs can cause an overactivation of the immune system followed by diverse immunological side effects known as immune-related adverse events (irAE). Currently, the toxicity of irAE is limiting the usage of ICIs. Here, we studied circulating monocytic myeloid-derived suppressor cells (M-MDSCs) and T cells in course of irAE after the ICI therapy. Our longitudinal study involved 31 melanoma patients with and without adverse events during anti-PD-1 monotherapy or anti-CTLA-4/PD-1 combination therapy. Peripheral blood samples were analyzed before ICI start, during ICI treatment, at the time point of irAE and during immunosuppressive treatment to cure irAE. We observed an enhanced progression-free survival among patients with irAE. In patients with irAE, we found an upregulation of CD69 on CD8+ T cells and a decreased frequency of regulatory T cells (Tregs). Moreover, lower frequencies of Tregs correlated with more severe side effects. Patients treated with immunomodulatory drugs after irAE manifestation tend to show an elevated number of M-MDSCs during an immunosuppressive therapy. We suggest that an activation of CD8+ T cells and the reduction of Treg frequencies could be responsible for the development of irAE.
- Published
- 2023
- Full Text
- View/download PDF
36. Improving the Performance of the Paisley Pattern-Matching EDSL by Staged Combinatorial Compilation
- Author
-
Widemann, Baltasar Trancón y and Lepper, Markus
- Subjects
Computer Science - Programming Languages - Abstract
Paisley is a declarative lightweight embedded domain-specific language for expressive, non-deterministic, non-invasive pattern matching on arbitrary data structures in Java applications. As such, it comes as a pure Java library of pattern-matching combinators and corresponding programming idioms. While the combinators support a basic form of self-optimization based on heuristic metadata, overall performance is limited by the distributed and compositional implementation that impedes non-local code optimization. In this paper, we describe a technique for improving the performance of Paisley transparently, without compromising the flexible and extensible combinatorial design. By means of distributed bytecode generation, dynamic class loading and just-in-time compilation of patterns, the run-time overhead of the combinatorial approach can be reduced significantly, without requiring any technology other than a standard Java virtual machine and our LLJava bytecode framework. We evaluate the impact by comparison to earlier benchmarking results on interpreted Paisley. The key ideas of our compilation technique are fairly general, and apply in principle to any kind of combinator language running on any jit-compiling host., Comment: Part of DECLARE 19 proceedings
- Published
- 2019
37. D2d -- XML for Authors
- Author
-
Lepper, Markus and Widemann, Baltasar Trancón y
- Subjects
Computer Science - Programming Languages ,J.5 ,J.1 ,K.3 ,D.3.4 - Abstract
D2d is an input format which allows experienced authors to create type correct xml text objects with minimal disturbance of the creative flow of writing. This paper contains the complete specification of the parsing process, including the generation of error messages., Comment: 10 pages, 4 tables (Technical Report -- Bad Honnef 2013)
- Published
- 2019
38. Simple and Effective Relation-Based Approaches To XPath and XSLT Type Checking (Technical Report, Bad Honnef 2015)
- Author
-
Widemann, Baltasar Trancón y and Lepper, Markus
- Subjects
Computer Science - Programming Languages ,D.3 - Abstract
XPath is a language for addressing parts of an XML document. We give an abstract interpretation of XPath expressions in terms of relations on document node types. Node-set-related XPath language constructs are mapped straightforwardly onto basic, well-understood and easily computable relational operations. Hence our interpretation gives both extremely concise type-level denotational semantics and a practical analysis tool for the node-set fragment of the XPath 1.0 language. This method is part of the TPath implementation of XPath. XSL-T is a pure functional language for transforming XML documents. For the most common case, the transformation into an XML document, type checking of the transformation code is unfeasible in general, but strongly required in practice. It turned out that the relational approach of TPath can be carried over to check all fragments of the result language, which are contained verbatim in the transformation code. This leads to a technique called "Fragmented Validation" and is part of the txsl implementation of XSL-T., Comment: 10 pages, 6 tables
- Published
- 2019
39. Introducing Minkowski Normality
- Author
-
Dajani, K., de Lepper, M. R., and Robinson, E. A.
- Subjects
Mathematics - Dynamical Systems ,11K16, 11K50 - Abstract
We introduce the concept of Minkowski normality, a different type of normality for the regular continued fraction expansion. We use the ordering \[ \frac{1}{2},\quad \frac{1}{3}, \frac{2}{3},\quad \frac{1}{4}, \frac{3}{4},\frac{2}{5}, \frac{3}{5},\quad \frac{1}{5}, \cdots \] of rationals obtained from the Kepler tree to give a concrete construction of an infinite continued fraction whose digits are distributed according to the Minkowski question mark measure. To do this we define an explicit correspondence between continued fraction expansions and binary codes to show that we can use the dyadic Champernowne number to prove normality of the constructed number. Furthermore, we provide a generalised construction based on the underlying structure of the Kepler tree, which shows that any construction that concatenates the continued fraction expansions of all rationals, ordered so that the sum of the digits of the continued fraction expansion are non-decreasing, results in a number that is Minkowski normal., Comment: 15 pages, 2 figures
- Published
- 2019
40. Healthcare costs of congenital cytomegalovirus (cCMV) disease in infants during the first two years of life: a retrospective German claims database analysis
- Author
-
Anna-Janina Stephan, Marion de Lepper, Regine Wölle, Agnes Luzak, Wei Wang, Christian Jacob, Kim Maren Schneider, Horst Buxmann, Rangmar Goelz, Klaus Hamprecht, Peter Kummer, Susanne Modrow, Wolfgang Greiner, and Miriam Reuschenbach
- Subjects
Congenital CMV infection ,Newborns ,Health economic burden ,Germany ,Administrative data ,Medicine (General) ,R5-920 - Abstract
Abstract Background Congenital cytomegalovirus (cCMV) infection can cause severe neurological damage, growth retardation, hearing loss, and microcephaly in infants. We aimed at assessing healthcare costs of infants with recorded cCMV diagnosis in an administrative claims database in the first 2 years of life. Methods We conducted a retrospective, controlled cohort study using German claims data from the Institute for Applied Health Research Berlin (InGef) database. Incremental healthcare costs during the first and second year of life were assessed by matching (1:60) infants with cCMV diagnoses ≤ 90 days after birth (cCMV90 cohort) to infants without cCMV diagnosis (“representative” controls) and infants with cCMV diagnoses ≤ 21 days after birth plus specific symptoms (cCMV21-S) to infants without cCMV and any ICD-10-GM records (besides Z00-Z99) until 4th preventive health check-up (“healthy” controls). Due to missing data, mean imputation was applied for aids and remedies costs. Results We identified 54 and 24 infants born 2014–2018 for the cCMV90 and cCMV21-S cohorts, respectively. During the first year, mean (median) healthcare costs were significantly higher in cCMV90 cases vs. “representative” controls (€22,737 (€9759) vs. €3091 (€863), p
- Published
- 2023
- Full Text
- View/download PDF
41. TNF-related apoptosis-inducing ligand, interferon gamma-induced protein 10, and C-reactive protein in predicting the progression of SARS-CoV-2 infection: a prospective cohort study
- Author
-
Sina A. Tegethoff, Guy Danziger, Dennis Kühn, Charlotte Kimmer, Thomas Adams, Lena Heintz, Carlos Metz, Katharina Reifenrath, Rebecca Angresius, Sebastian Mang, Torben Rixecker, André Becker, Jürgen Geisel, Christophe Jentgen, Frederik Seiler, Matthias C. Reichert, Franziska Fröhlich, Sascha Meyer, Jürgen Rissland, Sebastian Ewen, Gudrun Wagenpfeil, Katharina Last, Sigrun Smola, Robert Bals, Frank Lammert, Sören L. Becker, Marcin Krawczyk, Philipp M. Lepper, and Cihan Papan
- Subjects
COVID-19 ,Severity prediction ,Host response ,Biomarkers ,TRAIL ,IP-10 ,Infectious and parasitic diseases ,RC109-216 - Abstract
ABSTRACT: Background: Early prognostication of COVID-19 severity will potentially improve patient care. Biomarkers, such as TNF-related apoptosis-inducing ligand (TRAIL), interferon gamma-induced protein 10 (IP-10), and C-reactive protein (CRP), might represent possible tools for point-of-care testing and severity prediction. Methods: In this prospective cohort study, we analyzed serum levels of TRAIL, IP-10, and CRP in patients with COVID-19, compared them with control subjects, and investigated the association with disease severity. Results: A total of 899 measurements were performed in 132 patients (mean age 64 years, 40.2% females). Among patients with COVID-19, TRAIL levels were lower (49.5 vs 87 pg/ml, P = 0.0142), whereas IP-10 and CRP showed higher levels (667.5 vs 127 pg/ml, P
- Published
- 2022
- Full Text
- View/download PDF
42. A Practical Study of Control in Objected-Oriented--Functional--Logic Programming with Paisley
- Author
-
Widemann, Baltasar Trancón y and Lepper, Markus
- Subjects
Computer Science - Programming Languages ,D.1.5 ,D.1.6 ,D.3.3 - Abstract
Paisley is an extensible lightweight embedded domain-specific language for nondeterministic pattern matching in Java. Using simple APIs and programming idioms, it brings the power of functional-logic processing of arbitrary data objects to the Java platform, without constraining the underlying object-oriented semantics. Here we present an extension to the Paisley framework that adds pattern-based control flow. It exploits recent additions to the Java language, namely functional interfaces and lambda expressions, for an explicit and transparent continuation-passing style approach to control. We evaluate the practical impact of the novel features on a real-world case study that reengineers a third-party open-source project to use Paisley in place of conventional object-oriented data query idioms. We find the approach viable for incremental refactoring of legacy code, with significant qualitative improvements regarding separation of concerns, clarity and intentionality, thus making for easier code understanding, testing and debugging., Comment: In Proceedings WLP'15/'16/WFLP'16, arXiv:1701.00148
- Published
- 2017
- Full Text
- View/download PDF
43. Modulation Mining—Computer-Aided Exploration of Functional Chord Forms
- Author
-
Markus Lepper, Baltasar Trancón y Widemann, and Michael Oehler
- Subjects
Music ,M1-5000 ,Psychology ,BF1-990 - Abstract
The different labelling systems defined by the functional theories of harmony have been developed from about 1870 to 1950, without the help of computers. The complexity of harmonic labels spans from pure triads over added characteristic dissonances, over alterations of the fifth, up to non-chord notes like suspensions. Computer-based evaluation of functional label expressions shows that thereby their cardinality increases up to several thousands. For this, we present the basic theory, a concrete program implemented in Prolog, and some empirical results. The software is capable of analysing historic published analyses by inductively collecting all appearing labels, as well as theories as such, where the set of labels is given deductively, by regular expressions. A major application is the mining for possible modulation chords, i.e. different functional labels which result in (enharmonically) the same pitch classes. That this strategy had actually been applied by composers manually is explained by significant examples from the Romantic period.
- Published
- 2023
- Full Text
- View/download PDF
44. Burden of sequelae and healthcare resource utilization in the first year of life in infants born with congenital cytomegalovirus (cCMV) infection in Germany: A retrospective statutory health insurance claims database analysis.
- Author
-
Marion de Lepper, Anna-Janina Stephan, Regine Wölle, Wei Wang, Christian Jacob, Kim Maren Schneider, Horst Buxmann, Rangmar Goelz, Klaus Hamprecht, Peter Kummer, Susanne Modrow, Wolfgang Greiner, Agnes Luzak, and Miriam Reuschenbach
- Subjects
Medicine ,Science - Abstract
BackgroundCongenital cytomegalovirus (cCMV) infection can have a broad range of manifestations. This study aimed to assess cCMV-associated sequelae and healthcare resource utilization (HCRU) in infants during the first year of life in Germany.MethodsA retrospective, controlled cohort study using German claims data from the Institute for Applied Health Research Berlin (InGef) database was conducted. cCMV-associated sequelae and HCRU during the first year of life were assessed by matching (1:60) infants with at least one inpatient/outpatient cCMV diagnosis (ICD-10-GM: P35.1) ≤90 days after birth (cCMV90 cohort) and infants with at least one inpatient cCMV diagnosis plus specific sequelae ≤21 days after birth (cCMV21-S) to infants without cCMV or CMV (ICD-10-GM: B25) diagnosis (control group), respectively. Outcomes were analyzed during the first 365 days of life.ResultsBetween 2014-2018, we identified 54 newborns for cCMV90 and 24 newborns for cCMV21-S cohort. Compared to the 3,240 and 1,440 controls, respectively, more cCMV90 infants (83.3% vs. 41.9%, pConclusionscCMV-infection shows a considerable disease and healthcare burden during the first year of life. More than 80% of the identified newborns with cCMV suffered from at least one associated sequela during the first year of life, including long-term sequelae such as SNHL (40%) and visual impairment (13%). Additional steps for prevention of cCMV infection and associated sequelae as well as a comprehensive monitoring of disease burden are needed.
- Published
- 2023
- Full Text
- View/download PDF
45. Metalation and coordination reactions of 2 H-meso-trans -di( p -cyanophenyl)porphyrin on Ag(111) with coadsorbed cobalt atoms
- Author
-
Kuliga, Jan, Zhang, Liang, Lepper, Michael, Lungerich, Dominik, Hölzel, Helen, Jux, Norbert, Steinrück, Hans-Peter, and Marbach, Hubertus
- Subjects
Chemical Physics - Abstract
We investigated the metalation and coordination reactions of Co with 2H-5,15-bis(para-cyanophenyl)-10,20-bisphenylporphyrin (2HtransDCNPP) on a Ag(111) surface by scanning tunneling microscopy. At room temperature (RT), 2HtransDCNPPs self-assemble into a supramolecular structure stabilized by intermolecular hydrogen bonding. The metalation of 2HtransDCNPP is achieved either by depositing Co atoms onto the supramolecular structure at RT, or, alternatively, by depositing the molecules onto a submonolayer Co-precovered Ag(111) surface with a subsequent heating to 500 K. In addition, the molecules coordinate to Co atoms through the N atoms in the peripheral cyano groups with a preference of isolated 4-fold coordination motifs at RT.
- Published
- 2018
46. Metalation and coordination reactions of 2H-meso-trans-di(p-cyanophenyl)porphyrin on Ag(111) with coadsorbed cobalt atoms.
- Author
-
Kuliga, Jan, Zhang, Liang, Lepper, Michael, Lungerich, Dominik, Hölzel, Helen, Jux, Norbert, Steinrück, Hans-Peter, and Marbach, Hubertus
- Subjects
Physical Sciences ,Chemical Sciences ,Chemical Physics - Abstract
We investigated the metalation and coordination reactions of Co with 2H-5,15-bis(para-cyanophenyl)-10,20-bisphenylporphyrin (2HtransDCNPP) on a Ag(111) surface by scanning tunneling microscopy. At room temperature (RT), 2HtransDCNPPs self-assemble into a supramolecular structure stabilized by intermolecular hydrogen bonding. The metalation of 2HtransDCNPP is achieved either by depositing Co atoms onto the supramolecular structure at RT, or, alternatively, by depositing the molecules onto a submonolayer Co-precovered Ag(111) surface with a subsequent heating to 500 K. In addition, the molecules coordinate to Co atoms through the N atoms in the peripheral cyano groups with a preference of isolated 4-fold coordination motifs at RT.
- Published
- 2018
47. Controlling the Self‐Metalation Rate of Tetraphenylporphyrins on Cu(111) via Cyano Functionalization
- Author
-
Lepper, Michael, Köbl, Julia, Zhang, Liang, Meusel, Manuel, Hölzel, Helen, Lungerich, Dominik, Jux, Norbert, de Siervo, Abner, Meyer, Bernd, Steinrück, Hans‐Peter, and Marbach, Hubertus
- Subjects
cyano functionalization ,porphyrinoids ,scanning tunneling microscopy ,self-metalation ,surface chemistry ,Chemical Sciences ,Organic Chemistry - Abstract
The reaction rate of the self-metalation of free-base tetraphenylporphyrins (TPPs) on Cu(111) increases with the number of cyano groups (n=0, 1, 2, 4) attached at the para positions of the phenyl rings. The findings are based on isothermal scanning tunneling microscopy (STM) measurements. At room temperature, all investigated free-base TPP derivatives adsorb as individual molecules and are aligned with respect to densely packed Cu substrate rows. Annealing at 400 K leads to the formation of linear dimers and/or multimers via CN-Cu-CN bonds, accompanied by self-metalation of the free-base porphyrins following a first-order rate equation. When comparing the non-cyano-functionalized and the tetracyano-functionalized molecules, we find a decrease of the reaction rate by a factor of more than 20, corresponding to an increase of the activation energy from 1.48 to 1.59 eV. Density functional theory (DFT) calculations give insights into the influence of the peripheral electron-withdrawing cyano groups and explain the experimentally observed effects.
- Published
- 2018
48. Key characteristics impacting survival of COVID-19 extracorporeal membrane oxygenation
- Author
-
Herrmann, Johannes, Lotz, Christopher, Karagiannidis, Christian, Weber-Carstens, Steffen, Kluge, Stefan, Putensen, Christian, Wehrfritz, Andreas, Schmidt, Karsten, Ellerkmann, Richard K., Oswald, Daniel, Lotz, Gösta, Zotzmann, Viviane, Moerer, Onnen, Kühn, Christian, Kochanek, Matthias, Muellenbach, Ralf, Gaertner, Matthias, Fichtner, Falk, Brettner, Florian, Findeisen, Michael, Heim, Markus, Lahmer, Tobias, Rosenow, Felix, Haake, Nils, Lepper, Philipp M., Rosenberger, Peter, Braune, Stephan, Kohls, Mirjam, Heuschmann, Peter, and Meybohm, Patrick
- Published
- 2022
- Full Text
- View/download PDF
49. Lethal Waterhouse–Friderichsen syndrome caused by Capnocytophaga canimorsus in an asplenic patient
- Author
-
Schuler, Franziska, Padberg, Jan-Sören, Hullermann, Carsten, Kümpers, Philipp, Lepper, Johannes, Schulte, Miriam, Uekötter, Andreas, Schaumburg, Frieder, and Kahl, Barbara C.
- Published
- 2022
- Full Text
- View/download PDF
50. Facilitating stress prevention in micro and small-sized enterprises: protocol for a mixed method study to evaluate the effectiveness and implementation process of targeted web-based interventions
- Author
-
Engels, Miriam, Boß, Leif, Engels, Judith, Kuhlmann, Rebekka, Kuske, Johanna, Lepper, Sarah, Lesener, Lutz, Pavlista, Valeria, Diebig, Mathias, Lunau, Thorsten, Ruhle, Sascha A., Zapkau, Florian B., Angerer, Peter, Hoewner, Jörg, Lehr, Dirk, Schwens, Christian, Süß, Stefan, Wulf, Ines C., and Dragano, Nico
- Published
- 2022
- Full Text
- View/download PDF
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.