39 results on '"Pierre Olivier Frappart"'
Search Results
2. Progenitor death drives retinal dysplasia and neuronal degeneration in a mouse model of ATRIP-Seckel syndrome
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Gabriel E. Matos-Rodrigues, Pedro B. Tan, Maurício Rocha-Martins, Clara F. Charlier, Anielle L. Gomes, Felipe Cabral-Miranda, Paulius Grigaravicius, Thomas G. Hofmann, Pierre-Olivier Frappart, and Rodrigo A. P. Martins
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apoptosis ,dna damage response ,neurodevelopment ,neurodegeneration ,visual system development ,photoreceptor ,Medicine ,Pathology ,RB1-214 - Abstract
Seckel syndrome is a type of microcephalic primordial dwarfism (MPD) that is characterized by growth retardation and neurodevelopmental defects, including reports of retinopathy. Mutations in key mediators of the replication stress response, the mutually dependent partners ATR and ATRIP, are among the known causes of Seckel syndrome. However, it remains unclear how their deficiency disrupts the development and function of the central nervous system (CNS). Here, we investigated the cellular and molecular consequences of ATRIP deficiency in different cell populations of the developing murine neural retina. We discovered that conditional inactivation of Atrip in photoreceptor neurons did not affect their survival or function. In contrast, Atrip deficiency in retinal progenitor cells (RPCs) led to severe lamination defects followed by secondary photoreceptor degeneration and loss of vision. Furthermore, we showed that RPCs lacking functional ATRIP exhibited higher levels of replicative stress and accumulated endogenous DNA damage that was accompanied by stabilization of TRP53. Notably, inactivation of Trp53 prevented apoptosis of Atrip-deficient progenitor cells and was sufficient to rescue retinal dysplasia, neurodegeneration and loss of vision. Together, these results reveal an essential role of ATRIP-mediated replication stress response in CNS development and suggest that the TRP53-mediated apoptosis of progenitor cells might contribute to retinal malformations in Seckel syndrome and other MPD disorders. This article has an associated First Person interview with the first author of the paper.
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- 2020
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3. RINT1 Loss Impairs Retinogenesis Through TRP53-Mediated Apoptosis
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Anielle L. Gomes, Gabriel E. Matos-Rodrigues, Pierre-Olivier Frappart, and Rodrigo A. P. Martins
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DNA damage response ,replicative stress ,neurodegeneration ,visual system development ,neurogenesis ,ganglion cells ,Biology (General) ,QH301-705.5 - Abstract
Genomic instability in the central nervous system (CNS) is associated with defective neurodevelopment and neurodegeneration. Congenital human syndromes that affect the CNS development originate from mutations in genes of the DNA damage response (DDR) pathways. RINT1 (Rad50-interacting protein 1) is a partner of RAD50, that participates in the cellular responses to DNA double-strand breaks (DSB). Recently, we showed that Rint1 regulates cell survival in the developing brain and its loss led to premature lethality associated with genomic stability. To bypass the lethality of Rint1 inactivation in the embryonic brain and better understand the roles of RINT1 in CNS development, we conditionally inactivated Rint1 in retinal progenitor cells (RPCs) during embryogenesis. Rint1 loss led to accumulation of endogenous DNA damage, but RINT1 was not necessary for the cell cycle checkpoint activation in these neural progenitor cells. As a consequence, proliferating progenitors and postmitotic neurons underwent apoptosis causing defective neurogenesis of retinal ganglion cells, malformation of the optic nerve and blindness. Notably, inactivation of Trp53 prevented apoptosis of the RPCs and rescued the generation of retinal neurons and vision loss. Together, these results revealed an essential role for TRP53-mediated apoptosis in the malformations of the visual system caused by RINT1 loss and suggests that defective responses to DNA damage drive retinal malformations.
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- 2020
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4. Correction: ATRIP protects progenitor cells against DNA damage in vivo
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Gabriel E. Matos-Rodrigues, Paulius Grigaravicius, Bernard S. Lopez, Thomas G. Hofmann, Pierre-Olivier Frappart, and Rodrigo A. P. Martins
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Cytology ,QH573-671 - Abstract
A Correction to this paper has been published: https://doi.org/10.1038/s41419-020-03227-w
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- 2020
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5. Pancreatic Progenitors and Organoids as a Prerequisite to Model Pancreatic Diseases and Cancer
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Meike Hohwieler, Martin Müller, Pierre-Olivier Frappart, and Sandra Heller
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Internal medicine ,RC31-1245 - Abstract
Embryonic stem cells (ESCs) and induced pluripotent stem cells (iPSCs) are characterized by their unique capacity to stepwise differentiate towards any particular cell type in an adult organism. Pluripotent stem cells provide a beneficial platform to model hereditary diseases and even cancer development. While the incidence of pancreatic diseases such as diabetes and pancreatitis is increasing, the understanding of the underlying pathogenesis of particular diseases remains limited. Only a few recent publications have contributed to the characterization of human pancreatic development in the fetal stage. Hence, most knowledge of pancreatic specification is based on murine embryology. Optimizing and understanding current in vitro protocols for pancreatic differentiation of ESCs and iPSCs constitutes a prerequisite to generate functional pancreatic cells for better disease modeling and drug discovery. Moreover, human pancreatic organoids derived from pluripotent stem cells, organ-restricted stem cells, and tumor samples provide a powerful technology to model carcinogenesis and hereditary diseases independent of genetically engineered mouse models. Herein, we summarize recent advances in directed differentiation of pancreatic organoids comprising endocrine cell types. Beyond that, we illustrate up-and-coming applications for organoid-based platforms.
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- 2019
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6. Pancreatic Ductal Organoids React Kras Dependent to the Removal of Tumor Suppressive Roadblocks
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Lukas Perkhofer, Melanie Engler, Johann Gout, Frank Arnold, Mareen Morawe, Markus Breunig, Thomas Seufferlein, Alexander Kleger, and Pierre-Olivier Frappart
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Internal medicine ,RC31-1245 - Abstract
Pancreatic ductal adenocarcinoma (PDAC) is still the Achilles heel in modern oncology, with an increasing incidence accompanied by a persisting high mortality. The developmental process of PDAC is thought to be stepwise via precursor lesions and sequential accumulation of mutations. Thereby, current sequencing studies recapitulate this genetic heterogeneity in PDAC and show besides a handful of driver mutations (KRAS, TP53) a plethora of passenger mutations that allow to define subtypes. However, modeling the mutations of interest and their effects is still challenging. Interestingly, organoids have the potential to recapitulate in vitro, the in vivo characteristics of the tissue they originate from. Here, we could establish and develop tools allowing us to isolate, culture, and genetically modify ductal mouse organoids. Transferred to known effectors in the IPMN-PDAC sequence, we could reveal significantly increased proliferative and self-renewal capacities for PTEN and RNF43 deficiency in the context of oncogenic KRASG12D in mouse pancreatic organoids. Overall, we were able to obtain promising data centering ductal organoids in the focus of future PDAC research.
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- 2019
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7. Supplementary Data from RINT1 Regulates SUMOylation and the DNA Damage Response to Preserve Cellular Homeostasis in Pancreatic Cancer
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Alexander Kleger, Pierre-Olivier Frappart, Thomas Seufferlein, Peter Möller, Hans A. Kestler, Sebastian Wiese, Volker Rasche, Konstantin M.J. Sparrer, Ewa K. Kaminska, Axel Fürstberger, Li Hao, Ninel Azoitei, Thomas J. Ettrich, André Lechel, Caterina Prelli Bozzo, Jeanette Scheible, Karolin Walter, Lukas Perkhofer, Elodie Roger, Stephanie E. Weissinger, Heike Wiese, Johann Gout, and Frank Arnold
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Contains a more detailed method section as well as all additional supplementary figures S1 to S8
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- 2023
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8. Figure S5 Tumour growth upon ATRi and Gemcitabine Treatment in Allografts model from ATM Deficiency Generating Genomic Instability Sensitizes Pancreatic Ductal Adenocarcinoma Cells to Therapy-Induced DNA Damage
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Alexander Kleger, Pierre-Olivier Frappart, Hans Christian Reinhardt, Thomas Seufferlein, Bence Sipos, Lisa Wiesmüller, Martin Wagner, Jochen Gaedcke, Evelin Schröck, Laura Gieldon, Hana Algül, Marina Lesina, Hanibal Bohnenberger, Meike Hohwieler, Stefan Liebau, Qiong Lin, Ninel Azoitei, André Lechel, Ronan Russell, Elisabeth Hessmann, Dietrich Alexander Ruess, Stephanie Hampp, Michaela Ihle, Maria Carolina Romero Carrasco, Anna Schmitt, and Lukas Perkhofer
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Tumour growth upon ATRi and Gemcitabine Treatment in Allografts model
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- 2023
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9. Figure S2 from ATM Deficiency Generating Genomic Instability Sensitizes Pancreatic Ductal Adenocarcinoma Cells to Therapy-Induced DNA Damage
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Alexander Kleger, Pierre-Olivier Frappart, Hans Christian Reinhardt, Thomas Seufferlein, Bence Sipos, Lisa Wiesmüller, Martin Wagner, Jochen Gaedcke, Evelin Schröck, Laura Gieldon, Hana Algül, Marina Lesina, Hanibal Bohnenberger, Meike Hohwieler, Stefan Liebau, Qiong Lin, Ninel Azoitei, André Lechel, Ronan Russell, Elisabeth Hessmann, Dietrich Alexander Ruess, Stephanie Hampp, Michaela Ihle, Maria Carolina Romero Carrasco, Anna Schmitt, and Lukas Perkhofer
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Tumour growth upon Olaparib and Gemcitabine Treatment in Allografts model
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- 2023
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10. Data from RINT1 Regulates SUMOylation and the DNA Damage Response to Preserve Cellular Homeostasis in Pancreatic Cancer
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Alexander Kleger, Pierre-Olivier Frappart, Thomas Seufferlein, Peter Möller, Hans A. Kestler, Sebastian Wiese, Volker Rasche, Konstantin M.J. Sparrer, Ewa K. Kaminska, Axel Fürstberger, Li Hao, Ninel Azoitei, Thomas J. Ettrich, André Lechel, Caterina Prelli Bozzo, Jeanette Scheible, Karolin Walter, Lukas Perkhofer, Elodie Roger, Stephanie E. Weissinger, Heike Wiese, Johann Gout, and Frank Arnold
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Pancreatic ductal adenocarcinoma (PDAC) still presents with a dismal prognosis despite intense research. Better understanding of cellular homeostasis could identify druggable targets to improve therapy. Here we propose RAD50-interacting protein 1 (RINT1) as an essential mediator of cellular homeostasis in PDAC. In a cohort of resected PDAC, low RINT1 protein expression correlated significantly with better survival. Accordingly, RINT1 depletion caused severe growth defects in vitro associated with accumulation of DNA double-strand breaks (DSB), G2 cell cycle arrest, disruption of Golgi–endoplasmic reticulum homeostasis, and cell death. Time-resolved transcriptomics corroborated by quantitative proteome and interactome analyses pointed toward defective SUMOylation after RINT1 loss, impairing nucleocytoplasmic transport and DSB response. Subcutaneous xenografts confirmed tumor response by RINT1 depletion, also resulting in a survival benefit when transferred to an orthotopic model. Primary human PDAC organoids licensed RINT1 relevance for cell viability. Taken together, our data indicate that RINT1 loss affects PDAC cell fate by disturbing SUMOylation pathways. Therefore, a RINT1 interference strategy may represent a new putative therapeutic approach.Significance:These findings provide new insights into the aggressive behavior of PDAC, showing that RINT1 directly correlates with survival in patients with PDAC by disturbing the SUMOylation process, a crucial modification in carcinogenesis.
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- 2023
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11. Data from ATM Deficiency Generating Genomic Instability Sensitizes Pancreatic Ductal Adenocarcinoma Cells to Therapy-Induced DNA Damage
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Alexander Kleger, Pierre-Olivier Frappart, Hans Christian Reinhardt, Thomas Seufferlein, Bence Sipos, Lisa Wiesmüller, Martin Wagner, Jochen Gaedcke, Evelin Schröck, Laura Gieldon, Hana Algül, Marina Lesina, Hanibal Bohnenberger, Meike Hohwieler, Stefan Liebau, Qiong Lin, Ninel Azoitei, André Lechel, Ronan Russell, Elisabeth Hessmann, Dietrich Alexander Ruess, Stephanie Hampp, Michaela Ihle, Maria Carolina Romero Carrasco, Anna Schmitt, and Lukas Perkhofer
- Abstract
Pancreatic ductal adenocarcinomas (PDAC) harbor recurrent functional mutations of the master DNA damage response kinase ATM, which has been shown to accelerate tumorigenesis and epithelial–mesenchymal transition. To study how ATM deficiency affects genome integrity in this setting, we evaluated the molecular and functional effects of conditional Atm deletion in a mouse model of PDAC. ATM deficiency was associated with increased mitotic defects, recurrent genomic rearrangements, and deregulated DNA integrity checkpoints, reminiscent of human PDAC. We hypothesized that altered genome integrity might allow synthetic lethality-based options for targeted therapeutic intervention. Supporting this possibility, we found that the PARP inhibitor olaparib or ATR inhibitors reduced the viability of PDAC cells in vitro and in vivo associated with a genotype-selective increase in apoptosis. Overall, our results offered a preclinical mechanistic rationale for the use of PARP and ATR inhibitors to improve treatment of ATM-mutant PDAC. Cancer Res; 77(20); 5576–90. ©2017 AACR.
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- 2023
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12. Table S2 from ATM Deficiency Generating Genomic Instability Sensitizes Pancreatic Ductal Adenocarcinoma Cells to Therapy-Induced DNA Damage
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Alexander Kleger, Pierre-Olivier Frappart, Hans Christian Reinhardt, Thomas Seufferlein, Bence Sipos, Lisa Wiesmüller, Martin Wagner, Jochen Gaedcke, Evelin Schröck, Laura Gieldon, Hana Algül, Marina Lesina, Hanibal Bohnenberger, Meike Hohwieler, Stefan Liebau, Qiong Lin, Ninel Azoitei, André Lechel, Ronan Russell, Elisabeth Hessmann, Dietrich Alexander Ruess, Stephanie Hampp, Michaela Ihle, Maria Carolina Romero Carrasco, Anna Schmitt, and Lukas Perkhofer
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Description of the genomic alterations in KC and AKC PDAC cell lines
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- 2023
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13. Figure S1 GSEA Analysis from ATM Deficiency Generating Genomic Instability Sensitizes Pancreatic Ductal Adenocarcinoma Cells to Therapy-Induced DNA Damage
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Alexander Kleger, Pierre-Olivier Frappart, Hans Christian Reinhardt, Thomas Seufferlein, Bence Sipos, Lisa Wiesmüller, Martin Wagner, Jochen Gaedcke, Evelin Schröck, Laura Gieldon, Hana Algül, Marina Lesina, Hanibal Bohnenberger, Meike Hohwieler, Stefan Liebau, Qiong Lin, Ninel Azoitei, André Lechel, Ronan Russell, Elisabeth Hessmann, Dietrich Alexander Ruess, Stephanie Hampp, Michaela Ihle, Maria Carolina Romero Carrasco, Anna Schmitt, and Lukas Perkhofer
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GSEA Analysis
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- 2023
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14. Figure S3 Tumour growth upon Olaparib and Gemcitabine Treatment in Allografts model from ATM Deficiency Generating Genomic Instability Sensitizes Pancreatic Ductal Adenocarcinoma Cells to Therapy-Induced DNA Damage
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Alexander Kleger, Pierre-Olivier Frappart, Hans Christian Reinhardt, Thomas Seufferlein, Bence Sipos, Lisa Wiesmüller, Martin Wagner, Jochen Gaedcke, Evelin Schröck, Laura Gieldon, Hana Algül, Marina Lesina, Hanibal Bohnenberger, Meike Hohwieler, Stefan Liebau, Qiong Lin, Ninel Azoitei, André Lechel, Ronan Russell, Elisabeth Hessmann, Dietrich Alexander Ruess, Stephanie Hampp, Michaela Ihle, Maria Carolina Romero Carrasco, Anna Schmitt, and Lukas Perkhofer
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Tumour growth upon Olaparib and Gemcitabine Treatment in Allografts model
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- 2023
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15. Synergistic targeting and resistance to PARP inhibition in DNA damage repair-deficient pancreatic cancer
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Hans A. Kestler, Alexander Kleger, Martin Wagner, Diane M. Simeone, Elodie Roger, Karolin Walter, Bruno Sainz, Johann Gout, Pierre Olivier Frappart, Martin Müller, Michaela Ihle, Thomas Seufferlein, André Lechel, Eva Rodriguez-Aznar, Katja Stifter, Johann M. Kraus, Sebastian Müller, Stefan Liebau, Stephanie Biber, Ninel Azoitei, Roland Rad, Mareen Morawe, Lisa Wiesmüller, Sebastian Lange, Andrea Zamperone, Patrick C. Hermann, Stephan A. Hahn, Elisabeth Hessmann, Lukas Perkhofer, Thomas Engleitner, Frank Arnold, Geography, Laboratory for Medical and Molecular Oncology, Basic (bio-) Medical Sciences, German Cancer Aid, German Research Foundation, Ulm University, Ministry for Science and Culture of Lower Saxony, and Deutsche Krebshilfe
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0301 basic medicine ,pancreatic tumours ,Epithelial-Mesenchymal Transition ,DNA Copy Number Variations ,DNA Repair ,Genotype ,Cell Survival ,DNA repair ,DNA damage ,Poly ADP ribose polymerase ,medicine.medical_treatment ,pancreatic cancer ,Drug Resistance ,gastroenterology ,Apoptosis ,Ataxia Telangiectasia Mutated Proteins ,Synthetic lethality ,Adenocarcinoma ,Poly(ADP-ribose) Polymerase Inhibitors ,Biology ,Targeted therapy ,Mice ,03 medical and health sciences ,0302 clinical medicine ,Cell Line, Tumor ,medicine ,Animals ,Humans ,Homologous Recombination ,Pancreas ,Drug Synergism ,Prognosis ,Drug Resistance, Multiple ,3. Good health ,Pancreatic Neoplasms ,Multiple drug resistance ,030104 developmental biology ,030220 oncology & carcinogenesis ,PARP inhibitor ,Cancer research ,Homologous recombination ,Carcinoma, Pancreatic Ductal - Abstract
© Author(s) (or their employer(s)) 2020., [Objective]: ATM serine/threonine kinase (ATM) is the most frequently mutated DNA damage response gene, involved in homologous recombination (HR), in pancreatic ductal adenocarcinoma (PDAC)., [Design]: Combinational synergy screening was performed to endeavour a genotype-tailored targeted therapy., [Results]: Synergy was found on inhibition of PARP, ATR and DNA-PKcs (PAD) leading to synthetic lethality in ATM-deficient murine and human PDAC. Mechanistically, PAD-induced PARP trapping, replication fork stalling and mitosis defects leading to P53-mediated apoptosis. Most importantly, chemical inhibition of ATM sensitises human PDAC cells toward PAD with long-term tumour control in vivo. Finally, we anticipated and elucidated PARP inhibitor resistance within the ATM-null background via whole exome sequencing. Arising cells were aneuploid, underwent epithelial-mesenchymal-transition and acquired multidrug resistance (MDR) due to upregulation of drug transporters and a bypass within the DNA repair machinery. These functional observations were mirrored in copy number variations affecting a region on chromosome 5 comprising several of the upregulated MDR genes. Using these findings, we ultimately propose alternative strategies to overcome the resistance., [Conclusion]: Analysis of the molecular susceptibilities triggered by ATM deficiency in PDAC allow elaboration of an efficient mutation-specific combinational therapeutic approach that can be also implemented in a genotype-independent manner by ATM inhibition., Main funding is provided by the German Cancer Aid grant to AK (111879). Additional funding came from the Deutsche Forschungsgemeinschaft (DFG) ’Sachbeihilfe’ (KL 2544/1–1, 1–2, 5–1, 7-1) and ’Heisenberg-Programm’ (KL 2544/6–1), the Baden-Württemberg-Foundation ExPoChip and the INDIMEDVerbund PancChip. AK, FA, MI, SB, LW and TS are either Principal Investigators or students of HEIST RTG funded by the DFG GRK 2254/1. AK is an Else-KrönerFresenius Excellence fellow. LP received funds by the Bausteinprogramm of Ulm University. PCH is supported by a Max Eder Fellowship of the German Cancer Aid (111746), a German Cancer Aid Priority Program ’Translational Oncology’ 70112505 and by a Collaborative Research Centre grant (316249678 – SFB 1279) of the German Research Foundation. EH received funding from the German Cancer Aid (PiPAC, 70112505) and the Volkswagenstiftung/Ministry for Science and Culture in Lower Saxony (ZN3222). This work was also supported by the Deutsche Forschungsgemeinschaft (AZ.96/1–3) to NA, by the Deutsche Krebshilfe (111264) to AL and by the German Cancer Aid Priority Program Translational Oncology (70112504) to LW.
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- 2021
16. Correction: Nbn and Atm Cooperate in a Tissue and Developmental Stage-Specific Manner to Prevent Double Strand Breaks and Apoptosis in Developing Brain and Eye.
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Paulo M. G. Rodrigues, Paulius Grigaravicius, Martina Remus, Gabriel R. Cavalheiro, Anielle L. Gomes, Maurício Rocha-Martins, Lucien Frappart, David Reuss, Peter J. McKinnon, Andreas von Deimling, Rodrigo A. P. Martins, and Pierre-Olivier Frappart
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Medicine ,Science - Published
- 2013
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17. Nbn and atm cooperate in a tissue and developmental stage-specific manner to prevent double strand breaks and apoptosis in developing brain and eye.
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Paulo M G Rodrigues, Paulius Grigaravicius, Martina Remus, Gabriel R Cavalheiro, Anielle L Gomes, Maurício Rocha-Martins, Lucien Frappart, David Reuss, Peter J McKinnon, Andreas von Deimling, Rodrigo A P Martins, and Pierre-Olivier Frappart
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Medicine ,Science - Abstract
Nibrin (NBN or NBS1) and ATM are key factors for DNA Double Strand Break (DSB) signaling and repair. Mutations in NBN or ATM result in Nijmegen Breakage Syndrome and Ataxia telangiectasia. These syndromes share common features such as radiosensitivity, neurological developmental defects and cancer predisposition. However, the functional synergy of Nbn and Atm in different tissues and developmental stages is not yet understood. Here, we show in vivo consequences of conditional inactivation of both genes in neural stem/progenitor cells using Nestin-Cre mice. Genetic inactivation of Atm in the central nervous system of Nbn-deficient mice led to reduced life span and increased DSBs, resulting in increased apoptosis during neural development. Surprisingly, the increase of DSBs and apoptosis was found only in few tissues including cerebellum, ganglionic eminences and lens. In sharp contrast, we showed that apoptosis associated with Nbn deletion was prevented by simultaneous inactivation of Atm in developing retina. Therefore, we propose that Nbn and Atm collaborate to prevent DSB accumulation and apoptosis during development in a tissue- and developmental stage-specific manner.
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- 2013
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18. A feedback-loop between telomerase activity and stemness factors regulates PDAC stem cells
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Lucas-Alexander Schulte, Mónica S. Ventura Ferreira, Mert Erkan, Thomas Seufferlein, Pierre Olivier Frappart, Tim H. Brümmendorf, Ninel Azoitei, Nora Daiss, Bruno Sainz, Frank Arnold, E. Tabarés, L. Lerma, Fabian Beier, Alexander Kleger, André Lechel, Patrick C. Hermann, Eva Rodriguez-Aznar, T. Dittrich, Kanishka Tiwary, Sabine Meessen, Karolin Walter, Valentyn Usachov, and Cagatay Günes
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Homeobox protein NANOG ,Telomerase ,SOX2 ,KLF4 ,Cancer stem cell ,Pancreatic cancer ,medicine ,Cancer research ,Biology ,Stem cell ,medicine.disease ,Telomere - Abstract
To date, it is still unclear how cancer stem cells (CSCs) regulate their stemness properties, and to what extent they share common features with normal stem cells. Telomerase regulation is a key factor in stem cell maintenance. In this study, we investigate how telomerase regulation affects cancer stem cell biology in pancreatic ductal adenocarcinoma (PDAC), and delineate the mechanisms by which telomerase activity and CSC properties are linked. Using primary patient-derived pancreatic cancer cells, we show that CSCs have higher telomerase activity and longer telomeres than bulk tumor cells. Inhibition of telomerase activity, using genetic TERT-knockdown or pharmacological inhibitor (BIBR1532) resulted in CSC marker depletion in vitro, and reduced tumorigenicity in vivo. Furthermore, we identify a positive feedback loop between stemness factors (KLF4, SOX2, OCT3/4, NANOG) and telomerase, which is essential for the self-renewal of pancreatic CSCs. Disruption the balance between telomerase activity and stemness factors, eliminates CSCs via induction of DNA damage and apoptosis, opening future perspectives to avoid CSC driven therapy resistance and tumor relapse in PDAC patients.
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- 2020
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19. Pancreatic Ductal Adenocarcinoma (PDAC) Organoids: The Shining Light at the End of the Tunnel for Drug Response Prediction and Personalized Medicine
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Thomas G. Hofmann and Pierre Olivier Frappart
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0301 basic medicine ,Oncology ,Cancer Research ,medicine.medical_specialty ,Pancreatic ductal adenocarcinoma ,endocrine system diseases ,FOLFIRINOX ,drug response ,Review ,chemotherapy ,lcsh:RC254-282 ,03 medical and health sciences ,0302 clinical medicine ,Internal medicine ,medicine ,Drug response ,Survival rate ,organoids ,Cause of death ,3D cell culture ,business.industry ,Cancer ,PDAC ,personalized medicine ,lcsh:Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,medicine.disease ,Gemcitabine ,digestive system diseases ,030104 developmental biology ,030220 oncology & carcinogenesis ,Personalized medicine ,business ,medicine.drug - Abstract
Simple Summary Pancreatic ductal adenocarcinoma (PDAC) causes massive medical problems because of late diagnosis and limited responsiveness to standard chemotherapeutic treatments. This makes PDAC one of the major causes of death by cancer. To address this problem, novel tools for early diagnosis and therapy are needed. The recent development of PDAC organoids, which represent micro-scale mini-tumors, offers promising new options for personalized drug-testing based on primary PDAC patient material. This overview article summarizes and discusses the current state-of-the-art in exploiting the organoid technology to improve clinical management of PDAC. Abstract Pancreatic ductal adenocarcinoma (PDAC) represents 90% of pancreatic malignancies. In contrast to many other tumor entities, the prognosis of PDAC has not significantly improved during the past thirty years. Patients are often diagnosed too late, leading to an overall five-year survival rate below 10%. More dramatically, PDAC cases are on the rise and it is expected to become the second leading cause of death by cancer in western countries by 2030. Currently, the use of gemcitabine/nab-paclitaxel or FOLFIRINOX remains the standard chemotherapy treatment but still with limited efficiency. There is an urgent need for the development of early diagnostic and therapeutic tools. To this point, in the past 5 years, organoid technology has emerged as a revolution in the field of PDAC personalized medicine. Here, we are reviewing and discussing the current technical and scientific knowledge on PDAC organoids, their future perspectives, and how they can represent a game change in the fight against PDAC by improving both diagnosis and treatment options.
- Published
- 2020
20. RINT1 Regulates SUMOylation and the DNA Damage Response to Preserve Cellular Homeostasis in Pancreatic Cancer
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Stephanie E. Weissinger, Elodie Roger, Konstantin M. J. Sparrer, Axel Fuerstberger, Frank Arnold, Lukas Perkhofer, Hans A. Kestler, Alexander Kleger, Heike Wiese, Pierre Olivier Frappart, Ninel Azoitei, Karolin Walter, Volker Rasche, Li Hao, Johann Gout, Sebastian Wiese, André Lechel, Ewa K. Kaminska, Jeanette Scheible, Thomas Seufferlein, Peter Möller, Caterina Prelli-Bozzo, and Thomas J. Ettrich
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0301 basic medicine ,Cancer Research ,Programmed cell death ,endocrine system diseases ,DNA Repair ,DNA damage ,SUMO protein ,Cellular homeostasis ,Mice, Nude ,Cell Cycle Proteins ,Mice, Transgenic ,Biology ,Cell fate determination ,Transcriptome ,Cohort Studies ,03 medical and health sciences ,Mice ,0302 clinical medicine ,Pancreatic cancer ,Cell Line, Tumor ,medicine ,Animals ,Homeostasis ,Humans ,Viability assay ,Sumoylation ,medicine.disease ,Pancreatic Neoplasms ,030104 developmental biology ,Oncology ,030220 oncology & carcinogenesis ,Cancer research ,Female ,Protein Processing, Post-Translational ,Carcinoma, Pancreatic Ductal ,DNA Damage - Abstract
Pancreatic ductal adenocarcinoma (PDAC) still presents with a dismal prognosis despite intense research. Better understanding of cellular homeostasis could identify druggable targets to improve therapy. Here we propose RAD50-interacting protein 1 (RINT1) as an essential mediator of cellular homeostasis in PDAC. In a cohort of resected PDAC, low RINT1 protein expression correlated significantly with better survival. Accordingly, RINT1 depletion caused severe growth defects in vitro associated with accumulation of DNA double-strand breaks (DSB), G2 cell cycle arrest, disruption of Golgi–endoplasmic reticulum homeostasis, and cell death. Time-resolved transcriptomics corroborated by quantitative proteome and interactome analyses pointed toward defective SUMOylation after RINT1 loss, impairing nucleocytoplasmic transport and DSB response. Subcutaneous xenografts confirmed tumor response by RINT1 depletion, also resulting in a survival benefit when transferred to an orthotopic model. Primary human PDAC organoids licensed RINT1 relevance for cell viability. Taken together, our data indicate that RINT1 loss affects PDAC cell fate by disturbing SUMOylation pathways. Therefore, a RINT1 interference strategy may represent a new putative therapeutic approach. Significance: These findings provide new insights into the aggressive behavior of PDAC, showing that RINT1 directly correlates with survival in patients with PDAC by disturbing the SUMOylation process, a crucial modification in carcinogenesis.
- Published
- 2020
21. Importance of organoids for personalized medicine
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Alexander Kleger, Pierre Olivier Frappart, Lukas Perkhofer, and Martin Müller
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0301 basic medicine ,Technology ,Lineage differentiation ,Cell Culture Techniques ,Computational biology ,Biology ,Models, Biological ,Mini review ,03 medical and health sciences ,0302 clinical medicine ,Biomimetic Materials ,Biomimetics ,Neoplasms ,Organoid ,Humans ,Precision Medicine ,Induced pluripotent stem cell ,Pharmacology ,business.industry ,Stem Cells ,Cell Differentiation ,General Medicine ,Embryonic stem cell ,Organoids ,030104 developmental biology ,030220 oncology & carcinogenesis ,Molecular Medicine ,Biological Assay ,Personalized medicine ,Stem cell ,business - Abstract
The establishment of organoid culture systems represents a milestone on the route toward successful personalized medicine. This mini review provides an update on the current status of organoid technology and summarizes their applications in personalized medicine. Organoids can be defined as 3D structures derived either from pluripotent or organ restricted stem cells harboring the ability to mimic in vivo architecture and multi lineage differentiation of terminally differentiated tissues. Due to their unique ability of virtually unlimited self-renewal, organoid cultures should be distinguished from previous ‘sphere’-culture assays, for example, ‘tumor spheres’ that have already been described and applied over the last decades.
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- 2018
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22. ATM Deficiency Generating Genomic Instability Sensitizes Pancreatic Ductal Adenocarcinoma Cells to Therapy-Induced DNA Damage
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Hans Christian Reinhardt, Stefan Liebau, Marina Lesina, Dietrich A. Ruess, Pierre Olivier Frappart, Stephanie Hampp, Thomas Seufferlein, André Lechel, Jochen Gaedcke, Lisa Wiesmüller, Qiong Lin, Bence Sipos, Laura Gieldon, Michaela Ihle, Ninel Azoitei, Hanibal Bohnenberger, Alexander Kleger, Martin Wagner, Hana Algül, Anna Schmitt, Evelin Schröck, Ronan Russell, Maria Carolina Romero Carrasco, Elisabeth Hessmann, Lukas Perkhofer, and Meike Hohwieler
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Male ,0301 basic medicine ,Genome instability ,Cancer Research ,endocrine system diseases ,DNA damage ,Poly ADP ribose polymerase ,Gene Expression ,Ataxia Telangiectasia Mutated Proteins ,Mice, SCID ,Synthetic lethality ,Biology ,medicine.disease_cause ,Deoxycytidine ,Genomic Instability ,Piperazines ,Olaparib ,Mice ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,medicine ,Animals ,Humans ,Cancer ,medicine.disease ,Immunohistochemistry ,Gemcitabine ,Molecular biology ,digestive system diseases ,3. Good health ,Pancreatic Neoplasms ,030104 developmental biology ,Oncology ,chemistry ,030220 oncology & carcinogenesis ,PARP inhibitor ,Cancer research ,Phthalazines ,Fluorouracil ,Carcinogenesis ,Carcinoma, Pancreatic Ductal ,DNA Damage - Abstract
Pancreatic ductal adenocarcinomas (PDAC) harbor recurrent functional mutations of the master DNA damage response kinase ATM, which has been shown to accelerate tumorigenesis and epithelial–mesenchymal transition. To study how ATM deficiency affects genome integrity in this setting, we evaluated the molecular and functional effects of conditional Atm deletion in a mouse model of PDAC. ATM deficiency was associated with increased mitotic defects, recurrent genomic rearrangements, and deregulated DNA integrity checkpoints, reminiscent of human PDAC. We hypothesized that altered genome integrity might allow synthetic lethality-based options for targeted therapeutic intervention. Supporting this possibility, we found that the PARP inhibitor olaparib or ATR inhibitors reduced the viability of PDAC cells in vitro and in vivo associated with a genotype-selective increase in apoptosis. Overall, our results offered a preclinical mechanistic rationale for the use of PARP and ATR inhibitors to improve treatment of ATM-mutant PDAC. Cancer Res; 77(20); 5576–90. ©2017 AACR.
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- 2017
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23. Pancreatic cancer-derived organoids – a disease modeling tool to predict drug response
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Reinhild Rösler, Lucas-Alexander Schulte, Johann Gout, Heike Wiese, Ralf Marienfeld, Patrick C. Hermann, Thomas Seufferlein, Martin Müller, Alica K Beutel, Thilo Hackert, André Lechel, Frank Arnold, Sebastian Wiese, Thomas J. Ettrich, Thomas F. E. Barth, Pierre Olivier Frappart, M. Svinarenko, Alexander Kleger, Bruno Sainz, Markus Breunig, Lukas Perkhofer, Karolin Walter, Mareen Morawe, German Cancer Aid, German Research Foundation, Research and Art Baden-Württemberg, Agence Nationale de la Recherche (France), Ulm University, The Hector Foundation, Ministerio de Economía y Competitividad (España), and Fundación Científica Asociación Española Contra el Cáncer
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Adult ,Male ,Pancreatic ductal adenocarcinoma ,endocrine system diseases ,Cell Survival ,Biopsy ,Cell Culture Techniques ,Antineoplastic Agents ,Disease ,Proof of Concept Study ,03 medical and health sciences ,Mice ,0302 clinical medicine ,Drug response prediction ,Pancreatic cancer ,medicine ,Organoid ,Drug response ,Animals ,Humans ,Pancreatic carcinoma ,skin and connective tissue diseases ,Pancreas ,business.industry ,Gastroenterology ,food and beverages ,Cancer ,PDAC ,Original Articles ,medicine.disease ,Primary cancer ,Xenograft Model Antitumor Assays ,digestive system diseases ,Pancreatic Neoplasms ,Organoids ,Oncology ,030220 oncology & carcinogenesis ,Cancer research ,Feasibility Studies ,030211 gastroenterology & hepatology ,Female ,Drug Screening Assays, Antitumor ,business ,Corrigendum ,Carcinoma, Pancreatic Ductal - Abstract
[Background]: Organotypic cultures derived from pancreatic ductal adenocarcinoma (PDAC) termed pancreatic ductal cancer organoids (PDOs) recapitulate the primary cancer and can be derived from primary or metastatic biopsies. Although isolation and culture of patient-derived pancreatic organoids were established several years ago, pros and cons for individualized medicine have not been comprehensively investigated to date., [Methods]: We conducted a feasibility study, systematically comparing head-to-head patient-derived xenograft tumor (PDX) and PDX-derived organoids by rigorous immunohistochemical and molecular characterization. Subsequently, a drug testing platform was set up and validated in vivo. Patient-derived organoids were investigated as well., [Results]: First, PDOs faithfully recapitulated the morphology and marker protein expression patterns of the PDXs. Second, quantitative proteomes from the PDX as well as from corresponding organoid cultures showed high concordance. Third, genomic alterations, as assessed by array-based comparative genomic hybridization, revealed similar results in both groups. Fourth, we established a small-scale pharmacotyping platform adjusted to operate in parallel considering potential obstacles such as culture conditions, timing, drug dosing, and interpretation of the results. In vitro predictions were successfully validated in an in vivo xenograft trial. Translational proof-of-concept is exemplified in a patient with PDAC receiving palliative chemotherapy., [Conclusion]: Small-scale drug screening in organoids appears to be a feasible, robust and easy-to-handle disease modeling method to allow response predictions in parallel to daily clinical routine. Therefore, our fast and cost-efficient assay is a reasonable approach in a predictive clinical setting., The authors disclosed receipt of the following financial support for the research, authorship, and/or publication of this article: Main funding is provided by the German Cancer Aid grant to A. Kleger (111879). Additional funding came from the Deutsche Forschungsgemeinschaft (DFG, K.L. 2544/1-1, and 1-2; GRK 2254/1 to T. Seufferlein), the BIU fund (Böhringer Ingelheim), the NDIMED-Verbund PancChip, and the Else-Kröner-Fresenius Memorial funding to A. Kleger. AK receives also funding from the DFG within the Heisenberg program and from the Baden-Württemberg Foundation via ExPo Chip. This project was also funded by ANR-DFG collaborative research project (ANR-18-CE92-0031, DFG KL 2544/5-1) to CJ and AK and via additional DFG funding KL 2544/6-1, KL 2544/7-1, KL 2544/1-1, and KL 2544/1-2 to AK. L. Perkhofer is funded by Bausteinprogramm of the Ulm University hospital. This work was supported by a project grant for André Lechel (Deutsche Krebshilfe/111264), for Patrick C. Hermann (Max Eder Fellowship 111746, Projektnummer 316249678 – SFB 1279, and Hector Foundation Cancer Research grant M65.1). Reinhild Rösler and parts of proteomics method development were funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) – SFB 1074. Bruno Sainz Jr was funded by a Ramón y Cajal Merit Award from the Ministerio de Economía y Competitividad, Spain and a coordinated grant from the Fundación Asociación Española Contra el Cáncer (AECC).
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- 2020
24. Precision medicine meets the DNA damage response in pancreatic cancer
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Alexander Kleger, Pierre Olivier Frappart, Lukas Perkhofer, Johann Gout, and Anett Illing
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therapy ,Cancer Research ,business.industry ,DNA damage ,pancreatic cancer ,MEDLINE ,medicine.disease ,DNA Damage Repair ,Precision medicine ,Editorial ,Text mining ,Oncology ,ATM ,Pancreatic cancer ,Cancer research ,DNA damage repair ,Medicine ,business - Published
- 2018
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25. Pancreatic Progenitors and Organoids as a Prerequisite to Model Pancreatic Diseases and Cancer
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Pierre Olivier Frappart, Meike Hohwieler, Martin Müller, and Sandra Heller
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Cell type ,lcsh:Internal medicine ,Enteroendocrine cell ,Cell Biology ,Review Article ,Biology ,medicine.disease_cause ,Embryonic stem cell ,Directed differentiation ,Cancer research ,medicine ,Stem cell ,Progenitor cell ,Induced pluripotent stem cell ,Carcinogenesis ,lcsh:RC31-1245 ,Molecular Biology - Abstract
Embryonic stem cells (ESCs) and induced pluripotent stem cells (iPSCs) are characterized by their unique capacity to stepwise differentiate towards any particular cell type in an adult organism. Pluripotent stem cells provide a beneficial platform to model hereditary diseases and even cancer development. While the incidence of pancreatic diseases such as diabetes and pancreatitis is increasing, the understanding of the underlying pathogenesis of particular diseases remains limited. Only a few recent publications have contributed to the characterization of human pancreatic development in the fetal stage. Hence, most knowledge of pancreatic specification is based on murine embryology. Optimizing and understanding current in vitro protocols for pancreatic differentiation of ESCs and iPSCs constitutes a prerequisite to generate functional pancreatic cells for better disease modeling and drug discovery. Moreover, human pancreatic organoids derived from pluripotent stem cells, organ-restricted stem cells, and tumor samples provide a powerful technology to model carcinogenesis and hereditary diseases independent of genetically engineered mouse models. Herein, we summarize recent advances in directed differentiation of pancreatic organoids comprising endocrine cell types. Beyond that, we illustrate up-and-coming applications for organoid-based platforms.
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- 2018
26. Epidermal Nbn deletion causes premature hair loss and a phenotype resembling psoriasiform dermatitis
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Pierre Olivier Frappart, Amir Abdollahi, Lucien Frappart, Paulius Grigaravicius, Michael Delacher, Martina Remus, Markus Feuerer, Philipp Seidel, Andreas von Deimling, and David E. Reuss
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0301 basic medicine ,skin ,Inflammation ,Cell Cycle Proteins ,Dermatitis ,Neuropathology ,03 medical and health sciences ,Mice ,0302 clinical medicine ,Research Paper: Gerotarget (Focus on Aging) ,Psoriasis ,Nbn ,medicine ,Animals ,Psoriasiform Dermatitis ,inflammation ,Gerotarget ,psoriasiform dermatitis ,Mice, Knockout ,business.industry ,Cancer ,Nuclear Proteins ,Alopecia ,Hair follicle ,medicine.disease ,DNA-Binding Proteins ,030104 developmental biology ,medicine.anatomical_structure ,Hair loss ,Phenotype ,Oncology ,030220 oncology & carcinogenesis ,Immunology ,medicine.symptom ,Epidermis ,Tumor Suppressor Protein p53 ,business ,Nijmegen breakage syndrome - Abstract
// Philipp Seidel 1,2 , Martina Remus 3 , Michael Delacher 4 , Paulius Grigaravicius 3 , David E. Reuss 5 , Lucien Frappart 6 , Andreas von Deimling 3,5 , Markus Feuerer 4 , Amir Abdollahi 1,2 and Pierre-Olivier Frappart 3 1 Molecular and Translational Radiation Oncology, National Center for Tumor Diseases (NCT), Heidelberg University Medical School (HUMS), Heidelberg, Germany 2 German Cancer Consortium (DKTK) and Heidelberg Institute of Radiation Oncology (HIRO), German Cancer Research Center (DKFZ), Heidelberg, Germany 3 Clinical Cooperation Unit Neuropathology, German Cancer Research Center (DKFZ), Heidelberg, Germany 4 Helmholtz Young Investigator Group Immune Tolerance, Tumor Immunology Program, German Cancer Research Center, Heidelberg, Germany 5 Department of Neuropathology, Institute of Pathology, Ruprecht-Karls-Universitat Heidelberg, Heidelberg, Germany 6 Leibniz Institute for Age Research - Fritz Lipmann Institute (FLI), Jena, Germany Correspondence to: Pierre-Olivier Frappart, email: // Keywords : inflammation, Nbn, psoriasiform dermatitis, skin, Gerotarget Received : February 17, 2016 Accepted : March 22, 2016 Published : March 30, 2016 Abstract Nijmegen Breakage Syndrome is a disease caused by NBN mutations. Here, we report a novel function of Nbn in skin homeostasis. We found that Nbn deficiency in hair follicle (HF) progenitors promoted increased DNA damage signaling, stimulating p16 Ink4a up-regulation, Trp53 stabilization and cytokines secretion leading to HF-growth arrest and hair loss. At later stages, the basal keratinocytes layer exhibited also enhanced DNA damage response but in contrast to the one in HF progenitor was not associated with pro-inflammatory cytokines expression, but rather increased proliferation, lack of differentiation and immune response resembling psoriasiform dermatitis. Simultaneous Nbn and Trp53 inactivation significantly exacerbated this phenotype, due to the lack of inhibition of pro-inflammatory cytokines secretion by Trp53. Altogether, we demonstrated novel functions of Nbn in HF maintenance and prevention of skin inflammation and we provide a mechanistic explanation that links cell intrinsic DNA maintenance with large scale morphological tissue alterations.
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- 2016
27. RINT1 functions as a multitasking protein at the crossroads between genomic stability, ER homeostasis, and autophagy
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Pierre Olivier Frappart, Paulius Grigaravicius, and Andreas von Deimling
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0301 basic medicine ,Genome instability ,Vesicular Transport Proteins ,Golgi Apparatus ,Biology ,Endoplasmic Reticulum ,Genomic Instability ,Mice ,03 medical and health sciences ,Autophagy ,medicine ,Animals ,Homeostasis ,Molecular Biology ,Progenitor ,Mice, Knockout ,Neurons ,Cell Death ,Qa-SNARE Proteins ,Stem Cells ,Tumor Suppressor Proteins ,Neurodegeneration ,Dyneins ,Neurodegenerative Diseases ,Dynactin Complex ,Genomics ,Cell Biology ,medicine.disease ,Embryonic stem cell ,Autophagic Punctum ,Acid Anhydride Hydrolases ,Cell biology ,DNA-Binding Proteins ,Protein Transport ,030104 developmental biology ,Unfolded protein response ,ATP-Binding Cassette Transporters ,Lysosomes ,Function (biology) - Abstract
RINT1 was first identified as an RAD50-interacting protein and its function was therefore linked to the maintenance of genomic stability. It was also shown that RINT1 was a key player in ER-Golgi trafficking as a member of an ER tethering complex interacting with STX18. However, due to early embryonic lethality of rint1-null mice, the in vivo functions of RINT1 remained for the most part elusive. We recently described the consequences of Rint1 inactivation in various neuronal cells of the central nervous system. We observed that lack of RINT1 in vivo triggers genomic instability and ER stress leading to depletion of the neural progenitor pool and neurodegeneration. Surprisingly, we also observed inhibition of autophagy in RINT1-deficient neurons, indicating an involvement of RINT1 in the regulation of neuronal autophagy. Here, we summarize our main RINT1 findings and discuss its putative roles in autophagy.
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- 2016
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28. ATR maintains select progenitors during nervous system development
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Eric J. Brown, Pierre Olivier Frappart, Youngsoo Lee, Peter J. McKinnon, Jingfeng Zhao, Helen R. Russell, Erin R.P. Shull, Vanessa Enriquez-Rios, and Sachin Katyal
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Nervous system ,General Immunology and Microbiology ,DNA damage ,Kinase ,General Neuroscience ,Neurogenesis ,DNA replication ,Biology ,General Biochemistry, Genetics and Molecular Biology ,Cell biology ,Ataxia Telangiectasia Mutated Proteins ,medicine.anatomical_structure ,medicine ,biological phenomena, cell phenomena, and immunity ,Molecular Biology ,Neural development ,Progenitor - Abstract
The ATR (ATM (ataxia telangiectasia mutated) and rad3related) checkpoint kinase is considered critical for signalling DNA replication stress and its dysfunction can lead to the neurodevelopmental disorder, ATR-Seckel syndrome. To understand how ATR functions during neurogenesis, we conditionally deleted Atr broadly throughout the murine nervous system, or in a restricted manner in the dorsal telencephalon. Unexpectedly, in both scenarios, Atr loss impacted neurogenesis relatively late during neural development involving only certain progenitor populations. Whereas the Atr-deficient embryonic cerebellar external germinal layer underwent p53- (and p16 Ink4a/Arf )-independent proliferation arrest, other brain regions suffered apoptosis that was partially p53 dependent. In contrast to other organs, in the nervous system, p53 loss did not worsen the outcome of Atr inactivation. Coincident inactivation of Atm also did not affect the phenotype after Atr deletion, supporting non-overlapping physiological roles for these related DNA damage-response kinases in the brain. Rather than an essential general role in preventing replication stress, our data indicate that ATR functions to monitor genomic integrity in a selective spatiotemporal manner during neurogenesis.
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- 2012
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29. Recurrent genomic alterations characterize medulloblastoma arising from DNA double-strand break repair deficiency
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Youngsoo Lee, Helen R. Russell, Yong Dong Wang, Kenji E. Orii, Suzanne J. Baker, Peter J. McKinnon, Naomi Kondo, Jingfeng Zhao, Nader Chalhoub, and Pierre Olivier Frappart
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Patched Receptors ,Genome instability ,DNA Ligases ,DNA Repair ,DNA repair ,Receptors, Cell Surface ,Biology ,Genomic Instability ,XRCC2 ,DNA Ligase ATP ,Mice ,Chromosome 19 ,medicine ,Animals ,DNA Breaks, Double-Stranded ,BRCA2 Protein ,Chromosome Aberrations ,Mice, Knockout ,Medulloblastoma ,Multidisciplinary ,Tumor Suppressor Proteins ,Biological Sciences ,medicine.disease ,DNA Repair-Deficiency Disorders ,Molecular biology ,Double Strand Break Repair ,DNA-Binding Proteins ,Patched-1 Receptor ,Cancer research ,Tumor Suppressor Protein p53 ,Homologous recombination - Abstract
Inactivation of homologous recombination (HR) or nonhomologous end-joining (NHEJ) predisposes to a spectrum of tumor types. Here, we inactivated DNA double-strand break repair (DSBR) proteins, DNA Ligase IV (Lig4), Xrcc2, and Brca2, or combined Lig4/Xrcc2 during neural development using Nestin-cre. In all cases, inactivation of these repair factors, together with p53 loss, led to rapid medulloblastoma formation. Genomic analysis of these tumors showed recurring chromosome 13 alterations via chromosomal loss or translocations involving regions containing Ptch1 . Sequence analysis of the remaining Ptch1 allele showed a variety of inactivating mutations in all tumors analyzed, highlighting the critical tumor suppressor function of this hedgehog-signaling regulator. We also observed genomic amplification or up-regulation of either N-Myc or cyclin D2 in all medulloblastomas. Additionally, chromosome 19, which contains Pten, was also selectively deleted in medulloblastoma arising after disruption of HR. Thus, our data highlight the preeminence of Ptch1 as a tumor suppressor in cerebellar granule cells and reveal other genomic events central to the genesis of medulloblastoma.
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- 2009
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30. Mouse models of DNA double-strand break repair and neurological disease
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Peter J. McKinnon and Pierre Olivier Frappart
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Cell cycle checkpoint ,DNA Repair ,DNA repair ,DNA damage ,Biology ,Models, Biological ,Biochemistry ,Article ,Mice ,chemistry.chemical_compound ,Animals ,Humans ,DNA Breaks, Double-Stranded ,Molecular Biology ,Neurodegenerative Diseases ,DNA ,Cell Biology ,G2-M DNA damage checkpoint ,Molecular biology ,Double Strand Break Repair ,Cell biology ,Non-homologous end joining ,Disease Models, Animal ,chemistry ,Models, Animal ,biological phenomena, cell phenomena, and immunity ,Homologous recombination - Abstract
The repair of DNA damage is essential for the prevention of disease. The DNA double-strand break (DSB) is a particularly hazardous lesion. DNA DSBs activate a coordinated cellular response involving cell cycle checkpoint activation and repair of the DNA break, or alternatively apoptosis. In the nervous system the inability to respond to DNA DSBs may lead to neurodegenerative disease or brain tumors. Therefore, understanding the DNA DSB response mechanism in the nervous system is of high importance for developing new treatments for neurodegeneration and cancer. In this regard, the use of mouse models represents an important approach for advancing our understanding of the biology of the DNA damage response in the nervous system.
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- 2008
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31. BRCA2 Function and the Central Nervous System
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Pierre Olivier Frappart and Peter J. McKinnon
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Central Nervous System ,Nervous system ,DNA Repair ,DNA repair ,Biology ,medicine.disease_cause ,chemistry.chemical_compound ,Fanconi anemia ,medicine ,Animals ,Humans ,neoplasms ,Molecular Biology ,BRCA2 Protein ,Neurogenesis ,Neurodegeneration ,Brain ,DNA ,Cell Biology ,medicine.disease ,medicine.anatomical_structure ,chemistry ,Cancer research ,Homologous recombination ,Carcinogenesis ,DNA Damage ,Developmental Biology - Abstract
Defective responses to DNA double strand breaks (DSBs) in the nervous system can lead to neurodegeneration or tumorigenesis. A key player in the repair of DNA DSBs is the tumor suppressor BRCA2, an essential component of the homologous recombination repair pathway and the Fanconi Anemia complex. We recently demonstrated that BRCA2 was required for normal neurogenesis and prevention of medulloblastoma brain tumors. Here, we discuss how this study contributes both to our understanding of BRCA2 functions in vivo, and the tissue-specific requirements for DNA repair and damage-signaling pathways.
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- 2007
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32. BRCA2 is required for neurogenesis and suppression of medulloblastoma
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Jayne Lamont, Peter J. McKinnon, Youngsoo Lee, and Pierre Olivier Frappart
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Nervous system ,DNA Repair ,DNA repair ,DNA damage ,Apoptosis ,Cell Cycle Proteins ,Ataxia Telangiectasia Mutated Proteins ,Protein Serine-Threonine Kinases ,medicine.disease_cause ,Article ,General Biochemistry, Genetics and Molecular Biology ,Histones ,Mice ,Fanconi anemia ,Cerebellum ,medicine ,Animals ,Gene Silencing ,Molecular Biology ,BRCA2 Protein ,General Immunology and Microbiology ,biology ,Tumor Suppressor Proteins ,General Neuroscience ,Neurogenesis ,medicine.disease ,Immunohistochemistry ,DNA-Binding Proteins ,Phenotype ,Histone ,medicine.anatomical_structure ,Karyotyping ,biology.protein ,Cancer research ,Tumor Suppressor Protein p53 ,Carcinogenesis ,Neural development ,Medulloblastoma - Abstract
Defective DNA damage responses in the nervous system can result in neurodegeneration or tumorigenesis. Despite the importance of DNA damage signalling, the neural function of many critical DNA repair factors is unclear. BRCA2 is necessary for homologous recombination repair of DNA and the prevention of diseases including Fanconi Anemia and cancer. We determined the role of BRCA2 during brain development by inactivating murine Brca2 throughout neural tissues. In striking contrast to early embryonic lethality after germ-line inactivation, Brca2(LoxP/LoxP);Nestin-cre mice were viable. However, Brca2 loss profoundly affected neurogenesis, particularly during embryonic and postnatal neural development. These neurological defects arose from DNA damage as Brca2(LoxP/LoxP);Nestin-cre mice showed extensive gammaH2AX in neural tissue and p53 deficiency restored brain histology but lead to rapid formation of medulloblastoma brain tumors. In contrast, loss of the Atm kinase did not markedly attenuate apoptosis after Brca2 loss, but did partially restore cerebellar morphology, supporting a genomic surveillance function for ATM during neurogenesis. These data illustrate the importance of Brca2 during nervous system development and underscore the tissue-specific requirements for DNA repair factors.
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- 2007
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33. Nibrin functions in Ig class-switch recombination
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Martin Digweed, Karl Sperling, Zhao-Qi Wang, Sven Kracker, Pierre Olivier Frappart, Yvonne Bergmann, Gabriele Hildebrand, Rainer Christine, Ilja Demuth, and Andreas Radbruch
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Lipopolysaccharides ,Transcription, Genetic ,DNA repair ,Cell Cycle Proteins ,Biology ,DNA-binding protein ,Mice ,medicine ,Animals ,Humans ,Gene ,Genetics ,B-Lymphocytes ,Multidisciplinary ,Nuclear Proteins ,Biological Sciences ,medicine.disease ,Immunoglobulin Switch Region ,Nibrin ,DNA-Binding Proteins ,Immunoglobulin class switching ,Gamma Rays ,Rad50 ,Immunoglobulin Constant Regions ,Nijmegen breakage syndrome ,Recombination - Abstract
Nijmegen breakage syndrome (NBS) is a rare autosomal recessive disorder characterized by predisposition to hematopoietic malignancy, cell-cycle checkpoint defects, and ionizing radiation sensitivity. NBS is caused by a hypomorphic mutation of the NBS1 gene, encoding nibrin, which forms a protein complex with Mre11 and Rad50, both involved in DNA repair. Nibrin localizes to chromosomal sites of class switching, and B cells from NBS patients show an enhanced presence of microhomologies at the sites of switch recombination. Because nibrin is crucial for embryonic survival, direct demonstration by targeted deletion that nibrin functions in class switch recombination has been lacking. Here, we show by cell-type-specific conditional inactivation of Nbn , the murine homologue of NBS1 , that nibrin plays a role in the repair of γ-irradiation damage, maintenance of chromosomal stability, and the recombination of Ig constant region genes in B lymphocytes.
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- 2005
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34. An inducible null mutant murine model of Nijmegen breakage syndrome proves the essential function of NBS1 in chromosomal stability and cell viability
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Zhang Qi Wang, Raymonda Varon, Pierre Olivier Frappart, Stephan Lobitz, Martin Digweed, Gabriele Hildebrand, Anna Melchers, Zdenko Herceg, Lars Stöckl, Ilja Demuth, and Karl Sperling
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DNA, Complementary ,Cell cycle checkpoint ,DNA Repair ,Cell Survival ,Cre recombinase ,Cell Cycle Proteins ,Chromosome Disorders ,Biology ,medicine.disease_cause ,Mice ,Viral Proteins ,Chromosomal Instability ,Chromosome instability ,Genetics ,medicine ,Animals ,Humans ,Molecular Biology ,Cells, Cultured ,Genetics (clinical) ,Sequence Deletion ,Mutation ,Integrases ,Cell Cycle ,Immunologic Deficiency Syndromes ,Nuclear Proteins ,Gene targeting ,Chromosome Breakage ,Syndrome ,General Medicine ,Fibroblasts ,medicine.disease ,Molecular biology ,Null allele ,Mice, Mutant Strains ,Nibrin ,DNA-Binding Proteins ,Disease Models, Animal ,Gene Targeting ,Nijmegen breakage syndrome - Abstract
The human genetic disorder, Nijmegen breakage syndrome, is characterized by radiosensitivity, immunodeficiency, chromosomal instability and an increased risk for cancer of the lymphatic system. The NBS1 gene codes for a protein, nibrin, involved in the processing/repair of DNA double strand breaks and in cell cycle checkpoints. Most patients are homozygous for a founder mutation, a 5 bp deletion, which might not be a null mutation, as functionally relevant truncated nibrin proteins are observed, at least in vitro. In agreement with this hypothesis, null mutation of the homologous gene, Nbn, is lethal in mice. Here, we have used Cre recombinase/loxP technology to generate an inducible Nbn null mutation allowing the examination of DNA-repair and cell cycle-checkpoints in the complete absence of nibrin. Induction of Nbn null mutation leads to the loss of the G2/M checkpoint, increased chromosome damage, radiomimetic-sensitivity and cell death. In vivo, this particularly affects the lymphatic tissues, bone marrow, thymus and spleen, whereas liver, kidney and muscle are hardly affected. In vitro, null mutant murine fibroblasts can be rescued from cell death by transfer of human nibrin cDNA and, more significantly, by a cDNA carrying the 5 bp deletion. This demonstrates, for the first time, that the common human mutation is hypomorphic and that the expression of a truncated protein is sufficient to restore nibrin's vital cellular functions.
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- 2004
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35. Poly(ADP-ribose) polymerase-1, a novel partner of progesterone receptors in endometrial cancer and its precursors
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Jean-Paul Roux, Lucien Frappart, Sadok Korbi, Zhao-Qi Wang, Wei-Min Tong, Pierre Olivier Frappart, Louis Marc Patricot, Moncef Mokni, Lina Ghabreau, and Patrice Mathevet
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Adult ,Male ,Cancer Research ,medicine.medical_specialty ,Poly ADP ribose polymerase ,Biology ,Endometrium ,medicine.disease_cause ,Downregulation and upregulation ,Internal medicine ,Progesterone receptor ,medicine ,Humans ,Neoplasm Invasiveness ,Receptor ,Atypical Endometrial Hyperplasia ,Aged ,Neoplasm Staging ,Aged, 80 and over ,Endometrial cancer ,Middle Aged ,medicine.disease ,Carcinoma, Papillary ,Cystadenocarcinoma, Serous ,Endometrial Neoplasms ,Endocrinology ,medicine.anatomical_structure ,Oncology ,Case-Control Studies ,Endometrial Hyperplasia ,Disease Progression ,Cancer research ,Female ,Poly(ADP-ribose) Polymerases ,Receptors, Progesterone ,Carcinogenesis ,Adenocarcinoma, Clear Cell - Abstract
Endometrial carcinomas are the most common malignancy of the female genital tract. Although the downregulation of the progesterone receptor (PR) in the progression of endometrioid carcinomas (ECs) has been well documented, the mechanism of PR alteration in endometrioid carcinogenesis is poorly understood. Recently, biochemical studies have shown that the DNA strand break-sensing molecule poly(ADP-ribose) polymerase (PARP-1) was associated with the DNA binding domain of PR. In our present study, we show that in normal endometrial epithelium, the expression level of PARP-1 protein is high in the proliferative phase but markedly decreases during the secretory phase. Interestingly, PARP-1 expression gradually increases in nonatypical and atypical endometrial hyperplasia, reaching its highest level in grade I, and decreases significantly toward grade III ECs. Notably, PARP-1 and PR expressions, in each stage, are positively correlated (p < 0.0001), with the exception of nonendometrioid carcinomas. Thus, these data suggest that PARP-1 is substantially involved in the regulation of progesterone action in the development of ECs. © 2004 Wiley-Liss, Inc.
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- 2004
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36. Nbn and atm cooperate in a tissue and developmental stage-specific manner to prevent double strand breaks and apoptosis in developing brain and eye
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Andreas von Deimling, Martina Remus, Peter J. McKinnon, Paulo M. G. Rodrigues, Gabriel R. Cavalheiro, Anielle L. Gomes, David E. Reuss, Pierre Olivier Frappart, Lucien Frappart, Mauricio R. Martins, Rodrigo A. P. Martins, and Paulius Grigaravicius
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Mouse ,Cellular differentiation ,Organogenesis ,lcsh:Medicine ,Apoptosis ,Cell Cycle Proteins ,Ataxia Telangiectasia Mutated Proteins ,Eye ,Biochemistry ,Mice ,Purkinje Cells ,Molecular cell biology ,Neural Stem Cells ,Cerebellum ,Homeostasis ,DNA Breaks, Double-Stranded ,lcsh:Science ,Genetics ,Neurons ,Multidisciplinary ,Stem Cells ,Brain ,Nuclear Proteins ,Cell Differentiation ,Animal Models ,Neural stem cell ,Cell biology ,DNA-Binding Proteins ,Nucleic acids ,Phenotype ,Neural development ,Research Article ,Histology ,Biophysics ,DNA repair ,Mice, Transgenic ,Biology ,Retina ,Prosencephalon ,Model Organisms ,medicine ,Animals ,Progenitor cell ,lcsh:R ,Epistasis, Genetic ,DNA ,medicine.disease ,Nibrin ,Ataxia-telangiectasia ,Genetics of Disease ,lcsh:Q ,Molecular Neuroscience ,Nijmegen breakage syndrome ,Developmental Biology ,Neuroscience - Abstract
Nibrin (NBN or NBS1) and ATM are key factors for DNA Double Strand Break (DSB) signaling and repair. Mutations in NBN or ATM result in Nijmegen Breakage Syndrome and Ataxia telangiectasia. These syndromes share common features such as radiosensitivity, neurological developmental defects and cancer predisposition. However, the functional synergy of Nbn and Atm in different tissues and developmental stages is not yet understood. Here, we show in vivo consequences of conditional inactivation of both genes in neural stem/progenitor cells using Nestin-Cre mice. Genetic inactivation of Atm in the central nervous system of Nbn-deficient mice led to reduced life span and increased DSBs, resulting in increased apoptosis during neural development. Surprisingly, the increase of DSBs and apoptosis was found only in few tissues including cerebellum, ganglionic eminences and lens. In sharp contrast, we showed that apoptosis associated with Nbn deletion was prevented by simultaneous inactivation of Atm in developing retina. Therefore, we propose that Nbn and Atm collaborate to prevent DSB accumulation and apoptosis during development in a tissue- and developmental stage-specific manner.
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- 2013
37. Conditional deletion of Nbs1 in murine cells reveals its role in branching repair pathways of DNA double-strand breaks
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Valérie Dumon-Jones, Zhao-Qi Wang, Pierre Olivier Frappart, Wookee Min, Christelle Barrucand, Jocelyne Michelon, Amal Saidi, Zdenko Herceg, and Yun-Gui Yang
- Subjects
DNA Repair ,DNA repair ,RAD51 ,DNA, Single-Stranded ,Cell Cycle Proteins ,Biology ,General Biochemistry, Genetics and Molecular Biology ,Article ,Cell Line ,Homology directed repair ,Mice ,MRE11 Homologue Protein ,Animals ,DNA Breaks, Double-Stranded ,Molecular Biology ,Ku Autoantigen ,Embryonic Stem Cells ,Cell Proliferation ,Sequence Deletion ,General Immunology and Microbiology ,Integrases ,single-stranded annealing ,homology-directed repair ,DNA double-strand break ,NBS1 ,nonhomologous end-joining ,General Neuroscience ,fungi ,Nuclear Proteins ,Antigens, Nuclear ,Fibroblasts ,Molecular biology ,Chromatin ,Acid Anhydride Hydrolases ,Non-homologous end joining ,DNA-Binding Proteins ,enzymes and coenzymes (carbohydrates) ,DNA Repair Enzymes ,MRN complex ,Rad50 ,Gene Targeting ,ATP-Binding Cassette Transporters ,Rad51 Recombinase ,biological phenomena, cell phenomena, and immunity - Abstract
NBS1 forms a complex with MRE11 and RAD50 (MRN) that is proposed to act on the upstream of two repair pathways of DNA double‐strand break (DSB), homologous repair (HR) and non‐homologous end joining (NHEJ). However, the function of Nbs1 in these processes has not fully been elucidated in mammals due to the lethal phenotype of cells and mice lacking Nbs1. Here, we have constructed mouse Nbs1‐null embryonic fibroblasts and embryonic stem cells, through the Cre‐loxP and sequential gene targeting techniques. We show that cells lacking Nbs1 display reduced HR of the single DSB in chromosomally integrated substrate, affecting both homology‐directed repair (HDR) and single‐stranded annealing pathways, and, surprisingly, increased NHEJ‐mediated sequence deletion. Moreover, focus formation at DSBs and chromatin recruitment of the Nbs1 partners Rad50 and Mre11 as well as Rad51 and Brca1 are attenuated in these cells, whereas the NHEJ molecule Ku70 binding to chromatin is not affected. These data provide a novel insight into the function of MRN in the branching of DSB repair pathways.
- Published
- 2006
38. Identification of differential gene expression in in vitro FSH treated pig granulosa cells using suppression subtractive hybridization
- Author
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Agnès Bonnet, Pierre Olivier Frappart, Gwenola Tosser-Klopp, François Hatey, P. Dehais, Laboratoire de Génétique Cellulaire (LGC), Institut National de la Recherche Agronomique (INRA)-Ecole Nationale Vétérinaire de Toulouse (ENVT), Institut National Polytechnique (Toulouse) (Toulouse INP), Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées-Institut National Polytechnique (Toulouse) (Toulouse INP), Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées, and St Jude Children's Research Hospital
- Subjects
Transcription, Genetic ,BANQUE SSH ,[SDV]Life Sciences [q-bio] ,Sus scrofa ,0302 clinical medicine ,Endocrinology ,Gene expression ,lcsh:Reproduction ,Genomic library ,PIGS ,Cells, Cultured ,Regulation of gene expression ,0303 health sciences ,Reverse Transcriptase Polymerase Chain Reaction ,Chromosome Mapping ,Nucleic Acid Hybridization ,Obstetrics and Gynecology ,Chromatin ,030220 oncology & carcinogenesis ,Receptors, FSH ,Female ,SSH LIBRARY ,GRANULOSA CELLS ,endocrine system ,DNA, Complementary ,lcsh:QH471-489 ,Sequence analysis ,Granulosa cell ,Biology ,lcsh:Gynecology and obstetrics ,CELLULES DE GRANULOSA ,03 medical and health sciences ,Animals ,TRANSCRIPTOMICS ,porcin ,Gene ,lcsh:RG1-991 ,Gene Library ,030304 developmental biology ,Gene Expression Profiling ,Research ,Sequence Analysis, DNA ,Blotting, Northern ,Molecular biology ,Gene Expression Regulation ,Reproductive Medicine ,Suppression subtractive hybridization ,Subtraction Technique ,Follicle Stimulating Hormone ,transcriptome ,Developmental Biology - Abstract
FSH, which binds to specific receptors on granulosa cells in mammals, plays a key role in folliculogenesis. Its biological activity involves stimulation of intercellular communication and upregulation of steroidogenesis, but the entire spectrum of the genes regulated by FSH has yet to be fully characterized. In order to find new regulated transcripts, however rare, we have used a Suppression Subtractive Hybridization approach (SSH) on pig granulosa cells in primary culture treated or not with FSH. Two SSH libraries were generated and 76 clones were sequenced after selection by differential screening. Sixty four different sequences were identified, including 3 novel sequences. Experiments demonstrated the presence of 25 regulated transcripts. A gene ontology analysis of these 25 genes revealed (1) catalytic; (2) transport; (3) signal transducer; (4) binding; (5) anti-oxidant and (6) structural activities. These findings may deepen our understanding of FSH's effects. Particularly, they suggest that FSH is involved in the modulation of peroxidase activity and remodelling of chromatin.
- Published
- 2006
- Full Text
- View/download PDF
39. Nbn heterozygosity renders mice susceptible to tumor formation and ionizing radiation-induced tumorigenesis
- Author
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Valérie, Dumon-Jones, Pierre-Olivier, Frappart, Wei-Min, Tong, Giangadharan, Sajithlal, Wolfgang, Hulla, Gerald, Schmid, Zdenko, Herceg, Martin, Digweed, and Zhao-Qi, Wang
- Subjects
Chromosome Aberrations ,Male ,Mice, Knockout ,Blastomeres ,Heterozygote ,Neoplasms, Radiation-Induced ,Nuclear Proteins ,Cell Cycle Proteins ,Neoplasms, Experimental ,DNA-Binding Proteins ,Mice, Inbred C57BL ,Disease Models, Animal ,Mice ,Pregnancy ,Mutation ,Animals ,Female ,Genetic Predisposition to Disease - Abstract
Nijmegen Breakage Syndrome (NBS) is a rare autosomal recessive disease characterized by microcephaly, growth retardation, immunodeficiency, chromosomal instability, and predisposition to cancer. Heterozygous NBS patients show increased chromosomal instability and are suspected to be at a high risk for cancer. To study the impact of NBS1 heterozygosity on malignancy susceptibility, we disrupted the murine homologue (Nbn) of NBS1 in mice using gene targeting techniques. While null mutation in the Nbn gene resulted in embryonic lethality at the blastocyst stage because of growth retardation and increased apoptosis, heterozygous knockout (Nbn(+/-)) mice developed a wide array of tumors affecting the liver, mammary gland, prostate, and lung, in addition to lymphomas. Moreover, gamma-irradiation enhanced tumor development in Nbn(+/-) mice, giving rise to a high frequency of epithelial tumors, mostly in the thyroid and lung, as well as lymphomas. These mice also developed numerous tumors in the ovary and testis. Southern and Western blot analyses showed a remaining wild-type allele and nibrin expression in Nbn(+/-) tumors. Sequencing analysis confirmed no mutation in the Nbn cDNA derived from these tumors. Cytogenetic analysis revealed that primary Nbn(+/-) embryonic fibroblasts and tumor cells exhibit increased chromosomal aberrations. These data suggest that haploinsufficiency, not loss of heterozygosity, of Nbn could be the mechanism underlying the tumor development. Taken together, our heterozygous Nbn-knockout mice represent a novel model to study the consequences of NBS1 heterozygosity on tumor development.
- Published
- 2003
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