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The trophic discrimination factor (TDF) is a key parameter for stable isotope analysis and due to a lack of species-specific TDFs, mean universal values have been used, resulting in uncertainties about the trophic position of species and a call for more experiments. In this study, we have addressed the lack of experimental species-specific TDFs conducting three experiments of 128 days each to determine the TDF (muscle and liver) of three species, the piscivore Pseudoplatystoma corruscans (Spix & Agassiz, 1829), and the omnivores Piaractus mesopotamicus (Holmberg, 1887) and Astyanax lacustris (Lütken, 1875), tropical fishes native to the La Plata River basin. Then, we calculated the trophic position (TP) using the mean universal TDF from literature and the species-specific TDF produced in this study for Pseudoplatystoma corruscans. We estimated the TDFs for the three species through experiment and the values found differed from the mean universal TDF in the literature. Moreover, the TP was lower when using the species-specific TDFs. The TP is important for several analyses, including its use in functional diversity. Therefore, we recommend using species-specific TDF values for calculating TP once it differs from the results calculated with mean universal TDF.

Food web research provides essential insights into ecosystem functioning, but practical applications in ecosystem-based management are hampered by a current lack of knowledge synthesis. To address this gap, we provide the first systematic review of ecological studies applying stable isotope analysis, a pivotal method in food web research, in the heavily anthropogenically impacted Baltic Sea macro-region. We identified a thriving research field, with 164 publications advancing a broad range of fundamental and applied research topics, but also found structural shortcomings limiting ecosystem-level understanding. We argue that enhanced collaboration and integration, including the systematic submission of Baltic Sea primary datasets to stable isotope databases, would help to overcome many of the current shortcomings, unify the scattered knowledge base, and promote future food web research and science-based resource management. The effort undertaken here demonstrates the value of macro-regional synthesis, in enhancing access to existing data and supporting strategic planning of research agendas. [ABSTRACT FROM AUTHOR]

Abstract Background Precise and accurate retrospective geolocation of marine predators via their tissues’ isotopic composition relies on quality reference maps of relevant isotopic gradients (“isoscapes”). Additionally, a good working knowledge of any discrimination factors that may offset a marine predator’s isotopic composition from baseline isotopic values, as well as tissue specific retention rates, are imperative. We provide a critical assessment of inter-specific differences among marine predator-level isoscapes within the Indian Sector of the Southern Ocean. Methods We combined fine-scale GPS tracking data and concurrent blood plasma δ13C and δ15N values of eight seabird species (three albatross, two giant petrel and three penguin species) breeding at Marion Island to produce species- and guild-specific isoscapes. Results Overall, our study revealed latitudinal spatial gradients in both δ13C and δ15N for far-ranging seabirds (albatrosses and giant petrels) as well as inshore-offshore gradients for near-ranging seabirds (penguins). However, at the species level, latitudinal spatial gradients were not reflected in the δ13C and δ15N isoscapes of two and three, respectively, of the five far-ranging species studied. It is therefore important when possible to estimate and apply species-specific isoscapes or have a good understanding of any factors and pathways affecting marine predators’ isotopic composition when estimating the foraging distribution of marine predators via their tissues’ stable isotope compositions. Conclusions Using a multi-species approach, we provide evidence of large and regional scale systematic spatial variability of δ13C and δ15N at the base of the marine food web that propagates through trophic levels and is reflected in the isotopic composition of top predators’ tissues.

Abstract Assessments of patterns of animal movements are important for understanding their spatial ecology. Geostatistical models of stable isotope (SI) landscapes (isoscapes) provide a complementary tool to telemetry for assessing and predicting animal movements, but are rarely applied to riverine species. Often single‐isotope gradients in freshwater environments are insufficiently variable to provide high isoscape resolution at relatively fine spatial scales. This is potentially overcome using dual‐isotope assignment procedures, and thus, the aim here was to apply single (δ13C) and dual (δ13C and δ15N) isoscapes to assigning riverine fish to origin and predicting their movements. Using the River Bure, England, as the study system, the foraging locations of a small‐bodied lowland river fish (roach Rutilus rutilus) of low vagility were predicted using their SI data and those of a common prey item (amphipods). These foraging locations were then compared to their capture locations, with the distance between these being their predicted displacement distance. The results indicated significant enrichment of δ13C and δ15N with distance downstream in roach fin tissue and amphipods; roach bivariate isotopic niches were spatially variable, with no niche overlap between upstream and downstream river reaches. Furthermore, the dual‐isoscape assignment procedure resulted in the lowest predicted displacement distances for roach, therefore enhancing model performance. The dual‐isoscape approach was then applied to determining the predicted displacement distance of individual common bream Abramis brama, a larger, more vagile species, with these data then compared against the subsequent spatial extent of their movements recorded by acoustic telemetry. When using a high probability density threshold for isotope assignment, the predicted displacement distance of common bream was a significant predictor of the spatial extent of their subsequent movements recorded by acoustic telemetry, although it was less able to predict the direction of displacement. This first probabilistic assignment to origin for riverine species using a dual‐isotope isoscape technique demonstrated that where the required spatial resolution of animal movements in freshwater is moderately broad (5–10 km), dual‐isotope isoscapes can provide a reliable alternative or complementary method to telemetry.

Assessments of patterns of animal movements are important for understanding their spatial ecology. Geostatistical models of stable isotope (SI) landscapes (isoscapes) provide a complementary tool to telemetry for assessing and predicting animal movements, but are rarely applied to riverine species. Often single‐isotope gradients in freshwater environments are insufficiently variable to provide high isoscape resolution at relatively fine spatial scales. This is potentially overcome using dual‐isotope assignment procedures, and thus, the aim here was to apply single (δ13C) and dual (δ13C and δ15N) isoscapes to assigning riverine fish to origin and predicting their movements. Using the River Bure, England, as the study system, the foraging locations of a small‐bodied lowland river fish (roach Rutilus rutilus) of low vagility were predicted using their SI data and those of a common prey item (amphipods). These foraging locations were then compared to their capture locations, with the distance between these being their predicted displacement distance. The results indicated significant enrichment of δ13C and δ15N with distance downstream in roach fin tissue and amphipods; roach bivariate isotopic niches were spatially variable, with no niche overlap between upstream and downstream river reaches. Furthermore, the dual‐isoscape assignment procedure resulted in the lowest predicted displacement distances for roach, therefore enhancing model performance. The dual‐isoscape approach was then applied to determining the predicted displacement distance of individual common bream Abramis brama, a larger, more vagile species, with these data then compared against the subsequent spatial extent of their movements recorded by acoustic telemetry. When using a high probability density threshold for isotope assignment, the predicted displacement distance of common bream was a significant predictor of the spatial extent of their subsequent movements recorded by acoustic telemetry, although it was less able to predict the direction of displacement. This first probabilistic assignment to origin for riverine species using a dual‐isotope isoscape technique demonstrated that where the required spatial resolution of animal movements in freshwater is moderately broad (5–10 km), dual‐isotope isoscapes can provide a reliable alternative or complementary method to telemetry. [ABSTRACT FROM AUTHOR]

Abstract With increasing biodiversity loss occurring worldwide, there is a need to understand how these losses will affect ecosystem structure and function. Biodiversity loss leads to changes in species interactions and alters the trophic complexity of food webs. These alterations to trophic complexity can be described by changes to the diversity of food resources and the diversity of trophic levels. To understand how biodiversity affects trophic complexity of food webs, we used 10 islands across the Aleutian Archipelago to compare the alternate state communities found in kelp forest ecosystems (kelp forest and urchin barren communities) and then compared these to natural reference communities without local benthic production (their associated offshore communities). We constructed food webs for each community across the Aleutian Archipelago using primary producer and consumer carbon (δ13C, a proxy for food sources to a consumer) and nitrogen (δ15N, a proxy for consumer trophic level) stable isotope values. Our findings suggest that biodiversity loss (i.e., phase change from kelp forest to urchin barren) leads to reductions in trophic complexity, which was similar to naturally occurring communities with low local resource biodiversity. This was expressed by lower consumer isotopic dietary niche areas, especially omnivores and herbivores, and lower omnivore and carnivore trophic levels within the urchin barren communities. We clarify how biodiversity promotes food resources and increases trophic levels and complexity through critical trophic conduits.

With increasing biodiversity loss occurring worldwide, there is a need to understand how these losses will affect ecosystem structure and function. Biodiversity loss leads to changes in species interactions and alters the trophic complexity of food webs. These alterations to trophic complexity can be described by changes to the diversity of food resources and the diversity of trophic levels. To understand how biodiversity affects trophic complexity of food webs, we used 10 islands across the Aleutian Archipelago to compare the alternate state communities found in kelp forest ecosystems (kelp forest and urchin barren communities) and then compared these to natural reference communities without local benthic production (their associated offshore communities). We constructed food webs for each community across the Aleutian Archipelago using primary producer and consumer carbon (δ13C, a proxy for food sources to a consumer) and nitrogen (δ15N, a proxy for consumer trophic level) stable isotope values. Our findings suggest that biodiversity loss (i.e., phase change from kelp forest to urchin barren) leads to reductions in trophic complexity, which was similar to naturally occurring communities with low local resource biodiversity. This was expressed by lower consumer isotopic dietary niche areas, especially omnivores and herbivores, and lower omnivore and carnivore trophic levels within the urchin barren communities. We clarify how biodiversity promotes food resources and increases trophic levels and complexity through critical trophic conduits. [ABSTRACT FROM AUTHOR]

Many successful invasive species have generalist diets, but the extent to which they can track changing resources has seldom been documented. Stable isotope analysis was used to measure dietary shifts with ontogeny and over time in relation to changes in prey availability for Indo-Pacific lionfish (Pterois sp.). These are invasive predators that are well established throughout the western North Atlantic and Caribbean where they have caused significant decreases in native reef fish populations in some areas. Samples and observations were made off New Providence Island, Bahamas during the summers of 2008 and 2010. Lionfish δ15N and δ13C values increased only weakly with body length, suggesting that processes other than growth also contribute to stable isotope variability. The trophic niche of lionfish changed significantly between years, concomitant with large changes in native fish prey abundance and community structure. The trophic niche of large lionfish expanded, increasing in trophic diversity at the population level and showing lower individual trophic similarity, while that of small lionfish remained similar in size but shifted towards more 15N-enriched and 13C-depleted prey sources. The ability of lionfish to modify their diet over time may have facilitated their expansion and persistence at high densities in some areas despite local prey depletion. [ABSTRACT FROM AUTHOR]

Abstract: The mean and variance of ecological variables are dependent on sampling attributes such as the coverage of environmental heterogeneity (sampling extent) and spatial scale. Trophic niche width is often approximated by bulk tissue stable isotopes of C and N, that is, the population isotopic niche. However, recent studies suggest that environmental heterogeneity (experienced by individuals) may be more important in defining the isotopic niche width than trophic variability. We hypothesised that isotopic niche width will increase monotonically with spatial scale, largely produced by environmental variation, for example, nutrient source. To refine this hypothesis, by describing the shapes of isotope scaling curves, we explored a previously published dataset describing three Chilean intertidal species representing different feeding guilds (grazing snails, suspension‐feeding mussel). We tested these hypotheses on a new, larger dataset describing three functionally analogous intertidal species from Northern Ireland. We generated isotopic variance–area curves from a spatially explicit bootstrap and investigated the scale dependency of environment–isotope relationships, including wave exposure and sub‐habitat heterogeneity. Spatial scale explained 50% of the variance in population isotopic niche widths (bivariate C‐N ellipse area) by simple, nonlinear relationships. Finer scales (<1–10 km lag) accounted for most variance. Scale dependence was strong for δ15N variance, of which >40% was explained by modelling linear coefficients. A δ15N baseline gradient, or isoscape, dominated δ15N variance scaling patterns, from sheltered, terrestrially influenced embayments to exposed, pelagic‐dominated coastline. Consumer δ13C variance had a weaker scale dependence, plateauing at mesoscales (>20 km lag). We show that isotopic niche width is strongly dependent on sampling spatial extent, which controls the environmental heterogeneity experienced by individual consumers. Environmental heterogeneity must be accounted for before isotopic niche width can be considered to accurately represent trophic niche width. Studies conducted at different spatial scales are likely to identify different environment–isotope relationships. We recommend that spatial scale should be incorporated into sampling designs explicitly, easiest by maintaining a consistent lag distance or area within which populations are sampled. Identified isoscapes can be de‐trended, where necessary. A plain language summary is available for this article. [ABSTRACT FROM AUTHOR]

The great diversity of the invertebrate community thriving in the deepest sections of the gypsum karst system of the Monte Conca sinkhole (Sicily, Italy) suggests the existence of a complex food web associated with a sulfidic pool and chemoautotrophic microbial activity. To shed light on the peculiarity of this biological assemblage, we investigated the species composition of the invertebrate community and surveyed trophic interactions by stable isotope analysis. The faunal investigation conducted by visual censuses and hand sampling methods led to the discovery of a structured biological assemblage composed of both subterranean specialized and non-specialized species, encompassing all trophic levels. The community was remarkably diverse in the sulfidic habitat and differed from other non-sulfidic habitats within the cave in terms of stable isotope ratios. This pattern suggests the presence of a significant chemoautotrophic support by the microbial communities to the local food web, especially during the dry season when the organic input from the surface is minimal. However, when large volumes of water enter the cave due to local agricultural activities (i.e., irrigation) or extreme precipitation events, the sulfidic habitat of the cave is flooded, inhibiting the local autotrophic production and threatening the conservation of the entire ecosystem.

Acanthurids (surgeonfishes) are an abundant and diverse group of herbivorous fishes on coral reefs. While their contribution to trophic linkages and dynamics in coral reef systems has received considerable attention, the role of linkages involving their parasites has not. As both consumers of fish tissue and prey to microcarnivores, external parasites may play a significant role in trophic transfer between primary consumers (and hence their predominantly algae-based diet) and the broader coral reef community. Stable isotope analysis is a common tool for studying trophic linkages which can be used for studies involving parasites. We examined the stable isotope ecology (13C and 15N) of copepod (Caligus atromaculatus) and monogenean (Neobenedenia sp.) ectoparasites collected from two species of Caribbean acanthurids (Acanthurus coeruleus and Acanthurus bahianus). There were significant intraspecific differences in isotope discrimination factors between parasites collected from the two different host species as well as interspecific differences between parasites collected from the same host species. Discrimination factors for 15N were consistently positive but varied in magnitude depending on host and parasite species and were slightly lower than what would be expected for consumers. The 13C discrimination factors for both monogeneans and copepods collected from A. coeruleus were consistently positive but were negative for copepods collected from A. bahianus. These findings emphasize the complexity of the stable isotope trophic interactions occurring between parasites and their hosts, highlighting the value of these types of host-parasite isotopic studies. [ABSTRACT FROM AUTHOR]

This article examines whether isotopes affect plant respiration. In the article, the authors show that short-term variations in isotopes of respiratory carbon dioxide under natural conditions may be as large as variations in photosynthesis, and may contain additional information about plant metabolic pathways that have not been fully explored. Photosynthetic discrimination causes plant material to be highly depleted in carbon relative to the atmosphere. It is possible to use atmospheric measurements to estimate the carbon isotope composition of ecosystem respiration at night when there is no photosynthetic uptake. Inherent in the interpretation of these measurements has been the assumption that discrimination against heavy isotopes during respiration is negligible such that the isotopic composition of respiration reflects the isotopic composition of the respiratory substrate. Early measurements of the isotopic composition of respiration showed a great deal of variability relative to substrates. It was also showed that the isotopic composition of carbon dioxide evolved from isolated plant protoplasts was similar to that of their sugar substrates. A simplified schematic of respiratory and biosynthetic pathways that lead to carbon dioxide evolution that is enriched versus depleted in carbon relative to sugars was presented in the article.