8 results on '"van Dongen, J.J."'
Search Results
2. The EuroClonality website: information, education and support on clonality testing
- Author
-
Rombout, P., Diss, T., Hodges, E., Hummel, M., van Dongen, J.J., Langerak, A.W., Groenen, P.J.T.A., Rombout, P., Diss, T., Hodges, E., Hummel, M., van Dongen, J.J., Langerak, A.W., and Groenen, P.J.T.A.
- Abstract
Item does not contain fulltext
- Published
- 2012
3. EuroClonality/BIOMED-2 guidelines for interpretation and reporting of Ig/TCR clonality testing in suspected lymphoproliferations
- Author
-
Langerak, A.W., Groenen, P.J.T.A., Bruggemann, M., Beldjord, K., Bellan, C., Bonello, L., Boone, E., Carter, G.I., Catherwood, M., Davi, F., Delfau-Larue, M.H., Diss, T., Evans, P.A., Gameiro, P., Garcia Sanz, R., Gonzalez, D., Grand, D., Hakansson, A., Hummel, M., Liu, H., Lombardia, L., Macintyre, E.A., Milner, B.J., Montes-Moreno, S., Schuuring, E., Spaargaren, M., Hodges, E., van Dongen, J.J., Langerak, A.W., Groenen, P.J.T.A., Bruggemann, M., Beldjord, K., Bellan, C., Bonello, L., Boone, E., Carter, G.I., Catherwood, M., Davi, F., Delfau-Larue, M.H., Diss, T., Evans, P.A., Gameiro, P., Garcia Sanz, R., Gonzalez, D., Grand, D., Hakansson, A., Hummel, M., Liu, H., Lombardia, L., Macintyre, E.A., Milner, B.J., Montes-Moreno, S., Schuuring, E., Spaargaren, M., Hodges, E., and van Dongen, J.J.
- Abstract
Item does not contain fulltext, PCR-based immunoglobulin (Ig)/T-cell receptor (TCR) clonality testing in suspected lymphoproliferations has largely been standardized and has consequently become technically feasible in a routine diagnostic setting. Standardization of the pre-analytical and post-analytical phases is now essential to prevent misinterpretation and incorrect conclusions derived from clonality data. As clonality testing is not a quantitative assay, but rather concerns recognition of molecular patterns, guidelines for reliable interpretation and reporting are mandatory. Here, the EuroClonality (BIOMED-2) consortium summarizes important pre- and post-analytical aspects of clonality testing, provides guidelines for interpretation of clonality testing results, and presents a uniform way to report the results of the Ig/TCR assays. Starting from an immunobiological concept, two levels to report Ig/TCR profiles are discerned: the technical description of individual (multiplex) PCR reactions and the overall molecular conclusion for B and T cells. Collectively, the EuroClonality (BIOMED-2) guidelines and consensus reporting system should help to improve the general performance level of clonality assessment and interpretation, which will directly impact on routine clinical management (standardized best-practice) in patients with suspected lymphoproliferations.
- Published
- 2012
4. Highly sensitive MRD tests for ALL based on the IKZF1 Delta3-6 microdeletion
- Author
-
Venn, N.C., Velden, V.H. van der, de Bie, M., Waanders, E., Giles, J.E., Law, T., Kuiper, R.P., de Haas, V., Mullighan, C.G., Haber, M., Marshall, G.M., Md, N., van Dongen, J.J., Sutton, R., Venn, N.C., Velden, V.H. van der, de Bie, M., Waanders, E., Giles, J.E., Law, T., Kuiper, R.P., de Haas, V., Mullighan, C.G., Haber, M., Marshall, G.M., Md, N., van Dongen, J.J., and Sutton, R.
- Abstract
Item does not contain fulltext
- Published
- 2012
5. The nuclear effector of wnt-signaling, tcf1, functions as a T-cell-specific tumor suppressor for development of lymphomas
- Author
-
Tiemessen, M.M., Baert, M.R., Schonewille, T., Brugman, M.H., Famili, F., Salvatori, D.C., Meijerink, J.P., Ozbek, U., Clevers, H., van Dongen, J.J., Staal, F.J., Tiemessen, M.M., Baert, M.R., Schonewille, T., Brugman, M.H., Famili, F., Salvatori, D.C., Meijerink, J.P., Ozbek, U., Clevers, H., van Dongen, J.J., and Staal, F.J.
- Abstract
The HMG-box factor Tcf1 is required during T-cell development in the thymus and mediates the nuclear response to Wnt signals. Tcf1(-/-) mice have previously been characterized and show developmental blocks at the CD4-CD8- double negative (DN) to CD4+CD8+ double positive transition. Due to the blocks in T-cell development, Tcf1(-/-) mice normally have a very small thymus. Unexpectedly, a large proportion of Tcf1(-/-) mice spontaneously develop thymic lymphomas with 50% of mice developing a thymic lymphoma/leukemia at the age of 16 wk. These lymphomas are clonal, highly metastatic, and paradoxically show high Wnt signaling when crossed with Wnt reporter mice and have high expression of Wnt target genes Lef1 and Axin2. In wild-type thymocytes, Tcf1 is higher expressed than Lef1, with a predominance of Wnt inhibitory isoforms. Loss of Tcf1 as repressor of Lef1 leads to high Wnt activity and is the initiating event in lymphoma development, which is exacerbated by activating Notch1 mutations. Thus, Notch1 and loss of Tcf1 functionally act as collaborating oncogenic events. Tcf1 deficiency predisposes to the development of thymic lymphomas by ectopic up-regulation of Lef1 due to lack of Tcf1 repressive isoforms and frequently by cooperating activating mutations in Notch1. Tcf1 therefore functions as a T-cell-specific tumor suppressor gene, besides its established role as a Wnt responsive transcription factor. Thus, Tcf1 acts as a molecular switch between proliferative and repressive signals during T-lymphocyte development in the thymus., The HMG-box factor Tcf1 is required during T-cell development in the thymus and mediates the nuclear response to Wnt signals. Tcf1(-/-) mice have previously been characterized and show developmental blocks at the CD4-CD8- double negative (DN) to CD4+CD8+ double positive transition. Due to the blocks in T-cell development, Tcf1(-/-) mice normally have a very small thymus. Unexpectedly, a large proportion of Tcf1(-/-) mice spontaneously develop thymic lymphomas with 50% of mice developing a thymic lymphoma/leukemia at the age of 16 wk. These lymphomas are clonal, highly metastatic, and paradoxically show high Wnt signaling when crossed with Wnt reporter mice and have high expression of Wnt target genes Lef1 and Axin2. In wild-type thymocytes, Tcf1 is higher expressed than Lef1, with a predominance of Wnt inhibitory isoforms. Loss of Tcf1 as repressor of Lef1 leads to high Wnt activity and is the initiating event in lymphoma development, which is exacerbated by activating Notch1 mutations. Thus, Notch1 and loss of Tcf1 functionally act as collaborating oncogenic events. Tcf1 deficiency predisposes to the development of thymic lymphomas by ectopic up-regulation of Lef1 due to lack of Tcf1 repressive isoforms and frequently by cooperating activating mutations in Notch1. Tcf1 therefore functions as a T-cell-specific tumor suppressor gene, besides its established role as a Wnt responsive transcription factor. Thus, Tcf1 acts as a molecular switch between proliferative and repressive signals during T-lymphocyte development in the thymus.
- Published
- 2012
6. Antibody deficiency due to a missense mutation in CD19 demonstrates the importance of the conserved tryptophan 41 in immunoglobulin superfamily domain formation.
- Author
-
Van Zelm, M., Smet, Julie, van der Burg, Maria, Ferster, Alina, Lê, Phu Quoc, Schandené, Liliane, Van Dongen, J.J., Mascart, Françoise, Van Zelm, M., Smet, Julie, van der Burg, Maria, Ferster, Alina, Lê, Phu Quoc, Schandené, Liliane, Van Dongen, J.J., and Mascart, Françoise
- Abstract
Immunoglobulin superfamily (IgSF) domains are conserved structures present in many proteins in eukaryotes and prokaryotes. These domains are well-capable of facilitating sequence variation, which is most clearly illustrated by the variable regions in immunoglobulins (Igs) and T cell receptors (TRs). We studied an antibody-deficient patient suffering from recurrent respiratory infections and with impaired antibody responses to vaccinations. Patient's B cells showed impaired Ca(2+) influx upon stimulation with anti-IgM and lacked detectable CD19 membrane expression. CD19 sequence analysis revealed a homozygous missense mutation resulting in a tryptophan to cystein (W52C) amino acid change. The affected tryptophan is CONSERVED-TRP 41 located on the C-strand of the first extracellular IgSF domain of CD19 and was found to be highly conserved, not only in mammalian CD19 proteins, but in nearly all characterized IgSF domains. Furthermore, the tryptophan is present in all variable domains in Ig and TR and was not mutated in 117 Ig class-switched transcripts of B cells from controls, despite an overall 10% amino acid change frequency. In vitro complementation studies and CD19 western blotting of patient's B cells demonstrated that the mutated protein remained immaturely glycosylated. This first missense mutation resulting in a CD19 deficiency demonstrates the crucial role of a highly conserved tryptophan in proper folding or stability of IgSF domains., Case Reports, Journal Article, Research Support, Non-U.S. Gov't, SCOPUS: ar.j, info:eu-repo/semantics/published
- Published
- 2011
7. CD81 gene defect in humans disrupts CD19 complex formation and leads to antibody deficiency.
- Author
-
Van Zelm, M., Smet, Julie, Adams, Brigitte, Mascart, Françoise, Schandené, Liliane, Janssen, Françoise, Ferster, Alina, Kuo, Chiung-Chi, Levy, Shoshana, Van Dongen, J.J., van der Burg, Maria, Van Zelm, M., Smet, Julie, Adams, Brigitte, Mascart, Françoise, Schandené, Liliane, Janssen, Françoise, Ferster, Alina, Kuo, Chiung-Chi, Levy, Shoshana, Van Dongen, J.J., and van der Burg, Maria
- Abstract
Antibody deficiencies constitute the largest group of symptomatic primary immunodeficiency diseases. In several patients, mutations in CD19 have been found to underlie disease, demonstrating the critical role for the protein encoded by this gene in antibody responses; CD19 functions in a complex with CD21, CD81, and CD225 to signal with the B cell receptor upon antigen recognition. We report here a patient with severe nephropathy and profound hypogammaglobulinemia. The immunodeficiency was characterized by decreased memory B cell numbers, impaired specific antibody responses, and an absence of CD19 expression on B cells. The patient had normal CD19 alleles but carried a homozygous CD81 mutation resulting in a complete lack of CD81 expression on blood leukocytes. Retroviral transduction and glycosylation experiments on EBV-transformed B cells from the patient revealed that CD19 membrane expression critically depended on CD81. Similar to CD19-deficient patients, CD81-deficient patients had B cells that showed impaired activation upon stimulation via the B cell antigen receptor but no overt T cell subset or function defects. In this study, we present what we believe to be the first antibody deficiency syndrome caused by a mutation in the CD81 gene and consequent disruption of the CD19 complex on B cells. These findings may contribute to unraveling the genetic basis of antibody deficiency syndromes and the nonredundant functions of CD81 in humans., Case Reports, Journal Article, Research Support, Non-U.S. Gov't, SCOPUS: ar.j, info:eu-repo/semantics/published
- Published
- 2010
8. Site-specific deletions involving the tal-1 and sil genes are restricted to cells of the T cell receptor alpha/beta lineage: T cell receptor delta gene deletion mechanism affects multiple genes
- Author
-
Breit, T.M., Mol, E.J., Wolvers-Tettero, I.L., Ludwig, W.D., van Wering, E.R., van Dongen, J.J., and MDC Library
- Subjects
Cancer Research ,Genetic Recombination ,Base Sequence ,Molecular Sequence Data ,Restriction Mapping ,Intracellular Signaling Peptides and Proteins ,570 Life Sciences ,Precursor Cell Lymphoblastic Leukemia-Lymphoma ,Polymerase Chain Reaction ,610 Medical Sciences, Medicine ,DNA-Binding Proteins ,Phenotype ,Proto-Oncogene Proteins ,Basic Helix-Loop-Helix Transcription Factors ,Neoplasm DNA ,T-Cell Antigen Receptors ,Southern Blotting ,Gene Deletion ,CD3 Antigens ,Fusion Oncogene Proteins ,Transcription Factors - Abstract
Site-specific deletions in the tal-1 gene are reported to occur in 12-26% of T cell acute lymphoblastic leukemias (T-ALL). So far two main types of tal-1 deletions have been described. Upon analysis of 134 T-ALL we have found two new types of tal-1 deletions. These four types of deletions juxtapose the 5' part of the tal-1 gene to the sil gene promoter, thereby deleting all coding sil exons but leaving the coding tal-1 exons undamaged. The recombination signal sequences (RSS) and fusion regions of the tal-1 deletion breakpoints strongly resemble the RSS and junctional regions of immunoglobulin/T cell receptor (TCR) gene rearrangements, which implies that they are probably caused by the same V(D)J recombinase complex. Analysis of the 134 T-ALL suggested that the occurrence of tal-1 deletions is associated with the CD3 phenotype, because no tal-1 deletions were found in 25 TCR-gamma/delta + T-ALL, whereas 8 of the 69 CD3- T-ALL and 11 of the 40 TCR-alpha/beta + T-ALL contained such a deletion. Careful examination of all TCR genes revealed that tal-1 deletions exclusively occurred in CD3- or CD3+ T-ALL of the alpha/beta lineage with a frequency of 18% in T-ALL with one deleted TCR-delta allele, and a frequency of 34% in T-ALL with TCR-delta gene deletions on both alleles. Therefore, we conclude that alpha/beta lineage commitment of the T-ALL and especially the extent of TCR-delta gene deletions determines the chance of a tal-1 deletion. This suggests that tal-1 deletions are mediated via the same deletion mechanism as TCR-delta gene deletions.
- Published
- 1993
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.