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For a long time, Dolichopoda palpata was the only species of this genus thought to live in the cave habitats of the Calabrian region. The results of our study, based on morphological and molecular data, highlight the existence of three species in the Calabria region. In particular, our data demonstrate the occurrence of two well-separated species, one in the northern Tyrrhenian area and one in the Calabrian Ionian area, attesting to the validity of D. calabra Galvagni 1968, and the discovery of a new species, D. apollinea sp. nov. Both species appear to be geographically very limited. Dolichopoda calabra occurs in the mountain region between Scalone Pass in the north and the Savuto Valley in the south (a district called 'Catena Costiera'), whereas D. apollinea sp. nov. appears to be distributed on the eastern slope of Pollino Massif. On the other hand, D. palpata shows a vast distribution, occurring in caves from La Sila in the north to the Aspromonte Massif in the extreme south of Calabria. About 1/3 of the Italian Dolichopoda species are present in this relatively small geographical area, supporting the importance of Calabria as a geographical region characterised by a high level of biodiversity. It shows the maximum values of genetic diversity and species richness in comparison with the rest of the Italian peninsula. This fact could be related to the palaeogeological and palaeoclimatic history of the region, as it was affected by glaciation events and eustatic movements. The combination of these two conditions that occurred during the Pliocene and Pleistocene transformed the Calabria into a vast archipelago of little islands, favouring the isolation of populations and the consequent speciation processes. [ABSTRACT FROM AUTHOR]

About 50 species of cave-obligate Leptodirini (Leiodidae) beetles have been described so far in Romania, most of them populating caves in the Apuseni Mountains (north-western Romania) and the Southern Carpathians. In this contribution, we present the first molecular phylogeographic study of the two troglobiotic Pholeuon species from the Apuseni Mountains. The two species are Pholeuon (s.str.) leptodirum and Pholeuon (Parapholeuon) gracile, endemic to Bihorului Mountains and Pădurea Craiului Mountains, respectively. To examine the genetic divergence within and between the two species we sequenced 571 bp of the mitochondrial COI gene in a total of 145 specimens, 56 specimens of the first species (collected in five caves) and 89 of the second species (collected in eight caves) across their geographic ranges. We found very low genetic variation, four haplotypes in P. leptodirum and seven haplotypes in P. gracile, and a maximum of 0.7% and 0.9% intraspecific divergence, respectively. However, a significant genetic divergence of 6.55% was found between species. The results are consistent with previous definitions of the two species based on morphological characters, while caution should be taken in considering attributions to different subspecies. Our research contributes to the phylogeographic information of troglobitic beetles, providing a solid basis for future comparison with other terrestrial or aquatic cave adapted species. [ABSTRACT FROM AUTHOR]

In mountain regions, climate change is resulting in glacial retreat, causing biodiversity loss in glacial‐fed streams (kryal habitat). Diamesa species (Diptera Chironomidae), the main colonizers of the kryal in the Alps, are the aquatic insects more threatened by extinction. In recent years, DNA barcoding was successfully adopted to delimit species of chironomids and provided species identification. We highlighted that for the Diamesa genus, inconsistencies remain between identification on a morphological and molecular basis, mainly within cinerella and zernyi groups, raising doubts about the validity of head colour as a good diagnostic taxonomic character. Molecular phylogeny reconstruction based on mitochondrial (cytochrome oxidase subunits I and II) and one nuclear (ribosomal 18S rRNA) markers revealed that D. bohemani and D. zernyi on one hand, and D. cinerella and D. tonsa on the other hand, represent populations of the same species. Divergence times suggested that the radiation of these alpine species seems to have been driven by the climatic events with the alternation of glacial periods that happened in the Pliocene and Pleistocene. The initial separation of the oriental species D. steinboecki seems to be due to the tectonic movements of the Periadriatic fault system that probably favoured the emergence of lakes and streams, successively colonized by D. steinboecki. This study raises important concerns, from the validity of diagnostic characters used today to identify larval types up to the uncertainty about how many species of Diamesa inhabit the European Alps and what their fate will be within the scenario of climate change. [ABSTRACT FROM AUTHOR]

• The molecular phylogeny of the cave crickets belonging to the Rhaphidophoridae was reconstructed. • The monophyly of each assayed subfamily were supported. • Rhaphidophoridae originated in the Cretaceous period during the Mesozoic era. • The ancestral area was located both in the northern and southern hemisphere. • Fragmentation of Gondwana and Laurasia played a role in the diversification process. We investigated the molecular phylogenetic divergence and historical biogeography of cave crickets belonging to the family Rhaphidophoridae (Orthoptera, Ensifera). We used taxa representative of most of the regions embraced by the family, considering samples of Macropathinae from Gondwana land (i.e., Tasmania, Australia, New Zealand, South Africa, and South America); Aemodogryllinae and Rhaphidophorinae from Southern-eastern Asia (i.e., India, Bhutan, China, Philippines and the Sulawesi islands); Dolichopodainae and Troglophilinae from the Mediterranean region and Ceuthophilinae from North America. Based on previous papers, we carried out an analysis of both mitochondrial and nuclear DNA sequences considering the ribosomal RNA units 12S, 16S, 18S, and 28S. To reconstruct phylogeny, we use cladistics, Maximum Likelihood (ML), and Bayesian analyses. All phylogenetic analyses showed the same highly supported topology generally congruent with the classical systematic arrangement at the level of each sub-family but strongly disagree with previous affinity hypotheses between sub-families based on morphological characters. Our results reveal a close affinity between Asiatic and Gondwanian taxa from one hand and between North American and Mediterranean ones from the other hand. Dating estimates indicated that Rhaphidophoridae originated in the Cretaceous period during the Mesozoic era with the ancestral area located both in the northern and southern hemisphere. A possible biogeographic scenario, reconstructed using S-DEC with RASP software, suggested that the current distribution of Rhaphidophoridae might be explained by a combination of both dispersal and vicariance events occurred especially in the ancestral populations. The radiation of Rhaphidophoridae started within the Pangaea, where the ancestor of Rhaphidophoridae occurred throughout an ancestral area including Australia, North America, and the Mediterranean region. The opening of the Atlantic Ocean promoted the divergence of North American and Mediterranean lineages while the differentiation of the southern lineages, spread from Australia, appears to be related to the fragmentation of Gondwana land. [ABSTRACT FROM AUTHOR]

The genus Bathysciola is widely distributed in the northern Mediterranean region, although its range extends east to the Caucasus and Iran. More than 130 species belonging to this genus are actually known in the whole geographic distribution area and 45 species are distributed in continental and insular Italy. The species belonging to the Bathysciola sisernica Cerruti and Patrizi, 1952 species group occur in the Central-Southern Italian Apennines and Pre-Apennines. This group consists of seven species, four of which (B. sisernica, B. delayi Latella and Rampini, 1994, B. rampinii Latella, 2002, B. sbordoni Rampini and Latella, 1993) were already known to science and three are described herein, Bathysciola fabiolae sp. nov., Bathysciola octaviani sp. nov., and Bathysciola valeriae sp. nov., markedly increasing the knowledge on the distribution of this genus in Central Italy. A morphological analysis was carried out based on diagnostic characters usually used to distinguish different taxa, and including both genitalia and external traits. Based on morphological characters, we reconstructed the phylogeny of this group of species, comparing them with the species belonging to other phyletic lineages, such as B. derosasi Jeannel, 1914, B. georgi Cerruti, Patrizi, 1952, B. vignai Sbordoni and Rampini, 1978, and B. sarteanensis sarteanensis (Bargagli, 1870). Results suggested that morphological traits show a clear taxonomic signal but a poor phylogenetic signal. To better understand the relationships within this group of species, we performed a molecular analysis by sequencing three mitochondrial genes, 12S rRNA, 16S rRNA, partially sequenced and the entire gene of COI. Molecular markers were used to infer phylogenetic relationships among the Bathysciola sisernica species group and to reconstruct the historical processes that shaped their current geographic distribution. Results showed that these species became isolated in very ancient times, showing very high genetic differentiation. [ABSTRACT FROM AUTHOR]

In this study, we investigated the molecular phylogenetic divergence and historical biogeography of cave crickets belonging to the genus Troglophilus (Orthoptera, Rhaphidophoridae) from caves in eastern Mediterranean and Anatolia regions. Three mitochondrial DNA genes ( COI, 12S rDNA, and 16S rDNA) and two nuclear ones ( 18S rDNA and 28S rDNA) were amplified and partially sequenced to reconstruct phylogenetic relationships among most of the known Troglophilus species. Results showed a well-resolved phylogeny with three main clades representing the Balkan, the Anatolian, and the Cycladian-Cretan lineages. Based on Bayesian analyses, we applied a relaxed molecular clock model to estimate the divergence times between these three lineages. Dating estimates indicate that radiation of the ingroup might have been triggered by the opening of the Mid-Aegean trench, while the uplift of the Anatolian Plateau in Turkey and the changes of relief, emergence, and disappearance of orographic and hydrographical barriers in the Balkan Peninsula are potential paleogeographic events responsible for the initial diversification of the genus Troglophilus. A possible biogeographic scenario, reconstructed using S- DIVA with RASP software, suggested that the current distribution of Troglophilus species can be explained by a combination of both dispersal and vicariance events that occurred in particular in the ancestral populations. The radiation of Troglophilus species likely started from the Aegean and proceeded eastward to Anatolia and westward to the Balkan region. Results are additionally compared to those available for Dolichopoda, the only other representative genus of Rhaphidophoridae present in the Mediterranean area. [ABSTRACT FROM AUTHOR]

In this paper, we studied the genetic variability in Weddell seal from colonies in Terra Nova Bay and Wood Bay, both sites located in the Ross Sea area, Antarctica. Two mitochondrial genes and one nuclear gene, with different mutation rates, were sequenced to investigate the haplotype diversity of the colonies and to test for a possible recent expansion. Fifteen microsatellites were used to analyze their genetic structure. Sequenced genes and microsatellites were also used to estimate the effective population size of the studied colonies and the Ross Sea seal population. The Ross Sea has a high density population of Weddel seals, with an estimated effective number of 50,000 females, and 1,341 individuals for the sampling area, possibly due to its high primary production. The colonies showed high diversity (Hd > 0.90) and many exclusive haplotypes (> 75%), likely a consequence of the surprisingly high site fidelity of Weddell seals, despite the proximity of the colonies. Nevertheless, there was low microsatellite differentiation between colonies, suggesting that they are part of a single larger population. Their expansion seemed to have started during the last glacial cycle (around 58,000 years ago), indicating that the Ross Sea seal populations have been present in the area for long time, probably due to the lack of hunting by humans and terrestrial predation. As a top predator, the role of Weddell seals in the Ross Sea ecology is crucial, and its demographic dynamics should be monitored to follow the future changes of such an important ecosystem. [ABSTRACT FROM AUTHOR]

The most stable isotope of radon, 222Rn, represents the major source of natural radioactivity in confined environments such as mines, caves and houses. In this study, we explored the possible radon-related effects on the genome of Dolichopoda cave crickets (Orthoptera, Rhaphidophoridae) sampled in caves with different concentrations of radon. We analyzed specimens from ten populations belonging to two genetically closely related species, D. geniculata and D. laetitiae, and explored the possible association between the radioactivity dose and the level of genetic polymorphism in a specific family of satellite DNA (pDo500 satDNA). Radon concentration in the analyzed caves ranged from 221 to 26000 Bq/m3. Specimens coming from caves with the highest radon concentration showed also the highest variability estimates in both species, and the increased sequence heterogeneity at pDo500 satDNA level can be explained as an effect of the mutation pressure induced by radon in cave. We discovered a specific category of nuclear DNA, the highly repetitive satellite DNA, where the effects of the exposure at high levels of radon-related ionizing radiation are detectable, suggesting that the satDNA sequences might be a valuable tool to disclose harmful effects also in other organisms exposed to high levels of radon concentration. [ABSTRACT FROM AUTHOR]

The genus Dolichopoda (Orthoptera; Rhaphidopohoridae) is present in Italy with 9 species distributed from northwestern Italy (Piedmont and Liguria) to the southernmost Apennines (Calabria), occurring also in the Tyrrhenian coastal areas and in Sardinia. Three morphologically very close taxa have been described in Piedmont and Liguria, i.e., D. ligustica ligustica, D. ligustica septentrionalis and D. azami azami. To investigate the delimitation of the northwestern species of Dolichopoda, we performed both morphological and molecular analyses. Morphological analysis was carried out by considering diagnostic characters generally used to distinguish different taxa, as the shape of epiphallus in males and the subgenital plate in females. Molecular analysis was performed by sequencing three mitochondrial genes, 12S rRNA, 16S rRNA, partially sequenced and the entire gene of COI. Results from both morphological and molecular analyses highlighted a very homogeneous group of populations, although genetically structured. Three haplogroups geographically distributed could be distinguished and based on these results we suggest a new taxonomic arrangement. All populations, due to the priority of description, should be assigned to D. azami azami Saulcy, 1893 and to preserve the names ligustica and septentrionalis, corresponding to different genetic haplogroups, we assign them to D. azami ligustica Baccetti & Capra, 1959, stat. n. and to D. azami septentrionalis Baccetti & Capra, 1959, stat. n. [ABSTRACT FROM AUTHOR]

Mediterranean trout populations display a diversity of phenotypes, representing a valuable model for the study of adaptation and a puzzling dilemma for taxonomists and biogeographers, which is further entangled by the widespread introgression of allochthonous genes. In this paper we analysed DNA polymorphism at multiple loci (sequence variation of the mitochondrial control region and eight nuclear fragments and length variation at eleven nuclear microsatellite loci) in representative samples of the autochthonous taxonomic diversity described in Italian trout populations ( Salmo marmoratus , S. carpio , S. cenerinus , S. cettii and S. fibreni ) and in samples from hatchery-originated strains of Atlantic S. trutta . We employed model-based clustering and Approximate Bayesian Computation in order to: (i) describe the phylogeographic structure of Italian autochthonous trout populations; (ii) evaluate a set of evolutionary/biogeographic models. The inclusion of hatchery-originated strains allowed to account for man-mediated allochthonous introgression in Italian populations. Our results (i) showed that the analysed sample consists of two main autochthonous evolutionary lineages, including the marble trout populations on one side (‘marble’ lineage) and the three peninsular populations of S. cettii , S. cenerinus and S. fibreni on the other side (‘peninsular’ lineage); (ii) indicated that S. carpio originated from a ‘peninsular’ population, with a possible, limited contribution from the ‘marble’ lineage; (iii) pointed out that the ‘marble’ lineage started diverging before the separation of the ‘peninsular’ lineage from Atlantic S. trutta ; (iv) suggested that a model of divergence involving gene flow from the ‘peninsular’ population into the ancestral gene pool of ‘marble’ trout is most consistent with the genetic data; (v) provided evidence that the autochthonous trout gene pools in the Tyrrhenian and Adriatic basins of the Italian peninsula started diverging very recently (most likely after the last glacial maximum). [ABSTRACT FROM AUTHOR]

Radon represents the major source of natural radioactivity in confined environments. Despite the clear evidence of a direct association between residential exposure and human lung cancer provided by case-control studies, results relating indoor exposure and genotoxic/mutagenic effect induction are still contradictory. The present study attempts to estimate the genotoxic effects induced by exposure to radioactive radon in wild cricket populations sampled from caves where varying concentrations of radon are present. Cave crickets are also tested as possible bio-indicator organisms of genotoxic potential of contaminated residential and confined environments. Six caves in Central Italy are considered covering a broad spectrum of radon radioactivity concentration (221-26,000 Bq/m3). Dolichopoda specimens were sampled from each cave; both haemocytes and brain cells taken from individuals were tested for responsiveness to DNA damage induced by radon through the Comet assay. Specimens from the least radioactive cave, housed in controlled conditions for 60 days before analysis, were used as control group. Statistically significant increase of DNA damage was found in all groups of individuals from each cave, for both cell types. Very low values of all Comet parameters were found in control group individuals, which gave indications of a good responsiveness of the organism to the variable environmental levels of radioactive contamination. Results indicate that cave crickets represent a reliable tool for the detection of genotoxic potential induced by radioactive contamination of confined environments and can be proposed as a possible bio-indicator system for air (-radioactive) pollution related to indoor exposure. [ABSTRACT FROM AUTHOR]

The genus Eupholidoptera includes 46 Mediterranean species distributed from Turkey to Greece, Italy and southern France. In the eastern part of its range, Eupholidoptera has been considered to consist of several distinct species, while in the Balkans and Italian peninsula only E. chabrieri has been recognized. However, the status of some Italian populations, confined to particular geographic areas, remains uncertain. To investigate the delimitation of the Italian taxa of Eupholidoptera, we performed both morphological and molecular analyses. Morphological analysis was carried out by considering diagnostic characters usually used to distinguish different taxa, such as the shape of titillators in males and the subgenital plate in females. Molecular analysis was performed by sequencing three mitochondrial genes: 12S r RNA, 16S r RNA, partially sequenced and the entire gene of cox1. Molecular markers were used to infer phylogenetic relationships among the Italian Eupholidoptera species and to reconstruct the historical processes that shaped their current geographic distribution. Results from both morphological and molecular analyses were used to revise the taxonomic arrangement of species. On the whole we were able to distinguish nine lineages of Italian Eupholidoptera, of which E. tyrrhenica sp.n. from Corsica is described as a new species. This published work has been registered in ZooBank, http://zoobank.org/urn:lsid:zoobank.org:pub:EBD181A0-5263-4880-AC80-66F624506E3A. [ABSTRACT FROM AUTHOR]

Two species of chironomid midges are currently described in the genus Belgica Jacobs, 1900. Belgica antarctica Jacobs, 1900 is endemic to parts of the maritime Antarctic, and Belgica albipes (Séguy, 1965) is endemic to Îles Crozet, a sub-Antarctic archipelago in the southern Indian Ocean. The relationships between these species, and their closest known relative ( Eretmoptera murphyi Schaeffer, 1914, endemic to sub-Antarctic South Georgia), were examined by sequencing DNA fragments for domains 1 and 3-5 of 28S ribosomal DNA and the mitochondrial gene cytochrome c oxidase 1 ( cox1). The resulting molecular relationships between the three species were unclear, although their position within the subfamily Orthocladiinae of the Chironomidae, as generated by classical taxonomy, was confirmed. Our data reinforce earlier doubts, based on classical morphological approaches, that the generic placement of E. murphyi may be incorrect. Further analyses may indeed confirm that the species represents a third member of the genus Belgica. Genetic distance analysis, limited to the barcode region of cox1, indicated high differentiation between the two populations of B. albipes sampled (one obtained from the type location), suggesting the likely presence of cryptic species within this taxon, and that the taxonomic status of this species should be revised. Analysis of cox1 sequences in B. antarctica highlighted a strong genetic structure between populations obtained from 12 locations along the Antarctic Peninsula and the South Shetland Islands archipelago, with a number of distinctive mtDNA lineages inhabiting geographically distinct areas. In particular, we found four different haplogroups constituting geographically close but genetically distinct populations, a pattern likely to have been encouraged by the brachyptery of the members of this genus. We suggest that the different genetic patterns shown by each haplogroup have probably been determined by historical dispersal and colonization events during the Pleistocene, and are consistent with their survival in refuges in situ during successive glacial maxima over this period. © 2012 The Linnean Society of London, Biological Journal of the Linnean Society, 2012, 106, 258-274. [ABSTRACT FROM AUTHOR]

Abstract: This study focuses on the phylogenetic relationships among ninety percent of known Dolichopoda species (44 out of 49); primarily a Mediterranean genus, distributed from eastern Pyrenees to Caucasus. A total of 2490 base pairs were sequenced corresponding to partial sequences of one nuclear (28SrRNA) and three mitochondrial genes (12S, 16S and COI). A relaxed molecular clock, inferred from Bayesian analysis was applied to estimate the divergence times between the lineages using well dated palaeoevents of the study areas. Molecular substitution rates per lineage per million years were also obtained for each analyzed gene. Based on the nearly complete species phylogeny, temporal patterns of diversification were analyzed using Lineage-Through-Time plots and diversification statistics. Alternative hypotheses about the colonization of present range by Dolichopoda species were tested by means of Approximate Bayesian Computation analysis. Results from this analysis carried out on the 90% of known Dolichopoda species confirmed the previous ones based on subgroups of species, suggesting the ABC analysis as a remarkable tool in biogeographic studies. Based on these results, the distribution of Dolichopoda species appears to have been shaped by the palaeogeographic and climatic events that occurred from Late Miocene up to the Plio-Pleistocene. Both vicariance and dispersal events appear to have influenced Dolichopoda species distributions, with many processes occurring in ancestral epigean populations before the invasion of the subterranean environment. [Copyright &y& Elsevier]

Abstract: This study focuses on the phylogenetic relationships among a number of West-Mediterranean cave crickets species belonging to Dolichopoda; primarily a Mediterranean genus, distributed from eastern Pyrenees to Caucasus. In this paper, 11 Dolichopoda species from the French Pyrenees (D. linderi), the island of Corsica (D. bormansi and D. cyrnensis), and northern, central, and southern Italy (D. ligustica, D. schiavazzii, D. aegilion, D. baccettii, D. laetitiae, D. geniculata, D. capreensis, and D. palpata) were studied. Two more species, one from the Caucasus, D. euxina, and one from Greece, D. remyi, were also included in the analyses, together with more distant species within the same family to be used as outgroups. Fifteen hundred base pairs of mitochondrial DNA, corresponding to the small subunit of the ribosomal RNA (16S rRNA) and to the subunit I of the cytochrome oxidase I (COI), were sequenced in order to clarify the phylogenetic relationships and biogeography of this group of Mediterranean cave crickets. The molecular data are congruent with a phylogeographic pattern; with the geographically close species also the most related ones. Based on mtDNA divergence, the present-day distribution of genetic diversity seems to have been impacted by climatic events due to glacial and interglacial cycles that have characterized the Pleistocene era. [Copyright &y& Elsevier]

Evidence of hybridization between 2 pairs of allopatric Dolichopoda species is provided by electrophoretic analysis. Occurrence of hybrids was revealed by laboratory crosses and in nature both by occasional co-existence due to passive dispersal and by transplantation experiments. [ABSTRACT FROM AUTHOR]