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Pteropods are a widespread group of holoplanktonic gastropod molluscs and are uniquely suitable for study of long-term evolutionary processes in the open ocean because they are the only living metazoan plankton with a good fossil record. Pteropods have been proposed as bioindicators to monitor the impacts of ocean acidification and in consequence have attracted considerable research interest, however, a robust evolutionary framework for the group is still lacking. Here we reconstruct their phylogenetic relationships and examine the evolutionary history of pteropods based on combined analyses of Cytochrome Oxidase I, 28S, and 18S ribosomal rRNA sequences and a molecular clock calibrated using fossils and the estimated timing of the formation of the Isthmus of Panama. Euthecosomes with uncoiled shells were monophyletic with Creseis as the earliest diverging lineage, estimated at 41–38 million years ago (mya). The coiled euthecosomes (Limacina, Heliconoides, Thielea) were not monophyletic contrary to the accepted morphology-based taxonomy; however, due to their high rate heterogeneity no firm conclusions can be drawn. We found strong support for monophyly of most euthecosome genera, but Clio appeared as a polyphyletic group, and Diacavolinia grouped within Cavolinia, making the latter genus paraphyletic. The highest evolutionary rates were observed in Heliconoides inflatus and Limacina bulimoides for both 28S and 18S partitions. Using a fossil-calibrated phylogeny that sets the first occurrence of coiled euthecosomes at 79–66 mya, we estimate that uncoiled euthecosomes evolved 51–42 mya and that most extant uncoiled genera originated 40–15 mya. These findings are congruent with a molecular clock analysis using the Isthmus of Panama formation as an independent calibration. Although not all phylogenetic relationships could be resolved based on three molecular markers, this study provides a useful resource to study pteropod diversity and provides general insight into the processes that generate and maintain their diversity in the open ocean. [ABSTRACT FROM AUTHOR]

An introduction to the journal is presented wherein the editor discusses various articles published within the issue on topics including the different facets of Charles Davies Sherbon as a man, scientist and bibliographer, tools and innovations for bringing legacy information into the modern age, and the future of biological nomenclature.

The List of Available Names in Zoology (LAN) is an inventory of names with specific scope in time and content, presented and approved in parts, and constituted as a cumulative index of names available for use in zoological nomenclature. It was defined in Article 79 in the fourth edition of the International Code of Zoological Nomenclature. The LAN is likely to gain importance with the development of the online Offi- cial Registry for Zoological Nomenclature (ZooBank) as it is potentially a source of many nomenclaturally certified names. Article 79 describes the deliberative process for adding large numbers of names to the LAN simultaneously, detailing steps and chronology for submission of a candidate Part to the LAN and consideration of a candidate Part by the public and Commission, but it is largely mute about the contents of a candidate Part. It does make clear that a name within the scope of a Part but not on the LAN has no nomenclatural standing, even if it had previously been considered available, thereby preventing long-forgotten names from displacing accepted ones and the accumulation of nomina dubia. Thus, for taxa on the LAN, nomenclatural archaeology -- the resurrecting of old unused names to replace by priority names in current usage -- will not be worthwhile. Beyond that, it has been unclear if Article 79 is intended to document every available name known within the scope of the Part, or if its intention is to pare the inventory of available names within the scope of the Part. Consideration by the Commission and two committees to deal with the LAN have defined steps to implement Article 79 with the latter intent. Procedures for consideration of a candidate Part are defined in a manual, published as an appendix in this volume. [ABSTRACT FROM AUTHOR]

The article presents topics of relevance to editors based on mentions of editors in International Code of Zoological Nomenclature as well as experience of enquiries received by the International Commission on Zoological Nomenclature (ICZN) Secretariat. Topics discussed include the remit of the ICZN, how should zoological names be written, the type specimens for, the difference between availability and validity of names, the status of ZooBank and registration, the status of the ICZN ruling on electronic-only publication of nomenclature acts.

The International Commission of Zoological Nomenclature has used the Scratchpads platform (currently being developed and maintained by ViBRANT) as the foundation for its redesigned website and as a platform for engaging with its users. The existing Scratchpad tools, with extensions to provide additional functions, have allowed for a major transformation in presentation of linked nomenclatural tools. Continued development of the new website will act as a springboard for the ICZN to participate more fully in the wider community of biodiversity informatics. [ABSTRACT FROM AUTHOR]

Summary 1. Ecologists continue to debate whether the assembly of communities of species is more strongly influenced by dispersal limitations or niche-based factors. Analytical approaches that account for both mechanisms can help to resolve controls of community assembly. 2. We compared littoral snail assemblages in Lake Tanganyika at three different spatial scales (5-25 m, 0.5-10 km and 0.5-27 km) to test whether spatial distance or environmental differences are better predictors of community similarity. 3. At the finest scale (5-25 m), snail assemblages shifted strongly with depth but not across similar lateral distances, indicating a stronger response to environmental gradients than dispersal opportunities. 4. At the two larger scales (0.5-27 km), both environmental similarity and shoreline distance between sites predicted assemblage similarity across sites. Additionally, canonical correspondence analysis revealed that snail abundances were significantly correlated with algal carbon-to-nitrogen ratio and wave energy. 5. Our results indicate that the factors governing assemblage structure are scale dependent; niche-based mechanisms act across all spatial scales, whereas community similarity declines with distance only at larger spatial separations. [ABSTRACT FROM AUTHOR]

Exceptional ecological niche diversity, clear waters and unique divergent selection pressures have often been invoked to explain high morphological and genetic diversity of taxa within ancient lakes. However, it is possible that in some ancient lake taxa high diversity has arisen because these historically stable environments have allowed accumulation of lineages over evolutionary timescales, a process impossible in neighbouring aquatic habitats undergoing desiccation and reflooding. Here we examined the evolution of a unique morphologically diverse assemblage of thiarid gastropods belonging to the Melanoides polymorpha‘complex’ in Lake Malawi. Using mitochondrial DNA sequences, we found this Lake Malawi complex was not monophyletic, instead sharing common ancestry with Melanoides anomala and Melanoides mweruensis from the Congo Basin. Fossil calibrations of molecular divergence placed the origins of this complex to within the last 4 million years. Nuclear amplified fragment length polymorphism markers revealed sympatric M. polymorpha morphs to be strongly genetically differentiated lineages, and males were absent from our samples indicating that reproduction is predominantly parthenogenetic. These results imply the presence of Lake Malawi as a standing water body over the last million years or more has facilitated accumulation of clonal morphological diversity, a process that has not taken place in more transient freshwater habitats. As such, the historical stability of aquatic environments may have been critical in determining present spatial distributions of biodiversity. [ABSTRACT FROM AUTHOR]

In this study we report the first animal invasion, to our knowledge, into Lake Malawi. The colonizer is a non-native morph of the gastropod Melanoides tuberculata that differs substantially in external shell characters from co-occurring indigenous forms. However, because the species possesses extensive within-Africa geographical variation in shell morphology, it was unclear whether the invasion was range expansion of a native African morph, or a colonization from elsewhere. Mitochondrial DNA sequences indicate a southeast Asian origin for the invader, suggesting that shell variation found among indigenous allopatric populations camouflaged an intercontinental invasion. [ABSTRACT FROM AUTHOR]

A thiarid gastropod, Vinundu westae new genus and new species, is described from Lake Tanganyika, and the species Nassopsis guillemei Martel & Dautzenberg, 1899 is transferred to this new genus from Edgaria (= Lavigeria). The shell of Vinundu has equal axial and spiral macrosculpture, producing characteristic regular nodes at the sculptural intersections. Reproduction in Vinundu is oviparous, in contrast to the ovoviviparous habit of its sister group, Lavigeria. Radular teeth and isotope values indicate that this is a grazer. Vinundu species are readily distinguished from their sister clade Lavigeria by conchological, anatomical and molecular characters. The two Vinundu species are common in deep water, rocky habitats of this clear-water, ancient lake. [ABSTRACT FROM AUTHOR]

In the study of gastropod shell morphology, determination of comparable ontogenetic stages is crucial, because all the states that various shell features go through during ontogeny are preserved on the shell. The protoconch/teleoconch transition and marks of episodic growth are among the few ways of defining discrete, comparable, growth stages. In gastropods with determinate growth the attainment of adulthood may provide additional shell markers permitting comparison among individuals and taxa. Adulthood is reflected in shell morphology in ways as diverse as shell deposition covering all the previous whorls and radically changing the shape of the shell through to slight changes in the trajectory of the suture. While the very prominent adulthood-related changes of shell morphology have been used as systematic characters, the more moderate changes have not been studied in detail and their potential systematic value has been ignored. In this paper we give a detailed account of adult modifications of the shell appearing with cessation of growth. Our study group comprises eight closely related species of Lavigeria from Lake Tanganyika. We show that the ways adulthood is manifested are quite diverse. We describe eight characters of the aperture, the suture and the sculptural ornamentation. Character occurrence varies greatly among species. We show that characters appear in suites and that in many cases their appearance is connected to size. We use size as a proxy for adulthood and test whether character occurrence alone or its connection to size can help resolve species relationships. In both cases our characters confirm the monophyly of our ingroup and yield cladograms with various degrees of resolution of ingroup relationships. The coding method that yields the greater character congruence is the one that takes into consideration the connection between appearance of a character and size. This study demonstrates that ontogenetically correlated character transformations may nevertheless be phylogenetically independent. © 2004 The Linnean Society of London, Zoological Journal of the Linnean Society, 2004, 140, 223−240. [ABSTRACT FROM AUTHOR]

Current estimates of species richness within rapidly evolving species flocks are often highly dependent on the species status of allopatric populations that differ in phenotypic traits. These traits may be unreliable indicators of biological species status and systematists may have inconsistently assigned species among lineages or locations on the basis of these traits, thus hampering comparative studies of regional species richness and speciation rates. Our aim was to develop a method of generating standardized estimates of regional species richness suitable for comparative analysis, and to use these estimates to examine the extent and consistency of species assignment of allopatric populations within rapidly evolving cichlid fish flocks present in three east African lakes. Lakes Malawi, Victoria and Tanganyika. Using published taxon co-occurrence data, a novel approach was employed to calculate standardized ‘minimum’ estimates of regional species richness for hard substrate associated complexes of cichlids within each of the lakes. Minimum estimates were based on an explicit assumption that if taxa present on equivalent habitats have disjunct distributions, then they are allopatric forms of the same species. These estimates were compared with current observed ‘high-end’ regional species richness estimates for those complexes to determine the consistency of species assignment of allopatric populations between lineages within a lake. A ‘sympatry’ index was developed to enable comparisons of levels of species assignment of allopatric populations between-lakes to be made. Within each lake, the minimum and high-end estimates for species richness were significantly correlated across complexes, indicating that the complexes that contain more recognized species contain the most genuine biological species. However, comparisons of complexes among lakes revealed considerable differences. For equivalent geographical areas, substantially higher proportions of recognized species were totally allopatric within the studied Lake Malawi and Lake Victoria complexes, than those of Lake Tanganyika. Among African lakes, levels of assignment to species status of allopatric populations were found to be distinctly different. It is unclear whether the discrepancies are a consequence of differences between the lake faunas in degrees of phenotypic divergence among allopatric populations, or are simply the result of inconsistent taxonomic practices. In either case, these results have considerable wider relevance for they emphasize that quantitative measures of regional and beta diversity are critically dependent on the species status of allopatric populations, an issue usually neglected in comparative studies of species richness. The technique introduced here can be used to standardize measures of regional diversity of lineages for comparative analyses, potentially enabling more accurate identification of processes influencing rates of speciation. [ABSTRACT FROM AUTHOR]

The article offers information on the BioCode of the International Commission on Zoological Nomenclature (ICZN) and calls for input in improving the draft.

The article discusses the proposed amendment of the International Code of Zoological Nomenclature (ICZN). Based on the resolution presented at the 30th General Assembly of International Union of Biological Science (IUBS) on October 11, 2009, the principles behind the proposal have been approved by the General Assembly for the modification of publication. The amendment needs the final approval by ICZN and will be referred to the Officers of the IUBS for endorsement and subsequent implementation.

Abstract: Sponges are a conspicuous element in many benthic habitats including in Africa’s oldest, deepest lake, Lake Tanganyika. Despite their prevalence and pivotal ecological role as filter feeders, knowledge of the evolutionary history of sponges is in its infancy. Here, we provide the first molecular analysis targeting the evolution of sponges from Lake Tanganyika. Independent markers indicate the occurrence of several colonisation events which have shaped the current Tanganyikan lacustrine sponge biodiversity. This is in contrast to a range of previously studied organisms that have diversified within the lake from single lineages. Our tree reconstructions indicate the presence of two genera, Oncosclera and Eunapius, which are globally distributed. Therefore, we reject the hypothesis of monophyly for the sponges from Lake Tanganyika and challenge existing higher taxonomic structure for freshwater sponges. [Copyright &y& Elsevier]