17 results on '"Robyn L. Prueitt"'
Search Results
2. Systematically evaluating and integrating evidence in National Ambient Air Quality Standards reviews
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Julie E. Goodman, Robyn L. Prueitt, Raymond D. Harbison, and Giffe T. Johnson
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National Ambient Air Quality Standards ,Systematic review ,Causal framework ,Study quality ,Infectious and parasitic diseases ,RC109-216 - Abstract
As part of the review process for the National Ambient Air Quality Standards (NAAQS), the United States Environmental Protection Agency (US EPA) conducts systematic reviews and assesses causal relationships between air pollutant exposures and human health effects using a framework it developed specifically for this purpose. We demonstrate how this framework could be improved by adding transparent criteria for assessing study quality, as well as detailed methods for integrating evidence in a way that fully and systematically considers individual study quality and relevance, and the coherence of results across studies within and across scientific disciplines. For example, the framework can include not just a list of study quality aspects for evaluating human and animal studies, but also aspects for evaluating in vitro studies. In addition, for all realms of evidence, the framework can specify the criteria for each study quality aspect that must be met to demonstrate that a study is of high quality. These aspects can be considered in a transparent and systematic fashion for each study, with the quality evaluations forming the basis for weighing evidence as it is integrated within and across disciplines, and ultimately for reaching conclusions regarding causality. The human relevance of experimental evidence can also be considered, particularly with respect to studies that evaluate upstream events vs. apical effects, and to how informative these studies are for interpreting epidemiology study results. As it is the goal of all regulations, including the NAAQS, to be based on sound science, these additions to the NAAQS systematic review and casual determination framework will make NAAQS causality assessments more transparent and reflective of the scientific evidence, and will allow for scientifically defensible decision-making. The modified framework can also be applied to systematic reviews of other substances by risk assessors and regulatory agencies around the world.
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- 2020
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3. Dermal exposure to toluene diisocyanate and respiratory cancer risk
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Robyn L. Prueitt, Heather N. Lynch, Ke Zu, Liuhua Shi, and Julie E. Goodman
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Environmental sciences ,GE1-350 - Abstract
Human exposure to toluene diisocyanate (TDI) occurs mainly through inhalation of vapors in occupational settings where TDI is produced or used, but dermal exposure to TDI is also possible during some operations. Because of a recent epidemiology study reporting a possible association with lung cancer risk in workers with potential dermal exposure to TDI, we evaluated the evidence from epidemiological, toxicological, and toxicokinetic studies to assess whether it is likely that dermal exposure to TDI can cause human respiratory cancers. We found that the reported associations with respiratory cancers in the epidemiology studies do not support TDI as a causal factor, as there are other explanations that are more likely than causation, such as confounding by smoking and low socioeconomic status. Experimental animal and genotoxicity studies indicate that the carcinogenic potential of TDI depends on its conversion to toluene diamine (TDA), and there is no evidence of systemic availability of TDA after dermal or inhalation exposure to TDI. Also, systemic uptake of TDI is very low after dermal exposure, and any absorbed TDI is more likely to react with biomolecules on or below the skin surface than to form TDA. Even if some TDA formation occurred after dermal exposure to TDI, TDA does not induce respiratory tract tumors in experimental animals after either dermal or oral exposure. We conclude that the available evidence indicates that dermal TDI exposure does not cause respiratory cancers in humans. Keywords: Carcinogenicity, Dermal exposure, Diisocyanates, Polyurethane foam, Respiratory cancer, Toluene diisocyanate
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- 2017
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4. Incorporating Low-Dose Epidemiology Data in a Chlorpyrifos Risk Assessment
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Julie E. Goodman, Robyn L. Prueitt, and Lorenz R. Rhomberg
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Therapeutics. Pharmacology ,RM1-950 - Abstract
USEPA assessed whether epidemiology data suggest that fetal or early-life chlorpyrifos exposure causes neurodevelopmental effects and, if so, whether they occur at exposures below those causing the current most sensitive endpoint, 10% inhibition of blood acetyl-cholinesterase (AChE). We previously conducted a hypothesis-based weight-of-evidence analysis and found that a proposed causal association between chlorpyrifos exposure and neurodevelopmental effects in the absence of AChE inhibition does not have a substantial basis in existing animal or in vitro studies, and there is no plausible basis for invoking such effects in humans at their far lower exposure levels. The epidemiology studies fail to show consistent patterns; the few associations are likely attributable to alternative explanations. Human data are inappropriate for a dose-response assessment because biomarkers were only measured at one time point, may reflect exposure to other pesticides, and many values are at or below limits of quantification. When considered with pharmacokinetic data, however, these biomarkers provide information on exposure levels relative to those in experimental studies and indicate a margin of exposure of at least 1,000. Because animal data take into account the most sensitive lifestages, the use of AChE inhibition as a regulatory endpoint is protective of adverse effects in sensitive populations.
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- 2013
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5. Critique of the ACGIH 2016 derivation of toluene diisocyanate Threshold Limit Values
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Heather N. Lynch, Robyn L. Prueitt, and Julie E. Goodman
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Threshold limit value ,Air Pollutants, Occupational ,010501 environmental sciences ,Toxicology ,01 natural sciences ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Occupational hygiene ,Occupational Exposure ,Environmental health ,medicine ,Animals ,Humans ,Asthma, Occupational ,Threshold Limit Values ,Occupational Health ,Lung function ,0105 earth and related environmental sciences ,Asthma ,Toluene diisocyanate ,business.industry ,General Medicine ,medicine.disease ,030210 environmental & occupational health ,respiratory tract diseases ,chemistry ,Toluene 2,4-Diisocyanate ,business ,Occupational asthma - Abstract
In 2016, the American Conference of Governmental Industrial Hygienists (ACGIH) lowered the 8-hr Threshold Limit Value - time-weighted average (TLV-TWA) for toluene diisocyanate (TDI) from 5 ppb to 1 ppb, and the 15-min short-term exposure limit (STEL) from 20 ppb to 5 ppb. We evaluated ACGIH's basis for lowering these values. It is our opinion that the ACGIH's evaluation of the evidence for occupational asthma and respiratory effects from TDI exposure does not fully integrate the results of all the available human and animal studies. We found that some studies reported occupational asthma cases at TWAs less than 5 ppb, but these cases were likely caused by peak exposures above 20 ppb. Advances in industrial hygiene have reduced peak exposures and the incidence of upset conditions, such as spills and accidents, in modern TDI facilities. Taken together, the human evidence indicates that adherence to the previous 8-hr TLV-TWA and 15-min STEL (5 ppb and 20 ppb, respectively) prevents most, if not all, cases of occupational asthma, and eliminates or reduces the risk of lung function decrements and other respiratory effects. While limited, the animal literature supports the human evidence and indicates that TDI-induced asthma is a threshold phenomenon. We conclude that ACGIH's decision to lower the TLV-TWA and STEL values for TDI is not adequately supported.
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- 2018
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6. 'Good Epidemiology Practice' Guidelines for Pesticide Exposure Assessment
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Julie E. Goodman, Paolo Boffetta, Crispin J. Halsall, Robyn L. Prueitt, and Andrew J. Sweetman
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medicine.medical_specialty ,exposure assessment ,Health, Toxicology and Mutagenesis ,Food consumption ,lcsh:Medicine ,010501 environmental sciences ,Risk Assessment ,01 natural sciences ,Article ,Dietary Exposure ,03 medical and health sciences ,0302 clinical medicine ,Environmental health ,Epidemiology ,Humans ,Medicine ,030212 general & internal medicine ,Retrospective Studies ,0105 earth and related environmental sciences ,Exposure assessment ,Study quality ,business.industry ,epidemiology ,methodology ,pesticides ,lcsh:R ,Pesticide Residues ,Public Health, Environmental and Occupational Health ,Reproducibility of Results ,Environmental Exposure ,Hazard ,Risk regulation ,Observational study ,business ,Risk assessment - Abstract
Both toxicology and epidemiology are used to inform hazard and risk assessment in regulatory settings, particularly for pesticides. While toxicology studies involve controlled, quantifiable exposures that are often administered according to standardized protocols, estimating exposure in observational epidemiology studies is challenging, and there is no established guidance for doing so. However, there are several frameworks for evaluating the quality of published epidemiology studies. We previously developed a preliminary list of methodology and reporting standards for epidemiology studies, called Good Epidemiology Practice (GEP) guidelines, based on a critical review of standardized toxicology protocols and available frameworks for evaluating epidemiology study quality. We determined that exposure characterization is one of the most critical areas for which standards are needed. Here, we propose GEP guidelines for pesticide exposure assessment based on the source of exposure data (i.e., biomonitoring and environmental samples, questionnaire/interview/expert record review, and dietary exposures based on measurements of residues in food and food consumption). It is expected that these GEP guidelines will facilitate the conduct of higher-quality epidemiology studies that can be used as a basis for more scientifically sound regulatory risk assessment and policy making.
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- 2020
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7. A bounding quantitative cancer risk assessment for occupational exposures to asphalt emissions during road paving operations
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Lorenz R. Rhomberg, David B. Mayfield, Robyn L. Prueitt, and James W. Rice
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Construction Materials ,Construction Industry ,Transportation ,Air Pollutants, Occupational ,010501 environmental sciences ,Toxicology ,030210 environmental & occupational health ,01 natural sciences ,Risk Assessment ,Occupational safety and health ,Hydrocarbons ,Transport engineering ,03 medical and health sciences ,0302 clinical medicine ,Cancer risk assessment ,Asphalt ,Neoplasms ,Occupational Exposure ,Environmental science ,Humans ,Risk assessment ,0105 earth and related environmental sciences ,International agency - Abstract
The International Agency for Research on Cancer recently classified straight-run bitumens and associated emissions during road paving as possibly carcinogenic to humans (Group 2B), owing to potential exposures to polycyclic aromatic hydrocarbons. We examine existing chemistry, exposure, epidemiology, and animal toxicity data to explore quantitative cancer risk implications for paving workers exposed to asphalt emissions from the data used in identifying this qualitative hazard. Epidemiology studies show no consistent cancer risk elevation. One skin-painting mouse study of paving asphalt emission condensate found a single tumor at only the highest tested dose, as did one rat inhalation study. These studies were used to develop an upper bound on possible carcinogenic potency of emissions that are inhaled or dermally deposited. Extending earlier work on roofing asphalt, we conducted time-to-tumor modeling using the dose-time-response shape for several dose levels of benzo[a]pyrene (B[a]P) in concurrent bioassay controls to infer presumed parallel dose-time-response curves for paving-asphalt-emission condensate. In addition, we developed a scientific rationale, based on general scaling considerations and on dermal uptake, for the chosen means to scale observed dermal cancer potencies in mice to apply to dermal exposures in humans. The results indicate that paving asphalt emissions have a reduced dermal cancer potency compared to roofing asphalt, consistent with the lower levels of the multi-ringed PAHs implicated in cancer risks. Based on existing occupational exposure studies, cancer risks to pavers from both dermal and inhalation exposure to asphalt emissions is within a range typically acceptable within regulatory frameworks.
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- 2018
8. Rethinking Meta‐Analysis: Applications for Air Pollution Data and Beyond
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Leslie A. Beyer, Sonja N. Sax, Catherine Petito Boyce, Julie E. Goodman, and Robyn L. Prueitt
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bias ,data synthesis ,Process (engineering) ,Management science ,Computer science ,Interpretation (philosophy) ,Clinical study design ,Special Series ,Environmental Exposure ,Environmental exposure ,National Ambient Air Quality Standards ,Data type ,Variety (cybernetics) ,meta-analysis ,Air Pollution ,Physiology (medical) ,Humans ,heterogeneity ,Safety, Risk, Reliability and Quality ,Research question ,Air pollutants - Abstract
Meta-analyses offer a rigorous and transparent systematic framework for synthesizing data that can be used for a wide range of research areas, study designs, and data types. Both the outcome of meta-analyses and the meta-analysis process itself can yield useful insights for answering scientific questions and making policy decisions. Development of the National Ambient Air Quality Standards illustrates many potential applications of meta-analysis. These applications demonstrate the strengths and limitations of meta-analysis, issues that arise in various data realms, how meta-analysis design choices can influence interpretation of results, and how meta-analysis can be used to address bias and heterogeneity. Reviewing available data from a meta-analysis perspective can provide a useful framework and impetus for identifying and refining strategies for future research. Moreover, increased pervasiveness of a meta-analysis mindset-focusing on how the pieces of the research puzzle fit together-would benefit scientific research and data syntheses regardless of whether or not a quantitative meta-analysis is undertaken. While an individual meta-analysis can only synthesize studies addressing the same research question, the results of separate meta-analyses can be combined to address a question encompassing multiple data types. This observation applies to any scientific or policy area where information from a variety of disciplines must be considered to address a broader research question.
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- 2015
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9. Weight-of-evidence evaluation of long-term ozone exposure and cardiovascular effects
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Heather N. Lynch, Robyn L. Prueitt, Ke Zu, Ferdinand J. Venditti, Sonja N. Sax, and Julie E. Goodman
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Air Pollutants ,medicine.medical_specialty ,Weight of evidence ,business.industry ,Environmental Exposure ,Toxicology ,Risk Assessment ,Causality ,National Ambient Air Quality Standards ,Experimental animal ,Ozone ,Cardiovascular Diseases ,Human exposure ,Air Pollution ,Environmental health ,Epidemiology ,medicine ,Humans ,Ozone exposure ,Toxicity Tests, Chronic ,Risk assessment ,business - Abstract
We conducted a weight-of-evidence (WoE) analysis to assess whether the current body of research supports a causal relationship between long-term ozone exposure (defined by EPA as at least 30 days in duration) at ambient levels and cardiovascular (CV) effects. We used a novel WoE framework based on the United States Environmental Protection Agency's National Ambient Air Quality Standards causal framework for this analysis. Specifically, we critically evaluated and integrated the relevant epidemiology and experimental animal data and classified a causal determination based on categories proposed by the Institute of Medicine's 2008 report, Improving the Presumptive Disability Decision-making Process for Veterans. We found that the risks of CV effects are largely null across human and experimental animal studies. The few positive associations reported in studies of CV morbidity and mortality are very small in magnitude, mainly reported in single-pollutant models, and likely attributable to bias, chance, or confounding. The few positive effects in experimental animal studies were observed mainly in ex vivo studies at high exposures, and even the in vivo findings are not likely relevant to humans. The available data also do not support a biologically plausible mechanism for the effects of ozone on the CV system. Overall, the current WoE provides no convincing case for a causal relationship between long-term exposure to ambient ozone and adverse effects on the CV system in humans, but the limitations of the available studies preclude definitive conclusions regarding a lack of causation; thus, we categorize the strength of evidence for a causal relationship between long-term exposure to ozone and CV effects as "below equipoise."
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- 2014
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10. Weight-of-evidence evaluation of short-term ozone exposure and cardiovascular effects
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Julie E, Goodman, Robyn L, Prueitt, Sonja N, Sax, Heather N, Lynch, Ke, Zu, Julie C, Lemay, Joseph M, King, and Ferdinand J, Venditti
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Models, Statistical ,Ozone ,Cardiovascular Diseases ,Air Pollution ,Toxicity Tests, Acute ,Animals ,Humans ,Environmental Exposure ,United States Environmental Protection Agency ,Toxicology ,Risk Assessment ,Selection Bias ,United States - Abstract
There is a relatively large body of research on the potential cardiovascular (CV) effects associated with short-term ozone exposure (defined by EPA as less than 30 days in duration). We conducted a weight-of-evidence (WoE) analysis to assess whether it supports a causal relationship using a novel WoE framework adapted from the US EPA's National Ambient Air Quality Standards causality framework. Specifically, we synthesized and critically evaluated the relevant epidemiology, controlled human exposure, and experimental animal data and made a causal determination using the same categories proposed by the Institute of Medicine report Improving the Presumptive Disability Decision-making Process for Veterans ( IOM 2008). We found that the totality of the data indicates that the results for CV effects are largely null across human and experimental animal studies. The few statistically significant associations reported in epidemiology studies of CV morbidity and mortality are very small in magnitude and likely attributable to confounding, bias, or chance. In experimental animal studies, the reported statistically significant effects at high exposures are not observed at lower exposures and thus not likely relevant to current ambient ozone exposures in humans. The available data also do not support a biologically plausible mechanism for CV effects of ozone. Overall, the current WoE provides no convincing case for a causal relationship between short-term exposure to ambient ozone and adverse effects on the CV system in humans, but the limitations of the available studies preclude definitive conclusions regarding a lack of causation. Thus, we categorize the strength of evidence for a causal relationship between short-term exposure to ozone and CV effects as "below equipoise."
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- 2014
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11. A survey of frameworks for best practices in weight-of-evidence analyses
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Nancy B. Beck, Michael Honeycutt, Christopher Bevan, Kimberly Wise, Lynn H. Pottenger, Robyn L. Prueitt, Norbert E. Kaminski, Roberta W. Scherer, Julie E. Goodman, Lisa A. Bailey, Richard A. Becker, Lorenz R. Rhomberg, and Greg Paoli
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Dose-Response Relationship, Drug ,Process (engineering) ,Best practice ,Stakeholder ,MEDLINE ,Ecotoxicology ,Toxicology ,Risk Assessment ,United States ,White paper ,Agency (sociology) ,Animals ,Humans ,Engineering ethics ,Public Health ,Sociology ,United States Environmental Protection Agency ,Causation ,Risk assessment - Abstract
The National Academy of Sciences (NAS) Review of the Environmental Protection Agency's Draft IRIS Assessment of Formaldehyde proposed a "roadmap" for reform and improvement of the Agency's risk assessment process. Specifically, it called for development of a transparent and defensible methodology for weight-of-evidence (WoE) assessments. To facilitate development of an improved process, we developed a white paper that reviewed approximately 50 existing WoE frameworks, seeking insights from their variations and nominating best practices for WoE analyses of causation of chemical risks. Four phases of WoE analysis were identified and evaluated in each framework: (1) defining the causal question and developing criteria for study selection, (2) developing and applying criteria for review of individual studies, (3) evaluating and integrating evidence and (4) drawing conclusions based on inferences. We circulated the draft white paper to stakeholders and then held a facilitated, multi-disciplinary invited stakeholder workshop to broaden and deepen the discussion on methods, rationales, utility and limitations among the surveyed WoE frameworks. The workshop developed recommendations for improving the conduct of WoE evaluations. Based on the analysis of the 50 frameworks and discussions at the workshop, best practices in conducting WoE analyses were identified for each of the four phases. Many of these best practices noted from the analysis and workshop could be implemented immediately, while others may require additional refinement as part of the ongoing discussions for improving the scientific basis of chemical risk assessments.
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- 2013
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12. The Weight of Evidence Does Not Support the Listing of Styrene as 'Reasonably Anticipated to be a Human Carcinogen' in NTP's Twelfth Report on Carcinogens
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Lorenz R. Rhomberg, Julie E. Goodman, and Robyn L. Prueitt
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Weight of evidence ,Pathology ,medicine.medical_specialty ,business.industry ,Health, Toxicology and Mutagenesis ,Ecological Modeling ,Incidence (epidemiology) ,weight of evidence ,Cancer ,Physiology ,medicine.disease ,Pollution ,mode of action ,Perspective Articles ,styrene ,medicine ,carcinogenicity ,Tumor type ,Limited evidence ,Animal studies ,Mode of action ,business ,metabolism ,Carcinogen - Abstract
Styrene was listed as "reasonably anticipated to be a human carcinogen" in the twelfth edition of the National Toxicology Program's Report on Carcinogens based on what we contend are erroneous findings of limited evidence of carcinogenicity in humans, sufficient evidence of carcinogenicity in experimental animals, and supporting mechanistic data. The epidemiology studies show no consistent increased incidence of, or mortality from, any type of cancer. In animal studies, increased incidence rates of mostly benign tumors have been observed only in certain strains of one species (mice) and at one tissue site (lung). The lack of concordance of tumor incidence and tumor type among animals (even within the same species) and humans indicates that there has been no particular cancer consistently observed among all available studies. The only plausible mechanism for styrene-induced carcinogenesis-a non-genotoxic mode of action that is specific to the mouse lung-is not relevant to humans. As a whole, the evidence does not support the characterization of styrene as "reasonably anticipated to be a human carcinogen," and styrene should not be listed in the Report on Carcinogens.
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- 2013
13. Evaluation of neural reflex activation as a mode of action for the acute respiratory effects of ozone
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Robyn L. Prueitt and Julie E. Goodman
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0301 basic medicine ,Ozone ,Health, Toxicology and Mutagenesis ,Respiratory System ,010501 environmental sciences ,Toxicology ,High ozone ,01 natural sciences ,03 medical and health sciences ,chemistry.chemical_compound ,Reflex ,Animals ,Humans ,Respiratory system ,Mode of action ,Lung function ,0105 earth and related environmental sciences ,Air Pollutants ,Nerve Fibers, Unmyelinated ,030104 developmental biology ,chemistry ,Human exposure ,Immunology ,Biological plausibility ,Neuroscience - Abstract
Exposure to elevated levels of ozone has been associated with a variety of respiratory-related health endpoints in both epidemiology and controlled human exposure studies, including lung function decrements and airway inflammation. A mode of action (MoA) for these effects has not been established, but it has been proposed that they may occur through ozone-induced activation of neural reflexes. We critically reviewed experimental studies of ozone exposure and neural reflex activation and applied the International Programme on Chemical Safety (IPCS) mode-of-action/human relevance framework to evaluate the biological plausibility and human relevance of this proposed MoA. Based on the currently available experimental data, we found that the proposed MoA of neural reflex activation is biologically plausible for the endpoint of ozone-induced lung function decrements at high ozone exposures, but further studies are needed to fill important data gaps regarding the relevance of this MoA at lower exposures. A role for the proposed MoA in ozone-induced airway inflammation is less plausible, as the evidence is conflicting and is also of unclear relevance given the lack of studies conducted at lower exposures. The evidence suggests a different MoA for ozone-induced inflammation that may still be linked to the key events in the proposed MoA, such that neural reflex activation may have some degree of involvement in modulating ozone-induced neutrophil influx, even if it is not a direct role.
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- 2016
14. Hypothesis-Based Weight-of-Evidence evaluation of methanol as a human carcinogen
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Robyn L. Prueitt, Lisa A. Bailey, and Lorenz R. Rhomberg
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Weight of evidence ,Pathology ,medicine.medical_specialty ,Lymphoma ,Chemistry ,Mechanism (biology) ,Methanol ,Respiratory infection ,General Medicine ,Toxicology ,Bioinformatics ,Risk Assessment ,Carcinogens, Environmental ,Oxidative Stress ,chemistry.chemical_compound ,Formaldehyde ,medicine ,Animals ,Humans ,Animal studies ,Biological plausibility ,Mode of action ,Carcinogen - Abstract
Recent scientific debate has focused on the potential for exposure to methanol to cause lymphomas in humans. The concern stems from a few animal studies reporting an association, although evidence suggests the studies may have been confounded by chronic respiratory infection. Although the toxicological evidence for methanol carcinogenesis is weak, two modes of action have been put forth, one involving metabolism of methanol to formaldehyde, followed by formaldehyde induction of lymphoma, and another involving oxidative stress caused by hydrogen peroxide release during catalase-induced metabolism of methanol to formaldehyde. In this article, we apply our Hypothesis-Based Weight-of-Evidence (HBWoE) approach to evaluate the evidence regarding methanol exposure and lymphoma, attending to how human, animal, and mode-of-action results inform one another, tracing the logic of inference within and across all studies, and articulating how one could account for the suite of available observations. Upon comparison of alternative proposals regarding what causal processes may have led to the array of observations as we see them, we conclude that the apparent association between methanol exposure and lymphoma in some animal studies is weak and strains biological plausibility, and is better interpreted as due to confounding or to a mechanism not relevant in humans.
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- 2012
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15. Dermal TDI exposure is not associated with lung cancer risk
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Ke Zu, Julie E. Goodman, Robyn L. Prueitt, and Christine T. Loftus
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Oncology ,medicine.medical_specialty ,business.industry ,Public Health, Environmental and Occupational Health ,010501 environmental sciences ,medicine.disease ,030210 environmental & occupational health ,01 natural sciences ,03 medical and health sciences ,0302 clinical medicine ,Text mining ,Internal medicine ,Medicine ,business ,Lung cancer ,0105 earth and related environmental sciences - Published
- 2017
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16. Expression of microRNAs and protein-coding genes associated with perineural invasion in prostate cancer
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Robyn L. Prueitt, Robert M. Stephens, George A. Calin, Robert S. Hudson, Stefan Ambs, Carlo M. Croce, Tiffany M. Howe, Chang Gong Liu, Tiffany A. Wallace, Ming Yi, Harris G. Yfantis, and Dong H. Lee
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Male ,Pathology ,medicine.medical_specialty ,Coxsackie and Adenovirus Receptor-Like Membrane Protein ,Urology ,Perineural invasion ,Biology ,Adenocarcinoma ,Article ,Metastasis ,Prostate cancer ,microRNA ,medicine ,Humans ,Cell Lineage ,Neoplasm Invasiveness ,Peripheral Nerves ,Oligonucleotide Array Sequence Analysis ,Microarray analysis techniques ,Cancer ,Prostatic Neoplasms ,Cell Differentiation ,medicine.disease ,Mitochondria ,Neoplasm Proteins ,Gene Expression Regulation, Neoplastic ,MicroRNAs ,Oncology ,Cancer cell ,Receptors, Virus ,Metallothionein - Abstract
BACKGROUND—Perineural invasion (PNI) is the dominant pathway for local invasion in prostate cancer. To date, only few studies have investigated the molecular differences between prostate tumors with PNI and those without it. METHODS—To evaluate the involvement of both microRNAs and protein-coding genes in PNI, we determined their genome-wide expression with a custom microRNA microarray and Affymetrix GeneChips in 50 prostate adenocarcinomas with PNI and 7 without it. In-situ hybridization and immunohistochemistry was used to validate candidate genes. RESULTS—Unsupervised classification of the 57 adenocarcinomas revealed two clusters of tumors with distinct global microRNA expression. One cluster contained all non-PNI tumors and a subgroup of PNI tumors. Significance analysis of microarray data yielded a list of microRNAs associated with PNI. At a false discovery rate (FDR) < 10%, 19 microRNAs were higher expressed in PNI tumors than in non-PNI tumors. The most differently expressed microRNA was miR-224. In-situ hybridization showed that this microRNA is expressed by perineural cancer cells. The analysis of protein-coding genes identified 34 transcripts that were differently expressed by PNI status (FDR
- Published
- 2008
17. Lung Function Decrements with 0.06 ppm Ozone Exposure Are of Limited Clinical and Public Health Significance
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Robyn L. Prueitt
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Pulmonary and Respiratory Medicine ,medicine.medical_specialty ,business.industry ,Public health ,Environmental health ,Medicine ,Ozone exposure ,Critical Care and Intensive Care Medicine ,business ,Lung function - Published
- 2011
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