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[Display omitted] • 886–1540 low-copy nuclear genes assembled from WGS data of 26 newly sequenced taxa. • New phylogenomic placement of Vuralia turcica and Thermopsis chinensis strongly supported. • Cytonuclear discordance detected within two North American thermopsoid subclades. • Late Miocene origin of Thermopsideae in North America strongly supported. • A polyphyletic Thermopsis raises need for taxonomic revision. • Multiple long-distance dispersions detected. The North American Thermopsideae (Fabaceae: Papilionoideae), a monophyletic group comprising the North American endemic genus Baptisia , and the paraphyletic Eurasian–North American disjunct Thermopsis , is nested within the tribe Sophoreae. Previous phylogenetic studies have identified two East Asian taxa within the North American Thermopsideae, suggesting two independent dispersal events between North America–East Asia. More recent studies have also placed a third taxon, Vuralia turcica , an endemic species from Turkey, among the North American Thermopsideae. The presence of three geographically distant Eurasian taxa within a relatively young clade of North American origin is unprecedented among papilionoid legumes, and the biogeographic implications of this observation are not clear. To investigate this matter, 1540 low-copy nuclear genes and complete plastomes were obtained from 36 taxa across the core genistoids, including 26 newly sequenced taxa. Nuclear and plastome based maximum likelihood (ML) and ASTRAL analyses were conducted based on varying degrees of taxon coverage and read mapping consensus threshold values. Additional analyses were performed to estimate divergence times and to reconstruct biogeographic history. The results strongly support a previously undetected Old World clade, presently composed of V. turcica and T. chinensis , which diverged from the ancestor of the North American lineage during the mid to late Miocene. A single and recent North America–East Asia dispersal involving T. lupinoides is reported. Furthermore, the traditional inclusion of the genus Ammopiptanthus among Thermopsideae is not supported, and the monotypic generic status of Vuralia is called into question. A relatively high degree of cytonuclear discordance is reported within each sub-clade of the North American Thermopsideae. This finding is likely attributable to the high degree of interspecific hybridization reported within these groups and raises the need for more rigorous genome-scale testing to better delimit species within each of the reticulating subclades. Subjects: Biodiversity, Biogeography, Evolutionary Studies, Genetics, Plant Science. [ABSTRACT FROM AUTHOR]

Interspecific and intergeneric crosses were performed between species in the genera Baptisia and Thermopsis with the goal of creating hybrids with the best qualities of both parents. Baptisia australis (L.) R. Br. was used as both the male and female parent in intergeneric crosses. Thermopsis chinensis Benth. ex S. Moore, T. lupinoides (L.) Link, and T. villosa Fernald & B.G. Schub. were used as male and female parents in both interspecific and intergeneric crosses. Pollen was collected from B. alba (L.) Vent., B. bracteata Muhl. ex Elliott, and B. lanceolata (Walt.) Ell. and used to make interspecific and intergeneric crosses. Putative hybrids were obtained from both interspecific and intergeneric crosses. Interspecific crosses produced a higher percentage of pollinations resulting in seed set and the number of seeds per pollination than intergeneric crosses. Morphological differences between parent species and progeny were evident in putative hybrids resulting from intergeneric crosses between T. villosa and B. australis and T. villosa and B. alba. Most putative hybrids bloomed during the second year after germination. Because seedlings could be obtained from both interspecific and intergeneric crosses, hybrids within and between the genera Baptisia and Thermopsis are feasible. The Fabaceae family contains 670-750 genera and 18,000-19,000 species. Baptisia (commonly called false or wild indigo) and Thermopsis (commonly named false lupine) of the Fabaceae belong to the tribe Thermopsidae, which comprises 46 species in six genera. All species in Thermopsis and Baptisia are herbaceous; they are the only two genera in Thermopsidae that do not have woody species. Thermopsis contains 23 species and has a wide-spread distribution with species endemic to Asia and much of temperate North America. Although Thermopsis is considered to have originated in central Asia, T. chinensis Benth. ex S. Moore and T. fabacea (Pallas) Candole are thought to have originated in North America and migrated over the Bering Land Strait to Asia. Three Thermopsis species, T. fraxinifolia Nutt. ex M.A. Curtis, T. mollis (Michx.) M.A. Curtis ex A. Gray, and T. villosa Fernald & B.G. Schub., are native to the southeastern United States. Baptisia contains 15-17 species that are endemic to the southeastern and midwestern United States. [ABSTRACT FROM AUTHOR]