1. Study on the role of methylation in nonsyndromic cleft lip with or without cleft palate using a monozygotic twin model
- Author
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Qi Wang, Xuheng Shi, Changsheng Sun, Tao Song, and Qiang Guo
- Subjects
Smooth muscle cell migration ,Cleft Lip ,Notch signaling pathway ,Monozygotic twin ,Polymorphism, Single Nucleotide ,03 medical and health sciences ,0302 clinical medicine ,030225 pediatrics ,Humans ,Medicine ,030223 otorhinolaryngology ,Genetics ,business.industry ,Actin cytoskeleton reorganization ,Wnt signaling pathway ,Twins, Monozygotic ,General Medicine ,Methylation ,DNA Methylation ,Cleft Palate ,Otorhinolaryngology ,CpG site ,Case-Control Studies ,Pediatrics, Perinatology and Child Health ,DNA methylation ,business - Abstract
Objective The research on the etiology of nonsyndromic cleft lip with or without cleft palate(NSCL/P) is challenging, and DNA methylation has an impact on the formation of cleft lip and palate. Subjects In this study, one of a pair of monozygotic twins (T1) had nonsyndromic cleft lip (NSCL), and one of a pair of monozygotic twins (T2) had nonsyndromic cleft lip and palate (NSCLP). We determined the methylation profiles of more than 850,000 CpGs in the DNA of the blood samples from the two pairs of monozygotic twins. Result Methylation data indicated that 1184 differentially methylated CpG sites were found in the T1 group (651 hypermethylated and 533 hypomethylated) and 8099 differentially methylated CpG sites in the T2 group (1713 hypermethylated and 6386 hypomethylated) compared with the healthy twin.The common difference was 107 methylation sites.GO enrichment analysis showed that regulation of smooth muscle cell migration and actin cytoskeleton reorganization were the most prominent classes.KEGG pathway enrichment analysis showed that the TGF-β signaling pathway, Notch signaling pathway and Wnt signaling pathway are relevant to the formation of NSCL/P.Two selected genes (NTN1 and PLEKHA7) are involved in the formation of NSCL/P. Conclusion These findings provide some support for the hypothesis that abnormal DNA methylation may influence the formation of clefts.
- Published
- 2021
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