25 results on '"Matthew J. Cecchini"'
Search Results
2. TBX3 promotes progression of pre‐invasive breast cancer cells by inducing EMT and directly up‐regulating SLUG
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Milica Krstic, Joseph Torchia, Connor D MacMillan, Haider M. Hassan, Karla C. Williams, Joseph Andrews, Ann F. Chambers, Carl O. Postenka, Matthew J. Cecchini, Alan B. Tuck, Bart Kolendowski, Muriel Brackstone, and Hon S. Leong
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0301 basic medicine ,Epithelial-Mesenchymal Transition ,Slug ,Regulator ,Breast Neoplasms ,Context (language use) ,SLUG ,Pathology and Forensic Medicine ,Transcriptome ,03 medical and health sciences ,breast cancer ,0302 clinical medicine ,Breast cancer ,Cell Movement ,Cell Line, Tumor ,Ductal carcinoma in situ (DCIS) ,epithelial‐to‐mesenchymal transition (EMT) ,medicine ,Transcriptional regulation ,Humans ,Neoplasm Invasiveness ,Neoplasm Staging ,Original Paper ,biology ,Middle Aged ,TBX3 ,Ductal carcinoma ,biology.organism_classification ,medicine.disease ,Original Papers ,Up-Regulation ,3. Good health ,Gene Expression Regulation, Neoplastic ,Carcinoma, Intraductal, Noninfiltrating ,030104 developmental biology ,ductal carcinoma in situ (DCIS) ,030220 oncology & carcinogenesis ,Disease Progression ,Cancer research ,Female ,Snail Family Transcription Factors ,Neoplasm Grading ,T-Box Domain Proteins ,epithelial-to-mesenchymal transition (EMT) ,Signal Transduction - Abstract
The acquisition of cellular invasiveness by breast epithelial cells and subsequent transition from ductal carcinoma in situ (DCIS) to invasive breast cancer is a critical step in breast cancer progression. Little is known about the molecular dynamics governing this transition. We have previously shown that overexpression of the transcriptional regulator TBX3 in DCIS‐like cells increases survival, growth, and invasiveness. To explore this mechanism further and assess direct transcriptional targets of TBX3 in a high‐resolution, isoform‐specific context, we conducted genome‐wide chromatin‐immunoprecipitation (ChIP) arrays coupled with transcriptomic analysis. We show that TBX3 regulates several epithelial–mesenchymal transition (EMT)‐related genes, including SLUG and TWIST1. Importantly, we demonstrate that TBX3 is a direct regulator of SLUG expression, and SLUG expression is required for TBX3‐induced migration and invasion. Assessing TBX3 by immunohistochemistry in early‐stage (stage 0 and stage I) breast cancers revealed high expression in low‐grade lesions. Within a second independent early‐stage non‐high‐grade cohort, we observed an association between TBX3 level in the DCIS and size of the invasive focus. Additionally, there was a positive correlation between TBX3 and SLUG, and TBX3 and TWIST1 in the invasive carcinoma. Pathway analysis revealed altered expression of several proteases and their inhibitors, consistent with the ability to degrade basement membrane in vivo. These findings strongly suggest the involvement of TBX3 in the promotion of invasiveness and progression of early‐stage pre‐invasive breast cancer to invasive carcinoma through the low‐grade molecular pathway. © 2019 The Authors. The Journal of Pathology published by John Wiley & Sons Ltd on behalf of Pathological Society of Great Britain and Ireland.
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- 2019
3. Osteopontin lung gene expression is a marker of disease severity in pulmonary arterial hypertension
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Mariamma Joseph, Marco Mura, John Granton, and Matthew J. Cecchini
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Pulmonary and Respiratory Medicine ,Pathology ,medicine.medical_specialty ,Lung ,biology ,business.industry ,medicine.medical_treatment ,medicine.disease ,Pulmonary hypertension ,Vascular remodelling in the embryo ,Reverse transcription polymerase chain reaction ,03 medical and health sciences ,0302 clinical medicine ,medicine.anatomical_structure ,stomatognathic system ,030228 respiratory system ,medicine.artery ,Pulmonary artery ,Pulmonary fibrosis ,medicine ,biology.protein ,Lung transplantation ,030212 general & internal medicine ,Osteopontin ,business - Abstract
Background and objective Osteopontin (OPN) is a pleiotropic cytokine involved in the proliferation of pulmonary artery smooth muscle cells (PA-SMC). OPN is upregulated in the lungs of patients with pulmonary hypertension (PH) associated with pulmonary fibrosis, suggesting that the lung is a source of OPN. We hypothesized that OPN lung expression is elevated in Group I pulmonary arterial hypertension (PAH) and is correlated to haemodynamics. Methods Microarray analysis (Affymetrix) was performed after RNA was extracted from explanted lungs in 15 patients with Group I PAH who underwent lung transplantation (LTx) and 11 normal controls. PA pressure levels were recorded intraoperatively, immediately before starting LTx. Serum OPN levels were measured in subjects with PAH, Group II PH and normal controls on the day of right heart catheterization. Results OPN was among the top five upregulated genes in PAH compared to normal controls, which was confirmed by reverse transcription polymerase chain reaction (RT-PCR). OPN expression was similar and equally elevated in different subtypes of PAH. A strong significant correlation was observed between mean pulmonary arterial pressure and OPN gene expression. Ingenuity pathway analysis showed the involvement of OPN in functions and networks relevant to angiogenesis, cell death and proliferation of PA-SMC. OPN serum levels did not differ in subjects with Group I PAH and Group II PH. Conclusion In the lungs of patients with severe PAH, OPN is highly expressed and the level of expression is significantly correlated to disease severity. OPN may play an important role in the vascular remodelling process of PAH.
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- 2019
4. High MHC-II expression in Epstein–Barr virus-associated gastric cancers suggests that tumor cells serve an important role in antigen presentation
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Steven F. Gameiro, Tanner M. Tessier, Allison H. Maciver, Farhad Ghasemi, Matthew J. Cecchini, and Joe S. Mymryk
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0301 basic medicine ,Epstein-Barr Virus Infections ,Herpesvirus 4, Human ,Antigen presentation ,lcsh:Medicine ,Antigen-Presenting Cells ,chemical and pharmacologic phenomena ,Major histocompatibility complex ,medicine.disease_cause ,Article ,03 medical and health sciences ,Gastrointestinal cancer ,0302 clinical medicine ,Antigen ,Downregulation and upregulation ,Stomach Neoplasms ,CIITA ,medicine ,Tumor Microenvironment ,Humans ,Tumour virus infections ,lcsh:Science ,Cancer ,Antigen Presentation ,Multidisciplinary ,biology ,lcsh:R ,Histocompatibility Antigens Class II ,Epstein–Barr virus ,BZLF1 ,030104 developmental biology ,030220 oncology & carcinogenesis ,biology.protein ,Cancer research ,Trans-Activators ,Tumour immunology ,lcsh:Q ,RFX5 - Abstract
EBV-associated gastric adenocarcinomas (EBVaGCs) often exhibit better clinical outcomes than EBV negative gastric cancers (GCs), which could be related to their consistent expression of foreign viral antigens. Antigen-presenting cells (APCs) present peptide antigens in the context of the class-II major histocompatibility complex (MHC-II). During inflammatory conditions, epithelial cells express MHC-II and function as accessory APCs. Utilizing RNA-seq data from nearly 400 GC patients, we determined the impact of EBV-status on expression of MHC-II components, genes involved in their regulation, and T-cell co-stimulation. Virtually all MHC-II genes were significantly upregulated in EBVaGCs compared to normal tissues, or other GC subtypes. Genes involved in antigen presentation were also significantly upregulated in EBVaGCs, as were the key MHC-II transcriptional regulators CIITA and RFX5. This was unexpected as the EBV encoded BZLF1 protein can repress CIITA transcription and is expressed in many EBVaGCs. Furthermore, MHC-II upregulation was strongly correlated with elevated intratumoral levels of interferon-gamma. In addition, expression of co-stimulatory molecules involved in T-cell activation and survival was also significantly increased in EBVaGCs. Thus, gastric adenocarcinoma cells may functionally contribute to the highly immunogenic tumor microenvironment observed in EBVaGCs via a previously unappreciated role in interferon-induced antigen presentation.
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- 2020
5. Gastric outlet obstruction by a lost gallstone: Case report and literature review
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Ken Leslie, Jennifer Koichopolos, Moska Hamidi, and Matthew J. Cecchini
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medicine.medical_specialty ,medicine.medical_treatment ,Malignancy ,Article ,Biliary disease ,03 medical and health sciences ,Laparoscopic cholecystectomy ,0302 clinical medicine ,Case report ,medicine ,Billroth II ,business.industry ,General surgery ,Lost gallstones ,Gastric outlet obstruction ,Gallstones ,medicine.disease ,Pylorus ,Surgery ,medicine.anatomical_structure ,030220 oncology & carcinogenesis ,Etiology ,030211 gastroenterology & hepatology ,Cholecystectomy ,business - Abstract
Highlights • Gallstones may be lost in a laparoscopic cholecystectomy and cause morbidity. • Diagnosis of complications are difficult. • Findings may be mistaken for malignancies unless clinical suspicion remains high. • Inflammation from lost stones can obstruct the lumen of the gastrointestinal tract. • Lost gallstones are best managed during the initial cholecystectomy., Introduction Spilled gallstones from a laparoscopic cholecystectomy can be a source of significant morbidity, most commonly causing abscesses and fistulae. Preventative measures for loss, careful removal during the initial surgery, and good documentation of any concern for remaining intraperitoneal stones needs to be performed with the initial surgery. Case report An 80-year-old male with a history of complicated biliary disease resulting in a cholecystectomy presented to general surgery clinic with increasing symptoms of gastric outlet obstruction. CT imaging was concerning for a malignant process despite negative biopsies. A distal gastrectomy and Billroth II reconstruction was performed and final pathology showed dense inflammation with a single calcified stone incarcerated within the gastric wall of the inflamed pylorus and no malignancy. Discussion Stones lost during laparoscopic cholecystectomy are not innocuous and preventative measures for loss, careful removal during the initial surgery, and good documentation of any concern for remaining intraperitoneal stones. Conclusion This is the first case of gastric outlet obstruction caused by an intramural obstruction of the pylorus from a spilled gallstone during a laparoscopic cholecystectomy and subsequent inflammation. This is an etiology that must be considered in new cases of gastric outlet obstruction and can mimic malignancy.
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- 2017
6. Chronic Myelomonocytic Leukemia Mimicking Invasive Fungal Rhinosinusitis
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Kathryn Roth, J. Alexander Fraser, Seth A Climans, Matthew J Cecchini, Michael J Shkrum, Lise C Bondy, and Cyrus C Hsia
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Pathology ,medicine.medical_specialty ,medicine.diagnostic_test ,business.industry ,Chronic myelomonocytic leukemia ,Magnetic resonance imaging ,General Medicine ,Neuropathology ,medicine.disease ,Neuro-ophthalmology ,03 medical and health sciences ,Leukemia ,0302 clinical medicine ,Chronic disease ,Neurology ,030220 oncology & carcinogenesis ,medicine ,Neurology (clinical) ,030223 otorhinolaryngology ,business - Published
- 2018
7. Pathology of Vaping-Associated Lung Injury
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Karen L. Swanson, Henry D. Tazelaar, Melanie C. Bois, Aiyub Patel, Jennifer M. Boland, Yasmeen M. Butt, Adam T. Froemming, Maxwell L. Smith, Laszlo T. Vaszar, James H. Boyum, Isabel Mira-Avendano, Andras Khoor, Matthew J. Cecchini, and Brandon T. Larsen
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Adult ,Lung Diseases ,Male ,Pathology ,medicine.medical_specialty ,Biopsy ,MEDLINE ,Poison control ,030204 cardiovascular system & hematology ,Lung injury ,Electronic Nicotine Delivery Systems ,Suicide prevention ,Occupational safety and health ,03 medical and health sciences ,0302 clinical medicine ,Injury prevention ,Medicine ,Humans ,030212 general & internal medicine ,Lung ,Aged ,medicine.diagnostic_test ,business.industry ,Vaping ,General Medicine ,Pneumonia ,respiratory system ,Middle Aged ,respiratory tract diseases ,medicine.anatomical_structure ,Female ,business - Abstract
Pathology of Vaping-Associated Lung Injury This letter describes findings in 17 patients with a history of vaping who had lung biopsies after presenting with symptoms and bilateral pulmonary opacit...
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- 2019
8. Loss of Thymine DNA Glycosylase Causes Dysregulation of Bile Acid Homeostasis and Hepatocellular Carcinoma
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Matthew J. Cecchini, Aaron Haig, Majdina Isovic, Oladapo Onabote, Joseph Torchia, Haider M. Hassan, Bart Kolendowski, Natasha Bauer-Maison, T. Michael Underhill, and Saman Maleki Vareki
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0301 basic medicine ,Male ,Carcinoma, Hepatocellular ,medicine.drug_class ,Receptors, Cytoplasmic and Nuclear ,General Biochemistry, Genetics and Molecular Biology ,Bile Acids and Salts ,03 medical and health sciences ,Mice ,0302 clinical medicine ,Coactivator ,medicine ,Glucose homeostasis ,Animals ,Homeostasis ,Humans ,Epigenetics ,lcsh:QH301-705.5 ,Bile acid ,Chemistry ,Liver Neoplasms ,Hep G2 Cells ,Thymine DNA Glycosylase ,Mice, Inbred C57BL ,030104 developmental biology ,Glucose ,lcsh:Biology (General) ,Nuclear receptor ,Liver ,Cancer research ,Small heterodimer partner ,Farnesoid X receptor ,Female ,Thymine-DNA glycosylase ,030217 neurology & neurosurgery - Abstract
Summary: Thymine DNA glycosylase (TDG) is a nuclear receptor coactivator that plays an essential role in the maintenance of epigenetic stability in cells. Here, we demonstrate that the conditional deletion of TDG in adult mice results in a male-predominant onset of hepatocellular carcinoma (HCC). TDG loss leads to a prediabetic state, as well as bile acid (BA) accumulation in the liver and serum of male mice. Consistent with these data, TDG deletion led to dysregulation of the farnesoid X receptor (FXR) and small heterodimer partner (SHP) regulatory cascade in the liver. FXR and SHP are tumor suppressors of HCC and play an essential role in BA and glucose homeostasis. These results indicate that TDG functions as a tumor suppressor of HCC by regulating a transcriptional program that protects against the development of glucose intolerance and BA accumulation in the liver. : TDG is a base excision repair protein that is essential for embryonic development. Hassan et al. show that the conditional deletion of TDG in adult mice causes dysregulation of FXR signaling and a loss of glucose and bile acid homeostasis. This leads to a late-onset development of hepatocellular carcinoma. Keywords: thymine DNA glycosylase, active DNA demethylation, TET, hepatocellular carcinoma, FXR, bile acids, insulin resistance, conditional deletion, hepatoblastoma
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- 2019
9. CDX2 and Muc2 immunohistochemistry as prognostic markers in stage II colon cancer
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David K. Driman, Joanna C. Walsh, Subrata Chakrabarti, Matthew J. Cecchini, Mary J. MacKenzie, Rohann J. Correa, and Jeremy Parfitt
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0301 basic medicine ,Oncology ,Male ,medicine.medical_specialty ,Colorectal cancer ,medicine.medical_treatment ,Adenocarcinoma ,Pathology and Forensic Medicine ,03 medical and health sciences ,0302 clinical medicine ,Internal medicine ,medicine ,Biomarkers, Tumor ,Humans ,CDX2 Transcription Factor ,CDX2 ,Aged ,Neoplasm Staging ,Aged, 80 and over ,Chemotherapy ,Mucin-2 ,biology ,business.industry ,Hazard ratio ,Gene signature ,Middle Aged ,medicine.disease ,Prognosis ,Immunohistochemistry ,digestive system diseases ,Survival Rate ,030104 developmental biology ,030220 oncology & carcinogenesis ,Colonic Neoplasms ,biology.protein ,Female ,Stem cell ,business ,Villin - Abstract
The treatment for colorectal cancer is largely surgical followed by adjuvant chemotherapy in high-risk cases. In patients with stage II cancer, there is no clear benefit for chemotherapy, and the current tools for assessment of risk are inadequate. A recent study identified that colorectal cancer with a gene signature similar to undifferentiated colonic stem cells was associated with a worse outcome. It was later shown that loss of CDX2 detected by immunohistochemistry (IHC) alone resulted in a worse prognosis and that this could be used to predict patients who would benefit from chemotherapy. Having observed that CDX2 expression can be patchy, we elected to validate these prior results for clinical practice using whole-slide IHC. The pathology of all cases was reviewed, and 3 blocks were selected for CDX2 IHC. We also expanded the panel beyond CDX2 to assess whether other markers in the gene signature including CDX1, Muc2, GPX2, and villin could better predict outcome. Among 210 cases, CDX2 expression was diffusely lost in 11% and focally lost in 23% of cases. There was no difference in survival based on CDX2 expression, but Muc2 loss was associated with reduced survival (hazard ratio, 3.32; 95% confidence interval, 1.20 to 9.20). No significant differences in outcome were identified based on CDX1, GPX2, or villin expression. In keeping with this, assessment of The Cancer Genome Atlas gene expression data demonstrated that decreased Muc2 expression was associated with reduced overall survival. Our results with whole-slide IHC are different from the previous studies and caution against the use of CDX2 in isolation as a prognostic marker in clinical practice. We have identified that loss of Muc2 is associated with reduced survival. This supports the use of the colonic differentiation gene expression signature to identify high-risk patients but cautions against the use of any one IHC-based marker in isolation.
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- 2019
10. Context dependent roles for RB-E2F transcriptional regulation in tumor suppression
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Komila Zakirova, Michael J. Thwaites, Frederick A. Dick, Daniel Thompsen Passos, and Matthew J. Cecchini
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Carcinogenesis ,Gene Expression ,Synthesis Phase ,medicine.disease_cause ,Biochemistry ,Retinoblastoma Protein ,Mice ,0302 clinical medicine ,Neoplasms ,Transcriptional regulation ,Medicine and Health Sciences ,Cell Cycle and Cell Division ,Neurological Tumors ,Cells, Cultured ,Regulation of gene expression ,0303 health sciences ,Mutation ,Multidisciplinary ,Transcriptional Control ,Cell Cycle ,Animal Models ,Cell cycle ,Cell Cycle Gene ,Cell biology ,Nucleic acids ,Gene Expression Regulation, Neoplastic ,Experimental Organism Systems ,Oncology ,Neurology ,Cell Processes ,030220 oncology & carcinogenesis ,Medicine ,Research Article ,Signal Transduction ,Cyclin-Dependent Kinase Inhibitor p21 ,Science ,Transgene ,Primary Cell Culture ,Mouse Models ,Mice, Transgenic ,Biology ,Research and Analysis Methods ,Pituitary Tumors ,Proto-Oncogene Proteins p21(ras) ,03 medical and health sciences ,Model Organisms ,DNA-binding proteins ,medicine ,Genetics ,Animals ,Humans ,Gene Regulation ,Genetic Predisposition to Disease ,E2F ,Transcription factor ,Cell Cycle Inhibitors ,030304 developmental biology ,Biology and Life Sciences ,Cancers and Neoplasms ,Proteins ,Cell Biology ,DNA ,Fibroblasts ,Regulatory Proteins ,E2F Transcription Factors ,Disease Models, Animal ,Ki-67 Antigen ,Animal Studies ,DNA damage ,Tumor Suppressor Protein p53 ,Transcription Factors - Abstract
RB-E2F transcriptional control plays a key role in regulating the timing of cell cycle progression from G1 to S-phase in response to growth factor stimulation. Despite this role, it is genetically dispensable for cell cycle exit in primary fibroblasts in response to growth arrest signals. Mice engineered to be defective for RB-E2F transcriptional control at cell cycle genes were also found to live a full lifespan with no susceptibility to cancer. Based on this background we sought to probe the vulnerabilities of RB-E2F transcriptional control defects found in Rb1 R461E,K542E mutant mice (Rb1 G ) through genetic crosses with other mouse strains. We generated Rb1 G/G mice in combination with Trp53 and Cdkn1a deficiencies, as well as in combination with Kras G12D . The Rb1 G mutation enhanced Trp53 cancer susceptibility, but had no effect in combination with Cdkn1a deficiency or Kras G12D . Collectively, this study indicates that compromised RB-E2F transcriptional control is not uniformly cancer enabling, but rather has potent oncogenic effects when combined with specific vulnerabilities.
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- 2019
11. A case of thymoma with type A and micronodular thymoma with lymphoid stroma elements
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Said Yassin, Marie-Christine Aubry, Julie K. Harrington, Matthew J. Cecchini, and Clayton E. Kibler
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0301 basic medicine ,Pathology ,medicine.medical_specialty ,Thymoma ,business.industry ,Mediastinal mass ,Type A thymoma ,Micronodular thymoma ,medicine.disease ,Pathology and Forensic Medicine ,Resection ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,030220 oncology & carcinogenesis ,lcsh:Pathology ,medicine ,Lymphoid stroma ,business ,Micronodular Thymoma ,lcsh:RB1-214 - Abstract
Here we present a case of a 75-year-old man with an incidentally discovered anterior mediastinal mass, which on resection showed histologic features of both type A and micronodular thymoma with lymphoid stroma (MNT). MNT is a rare variant of thymoma with a characteristic appearance of distinct nodules of epithelial cells with few interspersed lymphocytes surrounded by abundant lymphoid stroma that lacks epithelial cells. We discuss features of this tumor and compare similar cases reported in the literature.
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- 2021
12. Implementing a structured digital-based online pathology curriculum for trainees at the time of COVID-19
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Simon F. Roy and Matthew J. Cecchini
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0301 basic medicine ,Canada ,Pathology ,medicine.medical_specialty ,Coronavirus disease 2019 (COVID-19) ,Pneumonia, Viral ,MEDLINE ,computer.software_genre ,Pathology and Forensic Medicine ,Education, Distance ,Betacoronavirus ,03 medical and health sciences ,0302 clinical medicine ,Videoconferencing ,medicine ,Humans ,Social media ,Pandemics ,Curriculum ,Internet ,Pathology, Clinical ,Case volume ,SARS-CoV-2 ,business.industry ,COVID-19 ,Internship and Residency ,General Medicine ,United States ,030104 developmental biology ,030220 oncology & carcinogenesis ,Passive learning ,The Internet ,Coronavirus Infections ,Psychology ,business ,computer ,Computer-Assisted Instruction - Abstract
The COVID-19 pandemic has resulted in delayed elective surgeries and reduced surgical pathology case volume. Case volume and feedback are critical components of postgraduate pathology training as they are essential to developing the skills required to transition into independent practice.1 The current approach has been the utilisation of videoconferencing and sharing of didactic lectures on social media (#virtualpath) platforms to ensure the continuation of medical education. Associations such as the College of American Pathologists (CAP) and the United States and Canadian Academy of Pathology (USCAP) have graciously offered online lectures (CAP: the Virtual Lecture Series for Pathology Residents,2 USCAP: eLearning Center).3 These approaches, while incredibly valuable, are relatively passive learning formats when contrasted with conventional pathology residency where trainees actively …
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- 2020
13. Context dependent roles for RB-E2F transcriptional regulation in tumor suppression
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Daniel Thompsen Passos, Frederick A. Dick, Michael J. Thwaites, and Matthew J. Cecchini
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0303 health sciences ,Mutation ,Growth factor ,medicine.medical_treatment ,Mutant ,Context (language use) ,Cell cycle ,Biology ,medicine.disease_cause ,Cell Cycle Gene ,Cell biology ,03 medical and health sciences ,0302 clinical medicine ,030220 oncology & carcinogenesis ,medicine ,Transcriptional regulation ,E2F ,030304 developmental biology - Abstract
RB-E2F transcriptional control plays a key role in regulating the timing of cell cycle progression from G1 to S-phase in response to growth factor stimulation. Despite this role, it is genetically dispensable for cell cycle exit in primary fibroblasts in response to growth arrest signals. Mice engineered to be defective for RB-E2F transcriptional control at cell cycle genes were also found to live a full lifespan with no susceptibility to cancer. Based on this background we sought to probe the vulnerabilities of RB-E2F transcriptional control defects found in Rb1R461E,K542E mutant mice (Rb1G) through genetic crosses with other mouse strains. We generated Rb1G/G mice in combination with Trp53 and Cdkn1a deficiencies, as well as in combination with KrasG12D. The Rb1G mutation enhanced Trp53 cancer susceptibility, but had no effect in combination with Cdkn1a deficiency or KrasG12D. Collectively, this study indicates that compromised RB-E2F transcriptional control is not uniformly cancer enabling, but rather has potent oncogenic effects when combined with specific vulnerabilities.
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- 2018
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14. Comprehensive gene expression profiling identifies distinct and overlapping transcriptional profiles in non-specific interstitial pneumonia and idiopathic pulmonary fibrosis
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Marco Mura, Karishma Hosein, Christopher J. Howlett, Mariamma Joseph, and Matthew J. Cecchini
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Adult ,Male ,0301 basic medicine ,Senescence ,Pathology ,medicine.medical_specialty ,Transcription, Genetic ,Non-specific interstitial pneumonia ,Idiopathic pulmonary fibrosis ,Microarray ,Periostin ,03 medical and health sciences ,0302 clinical medicine ,Usual interstitial pneumonia ,medicine ,Humans ,Idiopathic Interstitial Pneumonias ,Lung ,Aged ,lcsh:RC705-779 ,Microarray analysis techniques ,business.industry ,Research ,Gene Expression Profiling ,lcsh:Diseases of the respiratory system ,Middle Aged ,respiratory system ,Gene signature ,medicine.disease ,humanities ,respiratory tract diseases ,3. Good health ,Gene expression profiling ,030104 developmental biology ,030228 respiratory system ,Female ,business - Abstract
Background The clinical-radiographic distinction between idiopathic pulmonary fibrosis (IPF) and non-specific interstitial pneumonia (NSIP) is challenging. We sought to investigate the gene expression profiles of IPF and NSIP vs. normal controls. Methods Gene expression from explanted lungs of patients with IPF (n = 22), NSIP (n = 10) and from normal controls (n = 11) was assessed. Microarray analysis included Significance Analysis of Microarray (SAM), Ingenuity Pathway, Gene-Set Enrichment and unsupervised hierarchical clustering analyses. Immunohistochemistry and serology of proteins of interest were conducted. Results NSIP cases were significantly enriched for genes related to mechanisms of immune reaction, such as T-cell response and recruitment of leukocytes into the lung compartment. In IPF, in contrast, these involved senescence, epithelial-to-mesenchymal transition, myofibroblast differentiation and collagen deposition. Unlike the IPF group, NSIP cases exhibited a strikingly homogenous gene signature. Clustering analysis identified a subgroup of IPF patients with intermediate and ambiguous expression of SAM-selected genes, with the interesting upregulation of both NSIP-specific and senescence-related genes. Immunohistochemistry for p16, a senescence marker, on fibroblasts differentiated most IPF cases from NSIP. Serial serum levels of periostin, a senescence effector, predicted clinical progression in a cohort of patients with IPF. Conclusions Comprehensive gene expression profiling in explanted lungs identifies distinct transcriptional profiles and differentially expressed genes in IPF and NSIP, supporting the notion of NSIP as a standalone condition. Potential gene and protein markers to discriminate IPF from NSIP were identified, with a prominent role of senescence in IPF. The finding of a subgroup of IPF patients with transcriptional features of both NSIP and senescence raises the hypothesis that “senescent” NSIP may represent a risk factor to develop superimposed IPF. Electronic supplementary material The online version of this article (10.1186/s12931-018-0857-1) contains supplementary material, which is available to authorized users.
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- 2018
15. Immunohistochemical Detection of the Retinoblastoma Protein
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Charles A. Ishak, Christopher J. Howlett, Matthew J. Cecchini, and Frederick A. Dick
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0301 basic medicine ,biology ,Retinoblastoma protein ,Cancer ,Formalin fixed ,Cell cycle ,medicine.disease ,03 medical and health sciences ,030104 developmental biology ,Cancer research ,medicine ,biology.protein ,Phosphorylation ,Immunohistochemistry ,Functional status ,Genome stability - Abstract
The retinoblastoma protein (pRB) plays a key role in proliferative control and genome stability. For these reasons its functions are considered to be tumor suppressive. Its functional status offers critical insight into proliferative control signaling in tissues and in developing malignancies. In this chapter, we outline basic procedures to detect the retinoblastoma protein in formalin fixed, paraffin embedded tissue sections. In addition, we provide protocols to detect phosphorylation levels of pRB in tissues and offer controls to ensure fidelity of measurement. Importantly, these staining methods utilize broadly available reagents and equipment making them accessible to most biomedical research laboratories.
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- 2018
16. A Case of Localized Pulmonary Calcification Presenting as a Persistent Mass Lesion in an Immunosuppressed Patient Following Treatment of a Pseudomonas Pneumonia
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Matthew J. Cecchini, Dominic L Shepherd, and Jessica G. Shepherd
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0301 basic medicine ,Parathyroidectomy ,Pathology ,medicine.medical_specialty ,medicine.medical_treatment ,immunosupressed ,Lung biopsy ,pulmonary calcification ,03 medical and health sciences ,0302 clinical medicine ,Pseudomonas infection ,medicine ,Hyperparathyroidism ,Lung ,business.industry ,General Engineering ,medicine.disease ,pseudomonas ,respiratory tract diseases ,Transplantation ,Pneumonia ,030104 developmental biology ,medicine.anatomical_structure ,030220 oncology & carcinogenesis ,business ,Calcification - Abstract
We report a case of a persistent right upper lobe opacity following treatment for a Pseudomonas infection in an immunosuppressed patient with a recent renal transplantation. The patient underwent a surgical lung biopsy for definitive diagnosis of the mass. The lesion was composed of extensive calcifications deposited throughout the lung with associated fibrosis. The patient had a history of a remote parathyroidectomy for hyperparathyroidism; however, the parathyroid hormone (PTH) and the calcium levels were still mildly elevated. No other calcified lung lesions had developed in a follow-up after the initial resection. Pulmonary calcification has been classically associated with varicella pneumonia; no viral cytopathic changes were identified for varicella or other viruses in this case. The calcification appears to be secondary to the recent Pseudomonas pneumonia. To our knowledge, this is the first report of a Pseudomonas pneumonia resulting in extensive localized pulmonary calcification. This is an important diagnostic consideration as this benign entity should be considered in patients with persistent opacities following treatment for pneumonia.
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- 2017
17. Multiple molecular interactions redundantly contribute to RB-mediated cell cycle control
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Srikanth Talluri, Frederick A. Dick, Michael J. Thwaites, Daniel Thompsen Passos, Matthew J. Cecchini, and Jasmyne Carnevale
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0301 basic medicine ,Cell cycle checkpoint ,Regulator ,Cell cycle ,Biology ,medicine.disease_cause ,Biochemistry ,law.invention ,03 medical and health sciences ,law ,medicine ,Molecular Biology ,Mutation ,Structure-function ,DNA synthesis ,Structure–function ,Retinoblastoma ,Research ,Tumor suppressor ,Cell Biology ,medicine.disease ,Cell biology ,030104 developmental biology ,Suppressor ,biological phenomena, cell phenomena, and immunity ,Systems biology ,Carcinogenesis - Abstract
Background: The G1-S phase transition is critical to maintaining proliferative control and preventing carcinogenesis. The retinoblastoma tumor suppressor is a key regulator of this step in the cell cycle. Results: Here we use a structure-function approach to evaluate the contributions of multiple protein interaction surfaces on pRB towards cell cycle regulation. SAOS2 cell cycle arrest assays showed that disruption of three separate binding surfaces were necessary to inhibit pRB-mediated cell cycle control. Surprisingly, mutation of some interaction surfaces had no effect on their own. Rather, they only contributed to cell cycle arrest in the absence of other pRB dependent arrest functions. Specifically, our data shows that pRB-E2F interactions are competitive with pRB-CDH1 interactions, implying that interchangeable growth arrest functions underlie pRB's ability to block proliferation. Additionally, disruption of similar cell cycle control mechanisms in genetically modified mutant mice results in ectopic DNA synthesis in the liver. Conclusions: Our work demonstrates that pRB utilizes a network of mechanisms to prevent cell cycle entry. This has important implications for the use of new CDK4/6 inhibitors that aim to activate this proliferative control network.
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- 2017
18. An RB-EZH2 Complex Mediates Silencing of Repetitive DNA Sequences
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Aren E. Marshall, Ian Welch, Sara Ferwati, Seung J. Kim, William A. MacDonald, Matthew J. Cecchini, Daniel Thompsen Passos, Frederick A. Dick, Mellissa R.W. Mann, Charles A. Ishak, Christopher J. Howlett, Carlee R. White, and Seth M. Rubin
- Subjects
0301 basic medicine ,Lymphoma ,H3K27me3 ,Endogenous retrovirus ,medicine.disease_cause ,retinoblastoma protein ,Retinoblastoma Protein ,Medical and Health Sciences ,Repetitive Sequences ,Histones ,Mice ,2.1 Biological and endogenous factors ,Direct repeat ,Mesentery ,Aetiology ,Genetics ,Mutation ,Genome ,Liver Neoplasms ,Biological Sciences ,Protein Binding ,Transposable element ,Carcinoma, Hepatocellular ,Heterochromatin ,1.1 Normal biological development and functioning ,Interspersed repeat ,Primary Cell Culture ,macromolecular substances ,Biology ,Article ,03 medical and health sciences ,Rare Diseases ,Clinical Research ,Underpinning research ,medicine ,Constitutive heterochromatin ,Animals ,cancer ,Genetic Predisposition to Disease ,Enhancer of Zeste Homolog 2 Protein ,Gene Silencing ,Repeated sequence ,Molecular Biology ,Repetitive Sequences, Nucleic Acid ,Nucleic Acid ,epigenetics ,Splenic Neoplasms ,repetitive DNA ,Human Genome ,Carcinoma ,heterochromatin ,Hepatocellular ,DNA ,Cell Biology ,Fibroblasts ,Survival Analysis ,Polycomb ,030104 developmental biology ,E2F1 Transcription Factor ,Developmental Biology - Abstract
Repetitive genomic regions include tandem sequence repeats and interspersed repeats, such as endogenous retroviruses and LINE-1 elements. Repressive heterochromatin domains silence expression of these sequences through mechanisms that remain poorly understood. Here, we present evidence that the retinoblastoma protein (pRB) utilizes a cell-cycle-independent interaction with E2F1 to recruit enhancer of zeste homolog 2 (EZH2) to diverse repeat sequences. These include simple repeats, satellites, LINEs, and endogenous retroviruses as well as transposon fragments. We generated a mutant mouse strain carrying an F832A mutation in Rb1 that is defective for recruitment to repetitive sequences. Loss of pRB-EZH2 complexes from repeats disperses H3K27me3 from these genomic locations and permits repeat expression. Consistent with maintenance of H3K27me3 at the Hox clusters, these mice are developmentally normal. However, susceptibility to lymphoma suggests that pRB-EZH2 recruitment to repetitive elements may be cancer relevant.
- Published
- 2016
19. Interchangeable Roles for E2F Transcriptional Repression by the Retinoblastoma Protein and p27KIP1-Cyclin-Dependent Kinase Regulation in Cell Cycle Control and Tumor Suppression
- Author
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Michael J. Thwaites, Ian Welch, Daniel Thompsen Passos, Matthew J. Cecchini, and Frederick A. Dick
- Subjects
0301 basic medicine ,Cell cycle checkpoint ,Transcription, Genetic ,Tumor suppressor genes ,CDK ,Cell cycle ,Radiation Tolerance ,Retinoblastoma Protein ,Culture Media, Serum-Free ,Retinoblastoma-like protein 1 ,03 medical and health sciences ,Mice ,0302 clinical medicine ,E2F ,Cyclin-dependent kinase ,Neoplasms ,Transcriptional regulation ,Animals ,DNA damage checkpoints ,Molecular Biology ,Psychological repression ,Cell Line, Transformed ,biology ,Protein Stability ,Retinoblastoma protein ,Tumor suppressor ,Cell Biology ,Cell Cycle Checkpoints ,DNA ,Cyclin-dependent kinases ,Fibroblasts ,Embryo, Mammalian ,Cell biology ,E2F Transcription Factors ,Oxidative Stress ,030104 developmental biology ,030220 oncology & carcinogenesis ,Pituitary Gland ,Protein Biosynthesis ,Mutation ,biology.protein ,DNA damage ,biological phenomena, cell phenomena, and immunity ,Cyclin-Dependent Kinase Inhibitor p27 ,DNA Damage ,Research Article - Abstract
The mammalian G1-S phase transition is controlled by the opposing forces of cyclin-dependent kinases (CDK) and the retinoblastoma protein (pRB). Here, we present evidence for systems-level control of cell cycle arrest by pRB-E2F and p27-CDK regulation. By introducing a point mutant allele of pRB that is defective for E2F repression (Rb1G) into a p27KIP1 null background (Cdkn1b-/-), both E2F transcriptional repression and CDK regulation are compromised. These double-mutant Rb1G/G; Cdkn1b-/- mice are viable and phenocopy Rb1+/- mice in developing pituitary adenocarcinomas, even though neither single mutant strain is cancer prone. Combined loss of pRB-E2F transcriptional regulation and p27KIP1 leads to defective proliferative control in response to various types of DNA damage. In addition, Rb1G/G; Cdkn1b-/- fibroblasts immortalize faster in culture and more frequently than either single mutant genotype. Importantly, the synthetic DNA damage arrest defect caused by Rb1G/G; Cdkn1b-/- mutations is evident in the developing intermediate pituitary lobe where tumors ultimately arise. Our work identifies a unique relationship between pRB-E2F and p27-CDK control and offers in vivo evidence that pRB is capable of cell cycle control through E2F-independent effects.
- Published
- 2016
20. A Single Institution Consensus on the Use of Sequential or Concurrent Hormonal Therapy for Breast Cancer Patients Receiving Radiation Therapy
- Author
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Brian Yaremko, Kylea Potvin, David D'Souza, R. Gabriel Boldt, Edward Yu, Tracy Sexton, Matthew J. Cecchini, Michael Lock, and Muriel Brackstone
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medicine.medical_specialty ,medicine.medical_treatment ,Delphi method ,aromatase inhibitors ,03 medical and health sciences ,0302 clinical medicine ,Breast cancer ,breast cancer ,medicine ,030212 general & internal medicine ,Intensive care medicine ,Adverse effect ,hormone therapy ,tamoxifen ,business.industry ,General Engineering ,medicine.disease ,Confidence interval ,Surgery ,Radiation therapy ,Oncology ,030220 oncology & carcinogenesis ,Radiation Oncology ,Hormonal therapy ,Hormone therapy ,concurrent ,business ,sequential ,Tamoxifen ,medicine.drug - Abstract
Background and objectives: For hormone-sensitive breast cancers, treatment with breast-conserving surgery, tamoxifen, or aromatase inhibitors, along with adjuvant radiation, is the mainstay of therapy. The ideal timing of hormonal and radiation treatment is not well defined, and there is a significant degree of practice variability between concurrent and sequential treatment regimes. This variability can cause confusion amongst the clinical team resulting in contradictory recommendations, loss of patient trust, and the potential for missed initiation of hormonal therapy. Methods: To address this question, a systematic review of the literature was conducted and presented to the breast cancer multidisciplinary team at the London Regional Cancer Center. A three-round modified Delphi method was used to obtain a consensus on a series of a priori determined statements. Results: With the currently available evidence, the consensus was that hormonal therapy should be given sequentially after radiation. This will limit potential overlapping adverse effects between hormonal therapy and radiation that may decrease completion of treatment. The sequential approach has not been associated with any harm in clinical outcomes, and there is some suggestion of increased toxicity with concurrent use. However, in patients at high risk of distant recurrence, they felt it would be reasonable to consider concurrent treatment to avoid any delay in therapy. Conclusion: The consensus of our institution to utilize a sequential approach will standardize the treatment decisions and reduce the risk of failing to initiate hormonal therapy. Despite the lack of level 1 evidence, the Delphi methodology did provide a high level of confidence for our group to choose the sequential approach. The consensus was developed after a review of the literature revealed that there was no clear superiority of one schedule over the other and evidence that concurrent treatment may increase adverse events.
- Published
- 2016
21. Inhibition of pluripotency networks by the Rb tumor suppressor restricts reprogramming and tumorigenesis
- Author
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Steven E. Artandi, Anne Flore Zmoos, Damek V. Spacek, Luis F.Z. Batista, Anne Brunet, Laura L. Gorges, Michael S. Kareta, Samuele Marro, Matthew J. Cecchini, Yi Han Ng, Dedeepya Vaka, Bérénice A. Benayoun, Sana Hafeez, Frederick A. Dick, Julien Sage, Cheen Euong Ang, Marius Wernig, and Megan O'Brien
- Subjects
Tumor suppressor gene ,Carcinogenesis ,Cellular differentiation ,Induced Pluripotent Stem Cells ,Biology ,medicine.disease_cause ,Retinoblastoma Protein ,Article ,03 medical and health sciences ,Mice ,0302 clinical medicine ,Cyclin D1 ,SOX2 ,medicine ,Genetics ,Animals ,Humans ,Induced pluripotent stem cell ,030304 developmental biology ,Homeodomain Proteins ,0303 health sciences ,SOXB1 Transcription Factors ,Cell Cycle ,Retinoblastoma protein ,Cell Biology ,Nanog Homeobox Protein ,Fibroblasts ,Cellular Reprogramming ,Chromatin ,Repressor Proteins ,030220 oncology & carcinogenesis ,Cancer research ,biology.protein ,Molecular Medicine ,Reprogramming ,Octamer Transcription Factor-3 ,Protein Binding - Abstract
SummaryMutations in the retinoblastoma tumor suppressor gene Rb are involved in many forms of human cancer. In this study, we investigated the early consequences of inactivating Rb in the context of cellular reprogramming. We found that Rb inactivation promotes the reprogramming of differentiated cells to a pluripotent state. Unexpectedly, this effect is cell cycle independent, and instead reflects direct binding of Rb to pluripotency genes, including Sox2 and Oct4, which leads to a repressed chromatin state. More broadly, this regulation of pluripotency networks and Sox2 in particular is critical for the initiation of tumors upon loss of Rb in mice. These studies therefore identify Rb as a global transcriptional repressor of pluripotency networks, providing a molecular basis for previous reports about its involvement in cell fate pliability, and implicate misregulation of pluripotency factors such as Sox2 in tumorigenesis related to loss of Rb function.
- Published
- 2013
22. Analysis of Cell Cycle Position in Mammalian Cells
- Author
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Mehdi Amiri, Matthew J. Cecchini, and Frederick A. Dick
- Subjects
Cell cycle checkpoint ,Molecular biology ,Issue 59 ,General Chemical Engineering ,proliferation ,Cell ,Proliferation ,Cytological Techniques ,Biology ,Cell cycle ,General Biochemistry, Genetics and Molecular Biology ,Fluorescence ,03 medical and health sciences ,chemistry.chemical_compound ,Mice ,0302 clinical medicine ,Cell Line, Tumor ,medicine ,Animals ,Humans ,Propidium iodide ,Flow cytometry ,Molecular Biology ,030304 developmental biology ,0303 health sciences ,General Immunology and Microbiology ,DNA synthesis ,Staining and Labeling ,Cell growth ,General Neuroscience ,flow cytometry ,Cell Cycle ,Transfection ,Cell Cycle Checkpoints ,Cell biology ,medicine.anatomical_structure ,chemistry ,Cell culture ,030220 oncology & carcinogenesis ,fluorescence - Abstract
The regulation of cell proliferation is central to tissue morphogenesis during the development of multicellular organisms. Furthermore, loss of control of cell proliferation underlies the pathology of diseases like cancer. As such there is great need to be able to investigate cell proliferation and quantitate the proportion of cells in each phase of the cell cycle. It is also of vital importance to indistinguishably identify cells that are replicating their DNA within a larger population. Since a cell′s decision to proliferate is made in the G1 phase immediately before initiating DNA synthesis and progressing through the rest of the cell cycle, detection of DNA synthesis at this stage allows for an unambiguous determination of the status of growth regulation in cell culture experiments. DNA content in cells can be readily quantitated by flow cytometry of cells stained with propidium iodide, a fluorescent DNA intercalating dye. Similarly, active DNA synthesis can be quantitated by culturing cells in the presence of radioactive thymidine, harvesting the cells, and measuring the incorporation of radioactivity into an acid insoluble fraction. We have considerable expertise with cell cycle analysis and recommend a different approach. We Investigate cell proliferation using bromodeoxyuridine/fluorodeoxyuridine (abbreviated simply as BrdU) staining that detects the incorporation of these thymine analogs into recently synthesized DNA. Labeling and staining cells with BrdU, combined with total DNA staining by propidium iodide and analysis by flow cytometry1 offers the most accurate measure of cells in the various stages of the cell cycle. It is our preferred method because it combines the detection of active DNA synthesis, through antibody based staining of BrdU, with total DNA content from propidium iodide. This allows for the clear separation of cells in G1 from early S phase, or late S phase from G2/M. Furthermore, this approach can be utilized to investigate the effects of many different cell stimuli and pharmacologic agents on the regulation of progression through these different cell cycle phases. In this report we describe methods for labeling and staining cultured cells, as well as their analysis by flow cytometry. We also include experimental examples of how this method can be used to measure the effects of growth inhibiting signals from cytokines such as TGF-β1, and proliferative inhibitors such as the cyclin dependent kinase inhibitor, p27KIP1. We also include an alternate protocol that allows for the analysis of cell cycle position in a sub-population of cells within a larger culture5. In this case, we demonstrate how to detect a cell cycle arrest in cells transfected with the retinoblastoma gene even when greatly outnumbered by untransfected cells in the same culture. These examples illustrate the many ways that DNA staining and flow cytometry can be utilized and adapted to investigate fundamental questions of mammalian cell cycle control. © 2012 Creative Commons Attribution License.
- Published
- 2012
23. An Overlapping Kinase and Phosphatase Docking Site Regulates Activity of the Retinoblastoma Protein
- Author
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Seth M. Rubin, Michael Schamber, Rachel C. Steinhardt, Frederick A. Dick, Matthew J. Cecchini, and Alexander Hirschi
- Subjects
Models, Molecular ,Phosphatase ,Crystallography, X-Ray ,Retinoblastoma Protein ,Biochemistry ,Article ,Cell Line ,03 medical and health sciences ,Cell and Developmental Biology ,0302 clinical medicine ,Structural Biology ,Cyclin-dependent kinase ,Models ,Protein Phosphatase 1 ,Humans ,Protein Interaction Domains and Motifs ,Phosphorylation ,Molecular Biology ,030304 developmental biology ,0303 health sciences ,Crystallography ,biology ,Kinase ,Cyclin-dependent kinase 2 ,Cell Cycle ,Cyclin-Dependent Kinase 2 ,Retinoblastoma protein ,Molecular ,Protein phosphatase 1 ,Cell biology ,Chemistry ,Docking (molecular) ,030220 oncology & carcinogenesis ,biology.protein ,X-Ray ,Protein Binding - Abstract
The phosphorylation state and corresponding activity of the retinoblastoma tumor suppressor protein (Rb) are modulated by a balance of kinase and phosphatase activities. Here we characterize the association of Rb with the catalytic subunit of protein phosphatase 1 (PP1c). A crystal structure identifies an enzyme docking site in the Rb C-terminal domain that is required for efficient PP1c activity toward Rb. The phosphatase docking site overlaps with the known docking site for cyclin-dependent kinase (Cdk), and PP1 competition with Cdk-cyclins for Rb binding is sufficient to retain Rb activity and block cell-cycle advancement. These results provide the first detailed molecular insights into Rb activation and establish a novel mechanism for Rb regulation in which kinase and phosphatase compete for substrate docking.
- Published
- 2010
24. E-Cigarette or Vaping Product Use-Associated Lung Injury: A Review for Pathologists
- Author
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Sara E. Monaco, Henry D. Tazelaar, Anjali Saqi, Andrea Arrossi, Maxwell L. Smith, Stefan E. Pambuccian, Yasmeen M. Butt, Matthew J. Cecchini, Mary Beth Beasley, Kirk D. Jones, Sanjay Mukhopadhyay, Mitra Mehrad, and Brandon T. Larsen
- Subjects
medicine.medical_specialty ,Biopsy ,Acute Lung Injury ,030204 cardiovascular system & hematology ,Lung injury ,Electronic Nicotine Delivery Systems ,Lung pathology ,Pathology and Forensic Medicine ,Nicotine ,03 medical and health sciences ,0302 clinical medicine ,medicine ,Humans ,030212 general & internal medicine ,Dronabinol ,Lung ,Cannabinoid Receptor Agonists ,Respiratory illness ,medicine.diagnostic_test ,Inhalation ,business.industry ,Cannabinoids ,Macrophages ,Vaping ,Smoking ,General Medicine ,Pathologists ,Medical Laboratory Technology ,Emergency medicine ,business ,medicine.drug - Abstract
Context.— Vaping is the inhalation of heated aerosol from a small battery-powered device as a method to deliver nicotine or other substances. A recent outbreak of severe respiratory illness primarily in the United States has put a spotlight on vaping and its potential risks. Objective.— To familiarize pathologists with vaping, the cytologic and histopathologic features of vaping-associated acute lung injury, and the role of pathology in this diagnosis. Data Sources.— A targeted literature review was performed. Conclusions.— Most cases of vaping-associated lung injury have been linked to vaping products containing tetrahydrocannabinol or other cannabinoids. Lung biopsies show a spectrum of nonspecific acute lung injury patterns (organizing pneumonia, diffuse alveolar damage, acute fibrinous, and organizing pneumonia, or combinations of the above), accompanied by prominent, foamy macrophage accumulation. Injury is usually accentuated around small airways. Lipid-laden macrophages can be identified in bronchioloalveolar lavage fluid in most patients and these can be highlighted using lipid stains, such as oil red O, but the clinical utility of this finding remains unclear, as lipid-laden macrophages can be seen in a wide variety of processes and should not be relied upon to make the diagnosis. Classic histologic features of exogenous lipoid pneumonia have not been identified in tissue samples. Lightly pigmented macrophages, similar to those seen with traditional cigarette smoking, are present in some cases but are usually a minor feature. To date, no specific pathologic features for vaping-related injury have been identified, and it remains a diagnosis of exclusion that requires clinicopathologic correlation.
- Published
- 2010
25. An Overlapping Kinase and Phosphatase Docking Site Regulates Activity of the Retinoblastoma Protein
- Author
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Alexander Hirschi, Seth M. Rubin, Frederick A. Dick, Matthew J. Cecchini, and Rachel C. Steinhardt
- Subjects
0303 health sciences ,biology ,Kinase ,Chemistry ,Phosphatase ,Retinoblastoma protein ,Biophysics ,Cell cycle ,Cell biology ,Dephosphorylation ,enzymes and coenzymes (carbohydrates) ,03 medical and health sciences ,0302 clinical medicine ,Cyclin-dependent kinase ,Docking (molecular) ,030220 oncology & carcinogenesis ,biology.protein ,Phosphorylation ,030304 developmental biology - Abstract
Insights into the molecular mechanisms that regulate the phosphorylation state and corresponding activity of the retinoblastoma tumor suppressor protein (Rb) are fundamental to understanding the control of cell proliferation. While much focus has been placed upon regulation of Cyclin-dependent kinase (Cdk) activity towards Rb, less is known about Rb dephosphorylation catalyzed by the major Rb phosphatase, protein phosphatase-1 (PP1). Using x-ray crystallography, we have determined the crystal structure of a PP1:Rb peptide complex to 3.2A that reveals an overlapping kinase and phosphatase docking site. Kinetic assays show that Cdk and PP1 docking to Rb are mutually exclusive and that this docking site is required for efficient dephosphorylation, as well as phosphorylation of Rb. Cell cycle arrest assays demonstrate that the ability of PP1 to compete with Cdks is sufficient to retain Rb activity and block cell cycle advancement. These results establish a novel mechanism for the regulation of Rb phosphorylation state in which kinase and phosphatase compete for substrate docking.
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