1. Optical clearing potential of immersion-based agents applied to thick mouse brain sections
- Author
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Christian Crouzet, Vitaly Vasilevko, Adrian Bahani, Bernard Choi, and Mathew Loren
- Subjects
Male ,0301 basic medicine ,Fluorescence-lifetime imaging microscopy ,Confocal Microscopy ,Light ,Biochemistry ,law.invention ,Mice ,Fluorescence Microscopy ,0302 clinical medicine ,law ,Lectins ,Fluorescence microscope ,Scattering, Radiation ,Microscopy ,Multidisciplinary ,Physics ,Electromagnetic Radiation ,Histological Techniques ,Microvascular Density ,Light Microscopy ,Brain ,Neurodegenerative Diseases ,Chemistry ,Tissue Clearing ,Physical Sciences ,Medicine ,Research Article ,Azides ,Visible Light ,Materials science ,Imaging Techniques ,General Science & Technology ,Science ,Neuroimaging ,Research and Analysis Methods ,Vascular architecture ,03 medical and health sciences ,Sample volume ,Optical clearing ,Confocal microscopy ,Fluorescence Imaging ,MD Multidisciplinary ,Immersion (virtual reality) ,Animals ,Chemical Compounds ,Biology and Life Sciences ,Proteins ,eye diseases ,030104 developmental biology ,Specimen Preparation and Treatment ,Microvessels ,030217 neurology & neurosurgery ,Neuroscience ,Biomedical engineering - Abstract
We have previously demonstrated that the use of a commercially-available immersion-based optical clearing agent (OCA) enables, within 3-6 hours, three-dimensional visualization of subsurface exogenous fluorescent and absorbing markers of vascular architecture and neurodegenerative disease in thick (0.5-1.0mm) mouse brain sections. Nonetheless, the relative performance of immersion-based OCAs has remained unknown. Here, we show that immersion of brain sections in specific OCAs (FocusClear, RIMS, sRIMS, or ScaleSQ) affects both their transparency and volume; the optical clearing effect occurs over the entire visible spectrum and is reversible; and that ScaleSQ had the highest optical clearing potential and increase in imaging depth of the four evaluated OCAs, albeit with the largest change in sample volume and a concomitant decrease in apparent microvascular density of the sample. These results suggest a rational, quantitative framework for screening and characterization of the impact of optical clearing, to streamline experimental design and enable a cost-benefit assessment.
- Published
- 2019
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