1. Comparison of Droplet Digital PCR versus qPCR Measurements on the International Scale for the Molecular Monitoring of Chronic Myeloid Leukemia Patients
- Author
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Mireia Atance, Rocio Sanchez, Susana Olmedillas, José Luis López-Lorenzo, Daniel Lainez-González, Mariano García Arranz, Juana Serrano-López, Amanda García, Rodrigo Iñiguez, Juan-Manuel Alonso-Domínguez, Alicia Arenas Cortés, Tamara Castaño, Carlos Blas Lopez, and Pilar Llamas Sillero
- Subjects
0301 basic medicine ,Oncology ,medicine.medical_specialty ,Correlation coefficient ,International scale ,Fusion Proteins, bcr-abl ,Real-Time Polymerase Chain Reaction ,Sensitivity and Specificity ,03 medical and health sciences ,0302 clinical medicine ,McNemar's test ,Gene Frequency ,Leukemia, Myelogenous, Chronic, BCR-ABL Positive ,hemic and lymphatic diseases ,Internal medicine ,Biomarkers, Tumor ,Genetics ,medicine ,Humans ,Digital polymerase chain reaction ,Alleles ,Pharmacology ,business.industry ,Reproducibility of Results ,Myeloid leukemia ,General Medicine ,Confidence interval ,030104 developmental biology ,Concordance correlation coefficient ,Real-time polymerase chain reaction ,030220 oncology & carcinogenesis ,Molecular Medicine ,business - Abstract
BCR-ABL1/ABL1 p210 measurement by quantitative polymerase chain reaction (qPCR) is used worldwide to monitor the molecular response in chronic myeloid leukemia (CML) patients. Droplet digital polymerase chain reaction (ddPCR) seems to show a greater sensitivity than qPCR, probably due to the high number of replicates analyzed in ddPCR for the comparison. Additionally, in a recently published comparison, ddPCR measurements were not adequately transformed into International Scale (IS). We have analyzed 50 CML patients and ten non-CML donors in parallel by qPCR and ddPCR. To the best of our knowledge, this is the first study comparing both techniques under similar conditions, with BCR-ABL1/ABL1 measurements performed via both techniques transformed into IS. Qualitative and quantitative comparisons showed excellent results. The qualitative correlation showed a Kappa index of 0.94 (95% confidence interval [CI] 0.90–0.98) (P
- Published
- 2020
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