1. 1H, 13C and 15N backbone chemical shift assignments of SARS-CoV-2 nsp3a
- Author
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Laura Mariño Perez, Serafima Guseva, Martin Blackledge, Martin Hengesbach, Harald Schwalbe, Aldo R. Camacho-Zarco, Andreas Schlundt, Luiza Mamigonian Bessa, Anas Malki, Sophie Marianne Korn, Damien Maurin, Nicola Salvi, Institut de biologie structurale (IBS - UMR 5075), Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche Interdisciplinaire de Grenoble (IRIG), Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Grenoble Alpes (UGA), Institute for Organic Chemistry and Chemical Biology, Institute of Biophysical Chemistry, Center for Biomolecular Magnetic Resonance (BMRZ), and ANR-17-EURE-0003,CBH-EUR-GS,CBH-EUR-GS(2017)
- Subjects
0303 health sciences ,Viral Components ,[SDV.BBM.BS]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Structural Biology [q-bio.BM] ,Stereochemistry ,Chemistry ,SARS-CoV-2 ,Chemical shift ,Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) ,Vesicle ,viruses ,030303 biophysics ,Context (language use) ,Biochemistry ,Article ,Nucleoprotein ,03 medical and health sciences ,Viral replication ,Structural Biology ,Intrinsically disordered protein ,Transcription preinitiation complex ,Covid-19 ,030304 developmental biology - Abstract
International audience; The non-structural protein nsp3 from SARS-CoV-2 plays an essential role in the viral replication transcription complex. Nsp3a constitutes the N-terminal domain of nsp3, comprising a ubiquitin-like folded domain and a disordered acidic chain. This region of nsp3a has been linked to interactions with the viral nucleoprotein and the structure of double membrane vesicles. Here, we report the backbone resonance assignment of both domains of nsp3a. The study is carried out in the context of the international covid19-nmr consortium, which aims to characterize SARS-CoV-2 proteins and RNAs, providing for example NMR chemical shift assignments of the different viral components. Our assignment will provide the basis for the identification of inhibitors and further functional and interaction studies of this essential protein.
- Published
- 2021
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