9 results on '"Li, Yanwen"'
Search Results
2. Proposal of serovars 17 and 18 of Actinobacillus pleuropneumoniae based on serological and genotypic analysis.
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Bossé, Janine T., Li, Yanwen, Sárközi, Rita, Fodor, László, Lacouture, Sonia, Gottschalk, Marcelo, Casas Amoribieta, Maria, Angen, Øystein, Nedbalcova, Katerina, Holden, Matthew T.G., Maskell, Duncan J., Tucker, Alexander W., Wren, Brendan W., Rycroft, Andrew N., and Langford, Paul R.
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ACTINOBACILLUS pleuropneumoniae , *NUCLEOTIDE sequencing , *MOLECULAR diagnosis , *IMMUNE serums , *LABORATORY rabbits - Abstract
The aim of this study was to investigate isolates of Actinobacillus pleuropneumoniae previously designated serologically either as non-typable (NT) or as ‘K2:07’, which did not produce serovar-specific amplicons in PCR assays. We used whole genome sequencing to identify the capsule (CPS) loci of six previously designated biovar 1 NT and two biovar 1 ‘K2:O7’ isolates of A. pleuropneumoniae from Denmark, as well as a recent biovar 2 NT isolate from Canada. All of the NT isolates have the same six-gene type I CPS locus, sharing common cpsABC genes with serovars 2, 3, 6, 7, 8, 9, 11 and 13. The two ‘K2:O7’ isolates contain a unique three-gene type II CPS locus, having a cpsA gene similar to that of serovars 1, 4, 12, 14 and 15. The previously NT isolates share the same O-antigen genes, found between erpA and rpsU , as serovars 3, 6, 8, and 15. Whereas the ‘K2:O7’ isolates, have the same O-antigen genes as serovar 7, which likely contributed to their previous mis-identification. All of the NT and ‘K2:O7’ isolates have only the genes required for production of ApxII ( apxIICA structural genes, and apxIBD export genes). Rabbit polyclonal antisera raised against representative isolates with these new CPS loci demonstrated distinct reactivity compared to the 16 known serovars. The serological and genomic results indicate that the isolates constitute new serovars 17 (previously NT) and 18 (previously ‘K2:O7’). Primers designed for amplification of specific serovar 17 and 18 sequences for molecular diagnostics will facilitate epidemiological tracking of these two new serovars of A. pleuropneumoniae. [ABSTRACT FROM AUTHOR]
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- 2018
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3. Characterisation of a mobilisable plasmid conferring florfenicol and chloramphenicol resistance in Actinobacillus pleuropneumoniae.
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Bossé, Janine T, Li, Yanwen, Atherton, Tom G, Walker, Stephanie, Williamson, Susanna M, Rogers, Jon, Chaudhuri, Roy R, Weinert, Lucy A, Holden, Matthew TG, Maskell, Duncan J, Tucker, Alexander W, Wren, Brendan W, Rycroft, Andrew N, and Langford, Paul R
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ACTINOBACILLUS pleuropneumoniae , *PASTEURELLACEAE , *PLASMIDS , *CHLORAMPHENICOL , *NUCLEOTIDE sequence , *VETERINARY microbiology , *DRUG resistance - Abstract
The complete nucleotide sequence of a 7.7 kb mobilisable plasmid (pM3446F), isolated from a florfenicol resistant isolate of Actinobacillus pleuropneumoniae , showed extended similarity to plasmids found in other members of the Pasteurellaceae containing the floR gene as well as replication and mobilisation genes. Mobilisation into other Pasteurellaceae species confirmed that this plasmid can be transferred horizontally. [ABSTRACT FROM AUTHOR]
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- 2015
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4. Application of the MISTEACHING(S) disease susceptibility framework to Actinobacillus pleuropneumoniae to identify research gaps: an exemplar of a veterinary pathogen.
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Langford, Paul R., Stringer, Oliver W., Li, Yanwen, and Bossé, Janine T.
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ACTINOBACILLUS pleuropneumoniae , *DISEASE susceptibility , *PATHOGENIC microorganisms - Abstract
Historically, the MISTEACHING (microbiome, immunity, sex, temperature, environment, age, chance, history, inoculum, nutrition, genetics) framework to describe the outcome of host−pathogen interaction, has been applied to human pathogens. Here, we show, using Actinobacillus pleuropneumoniae as an exemplar, that the MISTEACHING framework can be applied to a strict veterinary pathogen, enabling the identification of major research gaps, the formulation of hypotheses whose study will lead to a greater understanding of pathogenic mechanisms, and/or improved prevention/therapeutic measures. We also suggest that the MISTEACHING framework should be extended with the inclusion of a 'strain' category, to become MISTEACHINGS. We conclude that the MISTEACHINGS framework can be applied to veterinary pathogens, whether they be bacteria, fungi, viruses, or parasites, and hope to stimulate others to use it to identify research gaps and to formulate hypotheses worthy of study with their own pathogens. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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5. PluMu—A Mu-like Bacteriophage Infecting Actinobacillus pleuropneumoniae.
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Bartsch, Lee Julia, Fernandez Crespo, Roberto, Wang, Yunfei, Skinner, Michael A., Rycroft, Andrew N., Cooley, William, Everest, David J., Li, Yanwen, Bossé, Janine T., and Langford, Paul R.
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ACTINOBACILLUS pleuropneumoniae , *BACTERIOPHAGES , *POLYETHYLENE glycol , *TRANSMISSION electron microscopy , *MICROBIAL virulence - Abstract
Actinobacillus pleuropneumoniae is the causative agent of pleuropneumonia, an economically important lung disease in pigs. In draft genomes of two Cypriot clinical A. pleuropneumoniae isolates (MIDG3457 and MIDG3459), we previously identified single genomic regions with homology to Mu-like bacteriophage and presented preliminary evidence of active phage. Here, updated Phastest genomic analysis identified two loci in both MIDG3457 and MIDG3459 that were predicted to encode proteins with high homology to, and whose organisation was characteristic of, Mu-like phages. Phylogenetically, the closest matches were with Mannheimia Vb and Glaesserella SuMu phages. Phastest scored the loci as "complete", indicating they produced active phage. PCR amplification of the Mu-like phage c and tail genes from DNase-treated polyethylene glycol 8000 (PEG)-precipitated supernatants of MIDG3457 and MIDG3459 (grown in either Brain Heart Infusion-NAD or Grace's Insect Medium-NAD broth) indicated the presence of intact virions. The phages from MIDG3457 and MIDG3459 were named PluMu 3457-1, 3457-2, and PluMu 3459-1 and PluMu 3459-2, respectively. Transmission electron microscopy (TEM) of the PEG-precipitated supernatants of broth-grown MIDG3459 identified virions with icosahedral heads and tails, consistent with other Mu-like phages. We conclude that MIDG3459 produces an active Mu-like phage. [ABSTRACT FROM AUTHOR]
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- 2024
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6. The Generation of Successive Unmarked Mutations and Chromosomal Insertion of Heterologous Genes in Actinobacillus pleuropneumoniae Using Natural Transformation.
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Bossé, Janine T., Soares-Bazzolli, Denise M., Li, Yanwen, Wren, Brendan W., Tucker, Alexander W., Maskell, Duncan J., Rycroft, Andrew N., Langford, Paul R., and null, null
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ACTINOBACILLUS pleuropneumoniae , *CHROMOSOMES , *PLASMIDS , *DNA , *CHLORAMPHENICOL , *MOLECULAR genetics - Abstract
We have developed a simple method of generating scarless, unmarked mutations in Actinobacillus pleuropneumoniae by exploiting the ability of this bacterium to undergo natural transformation, and with no need to introduce plasmids encoding recombinases or resolvases. This method involves two successive rounds of natural transformation using linear DNA: the first introduces a cassette carrying cat (which allows selection by chloramphenicol) and sacB (which allows counter-selection using sucrose) flanked by sequences to either side of the target gene; the second transformation utilises the flanking sequences ligated directly to each other in order to remove the cat-sacB cassette. In order to ensure efficient uptake of the target DNA during transformation, A. pleuropneumoniae uptake sequences are added into the constructs used in both rounds of transformation. This method can be used to generate multiple successive deletions and can also be used to introduce targeted point mutations or insertions of heterologous genes into the A. pleuropneumoniae chromosome for development of live attenuated vaccine strains. So far, we have applied this method to highly transformable isolates of serovars 8 (MIDG2331), which is the most prevalent in the UK, and 15 (HS143). By screening clinical isolates of other serovars, it should be possible to identify other amenable strains. [ABSTRACT FROM AUTHOR]
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- 2014
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7. Serovar-dependent differences in Hfq-regulated phenotypes in Actinobacillus pleuropneumoniae.
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Crispim, Josicelli Souza, da Silva, Thyara Ferreira, Sanches, Newton Moreno, da Silva, Giarlã Cunha, Pereira, Monalessa Fábia, Rossi, Ciro César, Li, Yanwen, Terra, Vanessa Sofia, Vohra, Prerna, Wren, Brendan W, Langford, Paul R, Bossé, Janine T, and Bazzolli, Denise Mara Soares
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ACTINOBACILLUS , *ACTINOBACILLUS pleuropneumoniae , *GREATER wax moth , *PHENOTYPES , *GENETIC regulation - Abstract
The RNA chaperone Hfq regulates diverse processes in numerous bacteria. In this study, we compared phenotypes (growth rate, adherence, response to different stress conditions and virulence in Galleria mellonella) of wild-type (WT) and isogenic hfq mutants of three serovars (1, 8 and 15) of the porcine pathogen Actinobacillus pleuropneumoniae. Similar growth in rich broth was seen for all strains except Ap1∆ hfq , which showed slightly reduced growth throughout the 24 h time course, and the complemented Ap8∆ hfq C mutant had a prolonged lag phase. Differences were seen between the three serovar WT strains regarding adherence, stress response and virulence in G. mellonella , and deletion of hfq affected some, but not all of these phenotypes, depending on serovar. Complementation by expression of cloned hfq from an endogenous promoter only restored some WT phenotypes, indicating that complex regulatory networks may be involved, and that levels of Hfq may be as important as presence/absence of the protein regarding its contribution to gene regulation. Our results support that Hfq is a pleiotropic global regulator in A. pleuropneumoniae , but serovar-related differences exist. These results highlight the importance of testing multiple strains/serovars within a given species when determining contributions of global regulators, such as Hfq, to expression of complex phenotypes. [ABSTRACT FROM AUTHOR]
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- 2020
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8. Characterization of the Actinobacillus pleuropneumoniae SXT-related integrative and conjugative element ICEApl2 and analysis of the encoded FloR protein: hydrophobic residues in transmembrane domains contribute dynamically to florfenicol and chloramphenicol efflux.
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Yinghui Li, Yanwen Li, Fernandez Crespo, Roberto, Leanse, Leon G., Langford, Paul R., Bossé, Janine T., Li, Yinghui, and Li, Yanwen
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ACTINOBACILLUS pleuropneumoniae , *MEMBRANE proteins , *HYDROPHOBIC interactions , *CHLORAMPHENICOL , *SITE-specific mutagenesis , *DRUG resistance in bacteria , *TRIMETHOPRIM , *THERAPEUTICS - Abstract
Objectives: To characterize ICEApl2, an SXT-related integrative and conjugative element (ICE) found in a clinical isolate of the porcine pathogen Actinobacillus pleuropneumoniae, and analyse the functional nature of the encoded FloR.Methods: ICEApl2 was identified in the genome of A. pleuropneumoniae MIDG3553. Functional analysis was done using conjugal transfer experiments. MIDG3553 was tested for susceptibility to the antimicrobials for which resistance genes are present in ICEApl2. Lack of florfenicol/chloramphenicol resistance conferred by the encoded FloR protein was investigated by cloning and site-directed mutagenesis experiments in Escherichia coli.Results: ICEApl2 is 92660 bp and contains 89 genes. Comparative sequence analysis indicated that ICEApl2 is a member of the SXT/R391 ICE family. Conjugation experiments showed that, although ICEApl2 is capable of excision from the chromosome, it is not self-transmissible. ICEApl2 encodes the antimicrobial resistance genes floR, strAB, sul2 and dfrA1, and MIDG3553 is resistant to streptomycin, sulfisoxazole and trimethoprim, but not florfenicol or chloramphenicol. Cloning and site-directed mutagenesis of the floR gene revealed the importance of the nature of the hydrophobic amino acid residues at positions 160 and 228 in FloR for determining resistance to florfenicol and chloramphenicol.Conclusions: Our results indicate that the nature of hydrophobic residues at positions 160 and 228 of FloR contribute dynamically to specific efflux of florfenicol and chloramphenicol, although some differences in resistance levels may depend on the bacterial host species. This is also, to our knowledge, the first description of an SXT/R391 ICE in A. pleuropneumoniae or any member of the Pasteurellaceae. [ABSTRACT FROM AUTHOR]- Published
- 2018
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9. Proposal of Actinobacillus pleuropneumoniae serovar 19, and reformulation of previous multiplex PCRs for capsule-specific typing of all known serovars.
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Stringer, Oliver W., Bossé, Janine T., Lacouture, Sonia, Gottschalk, Marcelo, Fodor, László, Angen, Øystein, Velazquez, Eduardo, Penny, Paul, Lei, Liancheng, Langford, Paul R., and Li, Yanwen
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ACTINOBACILLUS pleuropneumoniae , *GENES , *POLYMERASE chain reaction , *GENOTYPES - Abstract
[Display omitted] • Identification of A. pleuropneumoniae serovar 19 type II capsule locus. • Serovar 19 isolates are biovar 1, encode ApxII and ApxIV toxins, and have either a serogroup 3/6/8/15 or 4/7 O-Ag locus. • Reformulation of two mPCRs for unequivocal capsule typing of all known A. pleuropneumoniae serovars. Two serologically and molecularly non-typeable isolates of the porcine lung pathogen Actinobacillus pleuropneumoniae have been identified from diseased swine in two different continents. Genome sequencing was carried out to identify their diagnostically relevant genotypes. Both isolates are biovar 1 and encode genes for production of ApxIV and ApxII (apxIICA structural genes, and apxIBD export genes). They both possess the same novel type II capsule locus (most similar to serovar 1, but with two capsule genes not previously found in A. pleuropneumoniae) but differ in their O-Ag loci. Strain 7213384-1 from Denmark, which we propose as the reference strain for serovar 19, has a serogroup 3/6/8/15 O-Ag locus; the Canadian isolate A08-013 has a serogroup 4/7 O-Ag locus. We have expanded the second of our two previously described A. pleuropneumoniae mPCRs to include capsule gene-specific primers for definitive detection of serovars 13–14 and 16–19. [ABSTRACT FROM AUTHOR]
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- 2021
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