1. Identification and Application of Gene Expression Signatures Associated with Lifespan Extension.
- Author
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Tyshkovskiy A, Bozaykut P, Borodinova AA, Gerashchenko MV, Ables GP, Garratt M, Khaitovich P, Clish CB, Miller RA, and Gladyshev VN
- Subjects
- Aging drug effects, Animals, Ascorbic Acid analogs & derivatives, Ascorbic Acid pharmacology, Caloric Restriction, Female, Gene Expression Regulation drug effects, Gene Knockout Techniques, Hypoxia genetics, Kelch-Like ECH-Associated Protein 1 genetics, Life Expectancy, Liver metabolism, Longevity drug effects, Male, Mice, Mice, Inbred BALB C, Mice, Inbred C3H, Mice, Inbred C57BL, Morpholines pharmacology, Pyrimidines pharmacology, Sirolimus pharmacology, Aging genetics, Longevity genetics, Transcriptome
- Abstract
Several pharmacological, dietary, and genetic interventions that increase mammalian lifespan are known, but general principles of lifespan extension remain unclear. Here, we performed RNA sequencing (RNA-seq) analyses of mice subjected to 8 longevity interventions. We discovered a feminizing effect associated with growth hormone regulation and diminution of sex-related differences. Expanding this analysis to 17 interventions with public data, we observed that many interventions induced similar gene expression changes. We identified hepatic gene signatures associated with lifespan extension across interventions, including upregulation of oxidative phosphorylation and drug metabolism, and showed that perturbed pathways may be shared across tissues. We further applied the discovered longevity signatures to identify new lifespan-extending candidates, such as chronic hypoxia, KU-0063794, and ascorbyl-palmitate. Finally, we developed GENtervention, an app that visualizes associations between gene expression changes and longevity. Overall, this study describes general and specific transcriptomic programs of lifespan extension in mice and provides tools to discover new interventions., (Copyright © 2019 Elsevier Inc. All rights reserved.)
- Published
- 2019
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