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Symbiotic nitrogen (N) fixation has been shown to support carbon storage in young regenerating tropical forests, but N-fixing trees can also be strong competitors with non-fixing trees, making it unclear which mechanism drives long term patterns in biomass accretion. Many tropical forests have excess N, but factors such as rising atmospheric CO2 or selective cutting practices might induce additional N demand. Here we combine decades of stem inventory data, in-situ measures of symbiotic N fixation, and simulations of N demand to evaluate demographic and biogeochemical controls on biomass dynamics in legume-rich lowland forests of Trinidad. We document sustained net biomass accumulation and high rates of N fixation in these forests, regardless of the timing of selective timber harvests, including an old growth stand. The biomass accumulation was explained by growth of non-fixing trees, not N-fixing trees, but the total amount of symbiotic N fixation was sufficient to account for most of net above ground N demands, suggesting that N-fixers could contribute to the long-term C sink in these forests via fertilizing non-fixers.

The response of arctic ecosystems to global change will be critical for future climate, due to their vast stores of carbon. Climate warming appears to be linked to the expansion of shrubs across tundra, but it is unclear how shrubs affect the activity of soil microbes. We investigated three potential mechanisms by which shrubs may stimulate soil microbial activity, by 1) increasing the rate of litter inputs, 2) promoting soil microbial adaptation to litter and 3) reducing nutrient limitation. We created microcosms of root-free soils collected from shrub (Alnus fruticosa, Betula nana, and Salix pulchra) and non-shrub plots in arctic Alaska and conducted two experiments. We quantified heterotrophic soil respiration rates in response to litter inputs (experiment 1), or nutrient inputs (nitrogen, phosphorus, or both nutrients together, experiment 2). We found that shrub-conditioned soils maintained higher rates of soil respiration in both experiments. Shrub litter increased respiration in both soil types, but the relative response was greater in non-shrub soils. We found no evidence that shrubs reduce nutrient limitation to heterotrophic respiration, although we observed a short-term increase in respiration after phosphorus addition in both soil types. Collectively, our results suggest that higher rates of respiration in shrub-conditioned soils may be the result of higher litter input rates, but other factors such as organic matter quality or microbial community structure may also contribute to our observed differences in respiration.

Longleaf pine savannas house a diverse community of herbaceous N2-fixing legume species that have the potential to replenish nitrogen (N) losses from fire. Whether legumes fill this role depends on the factors that regulate symbiotic fixation, including soil nutrients such as phosphorus (P) and molybdenum (Mo) and the growth and fixation strategies of different species. In greenhouse experiments, we determined how these factors influence fixation for seven species of legumes grown in pure field soil from two different regions of the southeastern US longleaf pine ecosystem. We first added P and Mo individually and in combination, and found that P alone constrained fixation. Phosphorus primarily influenced fixation by regulating legume growth. Second, we added N to plants and found that species either downregulated fixation (facultative strategy) or maintained fixation at a constant rate (obligate strategy). Species varied nearly fourfold in fixation rate, reflecting differences in growth rate, taxonomy and fixation strategy. However, fixation responded strongly to P addition across all species in our study, suggesting that the P cycle regulates N inputs by herbaceous legumes.

Most land plants acquire nitrogen (N) through associations with arbuscular (AM) and ectomycorrhizal (ECM) fungi, but these symbionts employ contrasting strategies for N acquisition, which may lead to different stocks of soil carbon (C). We experimentally test this hypothesis with a mesocosm system where AM and ECM tree seedling roots, or their hyphae only, could access mineral soils with 13 C- and 15 N-enriched organic matter. We quantified loss of soil C and N, plant uptake of N and new inputs of plant C to soil. We found that AM, but not ECM, seedlings reduced soil C relative to controls. Soil C loss was greater in the presence of roots relative to hyphae only for both AM and ECM seedlings, but was correlated with plant N uptake for AM seedlings only. While new plant C inputs stimulated soil C loss in both symbioses, we detected plant C inputs more frequently and measured higher rates of decomposer activity in soils colonized by AM relative to ECM seedlings. Our study experimentally demonstrates how mycorrhizal strategies for N can affect soil C and C:N, even at the scale of an individual plant. Such effects may contribute to broad patterns in soil C across terrestrial ecosystems.

Summary Climate change is increasing drought frequency, which may affect symbiotic N2 fixation (SNF), a process that facilitates ecosystem recovery from disturbance. Here, we assessed the effect of drought frequency on the ecophysiology and SNF rate of a common N2-fixing tree in eastern US forests. We grew Robinia pseudoacacia seedlings under the same mean soil moisture, but with different drought frequency caused by wet–dry cycles of varying periodicity. We found no effect of drought frequency on final biomass or mean SNF rate. However, seedlings responded differently to wet and dry phases depending on drought frequency. Under low-frequency droughts, plants fixed carbon (C) and nitrogen (N) at similar rates during wet and dry phases. Conversely, under high-frequency droughts, plants fixed C and N at low rates during dry phases and at high rates during wet phases. Our findings suggest that R. pseudoacacia growth is resistant to increased drought frequency because it employs two strategies – drought tolerance or drought avoidance, followed by compensation. SNF may play a role in both by supplying N to leaf tissues for acclimation and by facilitating compensatory growth following drought. Our findings point to SNF as a mechanism for plants and ecosystems to cope with drought.

Increased drought intensity and frequency due to climate change may reduce the abundance and activity of nitrogen (N2 )-fixing plants, which supply new N to terrestrial ecosystems. As a result, drought may indirectly reduce ecosystem productivity through its effect on the N cycle. Here, we manipulated growing season net rainfall across a series of plots in an early successional mesic deciduous forest to understand how drought affects the aboveground productivity of the N2 -fixing tree Robinia pseudoacacia and three co-occurring nonfixing tree species. We found that lower soil moisture was associated with reduced productivity of R. pseudoacacia but not of nonfixing trees. As a result, the relative biomass and density of R. pseudoacacia declined in drier soils over time. Greater aboveground biomass of R. pseudoacacia was also associated with greater total soil N, extractable inorganic N, N mineralization rates, and productivity of nonfixing trees. These soil N effects may reflect current N2 fixation by R. pseudoacacia saplings, or the legacy effect of former trees in the same location. Our results suggest that R. pseudoacacia promotes the growth of nonfixing trees in early succession through its effect on the N cycle. However, the sensitivity of R. pseudoacacia to dry soils may reduce N2 fixation under scenarios of increasing drought intensity and frequency, demonstrating a mechanism by which drought may indirectly diminish potential forest productivity and recovery rate from disturbance.

Questions remain as to which soil nutrients limit primary production in tropical forests. Phosphorus (P) has long been considered the primary limiting element in lowland forests, but recent evidence demonstrates substantial heterogeneity in response to nutrient addition, highlighting a need to understand and diagnose nutrient limitation across diverse forests. Fine-root characteristics including their abundance, functional traits, and mycorrhizal symbionts can be highly responsive to changes in soil nutrients and may help to diagnose nutrient limitation. Here, we document the response of fine roots to long-term nitrogen (N), P, and potassium (K) fertilization in a lowland forest in Panama. Because this experiment has demonstrated that N and K together limit tree growth and P limits fine litter production, we hypothesized that fine roots would also respond to nutrient addition. Specifically we hypothesized that N, P, and K addition would reduce the biomass, diameter, tissue density, and mycorrhizal colonization of fine roots, and increase nutrient concentration in root tissue. Most morphological root traits responded to the single addition of K and the paired addition of N and P, with the greatest response to all three nutrients combined. The addition of N, P, and K together reduced fine-root biomass, length, and tissue density, and increased specific root length, whereas root diameter remained unchanged. Nitrogen addition did not alter root N concentration, but P and K addition increased root P and K concentration, respectively. Mycorrhizal colonization of fine roots declined with N, increased with P, and was unresponsive to K addition. Although plant species composition remains unchanged after 14 years of fertilization, fine-root characteristics responded to N, P, and K addition, providing some of the strongest stand-level responses in this experiment. Multiple soil nutrients regulate fine-root abundance, morphological and chemical traits, and their association with mycorrhizal fungi in a species-rich lowland tropical forest.

Summary Symbiotic di-nitrogen (N2) fixation is a critical biogeochemical process in tropical forests, yet it remains unresolved how fixation is controlled by the availability of soil nitrogen and phosphorus, two nutrients often considered limiting in terrestrial ecosystems. We examine whether individual N2-fixing trees can overcome nitrogen and phosphorus constraints by employing different strategies of nutrient acquisition and use: N2 fixation, phosphatase exudation, mycorrhizal symbiosis and changes in root–shoot ratio or tissue stoichiometry. We grew a common and widespread N2 fixer, Inga punctata, in a full factorial nitrogen and phosphorus addition experiment (each nutrient at three levels) and evaluated whether trees adjusted their strategies of nutrient acquisition to overcome limitation. N2 fixation was controlled by nitrogen availability in phosphorus-sufficient soils, but both fixation and plant growth were constrained by phosphorus in the unamended native phosphorus-poor soils. Despite the investment in both extracellular phosphatases and mycorrhizal symbionts, plants were unable to overcome phosphorus limitation. Our findings support the hypotheses that: (i) N2 fixation is proximately controlled by nitrogen availability, consistent with a facultative fixation strategy, and (ii) N2 fixation and N2 fixer biomass growth are ultimately constrained by soil phosphorus. We found no support for the hypothesis that fixers can overcome phosphorus limitation by trading fixed N2 for soil phosphorus. Synthesis. This study provides new knowledge about how nitrogen and phosphorus interact to regulate tropical N2 fixation by examining a suite of strategies that plants may employ to overcome nutrient limitation. These findings, focused at the organismal level, have broader implications for biogeochemical controls at the ecosystem level in tropical forests.

Biological nitrogen fixation limits plant growth and carbon exchange at local to global scales. Long-term nutrient manipulation experiments in forests and short-term manipulation experiments in microcosms suggest that the micronutrient molybdenum, a component of the nitrogen-fixing enzyme nitrogenase, limits nitrogen fixation by asymbiotic bacteria in tropical soils in Panama. Nitrogen fixation, the biological conversion of di-nitrogen to plant-available ammonium, is the primary natural input of nitrogen to ecosystems1, and influences plant growth and carbon exchange at local to global scales2,3,4,5,6. The role of this process in tropical forests is of particular concern, as these ecosystems harbour abundant nitrogen-fixing organisms1,4 and represent one third of terrestrial primary production4,7,8. Here we show that the micronutrient molybdenum, a cofactor in the nitrogen-fixing enzyme nitrogenase, limits nitrogen fixation by free-living heterotrophic bacteria in soils of lowland Panamanian forests. We measured the fixation response to long-term nutrient manipulations in intact forests, and to short-term manipulations in soil microcosms. Nitrogen fixation increased sharply in treatments of molybdenum alone, in micronutrient treatments that included molybdenum by design and in treatments with commercial phosphorus fertilizer, in which molybdenum was a ‘hidden’ contaminant. Fixation did not respond to additions of phosphorus that were not contaminated by molybdenum. Our findings show that molybdenum alone can limit asymbiotic nitrogen fixation in tropical forests and raise new questions about the role of molybdenum and phosphorus in the tropical nitrogen cycle. We suggest that molybdenum limitation may be common in highly weathered acidic soils, and may constrain the ability of some forests to acquire new nitrogen in response to CO2 fertilization9.

The recent infestation of southern Appalachian eastern hemlock stands by hemlock woolly adelgid (HWA) is expected to have dramatic and lasting effects on forest structure and function. We studied the short-term changes to the carbon cycle in a mixed stand of hemlock and hardwoods, where hemlock was declining due to either girdling or HWA infestation. We expected that hemlock would decline more rapidly from girdling than from HWA infestation. Unexpectedly, in response to both girdling and HWA infestation, hemlock basal area increment (BAI) reduced substantially compared to reference hardwoods in 3 years. This decline was concurrent with moderate increases in the BAI of co-occurring hardwoods. Although the girdling treatment resulted in an initial pulse of hemlock needle inputs, cumulative litter inputs and O horizon mass did not differ between treatments over the study period. Following girdling and HWA infestation, very fine root biomass declined by 20–40% in 2 years, which suggests hemlock root mortality in the girdling treatment, and a reduction in hemlock root production in the HWA treatment. Soil CO2 efflux (Esoil) declined by approximately 20% in 1 year after both girdling and HWA infestation, even after accounting for the intra-annual variability of soil temperature and moisture. The reduction in Esoil and the concurrent declines in BAI and standing very fine root biomass suggest rapid declines in hemlock productivity from HWA infestation. The accelerated inputs of detritus resulting from hemlock mortality are likely to influence carbon and nutrient fluxes, and dictate future patterns of species regeneration in these forest ecosystems.

Summary Rhododendron maximum L., a spreading understory shrub, inhibits overstory regeneration and alters forest community structure in southern Appalachian hardwood forests. Using paired plots and reciprocal litter transplants in forests with and without R. maximum cover, we examined the influence of R. maximum on litter mass and quality, N cycling and soil extracellular enzymes. Standing stocks of soil organic matter, soil N, leaf litter mass and fine root biomass were greater in forests with R. maximum than those without. Tannin extracts from R. maximum foliage, and leaf litter and fine roots collected under R. maximum had a relatively high capacity to precipitate protein compared to extracts from trees. Across the growing season, soil inorganic N availability was generally lower under R. maximum , mostly due to reduced NO 3 − availability. Our data suggest that R. maximum litter alters N cycling through the formation of recalcitrant polyphenol–organic N complexes. Soil extracellular enzymes indicate the potential processing rates of organic substrates. Between forest types, polyphenol oxidase activity was greatest in R. maximum O horizons, regardless of litter type, suggesting that the local microbial community can better degrade and access protein–tannin-complexed N. Protease activity did not differ between forest types, but was greater on R. maximum leaf litter than hardwood leaf litter. The alteration of the N cycle via the formation of polyphenol–organic N complexes may contribute to hardwood seedling suppression, while the enzymatic release of these complexes by ericoid mycorrhizal fungi may increase N acquisition for R. maximum and contribute to its expansion in southern Appalachian forests.

Biological di-nitrogen fixation (N(2)) is the dominant natural source of new nitrogen to land ecosystems. Phosphorus (P) is thought to limit N(2) fixation in many tropical soils, yet both molybdenum (Mo) and P are crucial for the nitrogenase reaction (which catalyzes N(2) conversion to ammonia) and cell growth. We have limited understanding of how and when fixation is constrained by these nutrients in nature. Here we show in tropical forests of lowland Panama that the limiting element on asymbiotic N(2) fixation shifts along a broad landscape gradient in soil P, where Mo limits fixation in P-rich soils while Mo and P co-limit in P-poor soils. In no circumstance did P alone limit fixation. We provide and experimentally test a mechanism that explains how Mo and P can interact to constrain asymbiotic N(2) fixation. Fixation is uniformly favored in surface organic soil horizons--a niche characterized by exceedingly low levels of available Mo relative to P. We show that soil organic matter acts to reduce molybdate over phosphate bioavailability, which, in turn, promotes Mo limitation in sites where P is sufficient. Our findings show that asymbiotic N(2) fixation is constrained by the relative availability and dynamics of Mo and P in soils. This conceptual framework can explain shifts in limitation status across broad landscape gradients in soil fertility and implies that fixation depends on Mo and P in ways that are more complex than previously thought.

Plants can acquire carbon from sources other than atmospheric carbon dioxide (CO(2)), including soil-dissolved inorganic carbon (DIC). Although the net flux of CO(2) is out of the root, soil DIC can be taken up by the root, transported within the plant, and fixed either photosynthetically or anaplerotically by plant tissues. We tested the ability of Pinus taeda L. seedlings exposed to (13)C-labeled soil DIC and two NH(4)(+) availability regimes to take up and fix soil DIC. We also measured the concentration and distribution of the fixed soil DIC within the plant and mycorrhizal tissues, and quantified the contribution of soil DIC to whole-plant carbon (C) gain. Seedlings exposed to labeled DIC were significantly enriched in (13)C compared with seedlings exposed to unlabeled DIC (6.7 versus -31.7 per thousand). Fixed soil DIC was almost evenly distributed between above- and belowground biomass (55 and 45%, respectively), but was unevenly distributed among tissues. Aboveground, stem tissue contained 65% of the fixed soil DIC but represented only 27% of the aboveground biomass, suggesting either corticular photosynthesis or preferential stem allocation. Belowground, soil DIC had the greatest effect (measured as (13)C enrichment) on the C pool of rapidly growing nonmycorrhizal roots. Soil DIC contributed approximately 0.8% to whole-plant C gain, and approximately 1.6% to belowground C gain. We observed a slight but nonsignificant increase in both relative C gain and the contribution of soil DIC to C gain in NH(4)(+)-fertilized seedlings. Increased NH(4)(+) availability significantly altered the distribution of fixed soil DIC among tissue types and increased the amount of fixed soil DIC in ectomycorrhizal roots by 130% compared with unfertilized seedlings. Increased NH(4)(+) availability did not increase fixation of soil DIC in nonmycorrhizal roots, suggesting that NH(4)(+) assimilation may be concentrated in ectomycorrhizal fungal tissues, reflecting greater anaplerotic demands. Soil DIC is likely to contribute only a small amount of C to forest trees, but it may be important in C fixation processes of specific tissues, such as newly formed stems and fine roots, and ectomycorrhizal roots assimilating NH(4)(+).