15 results on '"Clark, Ronald"'
Search Results
2. On the Mechanism of Copper(I)-Catalyzed Azide-Alkyne Cycloaddition.
- Author
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Zhu L, Brassard CJ, Zhang X, Guha PM, and Clark RJ
- Subjects
- Catalysis, Coordination Complexes chemistry, Cycloaddition Reaction, Kinetics, Alkynes chemistry, Azides chemistry, Copper chemistry
- Abstract
The copper(I)-catalyzed azide-alkyne cycloaddition (CuAAC) reaction regiospecifically produces 1,4-disubstituted-1,2,3-triazole molecules. This heterocycle formation chemistry has high tolerance to reaction conditions and substrate structures. Therefore, it has been practiced not only within, but also far beyond the area of heterocyclic chemistry. Herein, the mechanistic understanding of CuAAC is summarized, with a particular emphasis on the significance of copper/azide interactions. Our analysis concludes that the formation of the azide/copper(I) acetylide complex in the early stage of the reaction dictates the reaction rate. The subsequent triazole ring-formation step is fast and consequently possibly kinetically invisible. Therefore, structures of substrates and copper catalysts, as well as other reaction variables that are conducive to the formation of the copper/alkyne/azide ternary complex predisposed for cycloaddition would result in highly efficient CuAAC reactions. Specifically, terminal alkynes with relatively low pKa values and an inclination to engage in π-backbonding with copper(I), azides with ancillary copper-binding ligands (aka chelating azides), and copper catalysts that resist aggregation, balance redox activity with Lewis acidity, and allow for dinuclear cooperative catalysis are favored in CuAAC reactions. Brief discussions on the mechanistic aspects of internal alkyne-involved CuAAC reactions are also included, based on the relatively limited data that are available at this point., (© 2016 The Chemical Society of Japan & Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.)
- Published
- 2016
- Full Text
- View/download PDF
3. Strain-promoted azide-alkyne cycloadditions of benzocyclononynes.
- Author
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Tummatorn J, Batsomboon P, Clark RJ, Alabugin IV, and Dudley GB
- Subjects
- Cyclization, Models, Molecular, Molecular Structure, Stereoisomerism, Alkynes chemistry, Azides chemistry, Cycloparaffins chemistry
- Abstract
Preliminary studies related to the design and development of new cycloalkyne reagents for metal-free click coupling are reported. Cyclononynes are more stable than cyclooctynes, and the robust benzocyclononyne platform offers spontaneous reactivity toward azides at rates competitive with other azidophiles that have been employed for metal-free click coupling. Benzocyclononynes (e.g., 1) provide valuable insight into the design of new cycloalkynes for strain-promoted azide-alkyne cycloaddition (SPAAC) couplings for applications in which side reactions and decomposition of the reagent must be kept to a minimum.
- Published
- 2012
- Full Text
- View/download PDF
4. Experimental investigation on the mechanism of chelation-assisted, copper(II) acetate-accelerated azide-alkyne cycloaddition.
- Author
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Kuang GC, Guha PM, Brotherton WS, Simmons JT, Stankee LA, Nguyen BT, Clark RJ, and Zhu L
- Subjects
- Cyclization, Kinetics, Magnetic Resonance Spectroscopy, Models, Molecular, Solvents, Acetates chemistry, Alkynes chemistry, Azides chemistry, Chelating Agents chemistry, Copper chemistry
- Abstract
A mechanistic model is formulated to account for the high reactivity of chelating azides (organic azides capable of chelation-assisted metal coordination at the alkylated azido nitrogen position) and copper(II) acetate (Cu(OAc)(2)) in copper(II)-mediated azide-alkyne cycloaddition (AAC) reactions. Fluorescence and (1)H NMR assays are developed for monitoring the reaction progress in two different solvents, methanol and acetonitrile. Solvent kinetic isotopic effect and premixing experiments give credence to the proposed different induction reactions for converting copper(II) to catalytic copper(I) species in methanol (methanol oxidation) and acetonitrile (alkyne oxidative homocoupling), respectively. The kinetic orders of individual components in a chelation-assisted, copper(II)-accelerated AAC reaction are determined in both methanol and acetonitrile. Key conclusions resulting from the kinetic studies include (1) the interaction between copper ion (either in +1 or +2 oxidation state) and a chelating azide occurs in a fast, pre-equilibrium step prior to the formation of the in-cycle copper(I)-acetylide, (2) alkyne deprotonation is involved in several kinetically significant steps, and (3) consistent with prior experimental and computational results by other groups, two copper centers are involved in the catalysis. The X-ray crystal structures of chelating azides with Cu(OAc)(2) suggest a mechanistic synergy between alkyne oxidative homocoupling and copper(II)-accelerated AAC reactions, in which both a bimetallic catalytic pathway and a base are involved. The different roles of the two copper centers (a Lewis acid to enhance the electrophilicity of the azido group and a two-electron reducing agent in oxidative metallacycle formation, respectively) in the proposed catalytic cycle suggest that a mixed valency (+2 and +1) dinuclear copper species be a highly efficient catalyst. This proposition is supported by the higher activity of the partially reduced Cu(OAc)(2) in mediating a 2-picolylazide-involved AAC reaction than the fully reduced Cu(OAc)(2). Finally, the discontinuous kinetic behavior that has been observed by us and others in copper(I/II)-mediated AAC reactions is explained by the likely catalyst disintegration during the course of a relatively slow reaction. Complementing the prior mechanistic conclusions drawn by other investigators, which primarily focus on the copper(I)/alkyne interactions, we emphasize the kinetic significance of copper(I/II)/azide interaction. This work not only provides a mechanism accounting for the fast Cu(OAc)(2)-mediated AAC reactions involving chelating azides, which has apparent practical implications, but suggests the significance of mixed-valency dinuclear copper species in catalytic reactions where two copper centers carry different functions.
- Published
- 2011
- Full Text
- View/download PDF
5. Chelation-assisted, copper(II)-acetate-accelerated azide-alkyne cycloaddition.
- Author
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Kuang GC, Michaels HA, Simmons JT, Clark RJ, and Zhu L
- Subjects
- Chelating Agents chemistry, Cyclization, Molecular Structure, Organometallic Compounds chemistry, Stereoisomerism, Acetates chemistry, Alkynes chemistry, Azides chemistry, Chelating Agents chemical synthesis, Copper chemistry, Organometallic Compounds chemical synthesis
- Abstract
We described in a previous communication a variant of the popular Cu(I)-catalyzed azide-alkyne cycloaddition (AAC) process where 5 mol % of Cu(OAc)(2) in the absence of any added reducing agent is sufficient to enable the reaction. 2-Picolylazide (1) and 2-azidomethylquinoline (2) were found to be by far the most reactive carbon azide substrates that convert to 1,2,3-triazoles in as short as a few minutes under the discovered conditions. We hypothesized that the abilities of 1 and 2 to chelate Cu(II) contribute significantly to the observed high reaction rates. The current work examines the effect of auxiliary ligands near the azido group other than pyridyl for Cu(II) on the efficiency of the Cu(OAc)(2)-accelerated AAC reaction. The carbon azides capable of binding to the catalytic copper center at the alkylated azido nitrogen in a chelatable fashion were indeed shown to be superior substrates under the reported conditions. The chelation between carbon azide 11 and Cu(II) was demonstrated in an X-ray single-crystal structure. In a limited set of examples, the ligand tris(benzyltriazolylmethyl)amine (TBTA), developed by Fokin et al. for assisting the original Cu(I)-catalyzed AAC reactions, also dramatically enhances the Cu(OAc)(2)-accelerated AAC reactions involving nonchelating azides. This observation leads to the hypothesis of an additional effect of chelating azides on the efficiencies of Cu(OAc)(2)-accelerated AAC reactions, which is to facilitate the rapid reduction of Cu(II) to highly catalytic Cu(I) species. Mechanistic studies on the AAC reactions with particular emphasis on the role of carbon azide/copper interactions will be conducted based on the observations reported in this work. Finally, the immediate utility of the product 1,2,3-triazole molecules derived from chelating azides as multidentate metal coordination ligands is demonstrated. The resulting triazolyl-containing ligands are expected to bind with transition metal ions via the N(2) nitrogen of the 1,2,3-triazolyl group to form nonplanar coordination rings. The Cu(II) complexes of bidentate T1 and tetradentate T6 and the Zn(II) complex of T6 were characterized by X-ray crystallography. The structure of [Cu(T1)(2)(H(2)O)(2)](ClO(4))(2) reveals the interesting synergistic effect of hydrogen bonding, π-π stacking interactions, and metal coordination in forming a one-dimensional supramolecular construct in the solid state. The tetradentate coordination mode of T6 may be incorporated into designs of new molecule sensors and organometallic catalysts.
- Published
- 2010
- Full Text
- View/download PDF
6. A striking exception to the chelate model for acyclic diastereocontrol: efficient access to a versatile propargyl alcohol for chemical synthesis.
- Author
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Tlais SF, Clark RJ, and Dudley GB
- Subjects
- Magnetic Resonance Spectroscopy, Spectrometry, Mass, Electrospray Ionization, Stereoisomerism, Alkynes chemistry, Chelating Agents chemistry, Models, Molecular, Propanols chemistry
- Abstract
The four-step, asymmetric synthesis of a chiral propargyl alcohol 1 from (R)-pantolactone is described. A key feature of the synthesis is a diastereoselective acetylide addition to a chiral alpha-alkoxy-aldehyde 7, in which unusual Felkin selectivity is observed, despite the potential for chelation control. Crystalline propargyl alcohol 1 is valuable for complex molecule synthesis, and is easy to prepare in multi-gram quantities and high diastereomeric purity.
- Published
- 2009
- Full Text
- View/download PDF
7. Apparent copper(II)-accelerated azide-alkyne cycloaddition.
- Author
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Brotherton WS, Michaels HA, Simmons JT, Clark RJ, Dalal NS, and Zhu L
- Subjects
- Catalysis, Combinatorial Chemistry Techniques, Cyclization, Molecular Structure, Oxidation-Reduction, Propanols chemistry, Triazoles chemistry, Alkynes chemistry, Azides chemistry, Copper chemistry, Triazoles chemical synthesis
- Abstract
Cu(II) salts accelerate azide-alkyne cycloaddition reactions in alcoholic solvents without reductants such as sodium ascorbate. Spectroscopic observations suggest that Cu(II) undergoes reduction to catalytic Cu(I) species via either alcohol oxidation or alkyne homocoupling, or both, during an induction period. The reactions involving 2-picolylazide are likely facilitated by its chelation to Cu(II). The highly exothermic reaction between 2-picolylazide and propargyl alcohol completes within 1-2 min in the presence of as low as 1 mol % Cu(OAc)(2).
- Published
- 2009
- Full Text
- View/download PDF
8. Radical cascade transformations of tris(o-aryleneethynylenes) into substituted benzo[a]indeno[2,1-c]fluorenes.
- Author
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Alabugin IV, Gilmore K, Patil S, Manoharan M, Kovalenko SV, Clark RJ, and Ghiviriga I
- Subjects
- Algorithms, Catalysis, Cyclization, Magnetic Resonance Spectroscopy, Models, Chemical, Stereoisomerism, Thermodynamics, Alkynes chemistry, Benzene Derivatives chemistry, Chemistry, Organic methods, Ethers chemistry, Fluorenes chemical synthesis, Free Radicals chemistry, Indenes chemistry
- Abstract
Oligomeric o-aryleneethynylenes with three triple bonds undergo cascade radical transformations in reaction with a Bu 3SnH/AIBN system. These cascades involve three consecutive cycle closures with the formation of substituted benzo[ a]indeno[2,1- c]fluorene or benzo[1,2]fluoreno[4,3- b]silole derivatives. The success of this sequence depends on regioselectivity of the initial attack of the Bu 3Sn radical at the central triple bond of the o-aryleneethynylene moiety. The cascade is propagated through the sequence of 5-exo-dig and 6-exo-dig cyclizations which is followed by either a radical attack at the terminal Ar substituent or radical transposition which involves H-abstraction from the terminal TMS group and 5-endo-trig cyclization. Overall, the transformation has potential to be developed into an approach to a new type of graphite ribbons.
- Published
- 2008
- Full Text
- View/download PDF
9. Synthesis of 5-Iodo-1,4-disubstituted-1,2,3-triazoles Mediated by in Situ Generated Copper (I) Catalyst and Electrophilic Triiodide Ion.
- Author
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Brotherton, Wendy S., Clark, Ronald J., and Lei Zhu
- Subjects
- *
COPPER , *SODIUM iodide , *AZIDES , *RING formation (Chemistry) , *ALKYNES - Abstract
Mixing copper (II) perchlorate and sodium iodide solutions results in copper (I) species and the electrophilic triiodide ions, which collectively mediate the cycloaddition reaction of organic azide and terminal alkyne to afford 5-iodo-1,4-disubstituted-1,2,3-triazoles. One molar equivalent of an amine additive is required for achieving a full conversion. Excessive addition of the amine compromises the selectivity for 5-iodo-1,2,3-triazole by promoting the formation of 5-proto-1,2,3-triazole. Based on preliminary kinetic and structural evidence, a mechanistic model is formulated in which a 5-iodo-1,2,3-triazole is formed via iodination of a copper (I) triazolide intermediate by the electrophilic triiodide ions (and possibly triethyliodoammonium ions). The experimental evidence explains the higher reactivity of the in situ generated copper (I) species and triiodide ion in the formation of 5-iodo-1,2,3-triazoles than that of the pure forms of copper (I) iodide and iodine. [ABSTRACT FROM AUTHOR]
- Published
- 2012
- Full Text
- View/download PDF
10. Tridentate complexes of 2,6-bis(4-substituted-1,2,3-triazol-1-ylmethyl)pyridine and its organic azide precursors: an application of the copper(ii) acetate-accelerated azide–alkyne cycloadditionElectronic supplementary information (ESI) available. Powder diffraction pattern of Cu(OAc)2·H2O used in this work. CCDC reference numbers 762781, 762783, 811002–811010. For ESI and crystallographic data in CIF or other electronic format see DOI: 10.1039/c0dt01702g
- Author
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Brotherton, Wendy S., Guha, Pampa M., Phan, Hoa, Clark, Ronald J., Shatruk, Michael, and Zhu, Lei
- Subjects
ORGANIC synthesis ,PYRIDINE ,ALKYNES ,AZIDES ,COPPER ,WATER ,RING formation (Chemistry) - Abstract
Rapid coupling reactions between 2,6-bis(azidomethyl)pyridine and terminal alkynes in the presence of 5 mol% Cu(OAc)2·H2O without the addition of a reducing agent afford tridentate ligands for first-row transition-metal ions. The chelation between CuIIand alkylated nitrogen atoms of the azido groups of 2,6-bis(azidomethyl)pyridine, as observed in the solid state, is credited for the acceleration of the azide–alkyne cycloaddition reactions. [ABSTRACT FROM AUTHOR]
- Published
- 2011
- Full Text
- View/download PDF
11. Convenient Ambient Temperature Generation of Sulfonyl Radicals.
- Author
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Gilmore, Kerry, Cold, Brian, Clark, Ronald J., and Alabugin, Igor V.
- Subjects
- *
ORGANIC chemistry , *HYDROCARBONS , *OXIDATION , *ALKYNES , *CATALYSTS - Abstract
Presented herein is a novel method for the efficient, ambient temperature generation of sulfonyl radicals from aryl and alkyl sulfonylbromides upon autoxidation of triethylborane (Et[sub 3]B). The resultant radicals were regioselectively trapped via addition to terminal alkynes, generating a secondary vinyl radical that selectively abstracts a Br atom from RSO[sub 2]Br, yielding the (E)-bromo vinylsulfones. Sensitivity towards Lewis basic groups was observed, presumably due to the disruptive coordination to Et[sub 3]B before atom-transfer. [ABSTRACT FROM AUTHOR]
- Published
- 2013
- Full Text
- View/download PDF
12. Chemoselective Sequential âClickâ Ligation Using Unsymmetrical Bisazides.
- Author
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Yuan, Zhao, Kuang, Gui-Chao, Clark, Ronald J., and Zhu, Lei
- Subjects
- *
AZIDES , *COPPER catalysts , *LIGATION reactions , *CHELATING agents , *ALKYNES , *REACTIVITY (Chemistry) , *REGIOSELECTIVITY (Chemistry) - Abstract
Unsymmetrical bisazides containing chelating and nonchelating azido groups undergo chemoselective three-component copper(I)-catalyzed azideâalkyne conjugation reactions with two different alkyne molecules. In conjunction with the reactivity gap between aromatic and aliphatic alkynes, a bistriazole molecule can be generated with excellent regioselectivity by mixing two alkynes and a bisazide in a single reaction container. This method is applicable in aqueous solutions at neutral pH, which may lend utilities in bioconjugation applications. [ABSTRACT FROM AUTHOR]
- Published
- 2012
- Full Text
- View/download PDF
13. Structurally Diverse Copper(II) Complexes of Polyaza Ligands Containing 1,2,3-Triazoles: Site Selectivity and Magnetic Properties.
- Author
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Guha, Pampa M., Hoa Phan, Kinyon, Jared S., Brotherton, Wendy S., Sreenath, Kesavapillai, Tyler Simmons, J., Zhenxing Wang, Clark, Ronald J., Dala, Naresh S., Shatruk, Michael, and Lei Zhu
- Subjects
- *
COPPER , *ACETATES , *COUPLING reactions (Chemistry) , *ALKYNES , *LIGANDS (Chemistry) , *TRIAZOLES , *ELECTRON paramagnetic resonance spectroscopy , *MAGNETIC susceptibility - Abstract
Copper(H) acetate mediated coupling reactions between 2,6-bis(azidomethyl)pyridine or 2-picolylazide and two terminal alkynes afford 1,2,3-triazolyl-containing ligands L1-L6. These ligands contain various nitrogen-based Lewis basic sites including two different pyridyls, two nitrogen atoms on a 1,2,3-triazolyl ring, and the azido group. A rich structural diversity, which includes mononuclear and dinuclear complexes as well as one-dimensional polymers, was observed in the copper(II) complexes of L1-L6. The preference of copper(II) to two comnionbidentate 1,2,3-triazolyl-containing coordination sites was investigated using isothermal titration calorimetry and, using zinc(ll) as a surrogate, in H NMR titration experiments. The magnetic interactions between the copper(fl) centers in three dinuclear complexes were analyzed via temperature-dependent magnetic susceptibility measurements and high-frequency electron paramagnetic resonance spectroscopy. The observed magnetic superexchange is strongly dependent on the orientation of magnetic orbitals of the copper(ll) ions and can be completely turned off if these orbitals are arranged orthogonal to each other. This work demonstrates the versatility of 1,2,3-triazolyl-containing polyaza ligands in frrming metal coordination complexes of a rids structural diversity and interesting magnetic properties. [ABSTRACT FROM AUTHOR]
- Published
- 2012
- Full Text
- View/download PDF
14. Experimental Investigation on the Mechanism of Chelation-Assisted, Copper(II) Acetate-Accelerated Azide-Alkyne Cycloaddition.
- Author
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Gui-Chao Kuang, Guha, Pampa M., Brotherton, Wendy S., Simmons, J. Tyler, Stankee, Lisa A., Nguyen, Brian T., Clark, Ronald J., and Lei Zhu
- Subjects
- *
ALKYNES , *RING formation (Chemistry) , *CHELATES , *AZIDES , *NUCLEAR magnetic resonance - Abstract
A mechanistic model is formulated to account for the high reactivity of chelating azides (organic azides capable of chelation-assisted metal coordination at the alkylated azido nitrogen position) and copper(II) acetate (Cu(OAc)2) in copper(II)-mediated azide—alkyne cycloaddition (AAC) reactions. Fluorescence and ¹H NMR assays are developed for monitoring the reaction progress in two different solvents, methanol and acetonitrile. Solvent kinetic isotopic effect and premixing experiments give credence to the proposed different induction reactions for converting copper(II) to catalytic copper(I) species in methanol (methanol oxidation) and acetonitrile (alkyne oxidative homocoupling), respectively. The kinetic orders of individual components in a chelation-assisted, copper(II)-accelerated AAC reaction are determined in both methanol and acetonitrile. Key conclusions resulting from the kinetic studies include (1) the interaction between copper ion (either in +1 or +2 oxidation state) and a chelating azide occurs in a fast, pre-equilibrium step prior to the formation of the in-cycle copper(I)-acetylide, (2) alkyne deprotonation is involved in several kinetically significant steps, and (3) consistent with prior experimental and computational results by other groups, two copper centers are involved in the catalysis. The X-ray crystal structures of chelating azides with Cu(OAc)2 suggest a mechanistic synergy between alkyne oxidative homocoupling and copper(II)-accelerated AAC reactions, in which both a bimetallic catalytic pathway and a base are involved. The different roles of the two copper centers (a Lewis acid to enhance the electrophilicity of the azido group and a two-electron reducing agent in oxidative metallacycle formation, respectively) in the proposed catalytic cycle suggest that a mixed valency (+2 and +1) dinuclear copper species be a highly efficient catalyst. This proposition is supported by the higher activity of the partially reduced Cu(OAc)2 in mediating a 2-picolylazide-involved AAC reaction than the fully reduced Cu(OAc)2. Finally, the discontinuous kinetic behavior that has been observed by us and others in copper(I/II)-mediated AAC reactions is explained by the likely catalyst disintegration during the course of a relatively slow reaction. Complementing the prior mechanistic conclusions drawn by other investigators, which primarily focus on the copper(I)/alkyne interactions, we emphasize the kinetic significance of copper(I/II)/azide interaction. This work not only provides a mechanism accounting for the fast Cu(OAc)2-mediated AAC reactions involving chelating azides, which has apparent practical implications, but suggests the significance of mixed-valency dinuclear copper species in catalytic reactions where two copper centers carry different functions. [ABSTRACT FROM AUTHOR]
- Published
- 2011
- Full Text
- View/download PDF
15. ChemInform Abstract: On the Mechanism of Copper(I)-Catalyzed Azide-Alkyne Cycloaddition.
- Author
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Zhu, Lei, Brassard, Christopher J., Zhang, Xiaoguang, Guha, P. M., and Clark, Ronald J.
- Subjects
- *
AZIDES , *ALKYNES , *RING formation (Chemistry) , *COPPER catalysts , *ORGANIC chemistry - Abstract
Review: [71 refs. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
- View/download PDF
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