1. Association of HLA-A and Non-Classical HLA Class I Alleles.
- Author
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Carlini F, Ferreira V, Buhler S, Tous A, Eliaou JF, René C, Chiaroni J, Picard C, and Di Cristofaro J
- Subjects
- France, Gene Frequency, Genetic Loci, Genotype, Haplotypes, Humans, Linkage Disequilibrium, Polymorphism, Single Nucleotide, Alleles, HLA-A Antigens genetics, Histocompatibility Antigens Class I genetics
- Abstract
The HLA-A locus is surrounded by HLA class Ib genes: HLA-E, HLA-H, HLA-G and HLA-F. HLA class Ib molecules are involved in immuno-modulation with a central role for HLA-G and HLA-E, an emerging role for HLA-F and a yet unknown function for HLA-H. Thus, the principal objective of this study was to describe the main allelic associations between HLA-A and HLA-H, -G, -F and -E. Therefore, HLA-A, -E, -G, -H and -F coding polymorphisms, as well as HLA-G UnTranslated Region haplotypes (referred to as HLA-G UTRs), were explored in 191 voluntary blood donors. Allelic frequencies, Global Linkage Disequilibrium (GLD), Linkage Disequilibrium (LD) for specific pairs of alleles and two-loci haplotype frequencies were estimated. We showed that HLA-A, HLA-H, HLA-F, HLA-G and HLA-G UTRs were all in highly significant pairwise GLD, in contrast to HLA-E. Moreover, HLA-A displayed restricted associations with HLA-G UTR and HLA-H. We also confirmed several associations that were previously found to have a negative impact on transplantation outcome. In summary, our results suggest complex functional and clinical implications of the HLA-A genetic region., Competing Interests: The authors have declared that no competing interests exist.
- Published
- 2016
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