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Transcription factors play a key role in Penicillium expansum infection process. Although the crucial characteristics of some transcription factors of pathogenic fungi have been found, many transcription factors involved in P. expansum infections have not been explored and studied. This study aimed to screen the transcription factors of P. expansum involved in postharvest pear infections by ATAC-seq analysis and to analyze the differentially expressed peak-related genes by GO enrichment and KEGG pathway analysis. Our results found the up-regulation of differentially expressed peak-related genes involved in the MAPK signaling pathway, pentose phosphate pathway, starch and sucrose metabolism, and pentose and glucuronate interconversions. Our study especially confirmed the differential regulation of transcription factors MCM1, Ste12 and gene WSC in the MAPK signaling pathway and PG1, RPE1 in the pentose and glucuronate interconversions pathway. These transcription factors and related genes might play an essential role in pear fruit infection by P. expansum. RT-qPCR validation of twelve expressed peak-related genes in P. expansum showed that the expression levels of these twelve genes were compatible with the ATAC-Seq. Our findings might shed some light on the regulatory molecular networks consisting of transcription factors that engaged in P. expansum invasion and infection of pear fruits. [ABSTRACT FROM AUTHOR]

• Genes related to resistance were up-regulated in apples induced by W. anomalus. • Genes involved in the synthesis of resistance related substances were up-regulated. • Metabonomic analysis of apples induced by W. anomalus was investigated. • Metabolites related to plant disease resistance in apples were induced by W. anomalus. The antagonistic yeast Wickerhamomyces anomalus was reported to have a biocontrol efficacy against blue mold decay of apples, and possible physiological biocontrol mechanisms were investigated in our previous research. However, the molecular mechanisms related to the resistance response were unclear. In this study, the related molecular mechanisms of disease-resistance in apples induced by W. anomalus based on transcriptomic and metabonomic analysis were investigated. The results of the transcriptome data showed that W. anomalus induced the up-regulation of genes related to resistance, plant signal transduction, genes involved in regulating the synthesis of resistance related substances, and genes related to antioxidant and stress resistance. Integrated transcriptomic and metabonomic analysis indicated that multiple genes involved in the phenylpropane biosynthesis pathway, ubiquinone and other terpenoid-quinone biosynthesis pathway and phenylalanine metabolism pathway were up-regulated, and the contents of corresponding metabolites were also increased, so as to improve the disease resistance of apple fruit. [ABSTRACT FROM AUTHOR]

Penicillium expansum is one of the primary pathogens causing postharvest blue mold of pears, which leads to the spoiling of pulp and produces patulin, endangering food security. Mitogen-activated protein kinase (MAPK) signaling pathway regulates the growth and development, cell wall integrity, and pathogenicity of fungi. Mitogen-activated protein kinase kinase (MKK) in the MAPK signaling pathway has been reflected to be associated with fungal cell wall integrity. Nevertheless, the pivotal function of MKK in the process of P. expansum infection remained unexplored. In this study, MKK was knocked out and repaired by the Agrobacterium -mediated homologous recombination technology to explore the function of MKK in P. expansum infection process. It has been found that the deletion of MKK induces morphological changes in the mutant strain and delayed mycelium and spore growth. Further studies showed that the mutant strain was susceptible to cell wall interference compounds and showed a significant decrease in decay diameters and virulence during the infection of the pears. RT-qPCR analysis showed that the deletion of MKK affected the relative expression levels of its upstream and downstream genes. Our results suggest that MKK is essential in the growth and development, cell wall integrity, pathogenicity, and toxigenic capacity of P. expansum. • MAP kinase MKK negatively affects the growth of Penicillium expansum. • The knockout of MKK reduces the ability of P. expansum to infect the pears. • The knockout of MKK diminishes the toxigenic capacity of P. expansum infecting pears. [ABSTRACT FROM AUTHOR]

Blue mold decay caused by Penicillium expansum is a global destructive postharvest disease, which has brought huge economic losses to the pear industry. Transcription factors play an important role in pear anti-infection defense, and it has been observed that they have multiple functions. However, the roles of numerous TFs in the defense of pear against P. expansum have not been adequately explored. In this study, ATAC-seq was used to screen the TFs of pear against P. expansum , thereby understanding the chromatin-mediated gene regulation in the defense of pear against infection. The peak of differential expression enriched 9 transcription factors (AGL27, AT5G02460, AT2G28810, AT5G66940, AT3G46070 and OBP1, TCP3, BPC1 and TCP17). The up-regulated genes in our study were implicated in the MAPK signaling pathway-plant, plant hormone signal transduction pathway, plant-pathogen interaction pathway, glutathione metabolism pathway, phenylpropanoid biosynthesis, flavonoid biosynthesis pathway and carotenoid biosynthesis pathway were identified. Especially the transcription factors TGA, gene SAUR and CYCD3 in plant hormone signal transduction pathway and NCED , CYP707A in carotenoid biosynthesis pathway were differentially regulated. RT-qPCR analysis of twelve randomly selected differentially expressed peak-related genes confirmed the accuracy of ATAC-seq analysis of P. expansum infected pear. • Transcription factors of pear against P. expansum infection were screened by ATAC-seq. • MAPK signaling pathway in pear was activated by P. expansum. • SAUR , CYCD3 and TF TGA in plant hormone signal transduction pathway were up-regulated. • NCED and CYP707A in carotenoid biosynthesis pathway were up-regulated. [ABSTRACT FROM AUTHOR]