20 results on '"eps matrix"'
Search Results
2. Biodegradation of Nitrile Gloves as Sole Carbon Source of Pseudomonas aeruginosa in Liquid Culture.
- Author
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Delgado-Nungaray, Javier Alejandro, Grajeda-Arias, David, Reynaga-Delgado, Eire, and Gonzalez-Reynoso, Orfil
- Subjects
- *
PSEUDOMONAS aeruginosa , *BIODEGRADATION , *POLLUTANTS , *GLOVES , *ALIPHATIC amines - Abstract
Nitrile gloves have become a significant environmental pollutant after the COVID-19 pandemic due to their single-use design. This study examines the capability of P. aeruginosa to use nitrile gloves as its sole carbon energy source. Biodegradation was determined by P. aeruginosa adapting to increasing nitrile glove concentrations at 1%, 3%, and 5% (w/v). The growth kinetics of P. aeruginosa were evaluated, as well as the polymer weight loss. Topographic changes on the glove surfaces were examined using SEM, and FT-IR was used to evaluate the biodegradation products of the nitrile gloves. Following the establishment of a biofilm on the glove surface, the nitrile toxicity was minimized via biodegradation. The result of the average weight loss of nitrile gloves was 2.25%. FT-IR analysis revealed the presence of aldehydes and aliphatic amines associated with biodegradation. SEM showed P. aeruginosa immersed in the EPS matrix, causing the formation of cracks, scales, protrusions, and the presence of semi-spherical particles. We conclude that P. aeruginosa has the capability to use nitrile gloves as its sole carbon source, even up to 5%, through biofilm formation, demonstrating the potential of P. aeruginosa for the degradation of nitrile gloves. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
3. Temperature-specific adaptations and genetic requirements in a biofilm formed by Pseudomonas aeruginosa.
- Author
-
Bisht, Karishma, Luecke, Alex R., and Wakeman, Catherine A.
- Subjects
MICROCYSTIS aeruginosa ,PSEUDOMONAS aeruginosa ,BIOFILMS ,PHYSIOLOGICAL adaptation ,NOSOCOMIAL infections ,GRAM-negative bacteria ,MICROBIAL communities ,MICROBIAL cells - Abstract
Pseudomonas aeruginosa is a gram-negative opportunistic pathogen often associated with nosocomial infections that are made more severe by this bacterium's ability to form robust biofilms. A biofilm is a microbial community encompassing cells embedded within an extracellular polymeric substrate (EPS) matrix that is typically secreted by the encased microbial cells. Biofilm formation is influenced by several environmental cues, and temperature fluctuations are likely to be an important stimulus in the lifecycle of P. aeruginosa as it transitions between life in aquatic or soil environments to sites of infection in the human host. Previous work has demonstrated that human body temperature can induce a shift in the biofilm EPS relative to room temperature growth, resulting in an incorporation of a filamentous phage coat protein into the biofilm EPS. In this study, we sought to identify adaptations enabling biofilm formation at room temperature or temperatures mimicking the natural environment of P. aeruginosa (23'C and 30'C) relative to temperatures mimicking life in the human host (37'C and 40'C). We identified higher biofilm: biomass ratios at lower temperatures on certain substrates, which correlated with a higher relative abundance of apparent polysaccharide EPS content. However, the known genes for EPS polysaccharide production in P. aeruginosa PA14 did not appear to be specifically important for temperature-dependent biofilm adaptation, with the pelB gene appearing to be generally important and the algD gene being generally expendable in all conditions tested. Instead, we were able to identify two previously uncharacterized hypothetical proteins (PA14_50070 and PA14_67550) specifically required for biofilm formation at 23C and/or 30C relative to temperatures associated with the human host. These unstudied contributors to biofilm integrity may have been previously overlooked since most P. aeruginosa biofilm studies tend to use 37C growth temperatures. Overall, our study demonstrates that temperature shifts can have dramatic impacts on biofilm structure and highlights the importance of studying environment-specific adaptations in biofilm physiology. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
4. Therapeutic Strategies against Biofilm Infections.
- Author
-
Mishra, Sonal, Gupta, Amit, Upadhye, Vijay, Singh, Suresh C., Sinha, Rajeshwar P., and Häder, Donat-P.
- Subjects
- *
MICROBIAL aggregation , *BIOFILMS , *QUORUM sensing , *NANOPARTICLE synthesis , *MICROBIAL cells - Abstract
A biofilm is an aggregation of surface-associated microbial cells that is confined in an extracellular polymeric substance (EPS) matrix. Infections caused by microbes that form biofilms are linked to a variety of animals, including insects and humans. Antibiotics and other antimicrobials can be used to remove or eradicate biofilms in order to treat infections. However, due to biofilm resistance to antibiotics and antimicrobials, clinical observations and experimental research clearly demonstrates that antibiotic and antimicrobial therapies alone are frequently insufficient to completely eradicate biofilm infections. Therefore, it becomes crucial and urgent for clinicians to properly treat biofilm infections with currently available antimicrobials and analyze the results. Numerous biofilm-fighting strategies have been developed as a result of advancements in nanoparticle synthesis with an emphasis on metal oxide np. This review focuses on several therapeutic strategies that are currently being used and also those that could be developed in the future. These strategies aim to address important structural and functional aspects of microbial biofilms as well as biofilms' mechanisms for drug resistance, including the EPS matrix, quorum sensing (QS), and dormant cell targeting. The NPs have demonstrated significant efficacy against bacterial biofilms in a variety of bacterial species. To overcome resistance, treatments such as nanotechnology, quorum sensing, and photodynamic therapy could be used. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
5. Biofilm: A Challenge to Overcome in Wound Healing
- Author
-
Parai, Debaprasad, Dey, Pia, Mukherjee, Samir Kumar, Kumar, Prasun, editor, and Kothari, Vijay, editor
- Published
- 2021
- Full Text
- View/download PDF
6. Antibacterial and antibiofilm efficacy of repurposing drug hexestrol against methicillin-resistant Staphylococcus aureus
- Author
-
Shasha Liu, Pengfei She, Zehao Li, Yimin Li, Linhui Li, Yifan Yang, Linying Zhou, and Yong Wu
- Subjects
Biofilm ,EPS matrix ,ATPase ,Drug Synergism ,Aminoglycosides ,Microbiology ,QR1-502 ,Other systems of medicine ,RZ201-999 - Abstract
There has been an explosion in the prevalence of methicillin-resistant Staphylococcus aureus (MRSA) because of the indiscriminate use of antibiotics. In this study, we repurposed hexestrol (HXS) as an antibacterial agent to fight planktonic and biofilm-related MRSA infections. HXS is a nonsteroidal synthetic estrogen that targets estrogen receptors (ERα and ERβ) and has been used as a hormonal antineoplastic agent. In our work, the minimum inhibitory concentrations (MICs) were determined using the antimicrobial susceptibility of MSSA and MRSA strains. Anti-biofilm activity was evaluated using biofilm inhibition and eradication assays. Biofilm-related genes were analyzed with or without HXS treatment using RTqPCR analysis of S. aureus. HXS was tested using the checkerboard dilution assay to identify antibiotics that may have synergistic effects. Measurement of ATP and detection of ATPase allowed the determination of bacterial energy metabolism. As shown in the results, HXS showed effective antimicrobial activity against S. aureus, including both type strains and clinical isolations, with MICs of 16 µg/mL. Sub-HXS strongly inhibited the adhesion of S. aureus. The content of extracellular polymeric substances (EPS) and the relative transcription levels of eno, sacC, clfA, pls and fnbpB were reduced after HXS treatment. HXS showed antibacterial effects against S. aureus and synergistic activity with aminoglycosides by directly interfering with cellular energy metabolism. HXS inhibits adhesion and biofilm formation and eradicates biofilms formed by MRSA by reducing the expression of related genes. Furthermore, HXS increases the susceptibility of aminoglycosides against MRSA. In conclusion, HXS is a repurposed drug that may be a promising therapeutic option for MRSA infection.
- Published
- 2023
- Full Text
- View/download PDF
7. Temperature-specific adaptations and genetic requirements in a biofilm formed by Pseudomonas aeruginosa
- Author
-
Karishma Bisht, Alex R. Luecke, and Catherine A. Wakeman
- Subjects
biofilm ,thermal adaptation ,Pseudomonas aeruginosa ,environment biofilm ,host biofilm ,EPS matrix ,Microbiology ,QR1-502 - Abstract
Pseudomonas aeruginosa is a gram-negative opportunistic pathogen often associated with nosocomial infections that are made more severe by this bacterium’s ability to form robust biofilms. A biofilm is a microbial community encompassing cells embedded within an extracellular polymeric substrate (EPS) matrix that is typically secreted by the encased microbial cells. Biofilm formation is influenced by several environmental cues, and temperature fluctuations are likely to be an important stimulus in the lifecycle of P. aeruginosa as it transitions between life in aquatic or soil environments to sites of infection in the human host. Previous work has demonstrated that human body temperature can induce a shift in the biofilm EPS relative to room temperature growth, resulting in an incorporation of a filamentous phage coat protein into the biofilm EPS. In this study, we sought to identify adaptations enabling biofilm formation at room temperature or temperatures mimicking the natural environment of P. aeruginosa (23°C and 30°C) relative to temperatures mimicking life in the human host (37°C and 40°C). We identified higher biofilm: biomass ratios at lower temperatures on certain substrates, which correlated with a higher relative abundance of apparent polysaccharide EPS content. However, the known genes for EPS polysaccharide production in P. aeruginosa PA14 did not appear to be specifically important for temperature-dependent biofilm adaptation, with the pelB gene appearing to be generally important and the algD gene being generally expendable in all conditions tested. Instead, we were able to identify two previously uncharacterized hypothetical proteins (PA14_50070 and PA14_67550) specifically required for biofilm formation at 23°C and/or 30°C relative to temperatures associated with the human host. These unstudied contributors to biofilm integrity may have been previously overlooked since most P. aeruginosa biofilm studies tend to use 37°C growth temperatures. Overall, our study demonstrates that temperature shifts can have dramatic impacts on biofilm structure and highlights the importance of studying environment-specific adaptations in biofilm physiology.
- Published
- 2023
- Full Text
- View/download PDF
8. Therapeutic Strategies against Biofilm Infections
- Author
-
Sonal Mishra, Amit Gupta, Vijay Upadhye, Suresh C. Singh, Rajeshwar P. Sinha, and Donat-P. Häder
- Subjects
biofilm ,biofilm infections ,drug resistance ,EPS matrix ,nanoparticles ,quorum sensing ,Science - Abstract
A biofilm is an aggregation of surface-associated microbial cells that is confined in an extracellular polymeric substance (EPS) matrix. Infections caused by microbes that form biofilms are linked to a variety of animals, including insects and humans. Antibiotics and other antimicrobials can be used to remove or eradicate biofilms in order to treat infections. However, due to biofilm resistance to antibiotics and antimicrobials, clinical observations and experimental research clearly demonstrates that antibiotic and antimicrobial therapies alone are frequently insufficient to completely eradicate biofilm infections. Therefore, it becomes crucial and urgent for clinicians to properly treat biofilm infections with currently available antimicrobials and analyze the results. Numerous biofilm-fighting strategies have been developed as a result of advancements in nanoparticle synthesis with an emphasis on metal oxide np. This review focuses on several therapeutic strategies that are currently being used and also those that could be developed in the future. These strategies aim to address important structural and functional aspects of microbial biofilms as well as biofilms’ mechanisms for drug resistance, including the EPS matrix, quorum sensing (QS), and dormant cell targeting. The NPs have demonstrated significant efficacy against bacterial biofilms in a variety of bacterial species. To overcome resistance, treatments such as nanotechnology, quorum sensing, and photodynamic therapy could be used.
- Published
- 2023
- Full Text
- View/download PDF
9. Clostridium difficile Biofilm
- Author
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Vuotto, Claudia, Donelli, Gianfranco, Buckley, Anthony, Chilton, Caroline, COHEN, IRUN R., Series Editor, LAJTHA, ABEL, Series Editor, LAMBRIS, JOHN D., Series Editor, PAOLETTI, RODOLFO, Series Editor, REZAEI, NIMA, Series Editor, Mastrantonio, Paola, editor, and Rupnik, Maja, editor
- Published
- 2018
- Full Text
- View/download PDF
10. Editorial: Insights Into New Strategies to Combat Biofilms
- Author
-
Sujogya Kumar Panda, Silvia Buroni, Vishvanath Tiwari, and Luis Cláudio Nascimento da Silva
- Subjects
antimicrobials ,biofilm ,drug discovery ,EPS matrix ,ESKAPE ,peptides ,Microbiology ,QR1-502 - Published
- 2021
- Full Text
- View/download PDF
11. Editorial: Insights Into New Strategies to Combat Biofilms.
- Author
-
Panda, Sujogya Kumar, Buroni, Silvia, Tiwari, Vishvanath, and Nascimento da Silva, Luis Cláudio
- Subjects
BIOFILMS ,QUORUM sensing ,ANTIBIOTICS ,GLYCERALDEHYDEPHOSPHATE dehydrogenase ,CENTRAL venous catheters - Abstract
Keywords: antimicrobials; biofilm; drug discovery; EPS matrix; ESKAPE; peptides; quorum sensing EN antimicrobials biofilm drug discovery EPS matrix ESKAPE peptides quorum sensing 1 5 5 09/29/21 20210923 NES 210923 Biofilms form a complex layer with defined structures, that attach on biotic or abiotic surfaces, are tough to eradicate and tend to cause some resistance against most antibiotics (Sahoo et al., [6]). Antibiofilm Compounds from Endophytes Among natural products, a metabolite produced by the endophytic bacterium I Streptomyces ansochromogenes i has been shown to own both antibacterial and anti-biofilm activity against I P. aeruginosa i (Alves da Fonseca Amorim et al.). Anti-Fungal and Anti-Biofilm Compounds The development of chronic and recurrent infections by I Candida albicans i is also attributed to biofilm formation and I C. albicans i is the most prevalent human fungal pathogen in both immunocompetent and immunocompromised individuals (Kerkoub et al., [2]). [Extracted from the article]
- Published
- 2021
- Full Text
- View/download PDF
12. The influence of substrate surface conditioning and biofilm age on the composition of Enterococcus faecalis biofilms.
- Author
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Ali, I. A. A., Cheung, B. P. K., Yau, J. Y. Y., Matinlinna, J. P., Lévesque, C. M., Belibasakis, G. N., and Neelakantan, P.
- Subjects
- *
ENTEROCOCCUS faecalis , *BIOFILMS testing , *HYDROXYAPATITE , *SUBSTRATES (Materials science) , *SURFACE analysis - Abstract
Aim: To investigate the null hypothesis that neither the surface conditioning (collagen, serum, saliva) of hydroxyapatite (HA) discs, nor the biofilm age (3 days vs. 21 days) has a significant effect on the cellular and matrix composition of biofilms, using Enterococcus faecalis as the model organism. Methodology: Sterile HA discs were conditioned with collagen, saliva or serum, and inoculated with E. faecalis to form 3‐day and 21‐day‐old biofilms. Unconditioned discs served as controls. The biofilms were analysed using culture‐dependent and independent (confocal microscopy and biochemical analysis) methods, to determine the colony‐forming units and the biofilm matrix composition (polysaccharides and proteins), respectively. Statistical analyses were performed using appropriate parametric and nonparametric tests (P = 0.05). Results: Collagen conditioning significantly increased the number of CFUs in the 21‐day biofilms, compared to the 3‐day biofilms (P < 0.05). Although the biochemical analysis revealed that surface conditioning had no significant effect on the total carbohydrate content in the 21‐day biofilms, confocal microscopic analysis revealed that collagen and saliva conditioning selectively increased the polysaccharide content of 21‐day biofilms, compared to the 3‐day biofilms (P < 0.05). Conclusions: The results of this study raise an important methodological concern that the substrate conditioning substances and biofilm age differentially influence the cellular and extracellular matrix components of E. faecalis biofilms. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
13. Endodontic Microbiology—A Special Issue of Dentistry Journal
- Author
-
Prasanna Neelakantan
- Subjects
biofilm ,EPS matrix ,intracanal medicaments ,endotoxin/lipopolysaccharide ,lipoteichoic acid ,nanoparticles ,persistent infection ,quorum sensing ,root canal disinfection ,root canal irrigants ,reinfection ,virulence ,Dentistry ,RK1-715 - Abstract
Understanding microbiology, specifically biofilm biology is an essential component of creating targeted therapeutic modalities that are effective and efficient.[...]
- Published
- 2018
- Full Text
- View/download PDF
14. Antibacterial and antibiofilm efficacy of repurposing drug hexestrol against methicillin-resistant Staphylococcus aureus.
- Author
-
Liu, Shasha, She, Pengfei, Li, Zehao, Li, Yimin, Li, Linhui, Yang, Yifan, Zhou, Linying, and Wu, Yong
- Subjects
METHICILLIN-resistant staphylococcus aureus ,METHICILLIN ,DRUG repositioning ,DRUG efficacy ,ESTROGEN receptors ,BACTERIAL metabolism - Abstract
There has been an explosion in the prevalence of methicillin-resistant Staphylococcus aureus (MRSA) because of the indiscriminate use of antibiotics. In this study, we repurposed hexestrol (HXS) as an antibacterial agent to fight planktonic and biofilm-related MRSA infections. HXS is a nonsteroidal synthetic estrogen that targets estrogen receptors (ERα and ERβ) and has been used as a hormonal antineoplastic agent. In our work, the minimum inhibitory concentrations (MICs) were determined using the antimicrobial susceptibility of MSSA and MRSA strains. Anti-biofilm activity was evaluated using biofilm inhibition and eradication assays. Biofilm-related genes were analyzed with or without HXS treatment using RT qPCR analysis of S. aureus. HXS was tested using the checkerboard dilution assay to identify antibiotics that may have synergistic effects. Measurement of ATP and detection of ATPase allowed the determination of bacterial energy metabolism. As shown in the results, HXS showed effective antimicrobial activity against S. aureus , including both type strains and clinical isolations, with MICs of 16 µg/mL. Sub-HXS strongly inhibited the adhesion of S. aureus. The content of extracellular polymeric substances (EPS) and the relative transcription levels of eno , sacC , clfA , pls and fnbpB were reduced after HXS treatment. HXS showed antibacterial effects against S. aureus and synergistic activity with aminoglycosides by directly interfering with cellular energy metabolism. HXS inhibits adhesion and biofilm formation and eradicates biofilms formed by MRSA by reducing the expression of related genes. Furthermore, HXS increases the susceptibility of aminoglycosides against MRSA. In conclusion, HXS is a repurposed drug that may be a promising therapeutic option for MRSA infection. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
15. Editorial: Insights Into New Strategies to Combat Biofilms
- Author
-
Luís Cláudio Nascimento da Silva, Sujogya Kumar Panda, Silvia Buroni, and Vishvanath Tiwari
- Subjects
Microbiology (medical) ,Quorum sensing ,EPS matrix ,peptides ,Biofilm ,ESKAPE ,Biology ,Microbiology ,antimicrobials ,biofilm ,QR1-502 ,drug discovery - Published
- 2021
- Full Text
- View/download PDF
16. Enzyme-Functionalized Mesoporous Silica Nanoparticles to Target Staphylococcus aureus and Disperse Biofilms
- Author
-
Dishon Hiebner, Eoin Casey, Henry Devlin, James P. O'Gara, and Stephanie Fulaz
- Subjects
Methicillin-Resistant Staphylococcus aureus ,Staphylococcus aureus ,Cell Survival ,Biophysics ,Pharmaceutical Science ,Bioengineering ,MRSA ,Microbial Sensitivity Tests ,02 engineering and technology ,010402 general chemistry ,medicine.disease_cause ,01 natural sciences ,Microbiology ,Biomaterials ,Extracellular polymeric substance ,International Journal of Nanomedicine ,Drug Discovery ,medicine ,Humans ,MTT assay ,Biomass ,Viability assay ,Original Research ,EPS matrix ,antibiofilm ,Extracellular Polymeric Substance Matrix ,Lysostaphin ,Chemistry ,Organic Chemistry ,Biofilm ,General Medicine ,biochemical phenomena, metabolism, and nutrition ,Silicon Dioxide ,021001 nanoscience & nanotechnology ,Antimicrobial ,Enzymes ,0104 chemical sciences ,Biofilms ,antimicrobial ,Nanoparticles ,lysostaphin ,Nanocarriers ,0210 nano-technology ,Porosity - Abstract
Henry Devlin,1,* Stephanie Fulaz,1,* Dishon Wayne Hiebner,1 James P O’Gara,2 Eoin Casey1 1UCD School of Chemical and Bioprocess Engineering, University College Dublin, Dublin, Ireland; 2Department of Microbiology, School of Natural Sciences, National University of Ireland, Galway, Ireland*These authors contributed equally to this workCorrespondence: Eoin CaseyUCD School of Chemical and Bioprocess Engineering, University College Dublin, Belfield, Dublin, IrelandEmail eoin.casey@ucd.ieBackground: Staphylococcus aureus biofilms pose a unique challenge in healthcare due to their tolerance to a wide range of antimicrobial agents. The high cost and lengthy timeline to develop novel therapeutic agents have pushed researchers to investigate the use of nanomaterials to deliver antibiofilm agents and target biofilm infections more efficiently. Previous studies have concentrated on improving the efficacy of antibiotics by deploying nanoparticles as nanocarriers. However, the dispersal of the extracellular polymeric substance (EPS) matrix in biofilm-associated infections is also critical to the development of novel nanoparticle-based therapies.Methods: This study evaluated the efficacy of enzyme-functionalized mesoporous silica nanoparticles (MSNs) against methicillin-resistant S. aureus (MRSA) and methicillin-sensitive S. aureus (MSSA) biofilms. MSNs were functionalized with the enzyme lysostaphin, which causes cell lysis of S. aureus bacteria. This was combined with two other enzyme functionalized MSNs, serrapeptase and DNase I which will degrade protein and eDNA in the EPS matrix, to enhance eradication of the biofilm. Cell viability after treatment with enzyme-functionalized MSNs was assessed using a MTT assay and CLSM, while crystal violet staining was used to assess EPS removal.Results: The efficacy of all three enzymes against S. aureus cells and biofilms was significantly improved when they were immobilized onto MSNs. Treatment efficacy was further enhanced when the three enzymes were used in combination against both MRSA and MSSA. Regardless of biofilm maturity (24 or 48 h), near-complete dispersal and killing of MRSA biofilms were observed after treatment with the enzyme-functionalized MSNs. Disruption of mature MSSA biofilms with a polysaccharide EPS was less efficient, but cell viability was significantly reduced.Conclusion: The combination of these three enzymes and their functionalization onto nanoparticles might extend the therapeutic options for the treatment of S. aureus infections, particularly those with a biofilm component.Keywords: MRSA, lysostaphin, antimicrobial, antibiofilm, EPS matrix
- Published
- 2021
17. Extracellular DNA in Helicobacter pylori biofilm: a backstairs rumour.
- Author
-
Grande, R., Di Giulio, M., Bessa, L. J., Di Campli, E., Baffoni, M., Guarnieri, S., and Cellini, L.
- Subjects
- *
HELICOBACTER pylori , *BIOFILMS , *EXTRACELLULAR matrix , *GENETIC recombination , *DNA , *CONFOCAL microscopy - Abstract
This study detected and characterized the extracellular DNA (eDNA) in the biofilm extracellular polymeric substance (EPS) matrix of Helicobacter pylori and investigated the role of such component in the biofilm development. Extracellular DNA was purified and characterized in a 2-day-old mature biofilm developed by the reference strain H. pylori ATCC 43629, the clinical isolate H. pylori SDB60 and the environmental strain H. pylori MDC1. Subsequently, the role of eDNA in the H. pylori biofilm was evaluated by adding DNase I during biofilm formation and on mature biofilms. Extracellular DNA was detected in the 2-day-old EPS biofilm matrix of all analysed H. pylori strains. The DNA fingerprintings, performed by RAPD analysis, on eDNA and intracellular DNA (iDNA), showed some remarkable differences. The data obtained by microtitre biofilm assay as well as colony forming unit count and CLSM (confocal laser scanning microscopy) qualitative analysis did not show any significant differences between the DNase I-treated biofilms and the corresponding not treated controls both in formation and on mature biofilms. In this study, we provide evidence that eDNA is a component of the EPS matrix of H. pylori biofilm. The different profiles of eDNA and iDNA indicate that lysed cells are not the primary source of eDNA release, suggesting that other active mechanisms might be involved in this process. Moreover, the biomass assay suggests that eDNA may not be the main component of biofilm matrix, suggesting that it could be primarily involved in other mechanisms such as recombination processes, via transformation, contributing to the wide genomic variability of this micro-organism defined as a 'quasi-species'. The presence of eDNA in H. pylori biofilm can contribute to the active dynamic exchange of information aimed to reach the best condition for the bacterial survival in the host and in the environment. [ABSTRACT FROM AUTHOR]
- Published
- 2011
- Full Text
- View/download PDF
18. Surface functionalization-dependent localization and affinity of SiO2 nanoparticles within the biofilm EPS matrix
- Author
-
Eoin Casey, Caio H. N. Barros, Stefania Vitale, Laura Quinn, and Dishon Hiebner
- Subjects
lcsh:Biotechnology ,030303 biophysics ,lcsh:QR1-502 ,Physicochemical interactions ,Nanoparticle ,Pseudomonas fluorescens ,Matrix (biology) ,Polysaccharide ,Applied Microbiology and Biotechnology ,Microbiology ,lcsh:Microbiology ,Article ,03 medical and health sciences ,Extracellular polymeric substance ,lcsh:TP248.13-248.65 ,Bacterial biofilm ,Molecular Biology ,chemistry.chemical_classification ,0303 health sciences ,EPS matrix ,biology ,Chemistry ,Biofilm ,Colocalization ,Cell Biology ,biology.organism_classification ,Biophysics ,Nanoparticles ,Surface modification ,Macromolecule - Abstract
The contribution of the biofilm extracellular polymeric substance (EPS) matrix to reduced antimicrobial susceptibility in biofilms is widely recognised. As such, the direct targeting of the EPS matrix is a promising biofilm control strategy that allows for the disruption of the matrix, thereby allowing a subsequent increase in susceptibility to antimicrobial agents. To this end, surface-functionalized nanoparticles (NPs) have received considerable attention. However, the fundamental understanding of the interactions occurring between engineered NPs and the biofilm EPS matrix has not yet been fully elucidated. An insight into the underlying mechanisms involved when a NP interacts with the EPS matrix will aid in the design of more efficient NPs for biofilm control. Here we demonstrate the use of highly specific fluorescent probes in confocal laser scanning microscopy (CLSM) to illustrate the distribution of EPS macromolecules within the biofilm. Thereafter, a three-dimensional (3D) colocalization analysis was used to assess the affinity of differently functionalized silica NPs (SiNPs) and EPS macromolecules from Pseudomonas fluorescens biofilms. Results show that both the charge and surface functional groups of SiNPs dramatically affected the extent to which SiNPs interacted and localized with EPS macromolecules, including proteins, polysaccharides and DNA. Hypotheses are also presented about the possible physicochemical interactions which may be dominant in EPS matrix-NP interactions. This research not only develops an innovative CLSM-based methodology for elucidating biofilm-nanoparticle interactions but also provides a platform on which to build more efficient NP systems for biofilm control., Highlights • Study of NP-EPS interaction via novel combinations of specific probes and CLSM. • Colocalization analysis revealed surface dependent high affinity NP-EPS interactions. • NP surface functionalization strongly affects their interaction with the EPS matrix. • NPs show differential binding to proteins, polysaccharides and eDNA in the EPS.
- Published
- 2020
- Full Text
- View/download PDF
19. Endodontic Microbiology—A Special Issue of Dentistry Journal.
- Author
-
Neelakantan, Prasanna
- Subjects
BIOFILMS ,ENDOTOXINS - Published
- 2018
- Full Text
- View/download PDF
20. Increased Intraspecies Diversity in Escherichia coli Biofilms Promotes Cellular Growth at the Expense of Matrix Production
- Author
-
Filipe Mergulhão, Nuno F. Azevedo, Andreia S. Azevedo, Gislaine P. Gerola, João Santos Baptista, J. Peres, Carina Almeida, Universidade do Minho, and Instituto de Investigação e Inovação em Saúde
- Subjects
0301 basic medicine ,Microbiology (medical) ,030106 microbiology ,Catheter-associated urinary tract infections ,Biology ,Matrix (biology) ,Matrix production ,medicine.disease_cause ,Biochemistry ,Microbiology ,Article ,03 medical and health sciences ,Extracellular polymeric substance ,Confocal laser scanning microscopy ,medicine ,Escherichia coli ,peptide nucleic acid-fluorescence in situ hybridization ,Pharmacology (medical) ,General Pharmacology, Toxicology and Pharmaceutics ,confocal laser scanning microscopy ,EPS matrix ,Science & Technology ,Peptide nucleic acid-fluorescence in situ hybridization ,Cell growth ,catheter-associated urinary tract infections ,lcsh:RM1-950 ,Biofilm ,biochemical phenomena, metabolism, and nutrition ,Antimicrobial ,Urinary tract infections ,intraspecies community ,3. Good health ,lcsh:Therapeutics. Pharmacology ,030104 developmental biology ,Infectious Diseases ,Biofilms ,Intraspecies community ,urinary tract infections ,biofilms - Abstract
Intraspecies diversity in biofilm communities is associated with enhanced survival and growth of the individual biofilm populations. Studies on the subject are scarce, namely, when more than three strains are present. Hence, in this study, the influence of intraspecies diversity in biofilm populations composed of up to six different Escherichia coli strains isolated from urine was evaluated in conditions mimicking the ones observed in urinary tract infections and catheter-associated urinary tract infections. In general, with the increasing number of strains in a biofilm, an increase in cell cultivability and a decrease in matrix production were observed. For instance, single-strain biofilms produced an average of 73.1 µ, g·, cm&minus, 2 of extracellular polymeric substances (EPS), while six strains biofilms produced 19.9 µ, 2. Hence, it appears that increased genotypic diversity in a biofilm leads E. coli to direct energy towards the production of its offspring, in detriment of the production of public goods (i.e., matrix components). Apart from ecological implications, these results can be explored as another strategy to reduce the biofilm burden, as a decrease in EPS matrix production may render these intraspecies biofilms more sensitive to antimicrobial agents.
- Full Text
- View/download PDF
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