1. Molecular characteristics of eae-positive clinical Shiga toxin-producing Escherichia coli in Sweden
- Author
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Xi Yang, Milan Chromek, Sverker Hansson, Xiangning Bai, Cecilia Jernberg, Andreas Matussek, Chengsong Wan, Ji Zhang, Ying Hua, Yanwen Xiong, and Anne Frykman
- Subjects
0301 basic medicine ,Epidemiology ,clinical significance ,intimin ,Infektionsmedicin ,medicine.disease_cause ,fluids and secretions ,immune system diseases ,Shiga toxin-producing Escherichia coli ,hemic and lymphatic diseases ,Drug Discovery ,Prevalence ,gene diversity ,Escherichia coli Infections ,Phylogeny ,Shiga-Toxigenic Escherichia coli ,biology ,Escherichia coli Proteins ,High-Throughput Nucleotide Sequencing ,Shiga toxin ,General Medicine ,Bacterial Typing Techniques ,Diarrhea ,Infectious Diseases ,Population Surveillance ,Bloody diarrhea ,medicine.symptom ,Research Article ,Infectious Medicine ,eae gene ,030106 microbiology ,Immunology ,Microbiology ,Asymptomatic ,03 medical and health sciences ,Virology ,medicine ,Humans ,Serotyping ,Adhesins, Bacterial ,Escherichia coli ,hemolytic uremic syndrome ,Intimin ,Sweden ,Whole Genome Sequencing ,business.industry ,biochemical phenomena, metabolism, and nutrition ,bacterial infections and mycoses ,030104 developmental biology ,Carriage ,Hemolytic-Uremic Syndrome ,biology.protein ,bacteria ,Parasitology ,business - Abstract
Shiga toxin (Stx)-producing Escherichia coli (STEC) can cause a wide range of symptoms from asymptomatic carriage, mild diarrhea to bloody diarrhea (BD) and hemolytic uremic syndrome (HUS). Intimin, encoded by the eae gene, also plays a critical role in STEC pathogenesis. Herein, we investigated the prevalence and genetic diversity of eae among clinical STEC isolates from patients with diarrhea, BD, HUS as well as from asymptomatic STEC-positive individuals in Sweden with whole-genome sequencing. We found that 173 out of 239 (72.4%) of clinical STEC strains were eae positive. Six eae subtypes (epsilon 1, gamma 1, beta 3, theta, zeta and rho) were identified eae and its subtype gamma 1 were significantly overrepresented in O157:H7 strains isolated from BD and HUS patients. epsilon 1 was associated with O121:H19 and O103:H2 strains, and beta 3 to O26:H11 strains. The combination of eae subtype gamma 1 and stx subtype (stx (2) or stx (1)+stx (2)) is more likely to cause severe disease, suggesting the possibility of using eae genotypes in risk assessment of STEC infection. In summary, this study demonstrated a high prevalence of eae in clinical STEC strains and considerable genetic diversity of eae in STEC strains in Sweden from 1994 through 2018, and revealed association between eae subtypes and disease severity. Funding Agencies|Scandinavian Society for Antimicrobial Chemotherapy Foundation [SLS884041]; National Natural Science Foundation of ChinaNational Natural Science Foundation of China (NSFC) [81701977]; Natural Science Foundations of Guangdong ProvinceNational Natural Science Foundation of Guangdong Province [2018B030311063, 2019A1515111004]
- Published
- 2020
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