1. Human erythroleukemia genetics and transcriptomes identify master transcription factors as functional disease drivers
- Author
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Silvia Salmoiraghi, Daniel Birnbaum, Loïc Garçon, Frederik Otzen Bagger, Zakia Aid, Alexandre Fagnan, Benjamin Uzan, Stephane de Botton, Maria Riera Piqué-Borràs, Cécile K. Lopez, Christine Dierks, Connor Sweeney, Eric Delabesse, Juerg Schwaller, Elie Robert, Kazuya Shimoda, Zahra Kadri, Thomas Pabst, Jaroslaw P. Maciejewski, Betty Leite, Alexis Caulier, Sébastien Malinge, Samantha Tauchmann, Catherine Carmichael, Amina Kurtovic-Kozaric, Olivier A. Bernard, Virginie Deleuze, Ute M. Moll, Paresh Vyas, Martin Carroll, Veronique De Mas, Orietta Spinelli, Thomas Mercher, Hélène Lapillonne, Cathy Ignacimouttou, Charles G. Mullighan, Eric Soler, V. Gelsi-Boyer, Peter Valent, Cécile Thirant, Jean Baptiste Micol, Eduardo Anguita, Ilaria Iacobucci, Benjamin T. Kile, and Centre National de la Recherche Scientifique (CNRS)
- Subjects
Male ,Myeloid ,Erythroblasts ,[SDV]Life Sciences [q-bio] ,Biochemistry ,Transcriptome ,Mice ,0302 clinical medicine ,Mice, Inbred NOD ,hemic and lymphatic diseases ,Erythropoiesis ,GATA1 Transcription Factor ,Gene Knock-In Techniques ,RNA-Seq ,0303 health sciences ,education.field_of_study ,Myeloid leukemia ,GATA1 ,Hematology ,Middle Aged ,Neoplasm Proteins ,3. Good health ,DNA-Binding Proteins ,Leukemia ,Haematopoiesis ,Cell Transformation, Neoplastic ,medicine.anatomical_structure ,Radiation Chimera ,030220 oncology & carcinogenesis ,Neoplastic Stem Cells ,Female ,Adult ,Immunology ,Population ,Mice, Transgenic ,Biology ,Dioxygenases ,Genetic Heterogeneity ,Young Adult ,03 medical and health sciences ,Transcriptional Regulator ERG ,Proto-Oncogene Proteins ,Exome Sequencing ,medicine ,Animals ,Humans ,Epigenetics ,education ,030304 developmental biology ,Cell Biology ,Hematopoietic Stem Cells ,medicine.disease ,Mice, Inbred C57BL ,Repressor Proteins ,Mutation ,Cancer research ,Leukemia, Erythroblastic, Acute ,Transcription Factors - Abstract
Acute erythroleukemia (AEL or acute myeloid leukemia [AML]-M6) is a rare but aggressive hematologic malignancy. Previous studies showed that AEL leukemic cells often carry complex karyotypes and mutations in known AML-associated oncogenes. To better define the underlying molecular mechanisms driving the erythroid phenotype, we studied a series of 33 AEL samples representing 3 genetic AEL subgroups including TP53-mutated, epigenetic regulator-mutated (eg, DNMT3A, TET2, or IDH2), and undefined cases with low mutational burden. We established an erythroid vs myeloid transcriptome-based space in which, independently of the molecular subgroup, the majority of the AEL samples exhibited a unique mapping different from both non-M6 AML and myelodysplastic syndrome samples. Notably, >25% of AEL patients, including in the genetically undefined subgroup, showed aberrant expression of key transcriptional regulators, including SKI, ERG, and ETO2. Ectopic expression of these factors in murine erythroid progenitors blocked in vitro erythroid differentiation and led to immortalization associated with decreased chromatin accessibility at GATA1-binding sites and functional interference with GATA1 activity. In vivo models showed development of lethal erythroid, mixed erythroid/myeloid, or other malignancies depending on the cell population in which AEL-associated alterations were expressed. Collectively, our data indicate that AEL is a molecularly heterogeneous disease with an erythroid identity that results in part from the aberrant activity of key erythroid transcription factors in hematopoietic stem or progenitor cells.
- Published
- 2020
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