1,179 results on '"Jian Huang"'
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2. Genome sequencing and transcriptome analyses provide insights into the origin and domestication of water caltrop (Trapaspp., Lythraceae)
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Ye Yuan, Kenneth M. Olsen, Hans Peter Comes, Zi-Jian Huang, Rui-Sen Lu, Zheng Li, Xin-Yi Zhang, Yi Guo, Zhai-Sheng Zheng, Ling-Yun Wang, Jun Chen, Yang Chen, Ying-Xiong Qiu, Yu Feng, and Guo-Ping Sun
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Crops, Agricultural ,Lythraceae ,Gene Expression Profiling ,Water ,food and beverages ,Plant Science ,Biology ,biology.organism_classification ,Genome ,Domestication ,Crop ,Plant Breeding ,Water caltrop ,Aquatic plant ,Botany ,Ploidy ,Selective sweep ,Agronomy and Crop Science ,Genome, Plant ,Biotechnology - Abstract
Humans have domesticated diverse species from across the plant kingdom, however our current understanding of plant domestication is largely founded on major cereal crops. Here, we examine the evolutionary processes and genetic basis underlying the domestication of water caltrop (Trapa spp., Lythraceae), a traditional, yet presently-underutilized non-cereal crop that sustained early Chinese agriculturalists. We generated a chromosome-level genome assembly of tetraploid T. natans, and then divided the allotetraploid genome into two subgenomes. Based on resequencing data from 57 accessions, representing cultivated diploid T. natans, wild T. natans (2x and 4x) and diploid T. incisa, we showed that water caltrop was likely first domesticated in the Yangtze River Valley as early as 6,300 yr BP, and experienced a second improvement c. 800 years ago. We also provided strong support for an allotetraploid origin of T. natans within the past 230,000-310,000 years. By integrating selective sweep and transcriptome profiling analyses, we identified a number of genes potentially selected and/or differentially expressed during domestication, some of which likely contributed not only to larger fruit sizes but also to a more vigorous root system, facilitating nutrient uptake, environmental stress response, and underwater photosynthesis. Our results shed light on the evolutionary and domestication history of water caltrop, one of the earliest domesticated crops in China. This study has implications for genomic-assisted breeding of this presently underutilized aquatic plant, and improves our general understanding of plant domestication.
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- 2021
3. Effect of Heat Stress on Hippocampal Neurogenesis: Insights into the Cellular and Molecular Basis of Neuroinflammation-Induced Deficits
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Yongji Wu, Xiaoyan Zhu, Jian Huang, Shanting Zhao, and Xuejun Chai
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Cellular and Molecular Neuroscience ,Neuronal damage ,Neurogenesis ,Cognition ,Cell Biology ,General Medicine ,Biology ,Hippocampal formation ,Cognitive impairment ,Neuroscience ,Neuroinflammation ,Heat stress - Abstract
Heat stress is known to result in neuroinflammation, neuronal damage, and disabilities in learning and memory in animals and humans. It has previously been reported that cognitive impairment caused by neuroinflammation may at least in part be mediated by defective hippocampal neurogenesis, and defective neurogenesis has been linked to aberrantly activated microglial cells. Moreover, the release of cytokines within the brain has been shown to contribute to the disruption of cognitive functions in several conditions following neuroinflammation. In this review, we summarize evolving evidence for the current understanding of inflammation-induced deficits in hippocampal neurogenesis, and the resulting behavioral impairments after heat stress. Furthermore, we provide valuable insights into the molecular and cellular mechanisms underlying neuroinflammation-induced deficits in hippocampal neurogenesis, particularly relating to cognitive dysfunction following heat stress. Lastly, we aim to identify potential mechanisms through which neuroinflammation induces cognitive dysfunction, and elucidate how neuroinflammation contributes to defective hippocampal neurogenesis. This review may therefore help to better understand the relationship between hippocampal neurogenesis and heat stress.
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- 2021
4. Genetic mutation analysis of 22 patients with congenital absence of vas deferens: a single-center study
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Ying Tang, Yong-Jun Xu, Feng-Hua Lan, Mei-Yu Zheng, Wu-Jian Huang, and Mao-Qing Tan
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Adult ,Male ,China ,Candidate gene ,DNA Mutational Analysis ,Mutation, Missense ,Cystic Fibrosis Transmembrane Conductance Regulator ,Receptors, G-Protein-Coupled ,Male infertility ,symbols.namesake ,Vas Deferens ,Asian People ,Male Urogenital Diseases ,medicine ,Humans ,Missense mutation ,Epithelial Sodium Channels ,Gene ,Infertility, Male ,Azoospermia ,Genetics ,Sanger sequencing ,Polymorphism, Genetic ,biology ,Sodium-Hydrogen Exchanger 3 ,High-Throughput Nucleotide Sequencing ,Sequence Analysis, DNA ,Cell Biology ,General Medicine ,medicine.disease ,Congenital absence of the vas deferens ,Cystic fibrosis transmembrane conductance regulator ,Solute carrier family ,Reproductive Medicine ,Mutation ,symbols ,biology.protein - Abstract
Congenital absence of the vas deferens (CAVD), a congenital malformation of the male reproductive system, causes obstructive azoospermia and male infertility. Currently, the cystic fibrosis transmembrane conductance regulator (CFTR) has been recognized as the main pathogenic gene in CAVD, with some other genes, such as adhesion G-protein-coupled receptor G2 (ADGRG2), solute carrier family 9 isoform 3 (SLC9A3), sodium channel epithelial 1 subunit beta (SCNN1B), and carbonic anhydrase 12 (CA12), being candidate genes in the pathogenesis of CAVD. However, the frequency and spectrum of these mutations, as well as the pathogenic mechanisms of CAVD, have not been fully investigated. Here, we sequenced all genes with potentially pathogenic mutations using next-generation sequencing and verified all identified variants by Sanger sequencing. Further bioinformatic analysis was performed to predict the pathogenicity of mutations. We described the distribution of the p.V470M, poly-T, and TG-repeat CFTR polymorphisms and identified novel missense mutations in the CFTR and SLC9A3 genes, respectively. Taken together, we identified mutations in the CFTR, ADGRG2, SLC9A3, SCNN1B, and CA12 genes in 22 patients with CAVD, thus broadening the genetic spectrum of Chinese patients with CAVD.
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- 2021
5. OBHS impairs the viability of breast cancer via decreasing ERα and Atg13
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Hai-Bing Zhou, Jiawei Zhou, Jian Huang, and Rong Shen
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Cell Survival ,Biophysics ,Autophagy-Related Proteins ,Estrogen receptor ,Antineoplastic Agents ,Breast Neoplasms ,Biology ,Biochemistry ,Breast cancer ,medicine ,Humans ,skin and connective tissue diseases ,Molecular Biology ,Transcription factor ,Cells, Cultured ,Cell Proliferation ,Autophagy ,Estrogen Receptor alpha ,Cancer ,Cell Biology ,Autophagy-related protein 13 ,Bridged Bicyclo Compounds, Heterocyclic ,medicine.disease ,HEK293 Cells ,Selective estrogen receptor modulator ,Cancer research ,Drug Screening Assays, Antitumor ,Sulfonic Acids ,Estrogen receptor alpha - Abstract
Breast cancer (BRCA) is one of the most threatening cancer types, especially among the female population. 70% of breast cancer are estrogen receptor α (ERα) positive and endocrine therapy is effective to decrease breast cancer risk. Autophagy, a highly conserved cellular recycling process, has been regarded to serve a protective role in BRCA. Autophagy-related gene 13 (Atg13) is participated in autophagy and is critical to autophagy initiation. Briefly, we observed that ERα, a well-known transcription factor that can promote breast cancer cell proliferation, expressed higher in breast cancer tissues. Moreover, ERα had a significant positive correlation with Atg13 and may be able to regulate the transcription of Atg13 via binding the promoter region of Atg13. Surprisingly, Oxabicycloheptene sulfonate (OBHS), the drug that we reported as a selective estrogen receptor modulator (SERM) before, may have the ability to decrease the expression of ERα and suppress the autophagy. In conclusion. We found that ERα could be involved in autophagy by binding the promoter of Atg13, and compound OBHS may be able to affect the viability of breast cancer cells by decreasing the expression of ERα and Atg13.
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- 2021
6. A consolidated AAV system for single-cut CRISPR correction of a common Duchenne muscular dystrophy mutation
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Hui Li, Rhonda Bassel-Duby, Yu Zhang, Pradeep P.A. Mammen, Eric N. Olson, Takahiko Nishiyama, Jian Huang, Alex A. Mireault, Zhaoning Wang, Efrain Sanchez-Ortiz, and Ayhan Atmanli
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musculoskeletal diseases ,Duchenne muscular dystrophy ,induced pluripotent stem cells ,exon reframing ,Biology ,QH426-470 ,medicine.disease_cause ,Exon ,CRISPR/Cas ,Genome editing ,medicine ,Genetics ,CRISPR ,Molecular Biology ,Mutation ,QH573-671 ,Cas9 ,gene editing ,AAV ,SaCas9 ,medicine.disease ,Exon skipping ,Cell biology ,biology.protein ,Molecular Medicine ,Original Article ,sgRNA ,Dystrophin ,Cytology ,exon skipping - Abstract
Duchenne muscular dystrophy (DMD), caused by mutations in the X-linked dystrophin gene, is a lethal neuromuscular disease. Correction of DMD mutations in animal models has been achieved by CRISPR/Cas9 genome editing using Streptococcus pyogenes Cas9 (SpCas9) delivered by adeno-associated virus (AAV). However, due to the limited viral packaging capacity of AAV, two AAV vectors are required to deliver the SpCas9 nuclease and its single guide RNA (sgRNA), impeding its therapeutic application. We devised an efficient single-cut gene-editing method using a compact Staphylococcus aureus Cas9 (SaCas9) to restore the open reading frame of exon 51, the most commonly affected out-of-frame exon in DMD. Editing of exon 51 in cardiomyocytes derived from human induced pluripotent stem cells revealed a strong preference for exon reframing via a two-nucleotide deletion. We adapted this system to express SaCas9 and sgRNA from a single AAV9 vector. Systemic delivery of this All-In-One AAV9 system restored dystrophin expression and improved muscle contractility in a mouse model of DMD with exon 50 deletion. These findings demonstrate the effectiveness of CRISPR/SaCas9 delivered by a consolidated AAV delivery system in the correction of DMD in vivo, representing a promising therapeutic approach to correct the genetic causes of DMD., Graphical abstract, CRISPR/Cas-mediated gene editing is being used for therapeutic purposes. In this study, Zhang et al. developed a consolidated AAV delivery system to package both SaCas9 nuclease and sgRNA in a single AAV vector and correct Duchenne muscular dystrophy mutations in human cardiomyocytes and mice.
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- 2021
7. Ligand-induced native G-quadruplex stabilization impairs transcription initiation
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Wen Wang, Jian Huang, Qiuzi Li, Beili Huang, Zhinang Yin, Honghong Wang, Conghui Li, Ruijing Xiao, Kaiwei Liang, Ying Xiang, and Pingping Fang
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biology ,General transcription factor ,RNA polymerase II ,Promoter ,DNA ,Ligands ,G-quadruplex ,Chromatin ,Cell biology ,G-Quadruplexes ,chemistry.chemical_compound ,chemistry ,Genetics ,biology.protein ,Transcriptional regulation ,Epigenetics ,Promoter Regions, Genetic ,Transcription Initiation, Genetic ,Genetics (clinical) - Abstract
G-quadruplexes (G4s) are noncanonical DNA secondary structures formed through the self-association of guanines, and G4s are distributed widely across the genome. G4 participates in multiple biological processes including gene transcription, and G4-targeted ligands serve as potential therapeutic agents for DNA-targeted therapies. However, genome-wide studies of the exact roles of G4s in transcriptional regulation are still lacking. Here, we establish a sensitive G4-CUT&Tag method for genome-wide profiling of native G4s with high resolution and specificity. We find that native G4 signals are cell type–specific and are associated with transcriptional regulatory elements carrying active epigenetic modifications. Drug-induced promoter-proximal RNA polymerase II pausing promotes nearby G4 formation. In contrast, G4 stabilization by G4-targeted ligands globally reduces RNA polymerase II occupancy at gene promoters as well as nascent RNA synthesis. Moreover, ligand-induced G4 stabilization modulates chromatin states and impedes transcription initiation via inhibition of general transcription factors loading to promoters. Together, our study reveals a reciprocal genome-wide regulation between native G4 dynamics and gene transcription, which will deepen our understanding of G4 biology toward therapeutically targeting G4s in human diseases.
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- 2021
8. Pinus leptokrempfii, an Oligocene Relative of the Flat-Needled Pine PINUS krempfii (Pinaceae) from China: Implications for Paleogeographic Origin
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Ashalata D'Rozario, Li Wang, Zhe-Kun Zhou, Jian Huang, Jian-Wei Zhang, and Xiao-Qing Liang
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%22">Pinus ,Pinaceae ,Geographic origin ,Pinus krempfii ,Botany ,East Asia ,Plant Science ,Biology ,China ,biology.organism_classification ,Ecology, Evolution, Behavior and Systematics - Abstract
Premise of research. The geographic origin of Pinus krempfii Lecomte, an unusual pine endemic to Vietnam, is unknown, as are the fossil relatives of this species. Its affinity and classification ar...
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- 2021
9. Lactobacillus rhamnosus confers protection against colorectal cancer in rats
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Jian Huang, Qinglian Zhong, Dan Wang, Anye Zhang, and Qun Huang
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medicine.medical_specialty ,biology ,business.industry ,Angiogenesis ,Colorectal cancer ,Pharmaceutical Science ,medicine.disease ,biology.organism_classification ,Nitric oxide synthase ,Blot ,Vascular endothelial growth factor ,chemistry.chemical_compound ,Endocrinology ,Real-time polymerase chain reaction ,Mechanism of action ,Lactobacillus rhamnosus ,chemistry ,Internal medicine ,biology.protein ,Medicine ,Pharmacology (medical) ,medicine.symptom ,business - Abstract
Purpose: To investigate the protective effect and mechanism of action of Lactobacillus rhamnosus against colorectal cancer (CRC). Methods: A total of 40 healthy female Sprague Dawley rats weighing 100 – 140 g (mean weight = 120 ± 20 g) were used for this study. The rats were randomly assigned to four groups of 10 rats each: normal control group, L. rhamnosus group; 1, 2-dimethylhydrazine (DMH) group and treatment group. Rats in L. rhamnosus group were inoculated with L. rhamnosus (1 x 108 CFU/mL) orally for 20 weeks, while rats in DMH group received 35 mg DMH/kg /week intraperitoneally for 10 weeks for induction of CRC. Treatment group rats received 35 mg DMH/kg bwt intraperitoneally for 10 weeks for induction of CRC, and were treated with L. rhamnosus (1 x 108 CFU/mL) orally for 20 weeks. After 20 weeks, the rats were euthanized using ether anesthesia. Expressions of inflammatory, angiogenesis and proapoptotic genes were determined using Western blotting and real-time quantitative polymerase chain reaction (qRT-PCR). Results: Treatment with L. rhamnosus significantly reduced the incidence of CRC in the rats (p < 0.05). The incidence of multiple tumors in the treatment group was also significantly reduced, when compared to DMH group (p < 0.05). The protein expressions of inducible nitric oxide synthase (iNOS), tumor necrosis factor α (TNF-α), nuclear factor kappa-light-chain-enhancer of activated B cells (NF-kB), cyclooxygenase-2 (COX-2), bcl-2 and vascular endothelial growth factor α (VEGF-α) were significantly upregulated in DMH group, when compared with normal control group (p < 0.05). However, treatment with L. rhamnosus significantly down-regulated the expressions of these proteins (p < 0.05). DMH treatment also significantly upregulated the expressions of iNOS, TNF-α, VEGF-α, NF-kB, β-catenin and bax genes (p < 0.05). However, L. rhamnosus significantly reversed the effects of DMH on the expression levels of these genes (p < 0.05). Conclusion: These results show that L. rhamnosus prevents CRC via suppression of expressions of inflammatory and angiogenesis genes, and upregulation of apoptotic gene expression.
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- 2021
10. circEHBP1 promotes lymphangiogenesis and lymphatic metastasis of bladder cancer via miR-130a-3p/TGFβR1/VEGF-D signaling
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Bowen Gao, Jian Huang, Changhao Chen, Jiang Zhu, Yue Zhao, Zhihua Li, Hanhao Zheng, Yuming Luo, Yuting Li, Le Ai, Hao Huang, and Yao Kong
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Male ,Receptor, Transforming Growth Factor-beta Type I ,Vascular Endothelial Growth Factor D ,Mice ,03 medical and health sciences ,0302 clinical medicine ,Downregulation and upregulation ,Cell Line, Tumor ,Drug Discovery ,Genetics ,Animals ,Humans ,Medicine ,Secretion ,Lymphangiogenesis ,Receptor ,3' Untranslated Regions ,Molecular Biology ,Neoplasm Staging ,030304 developmental biology ,Pharmacology ,0303 health sciences ,Bladder cancer ,biology ,business.industry ,RNA, Circular ,Transforming growth factor beta ,medicine.disease ,Up-Regulation ,Gene Expression Regulation, Neoplastic ,MicroRNAs ,Urinary Bladder Neoplasms ,Vascular endothelial growth factor C ,Lymphatic Metastasis ,030220 oncology & carcinogenesis ,Cancer research ,biology.protein ,Molecular Medicine ,Female ,Signal transduction ,business ,Neoplasm Transplantation - Abstract
Lymphatic metastasis constitutes a leading cause of recurrence and mortality in bladder cancer. Accumulating evidence indicates that lymphangiogenesis is indispensable to trigger lymphatic metastasis. However, the specific mechanism is poorly understood. In the present study, we revealed a pathway involved in lymphatic metastasis of bladder cancer, in which a circular RNA (circRNA) facilitated lymphangiogenesis in a vascular endothelial growth factor C (VEGF-C)-independent manner. Novel circRNA circEHBP1 was markedly upregulated in bladder cancer and correlated positively with lymphatic metastasis and poor prognosis of patients with bladder cancer. circEHBP1 upregulated transforming growth factor beta receptor 1 (TGFBR1) expression through physically binding to miR-130a-3p and antagonizing the suppression effect of miR-130a-3p on the 3' UTR region of TGFBR1. Subsequently, circEHBP1-mediated TGFβR1 overexpression activated the TGF-β/SMAD3 signaling pathway, thereby promoting the secretion of VEGF-D and driving lymphangiogenesis and lymphatic metastasis in bladder cancer. Importantly, administration of VEGF-D neutralizing antibodies remarkably blocked circEHBP1-induced lymphangiogenesis and lymphatic metastasis in vivo. Our findings highlighted that the circEHBP1/miR-130a-3p/TGFβR1/VEGF-D axis contributes to lymphangiogenesis and lymphatic metastasis of bladder cancer independent of VEGF-C, which might lead to the development of circEHBP1 as a potential biomarker and promising therapeutic target for lymphatic metastasis in bladder cancer.
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- 2021
11. Early Oligocene Itea (Iteaceae) leaves from East Asia and their biogeographic implications
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Shi-Tao Zhang, Tao Su, Jian Huang, and Yimin Tian
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0106 biological sciences ,Flora ,Itea ,QH301-705.5 ,Biogeography ,Plant Science ,Maianthemum ,010603 evolutionary biology ,01 natural sciences ,East Asia ,Biology (General) ,Ecology, Evolution, Behavior and Systematics ,biology ,Ecology ,Leaf fossil ,Botany ,Oligocene ,biology.organism_classification ,Iteaceae ,Polyneura ,Geography ,Southwestern China ,QK1-989 ,Paleogene ,010606 plant biology & botany - Abstract
Compressed materials of fossil foliage described here as Itea polyneura sp. nov. (Iteaceae) were collected from the Oligocene of Wenshan, Yunnan Province, southwestern China. The identification is based on the following characters: eucamptodromous secondary veins, strict scalariform tertiary veins, irregular tooth with setaceous apex. The leaf morphology of all modern and fossil species was compared with the new species from Wenshan and show that I. polyneura is most similar to the extant East Asian species Itea omeiensis, which inhabits subtropical forests of southern China. This discovery represents the first unambiguous leaf fossil record of Itea in East Asia. Together with other species in the Wenshan flora and evidence from several other flora in southern China, these findings demonstrate that Itea from East Asia arose with the Paleogene modernization. Copyright (C) 2020 Kunming Institute of Botany, Chinese Academy of Sciences. Publishing services by Elsevier B.V. on behalf of KeAi Communications Co., Ltd.
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- 2021
12. Duodenal adenocarcinoma with skin metastasis as initial manifestation: A case report
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Cuiping Zheng, Jian Huang, Yanyan Dai, Yixiao Fu, and Shenghao Wu
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medicine.medical_specialty ,QH301-705.5 ,Ecchymosis ,duodenal adenocarcinoma ,Physical examination ,Traditional Chinese medicine ,Biology ,Tegafur ,General Biochemistry, Genetics and Molecular Biology ,Metastasis ,03 medical and health sciences ,0302 clinical medicine ,medicine ,case report ,cutaneous metastasis ,Biology (General) ,General Immunology and Microbiology ,medicine.diagnostic_test ,integumentary system ,General Neuroscience ,skin metastasis ,medicine.disease ,Trunk ,030220 oncology & carcinogenesis ,Skin biopsy ,030211 gastroenterology & hepatology ,Duodenal adenocarcinoma ,Radiology ,medicine.symptom ,General Agricultural and Biological Sciences ,medicine.drug - Abstract
Background Duodenal adenocarcinoma (DA) with skin metastasis as initial manifestation is clinically rare. In this study, we report a rare case of skin metastasis of DA. Case presentation An 84-year-old male patient developed multiple ecchymoses on the trunk and lower extremities. Physical examination showed that the ecchymosis was dark red and had a hard texture, but showed no bulging, rupture, or tenderness. The skin biopsy implied skin metastatic adenocarcinoma. After an endoscopic duodenal biopsy, the patient was finally diagnosed with DA with skin metastasis. The patient received two courses of oral treatment of Tegafur (40 mg, bid d1–d14). However, the patient stopped taking Tegafur because of its poor effect and received Chinese medicine as a replacement treatment. Unfortunately, he was lost to follow-up. Conclusions Early diagnosis of DA metastasis is of significant importance as prognosis of these patients is poor.
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- 2021
13. Recurrent undifferentiated embryonal sarcoma of the liver in adult patient treated by pembrolizumab: A case report
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Jin-Yan Zhao, Naijian Ge, Jian Huang, Xiaohe Yu, and Yefa Yang
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Programmed cell death protein 1 ,Pathology ,medicine.medical_specialty ,biology ,Tumor mutation burden ,business.industry ,General Medicine ,Pembrolizumab ,03 medical and health sciences ,Undifferentiated embryonal sarcoma of the liver ,Immunohistology ,0302 clinical medicine ,030220 oncology & carcinogenesis ,Programmed cell death 1 ,Case report ,biology.protein ,medicine ,Undifferentiated (Embryonal) Sarcoma ,030211 gastroenterology & hepatology ,business - Abstract
BACKGROUND Undifferentiated embryonal sarcoma of the liver (UESL) is a neoplasm that rarely develops in adults. The main treatments for UESL are upfront gross total surgical resection and adjuvant multiagent chemotherapy. Here, we report a case of recurrent UESL in an adult treated with pembrolizumab and discuss a method to identify proper candidates for antibody of programmed cell death protein 1 (anti-PD-1) treatment. CASE SUMMARY A 69-year-old woman was admitted for abdominal pain that developed for 1 wk. Computed tomography showed a 16 cm mass in the right lobe of the liver. Right hemihepatectomy and lymphadenectomy were performed, and histological diagnosis was UESL. Six months later, the patient suffered from painless obstructive jaundice, and positron emission tomography-computed tomography revealed multiple metastases. Then, percutaneous transhepatic cholangial drainage was applied to reduce jaundice, and radiofrequency ablation was used to control the lesion near the hepatic hilum. However, the patient suffered from a serious fever caused by the tumor. The patient received treatment with pembrolizumab, and the prescribed dosage was 2 mg/kg every 3 wk. After the seventh dose, positron emission tomography-computed tomography revealed that the multiple metastases had nearly disappeared. Radiologic exam was used to evaluate the disease state, and no new lesions were found. Next-generation sequencing and immunohistology were applied to determine the reason why the patient had such a favorable response to pembrolizumab. Tumor mutation burden, microsatellite instability, and programmed death ligand 1 expression can be combined to predict the effect of PD-1 antibodies. When every one of these biomarkers are detected in a tumor patient, the patient may be a proper candidate for PD-1 antibodies. CONCLUSION Anti-PD-1 treatment for tumors needs further research to identify indications and proper biomarkers.
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- 2021
14. LincRNA‐EPS alleviates severe acute pancreatitis by suppressing HMGB1‐triggered inflammation in pancreatic macrophages
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Dapei Li, Jingfei Zhu, Chaohao Huang, Yuepeng Jin, Siying Liu, Feng Ma, Li-Qiong Sun, Shengchuan Chen, Haiping Yao, Gang Chen, Yanghua Qin, Jian Huang, Tan Zhang, Mengtao Zhou, and Qiyu Zhang
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Taurocholic Acid ,0301 basic medicine ,Necrosis ,Immunology ,Inflammation ,HMGB1 ,Severity of Illness Index ,Mice ,03 medical and health sciences ,0302 clinical medicine ,Animals ,Humans ,Immunology and Allergy ,Medicine ,Molecular Targeted Therapy ,HMGB1 Protein ,Pancreas ,Letter to the Editor ,Mice, Knockout ,biology ,business.industry ,Macrophages ,NF-kappa B ,medicine.disease ,Mice, Inbred C57BL ,Systemic inflammatory response syndrome ,Disease Models, Animal ,CXCL2 ,HEK293 Cells ,030104 developmental biology ,medicine.anatomical_structure ,Pancreatitis ,biology.protein ,Cancer research ,Acute pancreatitis ,RNA, Long Noncoding ,Inflammation Mediators ,medicine.symptom ,business ,Multiple organ dysfunction syndrome ,Ceruletide ,030215 immunology - Abstract
Acute pancreatitis (AP), an inflammatory disorder of the pancreas with a high hospitalization rate, frequently leads to systemic inflammatory response syndrome (SIRS) and multiple organ dysfunction syndrome (MODS). However, therapeutic targets for effective treatment and early intervention of AP are still urgently required to be identified. Here, we have observed that the expression of pancreatic lincRNA-EPS, a long intergenic non-coding RNA, is dynamically changed during both caerulein-induced AP (Cer-AP) and sodium taurocholate-induced severe AP (NaTc-SAP). The expression pattern of lincRNA-EPS is negatively correlated with the typical inflammatory genes such as IL-6, IL-1β, CXCL1, and CXCL2. Further studies indicate that knockout of lincRNA-EPS aggravates the pathological symptoms of AP including more induction of serum amylase and lipase, severe edema, inflammatory cells infiltration and acinar necrosis in both experimental AP mouse models. Besides these intrapancreatic effects, lincRNA-EPS also protects against tissue damages in the extra-pancreatic organs such as lung, liver, and gut in the NaTc-SAP mouse model. In addition, we have observed more serum pro-inflammatory cytokines TNF-α and IL-6 in the lincRNA-EPS-/- NaTc-SAP mice and more extracellular HMGB1 around injured acinar cells in the pancreas from lincRNA-EPS-/- NaTc-SAP mice, compared with their respective controls. Pharmacological inhibition of NF- κ B activity by BAY11-7082 significantly abolishes the suppressive effect of lincRNA-EPS on TLR4 ligand-induced inflammatory genes in macrophages. Our study has described a protective role of lincRNA-EPS in alleviating AP and SAP, outlined a novel pathway that lincRNA-EPS suppresses HMGB1-NF- κ B-dependent inflammatory response in pancreatic macrophages and provided a potential therapeutic target for SAP.
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- 2021
15. WD repeat domain 5 promotes chemoresistance and Programmed Death-Ligand 1 expression in prostate cancer
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Qianghua Zhou, Jingtong Zhang, Ruihui Xie, Liang Cheng, Xu Chen, Shengmeng Peng, Yangjie Zhang, Haixia He, Tianxin Lin, Ming Huang, Sen Liu, and Jian Huang
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0301 basic medicine ,Male ,Dihydropyridines ,WDR5 ,medicine.medical_treatment ,Survivin ,Medicine (miscellaneous) ,Apoptosis ,Cell Cycle Proteins ,B7-H1 Antigen ,Mice ,0302 clinical medicine ,E2F1 ,RNA, Small Interfering ,Pharmacology, Toxicology and Pharmaceutics (miscellaneous) ,Aurora Kinase A ,Prostate cancer ,biology ,Intracellular Signaling Peptides and Proteins ,chemoresistance ,Cell cycle ,Middle Aged ,DNA-Binding Proteins ,Gene Expression Regulation, Neoplastic ,Histone ,030220 oncology & carcinogenesis ,Gene Knockdown Techniques ,OICR-9429 ,PC-3 Cells ,medicine.drug ,Research Paper ,PD-L1 ,Mice, Nude ,Antineoplastic Agents ,Protein Serine-Threonine Kinases ,03 medical and health sciences ,Cell Line, Tumor ,Proto-Oncogene Proteins ,medicine ,Animals ,Humans ,Cyclin B1 ,Aged ,Cell Proliferation ,Cisplatin ,Biphenyl Compounds ,Prostatic Neoplasms ,Immunotherapy ,030104 developmental biology ,Drug Resistance, Neoplasm ,Cancer research ,biology.protein ,H3K4me3 ,Tumor Escape ,Chromatin immunoprecipitation ,E2F1 Transcription Factor ,Neoplasm Transplantation - Abstract
Purpose: Advanced prostate cancer (PCa) has limited treatment regimens and shows low response to chemotherapy and immunotherapy, leading to poor prognosis. Histone modification is a vital mechanism of gene expression and a promising therapy target. In this study, we characterized WD repeat domain 5 (WDR5), a regulator of histone modification, and explored its potential therapeutic value in PCa. Experimental Design: We characterized specific regulators of histone modification, based on TCGA data. The expression and clinical features of WDR5 were analyzed in two dependent cohorts. The functional role of WDR5 was further investigated with siRNA and OICR-9429, a small molecular antagonist of WDR5, in vitro and in vivo. The mechanism of WDR5 was explored by RNA-sequencing and chromatin immunoprecipitation (ChIP). Results: WDR5 was overexpressed in PCa and associated with advanced clinicopathological features, and predicted poor prognosis. Both inhibition of WDR5 by siRNA and OICR-9429 could reduce proliferation, and increase apoptosis and chemosensitivity to cisplatin in vitro and in vivo. Interestingly, targeting WDR5 by siRNA and OICR-9429 could block IFN-γ-induced PD-L1 expression in PCa cells. Mechanistically, we clarified that some cell cycle, anti-apoptosis, DNA repair and immune related genes, including AURKA, CCNB1, E2F1, PLK1, BIRC5, XRCC2 and PD-L1, were directly regulated by WDR5 and OICR-9429 in H3K4me3 and c-Myc dependent manner. Conclusions: These data revealed that targeting WDR5 suppressed proliferation, enhanced apoptosis, chemosensitivity to cisplatin and immunotherapy in PCa. Therefore, our findings provide insight into OICR-9429 is a multi-potency and promising therapy drug, which improves the antitumor effect of cisplatin or immunotherapy in PCa.
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- 2021
16. Development and validation of a PD-L1/PD-1/CD8 axis-based classifier to predict cancer survival of upper tract urothelial carcinoma after radical nephroureterectomy
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Weibin Hou, Jian Huang, Kun Xia, Meihua Yang, Meng Yang, Junyu Chen, Bo Wang, Tianxin Lin, Wenlong Zhong, Bingkun Zhou, Xiaofei Wang, and Hao Yu
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Adult ,Male ,Oncology ,Cancer Research ,medicine.medical_specialty ,medicine.medical_treatment ,Programmed Cell Death 1 Receptor ,Immunology ,Kaplan-Meier Estimate ,CD8-Positive T-Lymphocytes ,Nephroureterectomy ,B7-H1 Antigen ,Lymphocytes, Tumor-Infiltrating ,PD-L1 ,Internal medicine ,Biomarkers, Tumor ,medicine ,Humans ,Immunology and Allergy ,Stage (cooking) ,Survival rate ,Aged ,Neoplasm Staging ,Aged, 80 and over ,Urethral Neoplasms ,biology ,business.industry ,Proportional hazards model ,Cancer ,Immunotherapy ,Middle Aged ,Nomogram ,Prognosis ,medicine.disease ,Immunohistochemistry ,Nomograms ,ROC Curve ,biology.protein ,Female ,Disease Susceptibility ,business - Abstract
The expression status of programmed cell death-ligand 1/programmed cell death 1 (PD-L1/PD-1) and the infiltration of CD8+ T cells in tumor tissues are considered to be related to immunotherapy efficacy and patient prognosis. The purpose of this study is to clarify the prognostic value of the PD-L1/PD-1/CD8 axis, and to develop and validate a comprehensive scoring system based on multiple immune variables to predict cancer survival of upper tract urothelial carcinoma (UTUC) after radical nephroureterectomy (RNU). The immunohistochemical method was used to detect the expression of PD-L1, PD-1, and CD8 in cancer tissues of UTUC patients after RNU. Then, an immunoscore was constructed using the least absolute shrinkage and selection operator (LASSO) Cox regression model in the training cohort (n = 120), and it was verified in the validation cohort (n = 54). We found that infiltration of PD-L1+ immune cells (ICs), stromal PD-1+ tumor-infiltrating lymphocytes (TILs), and intratumoral CD8+ TILs was associated with poor overall survival (OS). The immunoscore based on the three immune variables further divided the patients into low- and high-risk groups, and there was a significant difference in the survival rate. A nomogram was constructed by combining tumor-node-metastasis (TNM) stage and immunoscore, and the area under the curve of the receiver-operating characteristic (ROC) (0.78) for predicting 5-year mortality was better than that of the TNM stage (0.70) and immunoscore (0.76). Our results show that the PD-L1/PD-1/CD8 axis-based classifier have potential clinical application to predict cancer survival of UTUC patients after RNU.
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- 2021
17. First macrofossil record of Icacinaceae in East Asia (early Oligocene, Wenshan Basin) and its ecological implications
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Tao Su, Cédric Del Rio, Jian Huang, Gregory W. Stull, Rémi Allemand, Zhe-Kun Zhou, and CAS Key Laboratory of Tropical Forest Ecology, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Mengla 666303, Yunnan, China
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0106 biological sciences ,010506 paleontology ,biology ,Macrofossil ,Plant Science ,[SDV.BV.BOT]Life Sciences [q-bio]/Vegetal Biology/Botanics ,15. Life on land ,Structural basin ,biology.organism_classification ,010603 evolutionary biology ,01 natural sciences ,Paleontology ,Geography ,Paleoclimatology ,East Asia ,Icacinaceae ,[SDU.STU.PG]Sciences of the Universe [physics]/Earth Sciences/Paleontology ,China ,ComputingMilieux_MISCELLANEOUS ,Ecology, Evolution, Behavior and Systematics ,0105 earth and related environmental sciences - Abstract
International audience
- Published
- 2021
18. Ginkgolide B promotes oligodendrocyte precursor cell differentiation and survival via Akt/CREB/bcl-2 signaling pathway after white matter lesion
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Zhirong Liu, Jing Wang, Jian Huang, Gang Zhao, Hao Zhu, Xingju Zou, Shilun Zuo, Weiwang Li, Jing Cheng, Ming Shi, and Jun Yang
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0301 basic medicine ,Ginkgolide-B ,Cell Survival ,White matter lesion ,Oligodendrocyte progenitor ,Apoptosis ,CREB ,General Biochemistry, Genetics and Molecular Biology ,Corpus Callosum ,Rats, Sprague-Dawley ,Lactones ,03 medical and health sciences ,0302 clinical medicine ,Memory ,Morris Water Maze Test ,Animals ,Cyclic AMP Response Element-Binding Protein ,Protein kinase B ,Myelin Sheath ,Original Research ,Oligodendrocyte Precursor Cells ,Cerebral hypoperfusion ,biology ,Chemistry ,Cell Differentiation ,Myelin Basic Protein ,White Matter ,Ginkgolides ,030104 developmental biology ,Proto-Oncogene Proteins c-bcl-2 ,Vacuoles ,Cancer research ,biology.protein ,Signal transduction ,Proto-Oncogene Proteins c-akt ,030217 neurology & neurosurgery ,Signal Transduction - Abstract
White matter lesion (WML) is caused by chronic cerebral hypoperfusion, which are usually associated with cognitive impairment. Evidence from recent studies has shown that ginkgolide B has a neuroprotective effect that could be beneficial for the treatment of ischemia; however, it is not clear whether ginkgolide B has a protective effect on WML. Our data show that ginkgolide B can promote the differentiation of oligodendrocyte precursor cell (OPC) into oligodendrocytes and promote oligodendrocyte survival following a WML. Ginkgolide B (5, 10, 20 mg/kg) or saline is administered intraperitoneally every day after WML. After 4 weeks, the data of Morris water maze suggested that rats’ memory and learning abilities were impaired, and the administration of ginkgolide B enhanced behavioral achievement. Also, treatment with ginkgolide B significantly attenuated this loss of myelin. Our result suggests that ginkgolide B promotes the differentiation of OPC into oligodendrocytes. We also found that ginkgolide B ameliorates oligodendrocytes apoptosis. Furthermore, ginkgolide B enhanced the expression of phosphorylated Akt and CREB. In conclusion, our data firstly show that ginkgolide B promotes oligodendrocyte genesis and oligodendrocyte myelin following a WML, possibly involving the Akt and CREB pathways.
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- 2021
19. Crosstalk between Macrophages, T Cells, and Iron Metabolism in Tumor Microenvironment
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Lesang Shen, Wuzhen Chen, Yongchuan Deng, Anwen Shao, Jian Huang, Haifei He, Xiaoyi Li, Cameron Lenahan, and Yunxiang Zhou
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Aging ,Cellular respiration ,Iron ,T-Lymphocytes ,medicine.medical_treatment ,Immunologic Surveillance ,Review Article ,Biology ,medicine.disease_cause ,Biochemistry ,Immune system ,Neoplasms ,Tumor Microenvironment ,medicine ,Animals ,Humans ,Immune Evasion ,Tumor microenvironment ,QH573-671 ,Macrophages ,Cell Biology ,General Medicine ,Immunotherapy ,Crosstalk (biology) ,Cancer cell ,Cancer research ,Cytology ,Carcinogenesis - Abstract
Leukocytes, including macrophages and T cells, represent key players in the human immune system, which plays a considerable role in the development and progression of tumors by immune surveillance or immune escape. Boosting the recruitment of leukocytes into the tumor microenvironment and promoting their antitumor responses have been hot areas of research in recent years. Although immunotherapy has manifested a certain level of success in some malignancies, the overall effectiveness is far from satisfactory. Iron is an essential trace element required in multiple, normal cellular processes, such as DNA synthesis and repair, cellular respiration, metabolism, and signaling, while dysregulated iron metabolism has been declared one of the metabolic hallmarks of malignant cancer cells. Furthermore, iron is implicated in the modulation of innate and adaptive immune responses, and elucidating the targeted regulation of iron metabolism may have the potential to benefit antitumor immunity and cancer treatment. In the present review, we briefly summarize the roles of leukocytes and iron metabolism in tumorigenesis, as well as their crosstalk in the tumor microenvironment. The combination of immunotherapy with targeted regulation of iron and iron-dependent regulated cell death (ferroptosis) may be a focus of future research.
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- 2021
20. A rare multiple primary sarcomatoid carcinoma (SCA) of small intestine harboring driver gene mutations: a case report and a literature review
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Shifu Chen, Xiang Ji, Xian Gong, Zhengqi Wen, Jian Huang, Guifeng Liu, Xinyi Liu, Wenliang Li, Lele Song, Yanqing Zhou, Ruize Zhou, Xiaoyu Tuo, Zhu Zhu, and Yaru Chen
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Cancer Research ,Gene mutation ,Biology ,medicine.disease ,Small intestine ,Sarcomatoid carcinoma (SCA) ,medicine.anatomical_structure ,Oncology ,KRAS ,medicine ,Cancer research ,case report ,Radiology, Nuclear Medicine and imaging ,TP53 ,Sarcomatoid carcinoma ,small intestine - Abstract
Primary sarcomatoid carcinoma (SCA) is a type of rare tumor consisting of both malignant epithelial and mesenchymal components. Only 32 cases of SCA of the small bowel have been reported in the literature to date. Due to its rarity and complexity, this cancer has not been genetically studied and its diagnosis and treatment remain difficult. Here we report a 54-year-old male underwent emergency surgical resection in the small intestine due to severe obstruction and was diagnosed with multiple SCA based on postoperative pathological examination. Over 100 polypoid tumors scattered along his whole jejunum and proximal ileum. Chemotherapy (IFO+Epirubicin) was performed after surgery while the patient died two months after the surgery due to severe malnutrition. Whole-exome sequencing was performed for the tumor tissue with normal tissue as the control. Important cancer-related gene mutations, including KRAS (c.37G>T, p.G13C), TP53 (c.871A>T, p.K291*), EGFR (c.1351C>T, p.R451C), and CDKN2A (c.104_138del, p.G35fs), were found among 286 nonsynonymous somatic mutations (SNV and Indel). Copy-number amplified genes mainly gathered in chromosome 6, 7, 16 and 20. Mutation clustering analysis showed that main genetic abnormalities included DNA methylation, DNA alkylation, cellular homeostasis, and shared similarities with melanoma, glioma, prostate cancer, bladder cancer, non-small cell lung cancer, and pancreatic cancer. In summary, the genomic features of the small intestine SCA were explored at whole-exome level for the first time, and over 200 somatic mutations were identified in the tumor tissue. Key tumor driver gene mutations were revealed, as well as several aberrant functional pathways. These results contribute to further understanding of the pathogenesis and molecular mechanism of this rare tumor.
- Published
- 2021
21. Insight into different host range of three planthoppers by transcriptomic and microbiomic analysis
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Hai-Jian Huang, Xin Wang, Xiao-Tian Yan, Juanjuan Chen, Chuan-Xi Zhang, Zhuang-Xin Ye, and Junmin Li
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Genetics ,biology ,Host (biology) ,food and beverages ,Oryza ,biology.organism_classification ,Fecundity ,Diet ,Gastrointestinal Microbiome ,Hemiptera ,Transcriptome ,Planthopper ,Species Specificity ,Insect Science ,Animals ,Host plants ,Brown planthopper ,Molecular Biology ,Relative species abundance ,Gene ,Triticum - Abstract
Brown planthopper (BPH), white-backed planthopper (WBPH) and small brown planthopper (SBPH), are the closely related rice pests that perform differentially on wheat plants. Using fecundity as a fitness measure, we found that SBPH well-adapted on wheat plants, followed by WBPH, while BPH had the worst performance. The transcriptomic responses of SBPH and BPH to wheat plants have been compared previously. To understand the different fitness mechanisms of three planthoppers, this study first investigated the transcriptomic responses of WBPH to rice and wheat plants. Genes involved in detoxification, transportation and proteasome were significantly enriched in WBPH in response to different diets. Moreover, comparative analysis demonstrated that most co-regulated genes in BPH and SBPH showed different expression changes; whereas most co-regulated genes in BPH and WBPH exhibited similar expression changes. Subsequently, this study also investigated the influences of host plants on the bacterial community of three planthoppers. The three planthoppers harboured distant diversity of bacterial communities. However, there was no dramatic change in bacterial diversity or relative abundance in planthoppers colonized on different hosts. This study illustrates generic and species-specific changes of three rice planthoppers in response to different plants, which deepen our understanding towards the host fitness for planthopper species.
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- 2021
22. The protective effect of gastrodin against the synergistic effect of HIV-Tat protein and METH on the blood–brain barrier via glucose transporter 1 and glucose transporter 3
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Dongxian Zhang, Liu Liu, Wenguang Wang, He Yongwang, Zhen Li, Chi-Kwan Leung, Xiaofeng Zeng, Juan Li, Zhang Ruilin, Jian Huang, Wang Shangwen, and Yuanyuan Li
- Subjects
Paper ,0303 health sciences ,biology ,business.industry ,Health, Toxicology and Mutagenesis ,Glucose transporter ,Human brain ,Meth ,Pharmacology ,Toxicology ,Blood–brain barrier ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,medicine.anatomical_structure ,chemistry ,biology.protein ,Medicine ,GLUT1 ,Gastrodin ,business ,030217 neurology & neurosurgery ,030304 developmental biology ,Evans Blue ,GLUT3 - Abstract
Many individuals infected with human immunodeficiency virus (HIV) are also afflicted with HIV-associated neurocognitive disorders (HANDs). Methamphetamine (METH) abuse puts HIV-1 patients at risk for HANDs because METH and HIV-1 proteins, such as trans-activator of transcription (Tat), can synergistically damage the blood–brain barrier (BBB). However, the underlying mechanism of METH- and HIV-Tat-induced BBB damage remains unclear. In this study, male adult tree shrews and human brain capillary endothelial cells were treated with HIV-Tat, METH, and gastrodin. We used western blotting to examine the expressions of glucose transporters (GLUT1 and GLUT3), tight junctions, and junctional adhesion molecule A (JAMA) and to evaluate the damage and detect Evans blue (EB) and fluorescein sodium in the brain to assess BBB permeability to study the effect of METH and the HIV-1 Tat protein on BBB function in vitro and in vivo. The results showed that the group treated with Tat and METH experienced a significant change at the ultrastructural level of the tree shrew cerebral cortex, decreased protein levels of occluding, claudin-5, Zonula occludens 1 (ZO1), and JAMA in vitro and in vivo, and increased levels of EB and fluorescein sodium in the tree shrew cerebral cortex. The protein levels of GLUT1 and GLUT3 was downregulated in patients with Tat- and METH-induced BBB damage. Pretreatment with gastrodin significantly increased the levels of EB and fluorescein sodium in the tree shrew cerebral cortex and increased the expressions of occluding, ZO1, JAMA, and GLUT1 and GLUT. These results indicate that gastrodin may offer a potential therapeutic option for patients with HANDs.
- Published
- 2021
23. Single point mutations can potentially enhance infectivity of SARS-CoV-2 revealed by in silico affinity maturation and SPR assay
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Lipeng Lai, Ning Guo, Chengyong Wu, Jian Huang, Ting Xue, Tianyuan Wang, Hong Liu, Yuxi Wang, Weikun Wu, and Yalun Li
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Infectivity ,0303 health sciences ,biology ,Chemistry ,General Chemical Engineering ,In silico ,030302 biochemistry & molecular biology ,Mutant ,General Chemistry ,Computational biology ,Virus ,Affinity maturation ,03 medical and health sciences ,biology.protein ,Potency ,Antibody ,Receptor ,030304 developmental biology - Abstract
The RBD (receptor binding domain) of the SARS-CoV-2 virus S (spike) protein mediates viral cell attachment and serves as a promising target for therapeutics development. Mutations on the S-RBD may alter its affinity to the cell receptor and affect the potency of vaccines and antibodies. Here we used an in silico approach to predict how mutations on RBD affect its binding affinity to hACE2 (human angiotensin-converting enzyme2). The effect of all single point mutations on the interface was predicted. SPR assay results show that 6 out of 9 selected mutations can strengthen binding affinity. Our prediction has reasonable agreement with the previous deep mutational scan results and recently reported mutants. Our work demonstrated the in silico method as a powerful tool to forecast more powerful virus mutants, which will significantly benefit the development of broadly neutralizing vaccine and antibody.
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- 2021
24. Two novel compounds from green walnut husks (Juglans mandshurica Maxim.)
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Libo Wang, Xing-Wen Wang, Chunli Gan, Ya-Ping Guo, Li-Yuan Qu, Shuang Ma, Yan-Bin Ren, Hong Yang, Jian Huang, and Jin-Hui Wang
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Juglans mandshurica ,biology ,Traditional medicine ,Phytochemical ,Chemistry ,Organic Chemistry ,Diarylheptanoid ,Plant Science ,biology.organism_classification ,Biochemistry ,Husk ,Diarylheptanoids ,Analytical Chemistry - Abstract
Phytochemical investigation on the ethanol extract of green walnut husks (Juglans mandshurica Maxim.) led to the isolation of two previously unknown compounds, including a macrolide compound (13S)-8-oxo-(9E, 11E)-8-oxo-octadeca-9,11-dien-13-olide (1) and a diarylheptanoid compound 1-(3'-methoxy-4'-hydroxyphenyl)-7-(3″,4″-dimethoxyphenyl)heptan-3-one (2), together with 19 known compounds. The structures of these 21 compounds were elucidated by extensive analyses of NMR and HR-MS data, and the basis of spectroscopic analysis.
- Published
- 2020
25. Fossil involucres of Ostrya (Betulaceae) from the early Oligocene of Yunnan and their biogeographic implications
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Teng-Xiang Wang, Tao Su, Zhe-Kun Zhou, Cédric Del Rio, Wen-Na Ding, Jian Huang, and CAS Key Laboratory of Tropical Forest Ecology, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Mengla 666303, Yunnan, China
- Subjects
Low altitude ,Betulaceae ,010506 paleontology ,Fossil Record ,biology ,Stratigraphy ,Paleontology ,[SDV.BV.BOT]Life Sciences [q-bio]/Vegetal Biology/Botanics ,Structural basin ,Ostrya ,010502 geochemistry & geophysics ,biology.organism_classification ,01 natural sciences ,Geography ,Reticulate ,Genus ,Distribution pattern ,[SDU.STU.PG]Sciences of the Universe [physics]/Earth Sciences/Paleontology ,ComputingMilieux_MISCELLANEOUS ,Ecology, Evolution, Behavior and Systematics ,0105 earth and related environmental sciences - Abstract
A new fossil occurrence of Ostrya (Betulaceae) is reported based on 14 involucre impressions from the lower Oligocene of Lohe Basin, Yunnan Province, Southwest China. They are characterized by their bladder-like shape with longitudinal veins and perpendicular or branched intercostal veins that form a reticulate venation. The discovery of these fossil involucres represents the earliest unequivocal fossil record of Ostrya in East Asia and the record at the lowest latitude. Its fossil history suggests that the modern distribution pattern of Ostrya might have been established since the early Oligocene, and that this genus has inhabited low altitude areas since then.
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- 2020
26. Neuroinflammation Induction and Alteration of Hippocampal Neurogenesis in Mice Following Developmental Exposure to Gossypol
- Author
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Yongji Wu, Jian Huang, Xuejun Chai, Cixia Li, Enhui Cui, Xiaoyan Zhu, Ziluo Chen, Jiarong Pan, Shanting Zhao, and Wentai Zhou
- Subjects
0301 basic medicine ,medicine.medical_specialty ,cognitive deficits ,AcademicSubjects/MED00415 ,Neurogenesis ,Hippocampal formation ,Endocrine Disruptors ,Regular Research Articles ,Hippocampus ,neuroinflammation ,03 medical and health sciences ,chemistry.chemical_compound ,Mice ,0302 clinical medicine ,Pregnancy ,Internal medicine ,medicine ,Animals ,Pharmacology (medical) ,Cognitive Dysfunction ,Progenitor cell ,Pharmacology ,biology ,Behavior, Animal ,AcademicSubjects/SCI01870 ,Dentate gyrus ,Gossypol ,hippocampal neurogenesis ,Brain development ,Neural stem cell ,Psychiatry and Mental health ,Disease Models, Animal ,030104 developmental biology ,Endocrinology ,chemistry ,Animals, Newborn ,Prenatal Exposure Delayed Effects ,Neuroinflammatory Diseases ,biology.protein ,Female ,NeuN ,Neural development ,030217 neurology & neurosurgery - Abstract
Background Neurogenesis in the neonatal period involves the proliferation and differentiation of neuronal stem/progenitor cells and the establishment of synaptic connections. This process plays a critical role in determining the normal development and maturation of the brain throughout life. Exposure to certain physical or chemical factors during the perinatal period can lead to many neuropathological defects that cause high cognitive dysfunction and are accompanied by abnormal hippocampal neurogenesis and plasticity. As an endocrine disruptor, gossypol is generally known to exert detrimental effects in animals exposed under experimental conditions. However, it is unclear whether gossypol affects neurogenesis in the hippocampal dentate gyrus during early developmental stages. Methods Pregnant Institute of Cancer Research mice were treated with gossypol at a daily dose of 0, 20, and 50 mg/kg body weight from embryonic day 6.5 to postnatal day (P) 21. The changes of hippocampal neurogenesis as well as potential mechanisms were investigated by 5-bromo-2-deoxyuridine labeling, behavioral tests, immunofluorescence, quantitative reverse transcription-polymerase chain reaction, and western-blot analyses. Results At P8, maternal gossypol exposure impaired neural stem cell proliferation in the dentate gyrus and decreased the number of newborn cells as a result of reduced proliferation of BLBP+ radial glial cells and Tbr2+ intermediate progenitor cells. At P21, the numbers of NeuN+ neurons and parvalbumin+ γ-aminobutyric acid-ergic interneurons were increased following 50 mg/kg gossypol exposure. In addition, gossypol induced hippocampal neuroinflammation, which may contribute to behavioral abnormalities and cognitive deficits and decrease synaptic plasticity. Conclusions Our findings suggest that developmental gossypol exposure affects hippocampal neurogenesis by targeting the proliferation and differentiation of neuronal stem/progenitor cells, cognitive functions, and neuroinflammation. The present data provide novel insights into the neurotoxic effects of gossypol on offspring.
- Published
- 2020
27. Electrochemical and Optical Biosensing Strategies for DNA Methylation Analysis
- Author
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Min Liu, Shasha Su, Fei Mo, Jian Huang, Jingrun Lu, Junsong Zheng, Shu Zhang, and Xi Chen
- Subjects
Biosensing Techniques ,02 engineering and technology ,Computational biology ,Biology ,010402 general chemistry ,medicine.disease_cause ,01 natural sciences ,Biochemistry ,Epigenesis, Genetic ,chemistry.chemical_compound ,Drug Discovery ,medicine ,Base sequence ,Epigenetics ,Pharmacology ,Organic Chemistry ,DNA ,DNA Methylation ,021001 nanoscience & nanotechnology ,0104 chemical sciences ,chemistry ,DNA methylation ,Molecular Medicine ,0210 nano-technology ,Carcinogenesis ,Genomic imprinting ,Biosensor ,Cytosine - Abstract
DNA methylation is considered as a crucial part of epigenetic modifications and a popular research topic in recent decades. It usually occurs with a methyl group adding to the fifth carbon atom of cytosine while the base sequence of DNA remains unchanged. DNA methylation has significant influences on maintaining cell functions, genetic imprinting, embryonic development and tumorigenesis procedures and hence the analysis of DNA methylation is of great medical significance. With the development of analytical techniques and further research on DNA methylation, numerous DNA methylation detection strategies based on biosensing technology have been developed to fulfill various study requirements. This article reviewed the development of electrochemistry and optical biosensing analysis of DNA methylation in recent years; in addition, we also reviewed some recent advances in the detection of DNA methylation using new techniques, such as nanopore biosensors, and highlighted the key technical and biological challenges involved in these methods. We hope this paper will provide useful information for the selection and establishment of analysis of DNA methylation.
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- 2020
28. Cross-talk between the gut microbiota and monocyte-like macrophages mediates an inflammatory response to promote colitis-associated tumourigenesis
- Author
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Yunke Wang, Mengyao Chen, Zhou Jiang, Junfeng Yan, Jun Pan, Jun Yan, Chunjing Xu, Yunben Yang, Xianguo Wu, Jian Huang, Zhigang Chen, Ying Yuan, Kai Song, Xiaoqian Li, Wanglan Xie, Zhen Wang, Lili Li, Shu Zheng, Chenghui Yang, and Fuming Qiu
- Subjects
0301 basic medicine ,colorectal cancer ,Inflammation ,Gut flora ,CCL2 ,Proinflammatory cytokine ,03 medical and health sciences ,0302 clinical medicine ,Immune system ,medicine ,Macrophage ,Gut Microbiota ,biology ,Monocyte ,Gastroenterology ,biology.organism_classification ,macrophages ,030104 developmental biology ,medicine.anatomical_structure ,030220 oncology & carcinogenesis ,Cancer research ,intestinal bacteria ,gut inflammation ,medicine.symptom ,Cell activation - Abstract
ObjectiveMacrophages are among the most abundant cells in the colon tumour microenvironment, and there is a close relationship among monocytes, macrophages and the gut microbiota. Alterations in the gut microbiota are involved in tumour development, but the underlying mechanisms remain unclear. We aim to elucidate the temporal changes in macrophage subsets and functions, and how these dynamics are regulated by microbial cues in the initiation of colitis-associated cancer.DesignA mouse model of colitis-associated tumourigenesis was established to determine macrophage dynamics. The role of monocyte-like macrophage (MLM) was confirmed by targeting its chemotaxis. The effects of the gut microbiota were assessed by antibiotic treatment and faecal microbiota transplantation.ResultsA selective increase in MLMs was observed in the initial stages of colitis-associated cancer, with an enhanced secretion of inflammatory cytokines. MLM accumulation was regulated by CCL2 expression of colonic epithelial cells, which was influenced by bacteria-derived lipopolysaccharide (LPS). LPS further stimulated interleukin 1β production from MLMs, inducing interleukin-17-producing T-helper cell activation to promote inflammation. These observations were also supported by altered microbial composition associated with human colitis and colorectal cancer, evolving transcriptional signature and immune response during human colitis-associated tumourigenesis.ConclusionsThe gut microbiota uses LPS as a trigger to regulate MLM accumulation in a chemokine-dependent manner and generate a precancerous inflammatory milieu to facilitate tumourigenesis.
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- 2020
29. Aaptodines A–D, Spiro Naphthyridine–Furooxazoloquinoline Hybrid Alkaloids from the Sponge Aaptos suberitoides
- Author
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Wenhan Lin, Hongli Jia, Pianpian Wang, Attila Mándi, Jian Huang, Wei Cheng, and Tibor Kurtán
- Subjects
Circular dichroism ,Carbon atom ,biology ,010405 organic chemistry ,Stereochemistry ,Chemistry ,Organic Chemistry ,Aaptos suberitoides ,010402 general chemistry ,biology.organism_classification ,01 natural sciences ,Biochemistry ,0104 chemical sciences ,Sponge ,Physical and Theoretical Chemistry - Abstract
LC-MS-oriented fractionation of the sponge Aaptos suberitoides resulted in the isolation of four heptacyclic alkaloids, aaptodines A-D (1-4), which contain 9,10-dihydrofuro[2,3-f][1,3]oxazolo[5,4-h]quinolone and 7,8-dihydrocyclopenta[de][1,6]naphthyridine subunits with a spiro carbon atom. The structures were determined on the basis of NMR spectroscopic and single-crystal X-ray diffraction data analysis aided by electronic circular dichroism calculations and Mosher's method. A biosynthetic pathway for the formation of aaptodines A-D is postulated. Aaptodine D exhibits potent inhibition against osteoclast formation.
- Published
- 2020
30. An IL6–Adenosine Positive Feedback Loop between CD73+ γδTregs and CAFs Promotes Tumor Progression in Human Breast Cancer
- Author
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Shimin Wang, Pu Cheng, Qiannan Ding, Xuan Shao, Lu Cheng, Jun Pan, Guoming Hu, Liming Huang, Zhou Jiang, and Jian Huang
- Subjects
0301 basic medicine ,Cancer Research ,Tumor microenvironment ,biology ,business.industry ,medicine.medical_treatment ,Immunology ,Immunosuppression ,Immunotherapy ,Adenosine ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,Immune system ,Tumor progression ,030220 oncology & carcinogenesis ,medicine ,Cancer research ,biology.protein ,skin and connective tissue diseases ,business ,STAT3 ,CD8 ,medicine.drug - Abstract
The tumor microenvironment induces immunosuppression via recruiting and expanding suppressive immune cells such as regulatory T cells (Treg) to promote cancer progression. In this study, we documented that tumor-infiltrating CD73+ γδTregs were the predominant Tregs in human breast cancer and exerted more potent immunosuppressive activity than CD4+ or CD8+ Tregs. We further demonstrated that cancer-associated fibroblast (CAF)–derived IL6, rather than TGFβ1, induced CD73+ γδTreg differentiation from paired normal breast tissues via the IL6/STAT3 pathway to produce more adenosine and become potent immunosuppressive T cells. CD73+ γδTregs could in turn promote IL6 secretion by CAFs through adenosine/A2BR/p38MAPK signaling, thereby forming an IL6–adenosine positive feedback loop. CD73+ γδTreg infiltration also impaired the tumoricidal functions of CD8+ T cells and significantly correlated with worse prognosis of patients. The data indicate that the IL6–adenosine loop between CD73+ γδTregs and CAFs is important to promote immunosuppression and tumor progression in human breast cancer, which may be critical for tumor immunotherapy.
- Published
- 2020
31. Chemical Fingerprint Analysis for Discovering Markers and Identifying Saussurea involucrata by HPLC Coupled with OPLS-DA
- Author
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Jian Huang, Qingdong Ma, Xiaoxiang Chen, Santai Bulemasi, Jin-Hui Wang, Lu Yang, Wang Hangyu, Ke Zhang, and Dahong Yao
- Subjects
Adulterant ,0303 health sciences ,QD71-142 ,Article Subject ,biology ,010405 organic chemistry ,General Chemical Engineering ,Lotus ,Computational biology ,biology.organism_classification ,01 natural sciences ,DNA barcoding ,High-performance liquid chromatography ,0104 chemical sciences ,Computer Science Applications ,Analytical Chemistry ,03 medical and health sciences ,Zaluzanin C ,Fingerprint ,Chinese pharmacopoeia ,Instrumentation ,030304 developmental biology ,Saussurea involucrata - Abstract
The quality control of Saussurea involucrata has been greatly improved by macroscopic and microscopic identification and chemical profiling described in Chinese Pharmacopoeia since 2005. However, these methods have their own limitations, e.g., their dependence on personal experience and expertise, and it is a huge challenge to identify closely related species that share similar or identical morphological characteristics and chemical profiles. A novel and generally accepted identification strategy is urgently needed as a complement to regulations for protecting the public health interests. In this work, a comprehensive chromatographic fingerprint method was developed and tested on 43 samples from four haplotypes of S. involucrata according to DNA barcoding. Three common patterns consisting of 20, 14, and 7 common peaks were generated by frequency filters of median, upper quartile, and 100%, respectively. Based on two formerly screened patterns, S. involucrata can be effectively identified from its five easily confused snow lotus species, including the most closely related plant (S. orgaadayi) in the orthogonal partial least-squares discriminant analysis (OPLS-DA) models. The model is supported by good R and Q coefficients. In addition, different haplotypes of S. involucrata can be discriminated in the OPLS-DA model using the 20 common peaks. Among them, peaks 9, 11, 16 (zaluzanin C), and 18 (dehydrocostus lactone) have been identified as fingerprint markers of S. involucrata via S-plots and VIP values (>1). Additionally, peaks 19 and 20 were identified as linolenic acid and linoleic acid with anti-inflammatory activity, and they were isolated from the herb for the first time. Collectively, the chromatographic fingerprint of S. involucrata can be an effective and integrated method for the identification of authentic herbs from adulterant species or related plants, and discrimination of its different haplotypes provides an objective and reliable tool for quality control.
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- 2020
32. Tsuga seed cones from the late Paleogene of southwestern China and their biogeographical and paleoenvironmental implications
- Author
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Qin Leng, Tao Su, Jian Huang, Zhe-Kun Zhou, and Meng-Xiao Wu
- Subjects
010506 paleontology ,Plateau ,geography.geographical_feature_category ,biology ,Stratigraphy ,Paleontology ,Macrofossil ,Structural basin ,010502 geochemistry & geophysics ,biology.organism_classification ,01 natural sciences ,Tsuga ,Geography ,Genus ,Lacustrine deposits ,China ,Paleogene ,Ecology, Evolution, Behavior and Systematics ,0105 earth and related environmental sciences - Abstract
Six Tsuga ovuliferous/seed cone impression fossils were discovered from the late Eocene (34.6 ± 0.8 Ma) Lawula Formation in Mangkang County, eastern Tibet and the early Oligocene (32 ± 1 Ma) lacustrine deposits in Luhe Basin, Nanhua County, Yunnan Province. These two fossil sites are both located in southwestern China, ∼800 km apart from each other. These fossils represent the oldest records of this genus in southwestern China, even earliest reliable macrofossil records of this genus in the world. These well-preserved seed cones provide sufficient materials for the establishment of Tsuga asiatica Wu et Zhou n. sp. to accommodate five specimens, leaving one to be assigned to T. cf. dumosa Eichler (cf. Wu et Zhou). Both qualitative and quantitative comparisons with other cone fossils and cones of all living species of the genus suggested that T. asiatica shares more similarities with one of the basal species of the genus T. heterophylla. The discovery of late Paleogene macrofossil records of Tsuga in southwestern China supports the previous hypothesis of the early disposal routes of this coniferous genus predicted by phylogenetic analysis. The elevation ranges and the climate requirements of living species that are closely related to our fossils suggest that the southeastern edge of the Qinghai-Tibetan Plateau should be much warmer, and wetter in late Paleogene than nowadays.
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- 2020
33. Identification of salivary proteins in the whitefly Bemisia tabaci by transcriptomic and LC–MS/MS analyses
- Author
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Chuan-Xi Zhang, Gang Lu, Zhuang-Xin Ye, Hai-Jian Huang, Jianping Chen, and Junmin Li
- Subjects
0106 biological sciences ,0301 basic medicine ,Saliva ,Whitefly ,Biology ,01 natural sciences ,General Biochemistry, Genetics and Molecular Biology ,Microbiology ,Hemiptera ,Transcriptome ,03 medical and health sciences ,Tandem Mass Spectrometry ,Plant defense against herbivory ,Animals ,Salivary Proteins and Peptides ,Gene ,Ecology, Evolution, Behavior and Systematics ,Effector ,biology.organism_classification ,010602 entomology ,030104 developmental biology ,Insect Science ,Proteome ,Insect Proteins ,Arthropod ,Agronomy and Crop Science ,Chromatography, Liquid - Abstract
The whitefly Bemisia tabaci is a notorious agricultural pest of many crops worldwide. Although it is thought that B. tabaci secretes saliva into the host plant to counter plant defenses, knowledge on the whitefly salivary proteome is limited. Here, we characterized the gene/protein repertoires of B. tabaci salivary glands and secreted saliva by transcriptomic and liquid chromatography tandem mass spectroscopy analyses. A total of 698 salivary gland-enriched unigenes and 171 salivary proteins were identified. Comparative analysis between the B. tabaci salivary proteins and those of different arthropod species revealed numerous similarities in proteins associated with binding, hydrolysis, and oxidation-reduction, which demonstrates a degree of conservation across herbivorous saliva. There were 74 proteins only identified in B. tabaci saliva, of which 34 were B. tabaci-specific. In addition, 13 salivary proteins, of which 11 were B. tabaci-specific, were differentially regulated when B. tabaci fed on different hosts. Our results provide a good resource for future functional studies of whitefly salivary effectors, and might be useful in pest management.
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- 2020
34. Recent Advancement in Predicting Subcellular Localization of Mycobacterial Protein with Machine Learning Methods
- Author
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Zheng-Xing Guan, Zi-Mei Zhang, Jian Huang, Wuritu Yang, Hao Lin, Shi-Hao Li, and Dan Zhang
- Subjects
0303 health sciences ,Protein function ,Tuberculosis ,Computational Biology ,Feature selection ,Mycobacterium tuberculosis ,Computational biology ,Biology ,medicine.disease ,Subcellular localization ,biology.organism_classification ,Machine Learning ,03 medical and health sciences ,Prediction algorithms ,0302 clinical medicine ,Data sequences ,Bacterial Proteins ,030220 oncology & carcinogenesis ,Drug Discovery ,medicine ,030304 developmental biology - Abstract
Mycobacterium tuberculosis (MTB) can cause the terrible tuberculosis (TB), which is reported as one of the most dreadful epidemics. Although many biochemical molecular drugs have been developed to cope with this disease, the drug resistance—especially the multidrug-resistant (MDR) and extensively drug-resistance (XDR)—poses a huge threat to the treatment. However, traditional biochemical experimental method to tackle TB is time-consuming and costly. Benefited by the appearance of the enormous genomic and proteomic sequence data, TB can be treated via sequence-based biological computational approach-bioinformatics. Studies on predicting subcellular localization of mycobacterial protein (MBP) with high precision and efficiency may help figure out the biological function of these proteins and then provide useful insights for protein function annotation as well as drug design. In this review, we reported the progress that has been made in computational prediction of subcellular localization of MBP including the following aspects: 1) Construction of benchmark datasets. 2) Methods of feature extraction. 3) Techniques of feature selection. 4) Application of several published prediction algorithms. 5) The published results. 6) The further study on prediction of subcellular localization of MBP.
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- 2020
35. The species of the varius group of Coccophagus (Hymenoptera: Aphelinidae) from China, with description of a new species, DNA sequence data, and a new country record
- Author
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Jian Huang, Andrew Polaszek, Li Yue Xu, Yu Si, Stefan Schmidt, Zhu Hong Wang, and Hui Geng
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0106 biological sciences ,biology ,010607 zoology ,Zoology ,Hymenoptera ,biology.organism_classification ,010603 evolutionary biology ,01 natural sciences ,DNA sequencing ,Parasitoid ,Aphelinidae ,Group (periodic table) ,Coccophagus ,China ,Ecology, Evolution, Behavior and Systematics ,Coccidae - Abstract
The Chinese species of the varius group of Coccophagus Westwood (Hymenoptera: Aphelinidae) are reviewed, including described species Coccophagus albifuniculatus (Huang), C. anchoroides (Huang), C. ...
- Published
- 2020
36. New cytotoxic 4-alkyl-dihydroxyfuran coumarins from Mesua ferrea
- Author
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Jian Huang, Qin Li, Ya-Ping Guo, Wang Shuyun, Wei Xiao, Jin-Hui Wang, and Yu-Xin Wang
- Subjects
chemistry.chemical_classification ,Circular dichroism ,biology ,010405 organic chemistry ,Stereochemistry ,Mesua ferrea ,Plant Science ,Molecule docking ,biology.organism_classification ,01 natural sciences ,Biochemistry ,Calculation methods ,0104 chemical sciences ,010404 medicinal & biomolecular chemistry ,chemistry ,Hepg2 cells ,Cytotoxic T cell ,Agronomy and Crop Science ,IC50 ,Alkyl ,Biotechnology - Abstract
Four new 4-alkyl-dihydroxyfuran coumarins, Mesuaferols D–F and iso-Mesuaferol F (1–4) were isolated from the flowering buds of Mesua ferrea. The chemical structures of these compounds were confirmed by the extensive analyses of NMR, UV, IR and HR-ESI-MS methods, the absolute configurations were established on the basis of the Mosher’s method, electron circular dichroism (ECD) measurement and theoretical calculation methods. The inhibitory activities of the isolates were evaluated on MDA-MB-231, MCF-7 and HepG2 cancer cell lines. All compounds exhibited potent activity against MCF-7 with IC50 as 26.68 μM, 37.75 μM, 20.53 μM and 33.43 μM respectively, while almost all compounds showed moderate cytotoxic activities against MDA-MB-231 and HepG2 cell lines. The results of prediction potential targets and molecule docking revealed that Mesuaferol D showed the most binding potential against mTOR.
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- 2020
37. Comparative analysis of diet-associated responses in two rice planthopper species
- Author
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Hai-Jian Huang, Jia-Rong Cui, and Xiao-Yue Hong
- Subjects
0106 biological sciences ,Diet-associated responses ,Comparative transcriptome ,lcsh:QH426-470 ,media_common.quotation_subject ,lcsh:Biotechnology ,Insect ,Biology ,01 natural sciences ,Host Specificity ,Transcriptome ,Hemiptera ,03 medical and health sciences ,Planthopper ,lcsh:TP248.13-248.65 ,Genetics ,Laodelphax striatellus ,Animals ,Nilaparvata lugens ,Gene ,Triticum ,Host adaptation ,030304 developmental biology ,media_common ,0303 health sciences ,Host (biology) ,fungi ,food and beverages ,Oryza ,biology.organism_classification ,Diet ,lcsh:Genetics ,Brown planthopper ,Delphacidae ,010606 plant biology & botany ,Biotechnology ,Research Article - Abstract
Background Host adaptation is the primary determinant of insect diversification. However, knowledge of different host ranges in closely related species remains scarce. The brown planthopper (Nilaparvata lugens, BPH) and the small brown planthopper (Laodelphax striatellus, SBPH) are the most destructive insect pests within the family Delphacidae. These two species differ in their host range (SBPH can well colonize rice and wheat plants, whereas BPH survives on only rice plants), but the underlying mechanism of this difference remains unknown. High-throughput sequencing provides a powerful approach for analyzing the association between changes in gene expression and the physiological responses of insects. Therefore, gut transcriptomes were performed to elucidate the genes associated with host adaptation in planthoppers. The comparative analysis of planthopper responses to different diets will improve our knowledge of host adaptation regarding herbivorous insects. Results In the present study, we analyzed the change in gene expression of SBPHs that were transferred from rice plants to wheat plants over the short term (rSBPH vs tSBPH) or were colonized on wheat plants over the long term (rSBPH vs wSBPH). The results showed that the majority of differentially expressed genes in SBPH showed similar changes in expression for short-term transfer and long-term colonization. Based on a comparative analysis of BPH and SBPH after transfer, the genes associated with sugar transporters and heat-shock proteins showed similar variation. However, most of the genes were differentially regulated between the two species. The detoxification-related genes were upregulated in SBPH after transfer from the rice plants to the wheat plants, but these genes were downregulated in BPH under the same conditions. In contrast, ribosomal-related genes were downregulated in SBPH after transfer, but these genes were upregulated in BPH under the same conditions. Conclusions The results of this study provide evidence that host plants played a dominant role in shaping gene expression and that the low fitness of BPH on wheat plants might be determined within 24 h after transfer. This study deepens our understanding of different host ranges for the two planthopper species, which may provide a potential strategy for pest management.
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- 2020
38. Similarities and spatial variations of bacterial and fungal communities in field rice planthopper (Hemiptera: Delphacidae) populations
- Author
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Xiao-Li Bing, Xiao-Yue Hong, Dian-Shu Zhao, Chang‐Wu Peng, and Hai-Jian Huang
- Subjects
Male ,0106 biological sciences ,0301 basic medicine ,China ,Zoology ,Environment ,01 natural sciences ,General Biochemistry, Genetics and Molecular Biology ,Hemiptera ,03 medical and health sciences ,Planthopper ,Sex Factors ,Species Specificity ,RNA, Ribosomal, 16S ,Animals ,Tissue Distribution ,Phylogeny ,Ecology, Evolution, Behavior and Systematics ,Bacteria ,biology ,Host (biology) ,Microbiota ,fungi ,Pantoea ,Fungi ,food and beverages ,RNA, Fungal ,biology.organism_classification ,Alternaria ,RNA, Bacterial ,010602 entomology ,030104 developmental biology ,Insect Science ,Curvularia ,Female ,Wolbachia ,Delphacidae ,Agronomy and Crop Science ,Mycobiome - Abstract
Rice planthoppers are notorious plant sap-feeding pests which cause serious damage. While several microbes in rice planthoppers have been broadly characterized, the abundance and diversity of bacteria and fungi in field planthoppers are largely unknown. This study investigated the bacterial and fungal community compositions of Chinese wild rice planthoppers Laodelphax striatellus and Sogatella furcifera using parallel 16S rRNA gene amplicon and internal transcribed space region sequencing. The bacteria varied significantly between the species and were partitioned significantly by sex, tissues and host environments in each species. The majority of bacteria were affiliated with the genera Wolbachia, Cardinium, Rickettsia and Pantoea. The abundance of Wolbachia was negatively correlated with that of Cardinium in both planthopper species. Compared with bacteria, the abundance and diversity of fungi did not differ between sexes but both were enriched in the gut. The bacterial community as a whole showed no significant correlation with the fungal community. The majority of fungi were related to Sarocladium, Alternaria, Malassezia, Aspergillus and Curvularia. A phylogenetic analysis revealed that these fungi were closely related to botanic symbionts or pathogens. Our results provide novel insights into the bacteria and fungi of rice planthoppers.
- Published
- 2020
39. miRNA Expression Profile in the N2 Phenotype Neutrophils of Colorectal Cancer and Screen of Putative Key miRNAs
- Author
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Ning Xu, Wenliang Li, Jian Huang, Xuan Liu, Liang Wang, Jian-Hua Zhang, Zheng-Qi Wen, and Jun Yang
- Subjects
0301 basic medicine ,Colorectal cancer ,Biology ,medicine.disease ,Phenotype ,Microvesicles ,Metastasis ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,Oncology ,030220 oncology & carcinogenesis ,microRNA ,Cancer research ,medicine ,Immunohistochemistry ,DNA microarray ,KEGG - Abstract
Objective Colorectal cancer (CRC) is one of the most common malignant tumors in the digestive tract, which accounts for 10% of all the malignant tumors in the world. The aim of this study was to identify key genes and miRNAs in CRC diagnosis, prognosis, and therapy and to further explore the potential molecular mechanisms of CRC. Methods The infiltration and metastasis of neutrophils in primary colorectal cancer tissue and paracancerous tissue were observed by immunohistochemical staining. After inducing N2 neutrophils with TGF-β1 in vitro, exosomes were extracted and sequenced, and then the expression differences of miRNAs were screened by using Agilent miRNA microarrays. The data were imported to the Web CARMA for differential expression analysis. The GO and KEGG enrichment analysis were performed using DIANA-MirPath v3.0 using TargetScan database. And the corresponding targets were imported into Gephi for network analysis. The expression level of differentially expressed miRNA using quantitative real-time polymerase chain reaction (RT-PCR) was validated. Results A total of 2 miRNAs were found to be associated with N2 neutrophils, in which the expression of hsa-miR-4780 was upregulated and the expression of hsa-miR-3938 was downregulated in N2 neutrophils, compared with the neutrophils. In addition, the results of miRNA-targets networks showed that the hsa-mir-3938 and hsa-mir-4780 could regulate TUSC1 and ZNF197. The expression level of hsa-miR-4780 and hsa-miR-3938 wase validated in accordance with the results of RT-PCR. Conclusion The hsa-mir-3938 and hsa-mir-4780 were differentially expressed between N2 neutrophils and neutrophils. Moreover, the regulation of TUSC1 and ZNF197 by these DEmiRNA established the theoretical basis for the mechanism of N2 type neutrophils regulating the invasion and metastasis of CRC cells and provided the potential biomarker for prognosis for clinical treatment of CRC.
- Published
- 2020
40. A Novel Compound YS-5-23 Exhibits Neuroprotective Effect by Reducing β-Site Amyloid Precursor Protein Cleaving Enzyme 1’s Expression and H2O2-Induced Cytotoxicity in SH-SY5Y Cells
- Author
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Nan Zheng, Deyang Sun, Lingling Zheng, Weihong Song, Jian Huang, Chen Cheng, and Wei-Shuo Fang
- Subjects
0301 basic medicine ,chemistry.chemical_classification ,Reactive oxygen species ,biology ,Akt/PKB signaling pathway ,General Medicine ,Mitochondrion ,medicine.disease_cause ,Biochemistry ,Neuroprotection ,Cell biology ,03 medical and health sciences ,Cellular and Molecular Neuroscience ,030104 developmental biology ,0302 clinical medicine ,chemistry ,Apoptosis ,mental disorders ,Amyloid precursor protein ,biology.protein ,medicine ,030217 neurology & neurosurgery ,PI3K/AKT/mTOR pathway ,Oxidative stress - Abstract
The abnormally accumulated amyloid-β (Aβ) and oxidative stress contribute to the initiation and progression of Alzheimer's disease (AD). β-site amyloid precursor protein cleaving enzyme 1 (BACE1) is the rate-limiting enzyme for the production of Aβ. Furthermore, Aβ was reported to increase oxidative stress; then the overproduced oxidative stress continues to increase the expression and activity of BACE1. Consequently, inhibition of both BACE1 and oxidative stress is a better strategy for AD therapy compared with those one-target treatment methods. In the present study, our novel small molecule YS-5-23 was proved to possess both of the activities. Specifically, we found that YS-5-23 reduces BACE1's expression in both SH-SY5Y and Swedish mutated amyloid precursor protein (APP) overexpressed HEK293 cells, and it can also suppress BACE1's expression induced by H2O2. Moreover, YS-5-23 decreases H2O2-induced cytotoxicity including alleviating H2O2-induced apoptosis and loss of mitochondria membrane potential (MMP) because it attenuates the reactive oxygen species (ROS) level elevated by H2O2. Meanwhile, PI3K/Akt signaling pathway is involved in the anti-H2O2 and BACE1 inhibition effect of YS-5-23. Our findings indicate that YS-5-23 may develop as a drug candidate in the prevention and treatment of AD.
- Published
- 2020
41. Bioluminescent Sensor Reveals that Carboxylesterase 1A is a Novel Endoplasmic Reticulum-Derived Serologic Indicator for Hepatocyte Injury
- Author
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Ya-Di Zhu, Peng Gao, Xiao-Qing Guan, Jian Huang, Yang Yu, Li-Wei Zou, Dan-Dan Wang, Ling Yang, Ping Wang, Guang-Bo Ge, and Qiang Jin
- Subjects
Bioengineering ,02 engineering and technology ,Biology ,Endoplasmic Reticulum ,01 natural sciences ,Carboxylesterase ,Mice ,medicine ,Human proteome project ,Extracellular ,Animals ,Humans ,Bioluminescence ,Biomarker discovery ,Instrumentation ,Fluid Flow and Transfer Processes ,Liver injury ,Process Chemistry and Technology ,Endoplasmic reticulum ,010401 analytical chemistry ,Endoplasmic Reticulum Stress ,021001 nanoscience & nanotechnology ,medicine.disease ,0104 chemical sciences ,medicine.anatomical_structure ,Liver ,Biochemistry ,Hepatocyte ,Hepatocytes ,0210 nano-technology - Abstract
Discovery of novel liver injury indicators and development of practical assays to detect target indicator(s) would strongly facilitate the diagnosis of liver disorders. Herein, an alternative biomarker discovery strategy was applied to find suitable endoplasmic reticulum-resident protein(s) as serologic indicator(s) for hepatocyte injury via analysis of the human proteome database among plasma and various organs. Both database searching and preliminary experiments suggested that human carboxylesterase 1A (CES1A), one of the most abundant and hepatic-restricted proteins, could serve as a good serologic indicator for hepatocyte injury. Then, a highly selective and practical bioluminescent sensor was developed for real-time sensing of CES1A in various biological systems including plasma. With the help of this bioluminescent sensor, the release of hepatic CES1A into the extracellular medium or the circulation system could be directly monitored. Further investigations demonstrated that serum activity levels of CES1A were elevated dramatically in mice with liver injury or patients with liver diseases. Collectively, this study provided solid evidence to support that CES1A was a novel serological indicator for hepatocyte injury. Furthermore, the strategy used in this study paved a new way for the rational discovery of practical indicators to monitor the dynamic progression of injury in a given tissue or organ.
- Published
- 2020
42. SSH: A Tool for Predicting Hydrophobic Interaction of Monoclonal Antibodies Using Sequences
- Author
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Pengcheng Yao, Jian Huang, Birga Anteneh Mengesha, Juanjuan Kang, Anthony Mackitz Dzisoo, and Benjamin Klugah-Brown
- Subjects
0301 basic medicine ,Drug ,Support Vector Machine ,Article Subject ,medicine.drug_class ,media_common.quotation_subject ,Computational biology ,Monoclonal antibody ,General Biochemistry, Genetics and Molecular Biology ,Hydrophobic effect ,03 medical and health sciences ,0302 clinical medicine ,Sequence Analysis, Protein ,Protein methods ,medicine ,media_common ,General Immunology and Microbiology ,biology ,Chemistry ,Immunogenicity ,Hydrophilic interaction chromatography ,Antibodies, Monoclonal ,General Medicine ,030104 developmental biology ,ROC Curve ,Drug development ,030220 oncology & carcinogenesis ,biology.protein ,Medicine ,Antibody ,Hydrophobic and Hydrophilic Interactions ,Software ,Research Article ,Chromatography, Liquid - Abstract
Therapeutic antibodies are one of the most important parts of the pharmaceutical industry. They are widely used in treating various diseases such as autoimmune diseases, cancer, inflammation, and infectious diseases. Their development process however is often brought to a standstill or takes a longer time and is then more expensive due to their hydrophobicity problems. Hydrophobic interactions can cause problems on half-life, drug administration, and immunogenicity at all stages of antibody drug development. Some of the most widely accepted and used technologies for determining the hydrophobic interactions of antibodies include standup monolayer adsorption chromatography (SMAC), salt-gradient affinity-capture self-interaction nanoparticle spectroscopy (SGAC-SINS), and hydrophobic interaction chromatography (HIC). However, to measure SMAC, SGAC-SINS, and HIC for hundreds of antibody drug candidates is time-consuming and costly. To save time and money, a predictor called SSH is developed. Based on the antibody’s sequence only, it can predict the hydrophobic interactions of monoclonal antibodies (mAbs). Using the leave-one-out crossvalidation, SSH achieved 91.226% accuracy, 96.396% sensitivity or recall, 84.196% specificity, 87.754% precision, 0.828 Mathew correlation coefficient (MCC), 0.919 f-score, and 0.961 area under the receiver operating characteristic (ROC) curve (AUC).
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- 2020
43. SUMOylation modulates the LIN28A‐let‐7 signaling pathway in response to cellular stresses in cancer cells
- Author
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Xian Zhao, Yanli Wang, Jinzhuo Dou, Jian Huang, Aiwu Zhou, Haihua Yuan, Jianxiu Yu, Hailong Zhang, Zimei Shu, and Ran Chen
- Subjects
0301 basic medicine ,Cancer Research ,LIN28A ,Carcinogenesis ,SUMO protein ,0302 clinical medicine ,Neoplasms ,Research Articles ,biology ,Chemistry ,RNA-Binding Proteins ,General Medicine ,lcsh:Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,Cell Hypoxia ,Cell biology ,Gene Expression Regulation, Neoplastic ,Oncology ,030220 oncology & carcinogenesis ,Molecular Medicine ,Signal transduction ,Protein Binding ,Signal Transduction ,Research Article ,medicine.drug ,binding affinity to precursor let‐7 ,Mice, Nude ,lcsh:RC254-282 ,03 medical and health sciences ,stresses ,Stress, Physiological ,In vivo ,Cell Line, Tumor ,microRNA ,Genetics ,medicine ,Animals ,Humans ,Uridine ,Cell Proliferation ,Cisplatin ,Lysine ,Sumoylation ,cancer progression ,MicroRNAs ,030104 developmental biology ,Mutation ,Cancer cell ,biology.protein ,let‐7 biogenesis ,Biogenesis ,Dicer - Abstract
LIN28A is a conserved RNA‐binding protein that inhibits the biogenesis of let‐7 microRNAs, thus promoting cancer progression. However, mechanisms underlying the activation of the LIN28A‐let‐7 signaling pathway remain poorly understood. Here, we show that LIN28A is SUMOylated in vivo and in vitro at K15, which is increased by hypoxia but reduced by chemotherapy drugs such as Cisplatin and Paclitaxel. SUMOylation of LIN28A aggravates its inhibition of let‐7 maturation, resulting in a stark reduction in let‐7, which promotes cancer cell proliferation, migration, invasion, and tumor growth in vivo. Mechanistically, SUMOylation of LIN28A increases its binding affinity with the precursor let‐7 (pre‐let‐7), which subsequently enhances LIN28A‐mediated recruitment of terminal uridylyltransferase TUT4 and simultaneously blocks DICER processing of pre‐let‐7, thereby reducing mature let‐7 production. These effects are abolished in SUMOylation‐deficient mutant LIN28A‐K15R. In summary, these findings shed light on a novel mechanism by which SUMOylation could regulate the LIN28A‐let‐7 pathway in response to cellular stress in cancer cells., This study demonstrated that SUMOylation of LIN28A increases the binding affinity of LIN28A with pre‐let‐7, subsequently to promote TUT4‐mediated uridylation and block DICER processing of pre‐let‐7, thus leading to the reduction of mature let‐7. SUMOylation of Lin28A is regulated in response to cancer cellular stresses such as hypoxia and chemotherapy drug treatment, which have implications in cancer prognosis and therapy.
- Published
- 2020
44. Functional Deficits in Mice Expressing Human Interleukin 8
- Author
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Di Chen, Jian Huang, Carla R. Scanzello, Flavia Vitale, Frances S. Shofer, Julie Michelle Brent, Zuozhen Tian, Yejia Zhang, Ling Qin, Lutian Yao, Angela K Brice, and Dessislava Markova
- Subjects
Male ,medicine.medical_specialty ,Chemokine ,040301 veterinary sciences ,Transgene ,General Biochemistry, Genetics and Molecular Biology ,Nesting Behavior ,0403 veterinary science ,Mice ,Internal medicine ,Complementary DNA ,medicine ,Back pain ,Animals ,Humans ,Interleukin 8 ,Intervertebral Disc ,Original Research ,General Veterinary ,biology ,Cartilage ,Interleukin-8 ,Embryo ,Intervertebral disc ,04 agricultural and veterinary sciences ,Disease Models, Animal ,Endocrinology ,medicine.anatomical_structure ,biology.protein ,Female ,Inflammation Mediators ,medicine.symptom ,Low Back Pain ,Signal Transduction - Abstract
We showed previously that inflammatory mediators, including IL8, in intervertebral disc tissues from patients with discogenic back pain may play a key role in back pain. To investigate the molecular mechanism of IL8 signaling in back pain, we generated a mouse model that conditionally expresses human (h) IL8. We hypothesized that hIL8 levels affect mouse activity and function. Briefly, hIL8 cDNA was inserted into the pCALL2 plasmid, linearized, and injected into mouse embryos. Resulting pCALL2–hIL8 mice were then bred with GDF5–Cre mice to express the transgene in cartilage and intervertebral disc (IVD) tissues. Functional capacities including nest-making and other natural behaviors were measured. Both male and female mice expressing hIL8 showed lower nesting scores than did littermates that did not express hIL8 (n = 14 to 16 per group). At 28 wk of age, mice expressing hIL8 (n = 35) spent more time immobile and eating during each night than littermate controls (n = 33). Furthermore, hIL8-expressing mice traveled shorter distances and at a lower average speed than littermate controls. Thus, in an initial effort to investigate the relationship between this chemokine and mouse behavior, we have documented changes in normal activities in mice conditionally expressing hIL8.
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- 2020
45. Fractionation and antioxidant activities of the water-soluble polysaccharides from Lonicera japonica Thunb
- Author
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Xun Min, Ping Liu, Tao Zhang, Yan Yang, Jian Huang, Hongping Liu, Limei Zhou, and Xinyu Bai
- Subjects
Antioxidant ,medicine.medical_treatment ,02 engineering and technology ,Fractionation ,Chemical Fractionation ,Polysaccharide ,Biochemistry ,High-performance liquid chromatography ,Antioxidants ,Japonica ,03 medical and health sciences ,Polysaccharides ,Structural Biology ,Arabinogalactan ,Spectroscopy, Fourier Transform Infrared ,medicine ,Food science ,Molecular Biology ,Chromatography, High Pressure Liquid ,030304 developmental biology ,Glucan ,chemistry.chemical_classification ,0303 health sciences ,biology ,Molecular mass ,Plant Extracts ,Monosaccharides ,Water ,Free Radical Scavengers ,General Medicine ,021001 nanoscience & nanotechnology ,biology.organism_classification ,Molecular Weight ,Lonicera ,stomatognathic diseases ,Solubility ,chemistry ,0210 nano-technology - Abstract
L. japonica has been used as food and healthy beverage due to the good nutrition. Although the chemical compounds have been extensively studied, polysaccharide compositions remain unclear. In this study, water-soluble polysaccharides of L. japonica were fractionated into one neutral fraction (LJP-N) and four acidic fractions (LJP-A-1 ~ LJP-A-4) by a combination of ion-exchange and gel permeation chromatographies. The structures and antioxidant activities of these factions were determined by HPLC, FT-IR and the radical scavenging activities, anti-hemolysis inhibitory ability, protective effect against DNA damage. Results showed that LJP-N was a starch-like glucan with some arabinogalactan; acidic fractions were all pectic polysaccharide, with the average molecular weights approximately ranging from 19.0 to 383.8 kDa. LJP-A-2 ~ LJP-A-4 were similar to each other, mainly composed of GalA (>50%) with some Gal and Ara residues, while LJP-A-1 mainly composed of Gal and Ara (>70%). LJP-A-3 was defined as HG-type pectic polysacchride, with a trace of RG-I domain by NMR experiment. The antioxidant activity of LJP fractions showed different activities, and LJP-A-3 and LJP-A-4 exhibited noticeable antioxidant activities by six kinds of evaluated methods comparable with others. The results indicated that LJP-A-3 and LJP-A-4 could be used as a potential natural source of antioxidant.
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- 2020
46. Pharmacokinetic interaction between a Chinese herbal formula Huosu Yangwei oral liquid and apatinib in vitro and in vivo
- Author
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Zhi-Chao Fu, Liang Zhu, Qi-Long Chen, Wei-Wei Hao, Feng Zhang, Guang-Bo Ge, Sheng-Quan Fang, Jun-Ran Zhu, Jian Huang, and Hong-Mei Ni
- Subjects
Pyridines ,Herb-Drug Interactions ,Pharmaceutical Science ,Antineoplastic Agents ,Oxidative phosphorylation ,Pharmacology ,030226 pharmacology & pharmacy ,Mixed Function Oxygenases ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Cytochrome P-450 Enzyme System ,Pharmacokinetics ,In vivo ,Animals ,Cytochrome P-450 Enzyme Inhibitors ,Humans ,Apatinib ,chemistry.chemical_classification ,biology ,Cytochrome P450 ,In vitro ,Rats ,Enzyme ,chemistry ,030220 oncology & carcinogenesis ,Microsomes, Liver ,Microsome ,biology.protein ,Metabolic Detoxication, Phase I ,Drugs, Chinese Herbal - Abstract
Objectives This study aimed to evaluate the inhibitory effects of Huosu Yangwei oral liquid (HSYW) on cytochrome P450 enzymes (CYPs) and to investigate whether this herbal medicine could modulate the pharmacokinetic behaviour of the co-administered CYP-substrate drug apatinib. Methods Cytochrome P450 enzymes inhibition assays were conducted in human liver microsomes (HLM) by a LC-MS/MS method for simultaneous determination of the oxidative metabolites of eight probe substrates for hepatic CYPs. The modulatory effects of HSYW on the oxidative metabolism of apatinib were investigated in both HLM and rat liver microsomes (RLM). The influences of HSYW on the pharmacokinetic behaviour of apatinib were investigated in rats. Key findings Huosu Yangwei oral liquid inhibited all tested CYPs in human liver preparations, with the IC50 values ranged from 0.3148 to 2.642 mg/ml. HSYW could also inhibit the formation of two major oxidative metabolites of apatinib in liver microsomes from both human and rat. In-vivo assays demonstrated that HSYW could significantly prolong the plasma half-life of apatinib by 7.4-fold and increase the AUC0–inf (nm·h) of apatinib by 43%, when HSYW (10 ml/kg) was co-administered with apatinib (10 mg/kg) in rats. Conclusions Huosu Yangwei oral liquid could inhibit mammalian CYPs and modulated the metabolic half-life of apatinib both in vitro and in vivo.
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- 2020
47. Puerarin Alleviates Lipopolysaccharide-Induced Myocardial Fibrosis by Inhibiting PARP-1 to Prevent HMGB1-Mediated TLR4-NF-κB Signaling Pathway
- Author
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Caiwen Ou, Zehua Li, Xinglong Zhong, Yan Zhou, Wen-Ting Xu, Shu-Yuan Ni, Minsheng Chen, and Dong-Jian Huang
- Subjects
Lipopolysaccharides ,musculoskeletal diseases ,Lipopolysaccharide ,Anti-Inflammatory Agents ,Poly (ADP-Ribose) Polymerase-1 ,chemical and pharmacologic phenomena ,030204 cardiovascular system & hematology ,Pharmacology ,Toxicology ,HMGB1 ,Proinflammatory cytokine ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Western blot ,Puerarin ,Fibrosis ,Animals ,Medicine ,HMGB1 Protein ,Rats, Wistar ,Molecular Biology ,Cells, Cultured ,medicine.diagnostic_test ,biology ,business.industry ,Myocardium ,NF-kappa B ,Fibroblasts ,medicine.disease ,Isoflavones ,Toll-Like Receptor 4 ,Disease Models, Animal ,chemistry ,030220 oncology & carcinogenesis ,biology.protein ,Myocardial fibrosis ,Signal transduction ,Cardiomyopathies ,Cardiology and Cardiovascular Medicine ,business ,Signal Transduction - Abstract
Myocardial fibrosis (MFs) is a crucial pathological process that results in cardiac failure in the development of multiple cardiovascular diseases. Puerarin could reportedly be used to treat a variety of cardiovascular diseases. However, the exact mechanism of puerarin on MFs was not clear enough. The separated primary cardiac fibroblasts (CFs) were induced by lipopolysaccharide (LPS) and treated with puerarin. The levels of TNF-α, IL-6, HMGB1, PARP-1, α-SMA, collagen-1, collagen-3, NF-κB pathways were examined by ELISA, immunofluorescence, RT-qPCR, western blot and immunohistochemistry assays. In addition, MFs rats' model was established using transverse aortic constriction (TAC), and the degree of fibrosis was certified by masson staining. We successfully separated primary CFs, and certified that LPS induction could upregulate the levels of PARP-1, HMGB1, inflammatory cytokines and fibrosis-related proteins (α-SMA, collagen-1 and collagen-3). In addition, we proved that puerarin could weaken MFs, and PARP-1 and HMGB1 expressions, which were induced by LPS in primary CFs. In terms of mechanism, HMGB1 expression could be promoted by PARP-1, and PARP-1 could attenuate the therapeutic effect of puerarin on LPS-induced MFs. Besides, PARP-1-HMGB1-NF-κB pathway was related to the protective effect of puerarin on MFs. In vivo, we also verified the protective efficacy of puerarin on MFs induced by TAC, and puerarin also regulated HMGB1-mediated TLR4-NF-κB signaling pathway. We demonstrated that puerarin could ameliorate MFs by downregulating PARP-1 to inhibit HMGB1-mediated TLR4-NF-κB signaling pathway in LPS-induced primary CFs and TAC-induced MFs rats' model.
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- 2020
48. A recurrent ABCC2 p.G693R mutation resulting in loss of function of MRP2 and hyperbilirubinemia in Dubin-Johnson syndrome in China
- Author
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Yanmeng Li, Wei Zhang, Jidong Jia, Song Yi, Siyu Jia, Jian Huang, Anjian Xu, Xiaojuan Ou, Lina Wu, Hong You, and Donghu Zhou
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0301 basic medicine ,China ,Mutant ,lcsh:Medicine ,Biology ,03 medical and health sciences ,0302 clinical medicine ,Dubin–Johnson syndrome ,medicine ,Missense mutation ,Humans ,Pharmacology (medical) ,Genetics (clinical) ,Exome sequencing ,Cellular localization ,Hyperbilirubinemia ,Genetics ,Jaundice, Chronic Idiopathic ,Multidrug resistance-associated protein 2 ,Research ,lcsh:R ,General Medicine ,Biological function ,medicine.disease ,Adenosine triphosphate-binding cassette subfamily C member 2 ,030104 developmental biology ,Mutation (genetic algorithm) ,Mutation ,Organic anion transport ,030211 gastroenterology & hepatology ,Multidrug Resistance-Associated Proteins ,Dubin-Johnson syndrome - Abstract
Background Dubin-Johnson syndrome (DJS) is a rare autosomal recessive disorder characterized by predominantly conjugated hyperbilirubinemia that is caused by pathogenic mutations in the adenosine triphosphate-binding cassette subfamily C member 2 (ABCC2) gene, which encodes multidrug resistance-associated protein 2 (MRP2). However, little is known about the causative mutation of DJS in China. Recently, we have reported ABCC2 p.G693R mutation in two unrelated cases. In the present study, we investigated the pathogenicity of the ABCC2 p.G693R mutation in DJS in China. Methods Clinical and genetic analysis was conducted for the two patients with the ABCC2 p.G693R mutation. Whole exome sequencing for mutations in other known hyperbilirubinemia-related genes was conducted for the cases with ABCC2 p.G693R. Expression and cellular localization of the mutant MRP2 p.G693R were analyzed by Western blotting and immunofluorescence assay, respectively. Organic anion transport activity was evaluated by the analysis of glutathione-conjugated-monochlorobimane. Results The two DJS patients with ABCC2 p.G693R mutation, which was conserved among different species, showed typical hyperbilirubinemia phenotype. No pathogenic mutation was identified in the other known hyperbilirubinemia related genes. Functional studies in three cell lines showed that the expression, localization and the organic anion transport activity were significantly compromised by MRP2 p.G693R mutation compared with wild-type MRP2. Conclusions The recurrent ABCC2 p.G693R mutation is associated with loss of function of the MRP2 protein and may result in hyperbilirubinemia in DJS in China.
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- 2020
49. circRNA circFUT8 Upregulates Krüpple-like Factor 10 to Inhibit the Metastasis of Bladder Cancer via Sponging miR-570-3p
- Author
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Qingqing He, Wei Dong, Jian Huang, Junming Bi, Haide Qin, Tianxin Lin, Dong Yan, Meihua Yang, and Lifang Huang
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0301 basic medicine ,Untranslated region ,Cancer Research ,circFUT8 ,Tumor suppressor gene ,miR-570-3p ,KLF10 ,Biology ,lcsh:RC254-282 ,Article ,Metastasis ,law.invention ,03 medical and health sciences ,0302 clinical medicine ,law ,microRNA ,Gene expression ,medicine ,Pharmacology (medical) ,Bladder cancer ,lymph node metastasis ,RNA ,medicine.disease ,lcsh:Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,Slug ,030104 developmental biology ,Oncology ,030220 oncology & carcinogenesis ,Cancer research ,bladder cancer ,Molecular Medicine ,Suppressor - Abstract
Circular RNAs (circRNAs) are broad and diverse endogenous non-coding RNAs. Emerging evidence has revealed that circRNAs play pivotal roles in cancers, regulating the gene expression by acting as a microRNA (miRNA) sponge. However, the biological functions of circRNAs in bladder cancer (BCa) remain largely unknown. In this study, we identified an altered circRNA, termed circFUT8, by screening RNA sequencing data generated from three BCa tissues and matched adjacent normal bladder tissues. Quantitative real-time PCR analysis demonstrated that circFUT8 was downregulated in BCa tissues and correlated with patients’ prognosis, histological grade, and lymph node (LN) metastasis. Functionally, gain- and loss-of-function assays indicated that circFUT8 inhibited the migration and invasion of BCa cell lines in vitro and LN metastasis in vivo. Mechanistically, circFUT8 directly bound to miR-570-3p and partially abrogated its oncogenic role, and miR-570-3p could suppress the expression of tumor suppressor gene Krüpple-like factor 10 (KLF10) by binding its 3′ untranslated region (3′ UTR). Moreover, we found that circFUT8 promoted the expression of KLF10 by competitively sponging miR-570-3p. In conclusion, circFUT8 functions as a tumor suppressor in BCa cells by targeting the miR-570-3p/KLF10 axis and may serve as a potential biomarker and therapeutic target for the management of BCa patients with LN metastasis. Keywords: circFUT8, bladder cancer, lymph node metastasis, miR-570-3p, KLF10, Slug
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- 2020
50. AGO2 phosphorylation by c-Src kinase promotes tumorigenesis
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Ran Chen, Zhi Yang, Hailong Zhang, Yanli Wang, Shengfang Ge, Jianxiu Yu, Tianqi Liu, Jiayu Fang, Jian Huang, and Xian Zhao
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Male ,0301 basic medicine ,Cancer Research ,PTMs, post-translational modifications ,c-Src, AGO2 ,GST, glutathione S-transferase ,Tyrosine phosphorylation ,Mice ,chemistry.chemical_compound ,0302 clinical medicine ,Neoplasms ,RISC, RNA-induced silencing complex ,Phosphorylation ,Tyrosine ,biology ,Chemistry ,Kinase ,Y, tyr, tyrosine ,Tryptophan ,AGO2, Argonaute-2 ,IP, immunoprecipitation ,lcsh:Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,Cell biology ,Saracatinib ,Cell Transformation, Neoplastic ,src-Family Kinases ,030220 oncology & carcinogenesis ,Argonaute Proteins ,RNA Interference ,Disease Susceptibility ,Tyrosine kinase ,Protein Binding ,Signal Transduction ,Original article ,RISC complex ,Models, Biological ,lcsh:RC254-282 ,P4H, prolyl-4-hydroxylase ,Cell Line ,03 medical and health sciences ,miRNAs, microRNAs ,Animals ,Humans ,Protein Kinase Inhibitors ,Binding Sites ,EGFR, epidermal growth factor receptor ,MicroRNAs ,030104 developmental biology ,Tumorigenesis ,biology.protein ,Ectopic expression ,F, phenylalanine ,Dicer - Abstract
Numerous studies have reported that c-Src is highly expressed with high tyrosine kinase activity in a variety of tumors. However, it remains unclear whether c-Src contributes to the miRNA pathway. Here, we report that c-Src can interact with and phosphorylate AGO2, a core component of RISC complex, at tyr 393, tyr 529 and tyr749. Mechanistically, it is confirmed that c-Src phosphorylation of AGO2 at tyr393 reduces its binding to DICER, thereby suppressing the maturation of long-loop pre-miR-192. However, the other two phosphorylation sites don’t work on this function. Significantly, Ectopic expression of wild-type AGO2, but not the three tyrosine site mutants, has an obvious tumor-promoting effect in vitro and in vivo, which function could be blocked thoroughly by treatment with c-Src kinase inhibitor, Saracatinib. Our findings identify AGO2 as c-Src target and c-Src phosphorylation of AGO2 may therefore play a potential role during tumor progress. Keywords: c-Src, AGO2, Tyrosine phosphorylation, Tumorigenesis, Saracatinib
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- 2020
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