87 results on '"Maria Eugenia Farias"'
Search Results
2. Phosphate-Arsenic Interactions in Halophilic Microorganisms of the Microbial Mat from Laguna Tebenquiche: from the Microenvironment to the Genomes
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Eduardo Castro-Nallar, Maria Eugenia Farias, Jana Milucka, Mariana N. Soria, Claudio Meneses, Lars Wörmer, V. Durán-Toro, Manuel Contreras, and L. A. Saona
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Ecology ,Microorganism ,Phosphorus ,Arsenate ,Soil Science ,chemistry.chemical_element ,Biology ,biology.organism_classification ,Phosphate ,chemistry.chemical_compound ,Microbial ecology ,chemistry ,Microbial population biology ,Botany ,Microbial mat ,Ecology, Evolution, Behavior and Systematics ,Archaea - Abstract
Arsenic (As) is a metalloid present in the earth's crust and widely distributed in the environment. Due to its high concentrations in the Andean valleys and its chemical similarity with phosphorus (P), its biological role in Andean Microbial Ecosystems (AMEs) has begun to be studied. The AMEs are home to extremophilic microbial communities that form microbial mats, evaporites, and microbialites inhabiting Andean lakes, puquios, or salt flats. In this work, we characterize the biological role of As and the effect of phosphate in AMEs from the Laguna Tebenquiche (Atacama Desert, Chile). Using micro X-ray fluorescence, the distribution of As in microbial mat samples was mapped. Taxonomic and inferred functional profiles were obtained from enriched cultures of microbial mats incubated under As stress and different phosphate conditions. Additionally, representative microorganisms highly resistant to As and able to grow under low phosphate concentration were isolated and studied physiologically. Finally, the genomes of the isolated Salicola sp. and Halorubrum sp. were sequenced to analyze genes related to both phosphate metabolism and As resistance. The results revealed As as a key component of the microbial mat ecosystem: (i) As was distributed across all sections of the microbial mat and represented a significant weight percentage of the mat (0.17 %) in comparison with P (0.40%); (ii) Low phosphate concentration drastically changed the microbial community in microbial mat samples incubated under high salinity and high As concentrations; (iii) Archaea and Bacteria isolated from the microbial mat were highly resistant to arsenate (up to 500 mM), even under low phosphate concentration; (iv) The genomes of the two isolates were predicted to contain key genes in As metabolism (aioAB and arsC/acr3) and the genes predicted to encode the phosphate-specific transport operon (pstSCAB-phoU) are next to the arsC gene, suggesting a functional relationship between these two elements.
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- 2021
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3. Uncovering cryptochrome/photolyase gene diversity in aquatic microbiomes exposed to diverse UV-B regimes
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Virginia Helena Albarracín, Daniel Gonzalo Alonso-Reyes, and Maria Eugenia Farias
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0303 health sciences ,media_common.quotation_subject ,010501 environmental sciences ,Aquatic Science ,Biology ,01 natural sciences ,03 medical and health sciences ,Cryptochrome ,Metagenomics ,Evolutionary biology ,Microbiome ,Photolyase ,Gene ,Ecology, Evolution, Behavior and Systematics ,030304 developmental biology ,0105 earth and related environmental sciences ,Diversity (politics) ,media_common - Abstract
During evolution, microorganisms exposed to high amounts of UV-B irradiation developed fine-tuned photo-enzymes called ‘photolyases’ to cope with DNA damage caused by UV-B. These photoreceptors, belonging to the cryptochrome/photolyase family (CPF), have been well characterized at the genomic and proteomic level in bacteria isolated from a wide range of environments. In this work, we go further towards studying the abundance of CPF in aquatic microbial communities from different geographic regions across the globe. Metagenomics data combined with geo-referenced solar irradiation measurements indicated that the higher the UV-B level in the microbiome’s environment, the higher the abundance of CPF genes and lower the microbial diversity. A connection between CPF abundance and radiation intensity/photoperiod was found. Likewise, cryptochrome-like genes were found to be abundant in most exposed microbiomes, indicating a complementary role to standard photolyases. We observed that CPFs are more likely to be present in dominant taxa of the highly irradiated microbiomes, suggesting an evolutionary force for survival and dominance under extreme solar exposure. This work reports 3 novel CPF clades, proving the potential of global metagenomic analyses in detecting novel proteins.
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- 2020
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4. Assessment of the plasmidome of an extremophilic microbial community from the Diamante Lake, Argentina
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Maria Eugenia Farias, Julian Rafael Dib, Luis Alberto Saona, María Florencia Perez, Friedhelm Meinhardt, Anja Poehlein, and Rolf Daniel
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DNA, Bacterial ,Science ,Microbial communities ,Biology ,EXTREME EVIRONMENT ,Microbiology ,Article ,DNA sequencing ,purl.org/becyt/ford/1 [https] ,Extremophiles ,Plasmid ,Drug Resistance, Bacterial ,Extreme environment ,purl.org/becyt/ford/1.6 [https] ,Gene ,Phylogeny ,Genetics ,Multidisciplinary ,Bacteria ,Environmental microbiology ,Sewage ,PUNA ARGENTINA ,Microbiota ,High-Throughput Nucleotide Sequencing ,PLASMIDOME ,Archaea ,Lakes ,Microbial population biology ,Medicine ,Plasmidome ,Mobile genetic elements ,Adaptation ,PLASMID ,Plasmids - Abstract
Diamante Lake located at 4589 m.a.s.l. in the Andean Puna constitutes an extreme environment. It is exposed to multiple extreme conditions such as an unusually high concentration of arsenic (over 300 mg L−1) and low oxygen pressure. Microorganisms thriving in the lake display specific genotypes that facilitate survival, which include at least a multitude of plasmid-encoded resistance traits. Hence, the genetic information provided by the plasmids essentially contributes to understand adaptation to different stressors. Though plasmids from cultivable organisms have already been analyzed to the sequence level, the impact of the entire plasmid-borne genetic information on such microbial ecosystem is not known. This study aims at assessing the plasmidome from Diamante Lake, which facilitates the identification of potential hosts and prediction of gene functions as well as the ecological impact of mobile genetic elements. The deep-sequencing analysis revealed a large fraction of previously unknown DNA sequences of which the majority encoded putative proteins of unknown function. Remarkably, functions related to the oxidative stress response, DNA repair, as well as arsenic- and antibiotic resistances were annotated. Additionally, all necessary capacities related to plasmid replication, mobilization and maintenance were detected. Sequences characteristic for megaplasmids and other already known plasmid-associated genes were identified as well. The study highlights the potential of the deep-sequencing approach specifically targeting plasmid populations as it allows to evaluate the ecological impact of plasmids from (cultivable and non-cultivable) microorganisms, thereby contributing to the understanding of the distribution of resistance factors within an extremophilic microbial community. Fil: Perez, María Florencia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Saona Acuña, Luis Alberto. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Farias, Maria Eugenia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Poehlein, Anja. Universität Göttingen; Alemania Fil: Meinhardt, Friedhelm. Münster Universität; Alemania Fil: Daniel, Rolf. Universität Göttingen; Alemania Fil: Dib, Julian Rafael. Universidad Nacional de Tucumán; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina
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- 2021
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5. Geobiology of Andean Microbial Ecosystems Discovered in Salar de Atacama, Chile
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Adrian Turjanski, Natalia C. Muñoz-Herrera, Daniel Gustavo Poire, Manuel Contreras, Agustina I. Lencina, Maria Eugenia Farias, Federico A. Vignale, Fernando Novoa, Elizabeth Chihuailaf, and Daniel Kurth
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Microbiology (medical) ,Bacteroidia ,Biology ,Deltaproteobacteria ,Microbiology ,Extremophiles ,Microbial mats ,Gammaproteobacteria ,Geología ,Microbial mat ,extremophiles ,Original Research ,Endoevaporites ,Ecology ,Microbialites ,microbialites ,Alphaproteobacteria ,Verrucomicrobia ,Bacteroidetes ,microbial mats ,biology.organism_classification ,QR1-502 ,Andean lakes ,endoevaporites ,Proteobacteria - Abstract
The Salar de Atacama in the Chilean Central Andes harbors unique microbial ecosystems due to extreme environmental conditions, such as high altitude, low oxygen pressure, high solar radiation, and high salinity. Combining X-ray diffraction analyses, scanning electron microscopy and molecular diversity studies, we have characterized twenty previously unexplored Andean microbial ecosystems in eight different lakes and wetlands from the middle-east and south-east regions of this salt flat. The mats and microbialites studied are mainly formed by calcium carbonate (aragonite and calcite) and halite, whereas the endoevaporites are composed predominantly of gypsum and halite. The carbonate-rich mats and microbialites are dominated by Bacteroidetes and Proteobacteria phyla. Within the phylum Proteobacteria, the most abundant classes are Alphaproteobacteria, Gammaproteobacteria and Deltaproteobacteria. While in the phylum Bacteroidetes, the most abundant classes are Bacteroidia and Rhodothermia. Cyanobacteria, Chloroflexi, Planctomycetes, and Verrucomicrobia phyla are also wellrepresented in the majority of these systems. Gypsum endoevaporites, on the contrary, are dominated by Proteobacteria, Bacteroidetes, and Euryarchaeota phyla. The Cyanobacteria phylum is also abundant in these systems, but it is less represented in comparison to mats and microbialites. Regarding the eukaryotic taxa, diatoms are key structural components in most of the microbial ecosystems studied. The genera of diatoms identified were Achnanthes, Fallacia, Halamphora, Mastogloia, Navicula, Nitzschia, and Surirella. Normally, in the mats and microbialites, diatoms form nano-globular carbonate aggregates with filamentous cyanobacteria and other prokaryotic cells, suggesting their participation in the mineral precipitation process. This work expands our knowledge of the microbial ecosystems inhabiting the extreme environments from the Central Andes region, which is important to ensure their protection and conservation., Centro de Investigaciones Geológicas
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- 2021
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6. Extremophilic bacteria restrict the growth of Macrophomina phaseolina by combined secretion of polyamines and lytic enzymes
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Carolina Belfiore, Miguel A. Blázquez, Luciana Nieva Muratore, Alejandro Ferrando, Anna Sole-Gil, Maria Eugenia Farias, and Ana Paula Santos
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Extremophilic microorganisms ,biology ,Hypha ,Microorganism ,fungi ,food and beverages ,biology.organism_classification ,Applied Microbiology and Biotechnology ,Microbiology ,Spermidine ,chemistry.chemical_compound ,chemistry ,Lytic cycle ,Macrophomina phaseolina ,Biocontrol agents ,Putrescine ,Polyamines ,Lytic enzymes ,Polyamine ,TP248.13-248.65 ,Bacteria ,Biotechnology ,Research Article - Abstract
[EN] Extremophilic microorganisms were screened as biocontrol agents against two strains of Macrophomina phaseolina (Mp02 and 06). Stenotrophomonas sp. AG3 and Exiguobacterium sp. S58 exhibited a potential in vitro antifungal effect on Mp02 growth, corresponding to 52.2% and 40.7% inhibition, respectively. This effect was confirmed by scanning electron microscopy, where images revealed marked morphological alterations in fungus hyphae. The bacteria were found to secrete lytic enzymes and polyamines. Exiguobacterium sp. S56a was the only strain able to reduce the growth of the two strains of M. phaseolina through their supernatant. Antifungal supernatant activity was correlated with the ability of bacteria to synthesize and excrete putrescine, and the exogenous application of this polyamine to the medium phenocopied the bacterial antifungal effects. We propose that the combined secretion of putrescine, spermidine, and lytic enzymes by extremophilic microorganism predispose these microorganisms to reduce the disease severity occasioned by M. phaseolina in soybean seedlings., The authors acknowledge the generous financial support by the PICT V Bicentenario 2010 1788 Project (FONCyT, Argentina). This work was performed in the context of a project called ¿Análisis de Adaptación al Cambio Climático en Humedales Andinos¿. ID: 6188775¿8-LP13. Ministerio del Medio Ambiente, Región de Antofagasta. We are also grateful to Lic. C. Pérez Brandan for providing us with the M. phaseolina strains used in this study.
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- 2021
7. Montmorillonite facilitated Pb(II) biomineralization by Chlorella sorokiniana FK in soil
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Zhang Zijia, Ling Xia, Shaoxian Song, Maria Eugenia Farias, Hao Yi, Li Wu, Jiaqi Tan, Yinta Li, Delong Meng, and Rosa María Torres Sáncheze
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Biomineralization ,Chlorella sorokiniana ,Environmental Engineering ,biology ,Chemistry ,Environmental remediation ,Health, Toxicology and Mutagenesis ,Chlorella ,Ammonia volatilization from urea ,biology.organism_classification ,Pollution ,chemistry.chemical_compound ,Soil ,Adsorption ,Montmorillonite ,Lead ,Bentonite ,Environmental Chemistry ,Clay minerals ,Waste Management and Disposal ,Nuclear chemistry - Abstract
In this study, Chlorella sorokiniana FK, isolated from lead-zinc tailings, was employed for Pb(II) biomineralization with or without montmorillonite (MMT) addition in soil. Batch experiment results showed that montmorillonite facilitated Pb3(CO3)2(OH)2 formation on the surface of Chlorella-MMT composite, thus increasing algal cells' tolerance to Pb(II) poisoning. Surprisingly, Pb(II) adsorbed and biomineralized by Chlorella-MMT composite was 2.69 times and 3.76 times as much as that by Chlorella alone, respectively. The montmorillonite facilitated Chlorella-induced Pb biomineralization by promoting both photosynthesis and urea hydrolysis, mainly due to more hydroxyl functional groups generated during its binding with Chlorella and its high pH buffering capacity. Moreover, the SEM-EDS analysis indicated that the biomineral particles shifted from algal cell surface to montmorillonite surface in the composite during long-term Pb-detoxification. In-situ soil Pb(II) remediation experiments with Chlorella-MMT composites further showed that Pb was immobilized as carbonate form in the short term and as residue fraction in the long term. This study made the first attempt to explore the facilitating effects of montmorillonite on metal-carbonate precipitation mediated by microalgae and to develop a green, sustainable, and effective strategy for immobilization of heavy metal in soil by combining clay minerals and microalgae.
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- 2021
8. Genomic insights into an andean multiresistant soil actinobacterium of biotechnological interest
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Maria Eugenia Farias, Fátima Silvina Galván, Martín Vázquez, Daniel Gonzalo Alonso-Reyes, Virginia Helena Albarracín, Luciano Raúl Portero, and Natalia Noelia Alvarado
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Physiology ,Biodiversity ,Argentina ,Nesterenkonia ,Context (language use) ,Biology ,Ectoine ,Applied Microbiology and Biotechnology ,Genome ,chemistry.chemical_compound ,Soil ,Extremophiles ,Osmotic Pressure ,Botany ,Extremophile ,Ecosystem ,Puna ,Soil Microbiology ,Original Paper ,Resistance (ecology) ,General Medicine ,Genomics ,Actinobacteria ,chemistry ,Desiccation ,Genome, Bacterial ,Biotechnology - Abstract
Central-Andean Ecosystems (between 2000 and 6000 m above sea level (masl) are typical arid-to-semiarid environments suffering from the highest total solar and ultraviolet-B radiation on the planet but displaying numerous salt flats and shallow lakes. Andean microbial ecosystems isolated from these environments are of exceptional biodiversity enduring multiple severe conditions. Furthermore, the polyextremophilic nature of the microbes in such ecosystems indicates the potential for biotechnological applications. Within this context, the study undertaken used genome mining, physiological and microscopical characterization to reveal the multiresistant profile of Nesterenkonia sp. Act20, an actinobacterium isolated from the soil surrounding Lake Socompa, Salta, Argentina (3570 masl). Ultravioet-B, desiccation, and copper assays revealed the strain’s exceptional resistance to all these conditions. Act20’s genome presented coding sequences involving resistance to antibiotics, low temperatures, ultraviolet radiation, arsenic, nutrient-limiting conditions, osmotic stress, low atmospheric-oxygen pressure, heavy-metal stress, and toxic fluoride and chlorite. Act20 can also synthesize proteins and natural products such as an insecticide, bacterial cellulose, ectoine, bacterial hemoglobin, and even antibiotics like colicin V and aurachin C. We also found numerous enzymes for animal- and vegetal-biomass degradation and applications in other industrial processes. The resilience of Act20 and its biotechnologic potential were thoroughly demonstrated in this work. Supplementary Information The online version contains supplementary material available at 10.1007/s11274-021-03129-9
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- 2021
9. Lithifying and Non-Lithifying Microbial Ecosystems in the Wetlands and Salt Flats of the Central Andes
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Maria Eugenia Farias, Federico A. Vignale, Daniel Kurth, Daniel Gustavo Poire, Daniel Guzmán, Mariana N. Soria, Agustina I. Lencina, Jamie S. Foster, Virginia Helena Albarracín, Tatiana Stepanenko, Luis Alberto Saona, Patricio G. Villafañe, and Manuel Contreras
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0301 basic medicine ,Salt pan ,030106 microbiology ,Soil Science ,Wetland ,Biology ,03 medical and health sciences ,Extremophiles ,Microbial ecology ,Microbial mats ,parasitic diseases ,Extreme environment ,Ecosystem ,Geología ,Microbial mat ,Hypersaline lakes ,Ecology, Evolution, Behavior and Systematics ,Endoevaporites ,geography ,geography.geographical_feature_category ,Ecology ,Microbialites ,Biogeochemistry ,Ecología ,Salinity ,030104 developmental biology ,AMEs - Abstract
The wetlands and salt flats of the Central Andes region are unique extreme environments as they are located in high-altitude saline deserts, largely influenced by volcanic activity. Environmental factors, such as ultraviolet (UV) radiation, arsenic content, high salinity, low dissolved oxygen content, extreme daily temperature fluctuation, and oligotrophic conditions, resemble the early Earth and potentially extraterrestrial conditions. The discovery of modern microbialites and microbial mats in the Central Andes during the past decade has increased the interest in this area as an early Earth analog. In this work, we review the current state of knowledge of Central Andes region environments found within lakes, small ponds or puquios, and salt flats of Argentina, Chile, and Bolivia, many of them harboring a diverse range of microbial communities that we have termed Andean Microbial Ecosystems (AMEs). We have integrated the data recovered from all the known AMEs and compared their biogeochemistry and microbial diversity to achieve a better understanding of them and, consequently, facilitate their protection., Centro de Investigaciones Geológicas
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- 2021
10. Carbon fixation and rhodopsin systems in microbial mats from hypersaline lakes Brava and Tebenquiche, Salar de Atacama, Chile
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Manuel Contreras, Maria Eugenia Farias, Dario Ezequiel Elias, María Cecilia Rasuk, and Daniel Kurth
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Geologic Sediments ,Salinity ,Physiology ,Marine and Aquatic Sciences ,Plant Science ,carbone fixation ,Biochemistry ,Plant Tropisms ,purl.org/becyt/ford/1 [https] ,RNA, Ribosomal, 16S ,Environmental DNA ,Microbial mat ,Photosynthesis ,Chile ,Phylogeny ,Data Management ,Plant Growth and Development ,Multidisciplinary ,biology ,Ecology ,Plant Biochemistry ,Microbiota ,Chemical Reactions ,Genomics ,Biodiversity ,Chemistry ,Plant Physiology ,Physical Sciences ,Medicine ,Proteobacteria ,Research Article ,Freshwater Environments ,Computer and Information Sciences ,Multiple Alignment Calculation ,Rhodopsin ,Firmicutes ,Science ,Cyanobacteria ,Research and Analysis Methods ,Tropism ,Carbon Cycle ,Oxidation ,Computational Techniques ,Extremophile ,Genetics ,metagenomic ,Phototropism ,purl.org/becyt/ford/1.6 [https] ,Taxonomy ,Bacteria ,Whole Genome Sequencing ,Phylum ,Bacteroidetes ,Ecology and Environmental Sciences ,Organisms ,Biology and Life Sciences ,Aquatic Environments ,Bodies of Water ,biology.organism_classification ,salt pads microbiology ,Anoxygenic photosynthesis ,Split-Decomposition Method ,Lakes ,Metagenomics ,Earth Sciences ,Organism Development ,Developmental Biology - Abstract
In this work, molecular diversity of two hypersaline microbial mats was compared by Whole Genome Shotgun (WGS) sequencing of environmental DNA from the mats. Brava and Tebenquiche are lakes in the Salar de Atacama, Chile, where microbial communities are growing in extreme conditions, including high salinity, high solar irradiance, and high levels of toxic metals and metaloids. Evaporation creates hypersaline conditions in these lakes and mineral precipitation is a characteristic geomicrobiological feature of these benthic ecosystems. The mat from Brava was more rich and diverse, with a higher number of different taxa and with species more evenly distributed. At the phylum level, Proteobacteria, Cyanobacteria, Chloroflexi, Bacteroidetes and Firmicutes were the most abundant, including ~75% of total sequences. At the genus level, the most abundant sequences were affilitated to anoxygenic phototropic and cyanobacterial genera. In Tebenquiche mats, Proteobacteria and Bacteroidetes covered ~70% of the sequences, and 13% of the sequences were affiliated to Salinibacter genus, thus addressing the lower diversity. Regardless of the differences at the taxonomic level, functionally the two mats were similar. Thus, similar roles could be fulfilled by different organisms. Carbon fixation through the Wood-Ljungdahl pathway was well represented in these datasets, and also in other mats from Andean lakes. In spite of presenting less taxonomic diversity, Tebenquiche mats showed increased abundance and variety of rhodopsin genes. Comparison with other metagenomes allowed identifying xantorhodopsins as hallmark genes not only from Brava and Tebenquiche mats, but also for other mats developing at high altitudes in similar environmental conditions. Fil: Kurth, Daniel German. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Elias, Dario Ezequiel. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. CEMIC-CONICET. Centro de Educaciones Médicas e Investigaciones Clínicas "Norberto Quirno". CEMIC-CONICET; Argentina Fil: Rasuk, Maria Cecilia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Contreras, Emanuel. Centro de Ecología Aplicada (CEA); Chile Fil: Farias, Maria Eugenia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina
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- 2021
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11. Genomic Insights of an Andean Multi-resistant Soil Actinobacterium of Biotechnological Interest
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Martín Vázquez, Fátima Silvina Galván, Virginia Helena Albarracín, Maria Eugenia Farias, Natalia Noelia Alvarado, Daniel Gonzalo Alonso-Reyes, and Luciano Raúl Portero
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chemistry.chemical_compound ,Nutrient ,chemistry ,Botany ,Biodiversity ,Extreme environment ,Ecosystem ,Context (language use) ,Ectoine ,Biology ,Desiccation ,Genome - Abstract
Central Andean Ecosystems (between 2000 and 6000 masl) are typical arid to semiarid environments suffering from the highest total solar and UVB radiation on the planet but displaying numerous salt flats and shallow lakes. Isolated from these environments, Andean Microbial Communities (AME) of exceptional biodiversity endures multiple severe conditions. Also, the poly-extremophilic nature of AME’s microbes indicates the potential for biotechnological applications. In this context, the presented study used genome mining and physiological characterization to reveal the multi-resistant profile of Nesterenkonia sp. Act20, an actinobacterium isolated from the soil surrounding Lake Socompa, Salta, Argentina (3570 m). UV-B, desiccation, and copper assays showed the strain’s exceptional resistance to all these factors. Act20’s genome presented coding sequences involving antibiotics, low temperatures, UV and arsenic resistance, nutrient limiting conditions, osmotic stress response, low atmospheric oxygen pressure, heavy metal stress, and resistance to fluoride and chlorite. Act20 can also synthesize proteins and natural products such as an insecticide, bacterial cellulose, ectoine, bacterial hemoglobin, and even antibiotics like colicin V and aurachin C. We also found numerous enzymes for animal and vegetal biomass degradation and application in other industrial processes.The herein report shed light on the microbial adaptation to high-altitude environments, its possible extrapolation for studying other extreme environments of relevance, and its application to industrial and biotechnological processes.HIGHLIGHTSArid Andean Soils are attractive sources of microbial strains useful in biotechnological processes.Physiological studies revealed the multi-resistant nature of the poly-extremophile Nesterenkonia sp. Act20.Act20’s genome analysis showed a complete set of genes coding for proteins involved in resistance to multiple stresses, including extremoenzymes and extremolytes.
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- 2020
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12. Characterization of Rhodococcus sp. A5wh isolated from a high altitude Andean lake to unravel the survival strategy under lithium stress
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María V. Curia, Maria Eugenia Farias, and Carolina Belfiore
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0301 basic medicine ,Microbiology (medical) ,Microorganism ,030106 microbiology ,Lithium ,Biology ,Microbiology ,Fight-or-flight response ,Extremophiles ,03 medical and health sciences ,Survival strategy ,Rhodococcus ,Extremophile ,Stress adaptation ,Extremófilos ,Ecology ,Proteomic ,General Medicine ,biology.organism_classification ,Molecular biology ,Proteómica ,Adaptación al estrés ,Litio ,Rhodococcus sp - Abstract
Lithium (Li) is widely distributed in nature and has several industrial applications. The largest reserves of Li (over 85%) are in the so-called "triangle of lithium" that includes the Salar de Atacama in Chile, Salar de Uyuni in Bolivia and Salar del Hombre Muerto in Argentina. Recently, the use of microorganisms in metal recovery such as copper has increased; however, there is little information about the recovery of lithium. The strain Rhodococcus sp. A5wh used in this work was previously isolated from Laguna Azul. The assays revealed that this strain was able to accumulate Li (39.52% of Li/g microbial cells in 180 min) and that it was able to grow in its presence up to 1 M. In order to understand the mechanisms implicated in Li tolerance, a proteomic approach was conducted. Comparative proteomic analyses of strain A5wh exposed and unexposed to Li reveal that 17 spots were differentially expressed. The identification of proteins was performed by MALDI-TOF/MS, and the obtained results showed that proteins involved in stress response, transcription, translations, and metabolism were expressed under Li stress. This knowledge constitutes the first proteomic approach to elucidate the strategy followed by Rhodococcus to adapt to Li. El litio (Li) es un elemento químico con múltiples aplicaciones industriales. Es considerado uno de los minerales más ampliamente distribuidos en la naturaleza. Sus mayores reservas (más del 85%) se encuentran en el llamado «triángulo de litio»: salar de Atacama, en Chile; salar de Uyuni, en Bolivia, y salar del Hombre Muerto, en Argentina. En los últimos años, el empleo de microorganismos en la recuperación de metales se ha visto incrementado; sin embargo, hay muy poca información sobre la recuperación de Li por esta vía. En este estudio se trabajó con Rhodococcus sp. A5wh, cepa aislada de Laguna Azul. Los ensayos revelaron que este microorganismo fue capaz de acumular Li (39,52% de Li/g de biomasa en 180 min) y de crecer en presencia de este metaloide hasta una concentración de 1 M. Para comprender los mecanismos implicados en la tolerancia al Li, se llevó a cabo el análisis proteómico comparativo de esta cepa expuesta o no expuesta al Li. Los resultados revelaron 17 spots expresados en forma diferencial. La identificación de las proteínas se realizó porMALDI-TOF/MS. Este estudio constituye el primer enfoque proteómico para dilucidar la estrategia seguida por Rhodococcus en su adaptación al estrés.
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- 2018
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13. Genomic comparison between members of the Salinibacteraceae family, and description of a new species of Salinibacter (Salinibacter altiplanensis sp. nov.) isolated from high altitude hypersaline environments of the Argentinian Altiplano
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Josefa Antón, Sara Díaz, Konstantinos T. Konstantinidis, Pedro González-Torres, Rudolf Amann, Tomeu Viver, Maria Eugenia Farias, Peter Kaempfer, Mohammad Ali Amoozegar, Luis H. Orellana, Ramon Rosselló-Móra, Mercedes Urdiain, Azadeh Shahinpei, Vladimir Benes, Universidad de Alicante. Departamento de Fisiología, Genética y Microbiología, and Ecología Microbiana Molecular
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DNA, Bacterial ,0301 basic medicine ,Rhodopsin ,Salinity ,Salinibacteraceae ,Halophiles ,030106 microbiology ,Argentina ,Biology ,Microbiología ,Applied Microbiology and Biotechnology ,Microbiology ,Genome ,Intraspecific competition ,purl.org/becyt/ford/1 [https] ,Ciencias Biológicas ,03 medical and health sciences ,Biología Celular, Microbiología ,RNA, Ribosomal, 16S ,MALDI-TOF MS ,purl.org/becyt/ford/1.6 [https] ,Gene ,Phylogeny ,Ecology, Evolution, Behavior and Systematics ,Phylotype ,Bacteroidetes ,Phylum ,Altitude ,Strain (biology) ,Salinibacter ruber ,Sequence Analysis, DNA ,Type VI Secretion Systems ,Salt lake ,Halophile ,Bacterial Typing Techniques ,Lakes ,030104 developmental biology ,Evolutionary biology ,Genomic ,CRISPR-Cas Systems ,Water Microbiology ,Salterns ,CIENCIAS NATURALES Y EXACTAS ,Genome, Bacterial - Abstract
The application of tandem MALDI-TOF MS screening with 16S rRNA gene sequencing of selected isolates has been demonstrated to be an excellent approach for retrieving novelty from large-scale culturing. The application of such methodologies in different hypersaline samples allowed the isolation of the culture-recalcitrant Salinibacter ruber second phylotype (EHB-2) for the first time, as well as a new species recently isolated from the Argentinian Altiplano hypersaline lakes. In this study, the genome sequences of the different species of the phylum Rhodothermaeota were compared and the genetic repertoire along the evolutionary gradient was analyzed together with each intraspecific variability. Altogether, the results indicated an open pan-genome for the family Salinibacteraceae, as well as the codification of relevant traits such as diverse rhodopsin genes, CRISPR-Cas systems and spacers, and one T6SS secretion system that could give ecological advantages to an EHB-2 isolate. For the new Salinibacter species, we propose the name Salinibacter altiplanensis sp. nov. (the designated type strain is AN15T = CECT 9105T = IBRC-M 11031T). Fil: Viver, Tomeu. Consejo Superior de Investigaciones Cientificas. Instituto Mediterraneo de Estudios Avanzados; España Fil: Orellana, Luis. Instituto Tecnológico de Georgia; Estados Unidos. Georgia Institute of Techology; Estados Unidos Fil: González Torres, Pedro. Universidad de Alicante; España Fil: Díaz, Sara. Consejo Superior de Investigaciones Cientificas. Instituto Mediterraneo de Estudios Avanzados; España Fil: Urdiain, Mercedes. Consejo Superior de Investigaciones Cientificas. Instituto Mediterraneo de Estudios Avanzados; España Fil: Farias, Maria Eugenia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Benes, Vladimir. European Molecular Biology Laboratory Heidelberg; Fil: Kaempfer, Peter. Justus Liebig University Giessen; Fil: Shahinpei, Azadeh. University Of Tehran; Irán Fil: Ali Amoozegar, Mohammad. University Of Tehran; Irán Fil: Amann, Rudolf. Max Planck Institut Für Marine Mikrobiologie; Fil: Antón, Josefa. Universidad de Alicante; España Fil: Konstantinidis, Konstantinos T.. Georgia Institute of Techology; Estados Unidos. Instituto Tecnológico de Georgia; Estados Unidos Fil: Rosselló Móra, Ramon. Consejo Superior de Investigaciones Cientificas. Instituto Mediterraneo de Estudios Avanzados; España
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- 2018
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14. Culture-dependent and -independent methods reveal dominance of halophilic Euryarchaeota in high-altitude Andean lakes
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Virginia Helena Albarracín, Marcela Alejandra Ferrero, Maria Eugenia Farias, Marcos Javier Maldonado, and José Augusto Lara
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0301 basic medicine ,Halophiles ,Culture dependent ,Ecology ,030106 microbiology ,Aquatic Science ,Biology ,Effects of high altitude on humans ,biology.organism_classification ,Archaea ,Halophile ,Ciencias Biológicas ,Extremophiles ,03 medical and health sciences ,030104 developmental biology ,Biología Celular, Microbiología ,Dominance (ecology) ,Extremophile ,Euryarchaeota ,Arsenicv ,CIENCIAS NATURALES Y EXACTAS ,Ecology, Evolution, Behavior and Systematics - Abstract
The hypersaline and extreme environments of the so-called high-altitude Andean lakes in the dry central region of the Andes are considered pristine ecosystems of biotechnological interest. By using culture-dependent and -independent methods, we aimed to describe the phylogenetic affiliation and ecological importance of Archaea thriving in extreme, hypersaline lakes and salt flats in the Argentinean and Chilean Puna. For this purpose, water and sediment samples were collected from 14 lakes and salt flats. Denaturing gradient gel electrophoresis (DGGE) indicated that representatives of the phylum Euryarchaeota dominated the microbial community in all samples. Most of the DGGE bands were assigned to the family Halobacteriaceae, while the rest corresponded to Methanocaldococcaceae, Methanobacteriaceae, Methanococcaceae, Methanosarcinaceae, and Methanothermaceae. In addition, isolation procedures yielded single colonies of 53 pure isolates belonging to the following genera: Haloarcula, Halomicrobium, Halopiger, Halorubrum, Natrialba, Natrinema, Natronorubrum, and Natronococcus. All strains proved to be polyextremophiles, with high tolerance to NaCl, UV-B radiation, and high arsenic concentration. Fil: Maldonado, Marcos Javier. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Albarracín, Virginia Helena. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Lara, José Augusto. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Ferrero, Marcela Alejandra. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Farias, Maria Eugenia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina
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- 2018
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15. Biogeographical patterns of bacterial and archaeal communities from distant hypersaline environments
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M.del R. Mora-Ruiz, Maria Eugenia Farias, Ana Cifuentes, Bernardo González, Ramon Rosselló-Móra, Francisca Font-Verdera, C. Pérez-Fernández, and Alejandro Orfila
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0301 basic medicine ,Geologic Sediments ,Salinity ,Microbial Consortia ,Otras Ciencias de la Tierra y relacionadas con el Medio Ambiente ,SALTERNS ,HYPERSALINE SEDIMENTS ,Biology ,Bacterial Physiological Phenomena ,Applied Microbiology and Biotechnology ,Microbiology ,Ciencias de la Tierra y relacionadas con el Medio Ambiente ,03 medical and health sciences ,RNA, Ribosomal, 16S ,ARCHAEA ,Ecology, Evolution, Behavior and Systematics ,OPERATIONAL PHYLOGENETIC UNITS ,Bacteria ,Ecology ,biology.organism_classification ,Archaea ,Phylogeography ,BRINES ,030104 developmental biology ,BACTERIA ,Water Microbiology ,CIENCIAS NATURALES Y EXACTAS - Abstract
Microorganisms are globally distributed but new evidence shows that the microbial structure of their communities can vary due to geographical location and environmental parameters. In this study, 50 samples including brines and sediments from Europe, Spanish-Atlantic and South America were analysed by applying the operational phylogenetic unit (OPU) approach in order to understand whether microbial community structures in hypersaline environments exhibited biogeographical patterns. The fine-tuned identification of approximately 1000 OPUs (almost equivalent to ?species?) using multivariate analysis revealed regionally distinct taxa compositions. This segregation was more diffuse at the genus level and pointed to a phylogenetic and metabolic redundancy at the higher taxa level, where their different species acquired distinct advantages related to the regional physicochemical idiosyncrasies. The presence of previously undescribed groups was also shown in these environments, such as Parcubacteria, or members of Nanohaloarchaeota in anaerobic hypersaline sediments. Finally, an important OPU overlap was observed between anoxic sediments and their overlaying brines, indicating versatile metabolism for the pelagic organisms. Fil: Mora Ruiz, M.del R.. Consejo Superior de Investigaciones Cientificas. Instituto Mediterraneo de Estudios Avanzados; España Fil: Cifuentes, Ana. Consejo Superior de Investigaciones Cientificas. Instituto Mediterraneo de Estudios Avanzados; España Fil: Font Verdera, Francisca. Consejo Superior de Investigaciones Cientificas. Instituto Mediterraneo de Estudios Avanzados; España Fil: Pérez Fernández, César A.. Universidad de Puerto Rico; Puerto Rico Fil: Farias, Maria Eugenia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: González, Bernardo V.. Universidad Adolfo Ibanez; Chile Fil: Orfila, Alejandro. Consejo Superior de Investigaciones Cientificas. Instituto Mediterraneo de Estudios Avanzados; España Fil: Rosselló Móra, Ramón. Consejo Superior de Investigaciones Cientificas. Instituto Mediterraneo de Estudios Avanzados; España
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- 2018
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16. Microbial Communities of High-Elevation Fumaroles, Penitentes, and Dry Tephra 'Soils' of the Puna de Atacama Volcanic Zone
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Maria Eugenia Farias, Adam J. Solon, Lara Vimercati, Dorota L. Porazinska, Cristina Dorador, Pablo Arán, John L. Darcy, and Steven K. Schmidt
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0301 basic medicine ,010504 meteorology & atmospheric sciences ,Earth science ,Beta diversity ,Ice field ,Soil Science ,Biology ,Bacterial Physiological Phenomena ,Cyanobacteria ,Spatial distribution ,01 natural sciences ,Soil ,03 medical and health sciences ,Algae ,RNA, Ribosomal, 16S ,Exobiology ,Cluster Analysis ,Chile ,Tephra ,Phylogeny ,Soil Microbiology ,Ecology, Evolution, Behavior and Systematics ,0105 earth and related environmental sciences ,geography ,geography.geographical_feature_category ,Bacteria ,Ecology ,Microbiota ,Temperature ,Computational Biology ,Biodiversity ,biology.organism_classification ,Archaea ,Fumarole ,030104 developmental biology ,Volcano ,Alpha diversity ,Desert Climate ,Extreme Environments - Abstract
The aim of this study was to understand the spatial distribution of microbial communities (18S and 16S rRNA genes) across one of the harshest terrestrial landscapes on Earth. We carried out Illumina sequencing using samples from two expeditions to the high slopes (up to 6050 m.a.s.l.) of Volcán Socompa and Llullaillaco to describe the microbial communities associated with the extremely dry tephra compared to areas that receive water from fumaroles and ice fields made up of nieves penitentes. There were strong spatial patterns relative to these landscape features with the most diverse (alpha diversity) communities being associated with fumaroles. Penitentes did not significantly increase alpha diversity compared to dry tephra at the same elevation (5825 m.a.s.l.) on Volcán Socompa, but the structure of the 18S community (beta diversity) was significantly affected by the presence of penitentes on both Socompa and Llullaillaco. In addition, the 18S community was significantly different in tephra wetted by penitentes versus dry tephra sites across many elevations on Llullaillaco. Traditional phototrophs (algae and cyanobacteria) were abundant in wetter tephra associated with fumaroles, and algae (but not cyanobacteria) were common in tephra associated with penitentes. Dry tephra had neither algae nor cyanobacteria but did host potential phototrophs in the Rhodospirillales on Volcán Llullaillaco, but not on Socompa. These results provide new insights into the distribution of microbes across one of the most extreme terrestrial environments on Earth and provide the first ever glimpse of life associated with nieves penitentes, spire-shaped ice structures that are widespread across the mostly unexplored high-elevation Andean Central Volcanic Zone.
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- 2018
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17. Characterization and Comparison of Microbial Soil Diversity in Two Andean Peatlands in Different States of Conservation-Vega Tocorpuri
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Maria Eugenia Farias, Ana Paula Santos, Carolina Belfiore, Ana Fernández, and Manuel Contreras
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Biogeochemical cycle ,Marsh ,Peat ,010504 meteorology & atmospheric sciences ,Wetland ,010501 environmental sciences ,ALTERED SOIL ,01 natural sciences ,Ciencias Biológicas ,purl.org/becyt/ford/1 [https] ,PEATLAND ,Ecosystem ,purl.org/becyt/ford/1.6 [https] ,Bog ,0105 earth and related environmental sciences ,geography ,geography.geographical_feature_category ,biology ,Ecology ,Vegetation ,Ecología ,biology.organism_classification ,Environmental science ,CIENCIAS NATURALES Y EXACTAS ,MICROBIAL DIVERSITY ,Acidobacteria - Abstract
Cerro Tocorpuri, belongs to the II region of Chile, in San Pedro de Atacama, on the border of Chile-Bolivia. The presence of a more or less constant supply of water conditions the existence of characteristic vegetation systems known as bogs (bofedales, vegas and marshes). These wetlands have a cultural, environmental and economic social importance. As a result of the exploitation of aquatic rights peatlands began to dry up with the consequent loss of natural resources and damage to ancestral rights, and natural resources. The microbiome in wetlands plays an important role in biogeochemical processes and microbial activities there is crucial to the functions of wetland systems. The relationship between microbial diversity and soil function is unknown, but it has been assumed that biodiversity influences ecosystem stability, productivity, and resilience to stress. In the present work, the soil characteristics and the associated microbial biodiversity were studied, comparing samples of active and deteriorated peatland. It was seen that the loss of water causes great changes in the physical-chemical characteristics of the soil, which leads to a modification of the microbiota Proteobacteria decreased by 18% in deteriorated peatlands, which are evident more sensible to extreme conditions while Acidobacteria, Actinobacteria increased in these sample showing a better adaptation to the change of conditions. In view of the fact, that high Andean Peatlands are exposed to increasing environmental impact. This preliminary comparative study of pristine and altered soil could guide the research directed to recovery of dead peatlands strategies. Fil: Belfiore, Carolina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Fernandez, Ana. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Santos, Ana Paula. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Contreras, Manuel. Pontificia Universidad Católica de Chile. Facultad de Ciencias Biológicas. Departamento de Ecología; Chile Fil: Farias, Maria Eugenia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina
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- 2018
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18. A Unique Natural Laboratory to Study Polyextremophile Microorganisms: Diamante Lake as a Window to the Origin of Life
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Tatiana Stepanenko, Agustina I. Lencina, Maria Eugenia Farias, Mariana N. Soria, and Luis Alberto Saona Acuña
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biology ,Ecology ,Microorganism ,Arsenate ,chemistry.chemical_element ,biology.organism_classification ,chemistry.chemical_compound ,chemistry ,Abiogenesis ,Haloarchaea ,Environmental science ,Extreme environment ,Gaylussite ,Arsenic ,Arsenite - Abstract
Diamante Lake is located at 4589 m above sea level (m a.s.l.) inside the Galan Volcano caldera and presents extreme environmental conditions, such as high arsenic concentration (210 mg l−1), salinity, pH and UV radiation. Until 2010, most studies in the area had largely overlooked the microbial biodiversity in Diamante Lake. With the advent of high throughput sequencing, it became possible to study the microbial communities of environmental samples using metagenomic approaches. In a recent work, we discovered red biofilms forming on the surface of sedimentary rocks on the bottom of the lake containing the rare mineral gaylussite. A metagenomic analysis of these biofilms revealed a predominance of haloarchaea (>96%) over other prokaryotic or eukaryotic organisms. To thrive under the extreme conditions in the lake, these biofilms use different metabolic and physiologic strategies: (1) to avoid the arsenic uptake into the cell, this is done through highly specific phosphate transporters (Pst) and consequently, (2) to take advantage bioenergetically of the high extracellular arsenic concentration and obtain energy from arsenite oxidation and to perform anaerobic respiration of arsenate. Contrary to what could be expected, the required enzymes for these arsenic metabolisms were likely not acquired recently by the selective pressure within Diamante Lake, but rather correspond to reminiscences of primitive metabolisms that could date back to even the origins of the haloarchaea lineage billions of years ago. Diamante Lake is a unique environment in the world and represents an open window to study the evolution of life on Earth and the adaptations required to survive under the extreme conditions that prevailed on the ancient Earth and that are currently found on other planets.
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- 2020
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19. Uncovering Photolyase/Cryptochrome Genes Diversity in Aquatic Microbiomes Exposed to Diverse UV-B Regimes
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Maria Eugenia Farias, Virginia Helena Albarracín, and Daniel Gonzalo Alonso-Reyes
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metagenomic analyses ,DNA damage ,Microorganism ,Biology ,UV ,purl.org/becyt/ford/1 [https] ,Cryptochrome ,Metagenomics ,Evolutionary biology ,Microbiome ,purl.org/becyt/ford/1.6 [https] ,Clade ,Photolyase ,extremophile ,Gene - Abstract
During evolution, microorganisms exposed to high UV-B doses developed a fine-tuned photo-enzymes called ?photolyases? to cope with DNA damage by UV-B. These photoreceptors belonging to the Cryptochrome/Photolyase Family (CPF) were well characterized at the genomic and proteomic level in bacteria isolated from a wide range of environments. In this work, we go further towards studying the abundance of CPF on aquatic microbial communities from different geographic regions across the globe. Metagenomics data combined with geo-referenced solar irradiation measurements indicated that the higher the UV-B dose suffered by the microbiome´s environment, the higher the abundance of CPF genes and lower the microbial diversity. A connection between CPF abundance and radiation intensity/photoperiod was reported. Likewise, cryptochrome-like genes were found abundant in most exposed microbiomes, indicating a complementary role to standard photolyases. Also, we observed that CPFs are more likely present in dominant taxa of the highly irradiated microbiomes, suggesting an evolutionary force for survival and dominance under extreme solar exposure. Finally, this work reported three novel CPF clades not identified so far, proving the potential of global metagenomic analyses in detecting novel proteins. Fil: Alonso Reyes, Daniel Gonzalo. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Farias, Maria Eugenia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Albarracín, Virginia Helena. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina
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- 2019
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20. Novel nematode species in living stromatolites in the Andean Puna
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María Florencia Perez, Julian Rafael Dib, Maria Eugenia Farias, Romina Elisa D'almeida, and Marcia Elizabeth García
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biology ,Zoología, Ornitología, Entomología, Etología ,biology.organism_classification ,EXTREME ENVIRONMENT ,NEMATODES ,Ciencias Biológicas ,purl.org/becyt/ford/1 [https] ,Nematode ,STROMATOLITES ,Botany ,PUNA ,Animal Science and Zoology ,purl.org/becyt/ford/1.6 [https] ,Ecology, Evolution, Behavior and Systematics ,CIENCIAS NATURALES Y EXACTAS - Abstract
The recently discovered "living" stromatolites in the Argentinean Puna are considered one of the most extreme stromatolites found so far. A rich biodiversity of bacteria, archaea and algae were previously reported in such stromatolites. As nematodes are the most numerous multicellular animals on Earth, the aim of this work was to investigate their presence in the stromatolites from Socompa lake at 3570 meters above sea level (masl). Nematodes were extracted and identified as belonging to the Monhysteridae family, with 91-92% homology to Diplolaimella dievengatensis. The phylogenetic analysis suggested they are novel species and probably belong to a new genus. This study represents the first report related to the presence of novel nematodes in such peculiar stromatolites. Knowing their functions and genetic features involved in the adaptation to these harsh conditions could help to elucidate important aspects about the ecological impact of these organisms in hostile environments. Недавно обнаруженные живые строматолиты Андского плоскогорья считаются самыми необычными из всех известных ранее. Богатство разнообразия бактерий и архей было ранее отмечено для строматолитов. Поскольку нематоды — самые многочисленные многоклеточные на планете Земля, то задачей работы было обнаружение нематод в строматолитах озера Сокомпа, расположенного на 3570 метров над уровнем моря. В ходе работы нематоды были обнаружены и определены как принадлежащие семейству Monhysteridae и с вероятностью 91–92% отнесены к виду Diplolaimella dievengatensis. В то же время филогенетический анализ показал, что обнаруженный вид представляет собой новый для науки вид, принадлежащий неописанному ранее роду нематод. Настоящая работа представляет собой краткое информационное сообщение о первой находке нематод в необычных пресноводных строматолитах. Новые знания о функциональных и генетических особенностях, приведших к адаптации в необычных условиях среды, позволят понять экологическую роль нематод в сообществах пресноводных строматолитов. Fil: D'almeida, Romina Elisa. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Instituto Superior de Investigaciones Biológicas. Universidad Nacional de Tucumán. Instituto Superior de Investigaciones Biológicas; Argentina Fil: García, Marcia Elizabeth. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Perez, Maria Florencia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Farias, Maria Eugenia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Dib, Julian Rafael. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina. Universidad Nacional de Tucumán. Facultad de Bioquímica, Química y Farmacia; Argentina
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- 2019
21. Polyextremophilic Bacteria from High Altitude Andean Lakes: Arsenic Resistance Profiles and Biofilm Production
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Luciano Raúl Portero, Virginia Helena Albarracín, Federico Zannier, Maria Eugenia Farias, Omar Federico Ordoñez, and Luciano José Martinez
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0301 basic medicine ,Article Subject ,Ultraviolet Rays ,Microorganism ,030106 microbiology ,lcsh:Medicine ,chemistry.chemical_element ,General Biochemistry, Genetics and Molecular Biology ,Arsenic ,Ciencias Biológicas ,purl.org/becyt/ford/1 [https] ,03 medical and health sciences ,Bioremediation ,Biología Celular, Microbiología ,Food science ,purl.org/becyt/ford/1.6 [https] ,Ecosystem ,Phylogeny ,2. Zero hunger ,General Immunology and Microbiology ,biology ,Arsenic toxicity ,Acinetobacter ,Chemistry ,Altitude ,lcsh:R ,Biofilm ,General Medicine ,Biodegradation ,Exiguobacterium ,biology.organism_classification ,Adaptation, Physiological ,Lakes ,030104 developmental biology ,Biodegradation, Environmental ,extremofilos ,Biofilms ,Arsenico ,EPS ,Bacteria ,CIENCIAS NATURALES Y EXACTAS ,Research Article - Abstract
High levels of arsenic present in the High Altitude Andean Lakes (HAALs) ecosystems selected arsenic-resistant microbial communities which are of novel interest to study adaptations mechanisms potentially useful in bioremediation processes. We herein performed a detailed characterization of the arsenic tolerance profiles and the biofilm production of two HAAL polyextremophiles, Acinetobacter sp. Ver3 (Ver3) and Exiguobacterium sp. S17 (S17). Cellular adherence over glass and polypropylene surfaces were evaluated together with the effect of increasing doses and oxidative states of arsenic over the quality and quantity of their biofilm production. The arsenic tolerance outcomes showed that HAAL strains could tolerate higher arsenic concentrations than phylogenetic related strains belonging to the German collection of microorganisms and cell cultures (Deutsche Sammlung von Mikroorganismen und Zellkulturen, DSMZ), which suggest adaptations of HAAL strains to their original environment. On the other hand, the crystal violet method (CV) and SEM analysis showed that Ver3 and S17 were able to attach to solid surfaces and to form the biofilm. The quantification of biofilms production in 48 hours´ cultures through CV shows that Ver3 yielded higher production in the treatment without arsenic cultured on a glass support, while S17 yield higher biofilm production under intermediate arsenic concentration on glass supports. Polypropylene supports had negative effects on the biofilm production of Ver3 and S17. SEM analysis shows that the highest biofilm yields could be associated with a larger number of attached cells as well as the development of more complex 3D multicellular structures. Fil: Zannier, Federico. Universidad Nacional de Tucumán; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Portero, Luciano Raúl. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina. Universidad Nacional de Tucumán; Argentina Fil: Ordoñez, Omar Federico. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Martinez, Luciano Jose. Universidad Nacional de Tucumán; Argentina Fil: Farias, Maria Eugenia. Universidad Nacional de Tucumán; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Albarracín, Virginia Helena. Universidad Nacional de Tucumán; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina
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- 2019
22. Cadmium removal from diluted wastewater by using high-phosphorus-culture modified microalgae
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Chunyan Tang, Maria Eugenia Farias, Wang Zhixin, Shaoxian Song, Yinta Li, and Ling Xia
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Cadmium ,biology ,Phosphorus ,High phosphorus ,General Physics and Astronomy ,chemistry.chemical_element ,02 engineering and technology ,010402 general chemistry ,021001 nanoscience & nanotechnology ,biology.organism_classification ,01 natural sciences ,Didymogenes palatina ,0104 chemical sciences ,Metal ,Adsorption ,chemistry ,Algae ,Wastewater ,Environmental chemistry ,visual_art ,visual_art.visual_art_medium ,Physical and Theoretical Chemistry ,0210 nano-technology - Abstract
In this study, living algae Didymogenes palatina XR was cultured in high-phosphorus medium for efficient Cd2+ immobilization from diluted wastewater solution. Algae cultivated from different phosphorus concentration medium was used to investigate its production and adsorption performances of Cd2+. This study showed that microalgae is sensitive to low concentration of heavy metal Cd, and different concentrations of phosphorus culture could regulate the surface phosphorus loading of microalgae to enhance its adsorption ability of Cd2+. The Cd2+ was further immobilized with the algae surface phosphorus group, such as PO43−, HPO4−, forming metallic mineral Cd-phosphate.
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- 2021
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23. Haloarchaea from the Andean Puna: Biological Role in the Energy Metabolism of Arsenic
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María Cecilia Rasuk, Maria Eugenia Farias, Mariana N. Soria, Manuel Contreras, and Omar Federico Ordoñez
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0301 basic medicine ,Chemoautotrophic Growth ,Arsenate Reductases ,Archaeal Proteins ,Otras Ciencias Biológicas ,030106 microbiology ,Soil Science ,chemistry.chemical_element ,ANDEAN PUNA ,Arsenic ,purl.org/becyt/ford/1 [https] ,CHEMOLITOTROPHIC GROWTH ,Ciencias Biológicas ,03 medical and health sciences ,chemistry.chemical_compound ,HALOARCHAEA ,Microbial ecology ,Botany ,Microbial mat ,BIOENERGETIC PURPOSES ,purl.org/becyt/ford/1.6 [https] ,Phylogeny ,Ecology, Evolution, Behavior and Systematics ,Arsenite ,Ecology ,biology ,Arsenate ,South America ,biology.organism_classification ,Archaea ,Lakes ,030104 developmental biology ,Arsenate reductase ,chemistry ,Biofilms ,Haloarchaea ,Arsenates ,ARSENIC ,Energy Metabolism ,CIENCIAS NATURALES Y EXACTAS - Abstract
Biofilms, microbial mats, and microbialites dwell under highly limiting conditions (high salinity, extreme aridity, pH, and elevated arsenic concentration) in the Andean Puna. Only recent pioneering studies have described the microbial diversity of different Altiplano lakes and revealed their unexpectedly diverse microbial communities. Arsenic metabolism is proposed to be an ancient mechanism to obtain energy by microorganisms. Members of Bacteria and Archaea are able to exploit arsenic as a bioenergetic substrate in either anaerobic arsenate respiration or chemolithotrophic growth on arsenite. Only six aioAB sequences coding for arsenite oxidase and three arrA sequences coding for arsenate reductase from haloarchaea were previously deposited in the NCBI database. However, no experimental data on their expression and function has been reported. Recently, our working group revealed the prevalence of haloarchaea in a red biofilm from Diamante Lake and microbial mat from Tebenquiche Lake using a metagenomics approach. Also, a surprisingly high abundance of genes used for anaerobic arsenate respiration (arr) and arsenite oxidation (aio) was detected in the Diamante’s metagenome. In order to study in depth the role of arsenic in these haloarchaeal communities, in this work, we obtained 18 haloarchaea belonging to the Halorubrum genus, tolerant to arsenic. Furthermore, the identification and expression analysis of genes involved in obtaining energy from arsenic compounds (aio and arr) showed that aio and arr partial genes were detected in 11 isolates, and their expression was verified in two selected strains. Better growth of two isolates was obtained in presence of arsenic compared to control. Moreover, one of the isolates was able to oxidize As[III]. The confirmation of the oxidation of arsenic and the transcriptional expression of these genes by RT-PCR strongly support the hypothesis that the arsenic can be used in bioenergetics processes by the microorganisms flourishing in these environments. Fil: Ordoñez, Omar Federico. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Rasuk, Maria Cecilia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Soria, Mariana Noelia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Contreras, Manuel. Centro de Ecología Aplicada; Chile Fil: Farias, Maria Eugenia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina
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- 2018
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24. Isolation and characterization of plant growth promoting bacteria isolated from andean soil as potential inoculants of soybean seeds
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Maria Eugenia Farias, Carolina Belfiore, Manuel Contreras, and Ana Paula Santos
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0106 biological sciences ,0301 basic medicine ,Rhizosphere ,biology ,Biofertilizer ,Lactococcus ,Otras Ciencias de la Tierra y relacionadas con el Medio Ambiente ,food and beverages ,biology.organism_classification ,Exiguobacterium ,01 natural sciences ,Ciencias de la Tierra y relacionadas con el Medio Ambiente ,purl.org/becyt/ford/1 [https] ,Crop ,purl.org/becyt/ford/1.5 [https] ,03 medical and health sciences ,030104 developmental biology ,Agronomy ,Plant Growth Promoting Bacteria ,Stenotrophomonas ,Microbial inoculant ,Bacteria ,CIENCIAS NATURALES Y EXACTAS ,010606 plant biology & botany ,Andean Soil - Abstract
Argentina is the leading exporter of soybean oil and flour, and the third largest producer of grain. Since, the crop isa matter of great importance to the national economy. Their production depends on the soil as their main resourceto ensure a good productive capacity, so it is necessary to preserve the physical, chemical and biological propertiesof the soil. Although, the indiscriminate use of chemical fertilizers, disturb them. In recent years, there has been atrend towards cleaner production to reduce the use of chemical. One of the alternatives involves biological meansthrough the use of plant growth promoting bacteria. These group of bacteria colonize the rhizosphere of plants andstimulate the plant growth by several mechanisms.The objective of this work was to characterize, identify and evaluate the growth promoting effect of 13 strainsisolated from the Andean vegetation rhizosphere. The bacterial isolates were Enterobacteria, Stenotrophomonas,Pseudomonas, Nocardiodes, Bacillus, Exiguobacterium, Acinetobacter and Lactococcus genera. The results of thebiochemical characterization determined that from the 13 bacterial strains, which produce siderophores, 11possess the catalase enzyme, 10 fixate nitrogen, 12 produce the protease enzyme, 12 solubilize phosphorus, and 11produce indoleacetic acid.The application of different inoculums to the seeds, allowed to obtain plants with longer stem length, moredeveloped roots, larger and more intense coloration leaves than the control plants. The results encourage deeperstudies to achieve the formulation of inoculums to use as a biofertilizer, which would replace chemical fertilizersor reduce their doses. Fil: Belfiore, Carolina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Santos, Ana Paula. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Farias, Maria Eugenia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina
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- 2018
25. Calcium carbonate precipitation in diatom-rich microbial mats: The Laguna Negra hypersaline lake, Catamarca, Argentina
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Fernando J. Gomez, Maria Eugenia Farias, Emmanuelle Gérard, Flavia Jaquelina Boidi, and Cecilia Mlewski
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0301 basic medicine ,030106 microbiology ,Otras Ciencias de la Tierra y relacionadas con el Medio Ambiente ,Geochemistry ,engineering.material ,010502 geochemistry & geophysics ,01 natural sciences ,Ciencias de la Tierra y relacionadas con el Medio Ambiente ,03 medical and health sciences ,chemistry.chemical_compound ,DIATOMS ,CALCIUM CARBONATE ,Microbial mat ,0105 earth and related environmental sciences ,Oncolite ,Calcite ,HYPERSALINE LAKE ,biology ,Aragonite ,Geology ,Hypersaline lake ,biology.organism_classification ,Diatom ,Calcium carbonate ,chemistry ,engineering ,Carbonate ,MICROBIALITES ,CIENCIAS NATURALES Y EXACTAS - Abstract
Carbonate microbialites provide a window to understand microbe-mineral interactions in modern environments and in the geological record. Unraveling microbial versus physicochemical controls and biogeochemical signatures is not always straightforward. Environmental and laboratory studies have shown that microbial activity can play a central role in calcium carbonate precipitation. Most studies have focused on the effects of Bacteria and Archaea activity on carbonate precipitation processes (e.g., cyanobacteria, sulfate-reducing bacteria, sulfide-oxidizing bacteria and iron-reducing bacteria). The influence of eukaryotic activity, such as diatoms and other microalgae, on carbonate precipitation and microbialite formation has been the focus of less attention. This study explores carbonate mineralization in active diatom-rich microbial mats developed in a high-Altitude groundwater-fed hypersaline lake in the Puna region of Catamarca, Argentina. Previous work has focused on the texture, mineralogy, and stable-isotope chemistry of the subfossil oncoidal and laminar microbialites. Here, using 16S rDNA Bacteria diversity analysis, confocal scanning laser microscopy, scanning electron microscopy, and transmittedlight microscopy, we explore the Bacteria and diatom diversity in the microbial mats and the related carbonates textures and make comparisons with similar textures in the associated oncoidal microbialites. Diatom-rich subspherical aggregates, which have not been previously described in the literature, show a diverse microbial community with abundant exopolymeric substances (EPSs) where carbonate precipitation takes place. These aggregates are a main component of the Laguna Negra microbial mats and show anhedral micritic calcite in the EPS matrix as the main mineral component. Similar calcite micrite textures are also preserved as one lamina type in the associated oncoids. On the other hand, where EPS are absent, carbonate precipitation, related to pennate diatom blooms, is represented by euhedral aragonite needles suggesting different mechanisms and controls. Changes in the microbial communities are recorded in the oncoids as different lamina types, providing a link between the currently active mats and the subfossil oncoidal structures. This is a first survey of these previously unexplored diatom-rich microbial mats developed under extreme environmental conditions in the Laguna Negra. Understanding the effect that the interaction between diatoms and prokaryotic communities has on carbonate precipitation may provide some insight on the evolution of microbialite textures and fabrics, and on the change from prokaryote-dominated systems to mixed eukaryotic-prokaryotic systems. Fil: Gomez, Fernando Javier. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Centro de Investigaciones en Ciencias de la Tierra. Universidad Nacional de Córdoba. Facultad de Ciencias Exactas Físicas y Naturales. Centro de Investigaciones en Ciencias de la Tierra; Argentina Fil: Mlewski, Estela Cecilia. Universidad Nacional de Córdoba; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Centro de Investigaciones en Ciencias de la Tierra. Universidad Nacional de Córdoba. Facultad de Ciencias Exactas Físicas y Naturales. Centro de Investigaciones en Ciencias de la Tierra; Argentina Fil: Boidi, Flavia Jaquelina. Universidad Nacional de Córdoba; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Centro de Investigaciones en Ciencias de la Tierra. Universidad Nacional de Córdoba. Facultad de Ciencias Exactas Físicas y Naturales. Centro de Investigaciones en Ciencias de la Tierra; Argentina Fil: Farias, Maria Eugenia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina. Universidad Nacional de Córdoba; Argentina Fil: Gérard, Emmanuelle. Université Paris Diderot - Paris 7; Francia
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- 2018
26. Photolyases and Cryptochromes in UV-resistant Bacteria from High-altitude Andean Lakes
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Federico Zannier, Daniel Gonzalo Alonso-Reyes, Wolfgang Gärtner, Maria Eugenia Farias, Virginia Helena Albarracín, Martin P. Vazquez, and Luciano Raúl Portero
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Ultraviolet Rays ,Otras Ciencias Biológicas ,Biochemistry ,Radiation Tolerance ,Ciencias Biológicas ,purl.org/becyt/ford/1 [https] ,03 medical and health sciences ,Pigment ,Cryptochrome ,Botany ,Extremophile ,Physical and Theoretical Chemistry ,purl.org/becyt/ford/1.6 [https] ,Photolyase ,extremophiles ,030304 developmental biology ,0303 health sciences ,Bacillales ,Phylogenetic tree ,biology ,Acinetobacter ,030306 microbiology ,Chemistry ,Altitude ,photoreceptors ,General Medicine ,South America ,biology.organism_classification ,cryptochromes ,Cryptochromes ,Lakes ,photolyases ,Stromatolite ,visual_art ,visual_art.visual_art_medium ,Adaptation ,Deoxyribodipyrimidine Photo-Lyase ,CIENCIAS NATURALES Y EXACTAS ,Bacteria ,Micrococcaceae - Abstract
“High-altitude Andean Lakes” (HAAL) are pristine environments harboring poly-extremophilic microbes that show combined adaptations to physical and chemical stress such as large daily ambient thermal amplitude, extreme solar radiation levels, intense dryness, alkalinity, high concentrations of arsenic (up to 200 ppm) and dissolved salts. In this work, we compared the UV resistance profiles, pigment content and photoreactivation abilities of three UV-resistant bacteria isolated from distinct niches from HAALs, that is Acinetobacter sp. Ver3 (water, Lake Verde; 4400 m), Exiguobacterium sp. S17 (stromatolite, Lake Socompa, 3570 m) and Nesterenkonia sp. Act20 (soil, Lake Socompa, 3570 m). UV resistance ability of HAAL's strains indicate a clear adaptation to high radiation exposure encountered in their original habitat, which can be explained by genetic and physiological mechanisms named as the UV-resistome. Thus, the UV-resistome depends on the expression of a diverse set of genes devoted to evading or repairing the damage it provoked direct or indirectly. As pigment extraction and photoreactive assays indicate the presence of photoactive molecules, we characterized more in detail proteins with homology to photolyases/cryptochromes members (CPF). Phylogenetic analyses, sequence comparison and 3D modeling with bona fide CPF members were used to prove the presence of functional domains and key residues in the novel proteins. Fil: Portero, Luciano Raúl. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Alonso Reyes, Daniel Gonzalo. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Zannier, Federico. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Farias, Maria Eugenia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Albarracín, Virginia Helena. Centro Integral de Microscopia Electronica; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina
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- 2018
27. Complete Genome Sequences of pLMA1 and pLMA7, Two Large Linear Plasmids of Micrococcus Strains Isolated from a High-Altitude Lake in Argentina
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Rolf Daniel, Friedhelm Meinhardt, Julian Rafael Dib, Martin Wagenknecht, Maria Eugenia Farias, María Florencia Perez, Anja Poehlein, and Jörg Schuldes
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0301 basic medicine ,2. Zero hunger ,Genetics ,Micrococcus ,Bioquímica y Biología Molecular ,Biology ,biology.organism_classification ,Genome ,Ciencias Biológicas ,03 medical and health sciences ,030104 developmental biology ,Altitude ,Plasmid ,Extrachromosomal DNA ,LINEAR PLASMIDS ,HIGH-ALTITUDE LAKE ,Extreme environment ,Prokaryotes ,Molecular Biology ,Gene ,CIENCIAS NATURALES Y EXACTAS - Abstract
The two linear plasmids pLMA1 (109,112 bp) and pLMA7 (82,075 bp) from Micrococcus strains were isolated from a high-altitude lake in the Argentinean Puna, sequenced, and annotated. These extrachromosomal elements are probably conjugative and harbor genes potentially involved in coping with the harsh conditions in such extreme environments. Fil: Dib, Julian Rafael. Universidad Nacional de Tucumán; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Perez, Maria Florencia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Schuldes, Jörg. Universität Göttingen; Alemania. Charité ? Universitätsmedizin Berlin; Fil: Poehlein, Anja. Universität Göttingen; Alemania Fil: Wagenknecht, Martin. Boehringer Ingelheim Gmbh Austria; Austria. Westfalische Wilhelms Universitat; Alemania Fil: Farias, Maria Eugenia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Meinhardt, Friedhelm. Westfalische Wilhelms Universitat; Alemania Fil: Daniel, Rolf. Universität Göttingen; Alemania
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- 2018
28. Arsenic metabolism in high altitude modern stromatolites revealed by metagenomic analysis
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Daniel Kurth, Ariel Fernando Amadio, Virginia Helena Albarracín, Wolfgang Gärtner, Omar Federico Ordoñez, and Maria Eugenia Farias
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0301 basic medicine ,Geologic Sediments ,Firmicutes ,Genómica ,Science ,Otras Ciencias Biológicas ,Deltaproteobacteria ,Article ,METAGENOMICS ,Arsenic ,Ciencias Biológicas ,purl.org/becyt/ford/1 [https] ,03 medical and health sciences ,MICROBIAL MATS ,Proteobacteria ,Genetics ,Gene Regulatory Networks ,Microbial mat ,purl.org/becyt/ford/1.6 [https] ,Phylogeny ,2. Zero hunger ,Multidisciplinary ,biology ,Bacteria ,Ecology ,Bacteroidetes ,DNA SEQUENCING ,Altitude ,Genomics ,Sequence Analysis, DNA ,biology.organism_classification ,Genética ,030104 developmental biology ,Stromatolite ,Microbial population biology ,Metagenomics ,Medicine ,ARSENIC ,CIENCIAS NATURALES Y EXACTAS ,Arsénico - Abstract
Modern stromatolites thrive only in selected locations in the world. Socompa Lake, located in the Andean plateau at 3570 masl, is one of the numerous extreme Andean microbial ecosystems described over recent years. Extreme environmental conditions include hypersalinity, high UV incidence, and high arsenic content, among others. After Socompa’s stromatolite microbial communities were analysed by metagenomic DNA sequencing, taxonomic classification showed dominance of Proteobacteria, Bacteroidetes and Firmicutes, and a remarkably high number of unclassified sequences. A functional analysis indicated that carbon fixation might occur not only by the Calvin-Benson cycle, but also through alternative pathways such as the reverse TCA cycle, and the reductive acetyl-CoA pathway. Deltaproteobacteria were involved both in sulfate reduction and nitrogen fixation. Significant differences were found when comparing the Socompa stromatolite metagenome to the Shark Bay (Australia) smooth mat metagenome: namely, those involving stress related processes, particularly, arsenic resistance. An in-depth analysis revealed a surprisingly diverse metabolism comprising all known types of As resistance and energy generating pathways. While the ars operon was the main mechanism, an important abundance of arsM genes was observed in selected phyla. The data resulting from this work will prove a cornerstone for further studies on this rare microbial community. EEA Rafaela Fil: Kurth, Daniel German. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Amadio, Ariel F. Instituto Nacional de Tecnología Agropecuaria (INTA). Estación Experimental Agropecuaria Rafaela; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina Fil: Ordoñez, Omar F. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Allbarracín, Virginia H. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina. Universidad Nacional de Tucumán. Facultad de Ciencias Naturales. Instituto Miguel Lillo; Argentina Fil: Farías, María E. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Gärtner, Wolfgang. Max-Planck Institute for Chemical Energy Conversion; Alemania
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- 2017
29. Diurnal variation in bacterioplankton composition and DNA damage in the microbial community from an Andean oligotrophic lake
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Maria Eugenia Farias, María V. Fernández-Zenoff, and María C. Estévez
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Ultraviolet radiation ,Microbiology (medical) ,Firmicutes ,Argentina ,Lagunas andinas ,lcsh:QR1-502 ,Pyrimidine dimer ,Microbiology ,lcsh:Microbiology ,lcsh:Infectious and parasitic diseases ,Actinobacteria ,purl.org/becyt/ford/1 [https] ,Ciencias Biológicas ,Botany ,lcsh:RC109-216 ,DGGE ,purl.org/becyt/ford/1.6 [https] ,Electroforesis en gradiente desnaturalizante ,Bacteria ,Radiación ultravioleta ,biology ,Bacteroidetes ,CPD ,General Medicine ,Bacterioplankton ,Ecología ,Plankton ,biology.organism_classification ,Circadian Rhythm ,Lakes ,Microbial population biology ,Andean lakes ,bacteria ,Water Microbiology ,CIENCIAS NATURALES Y EXACTAS ,Temperature gradient gel electrophoresis ,DNA Damage - Abstract
La Laguna Azul es un ambiente oligotrófico localizado a 4560 m de altura y sometido a elevados niveles de radiación solar. La composición de su comunidad bacterioplanctónica fue analizada empleando la técnica de electroforesis en gradiente desnaturalizante y se investigó el impacto de la radiación ultravioleta cuantificando los dímeros de pirimidina (CPD). Además, se expusieron simultáneamente cultivos puros de Acinetobacter johnsonii A2 y Rhodococcus sp. A5 para estudiar la acumulación de CPD. El análisis de los geles mostró siete secuencias pertenecientes a Alpha-proteobacteria (1 banda), Beta-proteobacteria (1 banda), Bacteroidetes (2 bandas), Actinobacteria (1 banda) y Firmicutes (1 banda). A lo largo del día se observaron cambios mínimos en la composición de la comunidad y no se detectaron CPD. A. johnsonii A2 presentó un daño bajo mientras que Rhodococcus sp. A5 no presentó daño en su ADN, sugiriendo que la comunidad bacteriana está muy bien adaptada a este ambiente altamente irradiado. Laguna Azul is an oligotrophic lake situated at 4,560 m above sea level and subject to a high level of solar radiation. Bacterioplankton community composition (BCC) was analysed by denaturing gradient gel electrophoresis and the impact of solar ultraviolet radiation was assessed by measuring cyclobutane pyrimidine dimers (CPD). Furthermore, pure cultures of Acinetobacter johnsonii A2 and Rhodococcus sp. A5 were exposed simultaneously and CPD accumulation was studied. Gel analyses generated a total of 7 sequences belonging to Alpha-proteobacteria (1 band), Beta-proteobacteria (1 band), Bacteroidetes (2 bands), Actinobacteria (1 band), and Firmicutes (1 band). DGGE profi les showed minimal changes in BCC and no CPD was detected even though a high level of damage was found in biodosimeters. A. johnsonii A2 showed low level of DNA damage while Rhodococcus sp. A5 exhibited high resistance since no CPD were detected under natural UV-B exposure, suggesting that the bacterial community is well adapted to this highly solar irradiated environment. Fil: Fernandez Zenoff, Maria Veronica. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina. Universidad Nacional de Tucumán. Facultad de Bioquímica, Química y Farmacia. Instituto de Microbiología; Argentina Fil: Estévez, Maria Cristina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Farias, Maria Eugenia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina
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- 2014
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30. First characterisation of a CPD-class I photolyase from a UV-resistant extremophile isolated from High-Altitude Andean Lakes
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Gopal P. Pathak, Virginia Helena Albarracín, Jean Cadet, Maria Eugenia Farias, Wolfgang Gärtner, Lorena Valle, Claudio D. Borsarelli, Julian Simon, Thierry Douki, Laboratoire Lésions des Acides Nucléiques (LAN), Service de Chimie Inorganique et Biologique (SCIB - UMR E3), Institut Nanosciences et Cryogénie (INAC), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Grenoble Alpes [2016-2019] (UGA [2016-2019])-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Grenoble Alpes [2016-2019] (UGA [2016-2019])-Centre National de la Recherche Scientifique (CNRS)-Institut Nanosciences et Cryogénie (INAC), and Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Grenoble Alpes [2016-2019] (UGA [2016-2019])-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Grenoble Alpes [2016-2019] (UGA [2016-2019])-Centre National de la Recherche Scientifique (CNRS)
- Subjects
ACINETOBACTER ,PHOTOLYASE ,Ultraviolet Rays ,Otras Ciencias Biológicas ,Molecular Sequence Data ,Pyrimidine dimer ,Biology ,7. Clean energy ,purl.org/becyt/ford/1 [https] ,Ciencias Biológicas ,03 medical and health sciences ,chemistry.chemical_compound ,Extremophile ,[SDV.BBM.BC]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Biochemistry [q-bio.BM] ,Physical and Theoretical Chemistry ,purl.org/becyt/ford/1.6 [https] ,Photolyase ,Phylogeny ,ComputingMilieux_MISCELLANEOUS ,030304 developmental biology ,Flavin adenine dinucleotide ,chemistry.chemical_classification ,0303 health sciences ,Acinetobacter ,030306 microbiology ,Altitude ,[SDV.BBM.BC]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Biomolecules [q-bio.BM] ,EXTREMOPHILES ,Complementation ,Lakes ,Enzyme ,chemistry ,Biochemistry ,Pyrimidine Dimers ,Deoxyribodipyrimidine Photo-Lyase ,CIENCIAS NATURALES Y EXACTAS ,DNA ,HIGH-ALTITUDE ANDEAN LAKES ,Nucleotide excision repair - Abstract
UV-resistant Acinetobacter sp. Ver3 isolated from High-Altitude Andean Lakes (HAAL) in Argentinean Puna, one of the highest UV exposed ecosystems on Earth, showed efficient DNA photorepairing ability, coupled to highly efficient antioxidant enzyme activities in response to UV-B stress. We herein present the cloning, expression, and functional characterization of a cyclobutane pyrimidine dimer (CPD)-class I photolyase (Ver3Phr) from this extremophile to prove its involvement in the previously noted survival capability. Spectroscopy of the overexpressed and purified protein identified flavin adenine dinucleotide (FAD) and 5,10-methenyltetrahydrofolate (MTHF) as chromophore and antenna molecules, respectively. All functional analyses were performed in parallel with the ortholog E. coli photolyase. Whereas the E. coli enzyme showed the FAD chromophore as a mixture of oxidised and reduced states, the Ver3 chromophore always remained partly (including the semiquinone state) or fully reduced under all experimental conditions tested. Functional complementation of Ver3Phr in Phr−-RecA E. coli strains was assessed by traditional UFC counting and measurement of DNA bipyrimidine photoproducts by HPLC coupled with electrospray ionisation-tandem mass spectrometry (ESI-MS/MS) detection. The results identified strong photoreactivation ability in vivo of Ver3Phr while its nonphotoreactivation function, probably related with the stimulation of nucleotide excision repair (NER), was not as manifest as for EcPhr. Whether this is a question of the approach using an exogenous photolyase incorporated in a non-genuine host or a fundamental different behaviour of a novel enzyme from an exotic environment will need further studies. Fil: Albarracín, Virginia Helena. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucuman. Planta Piloto de Procesos Industriales Microbiologicos; Argentina. Universidad Nacional de Tucumán. Facultad de Ciencias Naturales e Instituto Miguel Lillo; Argentina. Max Planck Institute for Chemical Energy Conversion; Alemania Fil: Simon, Julian. Max Planck Institute for Chemical Energy Conversion; Alemania Fil: Pathak, Gopal P.. Max Planck Institute for Chemical Energy Conversion; Alemania Fil: Valle, Lorena. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro de Investigaciones y Transferencia de Santiago del Estero. Universidad Nacional de Santiago del Estero. Centro de Investigaciones y Transferencia de Santiago del Estero; Argentina Fil: Douki, Thierry. Laboratoire “Lésions des Acides Nucléiques”; Francia Fil: Cadet, Jean. Laboratoire “Lésions des Acides Nucléiques”; Francia Fil: Borsarelli, Claudio Darío. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro de Investigaciones y Transferencia de Santiago del Estero. Universidad Nacional de Santiago del Estero. Centro de Investigaciones y Transferencia de Santiago del Estero; Argentina Fil: Farias, Maria Eugenia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucuman. Planta Piloto de Procesos Industriales Microbiologicos; Argentina Fil: Gärtner, Wolfgang. Max Planck Institute for Chemical Energy Conversion; Alemania
- Published
- 2014
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31. Characterization of Salinivibrio socompensis sp. nov., A New Halophilic Bacterium Isolated from the High-Altitude Hypersaline Lake Socompa, Argentina
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Cristina Galisteo, Rafael R. de la Haba, Ana Fernández, Maria Eugenia Farias, Clara López-Hermoso, Cristina Sánchez-Porro, Antonio Ventosa, and Universidad de Sevilla. Departamento de Microbiología y Parasitología
- Subjects
Microbiology (medical) ,bacterial taxonomy ,Subspecies ,Microbiology ,Salinivibrio ,Ciencias Biológicas ,purl.org/becyt/ford/1 [https] ,Extremophiles ,03 medical and health sciences ,Stromatolites ,Biología Celular, Microbiología ,Genus ,Virology ,Botany ,Extremophile ,halophilic bacteria ,purl.org/becyt/ford/1.6 [https] ,lcsh:QH301-705.5 ,030304 developmental biology ,new species ,0303 health sciences ,hypersaline lake ,Strain (chemistry) ,biology ,030306 microbiology ,Chemistry ,Hypersaline lake ,Salinivibrio socompensis ,biology.organism_classification ,16S ribosomal RNA ,Halophile ,lcsh:Biology (General) ,CIENCIAS NATURALES Y EXACTAS ,Bacteria - Abstract
The genus Salinivibrio belongs to the family Vibrionaceae and includes Gram-stain-negative, motile by a polar flagellum, and facultatively anaerobic curved rods. They are halophilic bacteria commonly found in hypersaline aquatic habitats and salted foods. This genus includes five species and two subspecies. A presumed novel species, strain S35T, was previously isolated from the high-altitude volcanic, alkaline, and saline lake Socompa (Argentinean Andes). In this study we carried out a complete taxonomic characterization of strain S35T, including the 16S rRNA gene sequence and core-genome analysis, the average nucleotide identity (ANIb, ANIm, and orthoANI), and in silico DNA&ndash, DNA hybridization (GGDC), as well as the phenotypic and chemotaxonomic characterization. It grew at 3%&ndash, 20% (w/v) NaCl, pH 6&ndash, 10, and 10&ndash, 42 °, C, with optimum growth at 7.0%&ndash, 7.5% (w/v) NaCl, pH 8.0, and 37 °, C, respectively. Strain S35T was oxidase- and catalase-positive, able to produce acid from D-glucose and other carbohydrates. Hydrolysis of DNA, methyl red test, and nitrate and nitrite reduction were positive. Its main fatty acids were C16:0, C16:1 &omega, 7c and C16:1 &omega, 6c, and C18:1 &omega, 7c and/or C18:1 &omega, 6c. ANI, GGDC, and core-genome analysis determined that strain S35T constitutes a novel species of the genus Salinivibrio, for which the name Salinivibrio socompensis sp. nov. is proposed. The type strain is S35T (= CECT 9634T = BNM 0535T).
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- 2019
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32. Prokaryotic diversity and biogeochemical characteristics of benthic microbial ecosystems at La Brava, a hypersaline lake at Salar de Atacama, Chile
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Maria Eugenia Farias, Kimberley L. Gallagher, Fernando Novoa, Pieter T. Visscher, María Cecilia Rasuk, Manuel Contreras, Daniel Gustavo Poire, Ana Fernández, and Daniel Kurth
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0301 basic medicine ,Geologic Sediments ,Salinity ,Carbonates ,Marine and Aquatic Sciences ,lcsh:Medicine ,Ecosistemas ,Crenarchaeota ,Microbial mat ,Chile ,lcsh:Science ,Multidisciplinary ,Ecology ,biology ,Microbiota ,Planctomycetes ,Biodiversity ,Chemistry ,Metals ,Benthic zone ,Physical Sciences ,Sunlight ,Water Microbiology ,Research Article ,Freshwater Environments ,Chemical Elements ,Biogeochemical cycle ,030106 microbiology ,Sulfides ,Cyanobacteria ,Ecosystems ,03 medical and health sciences ,Microbial Ecosystems ,Ciencias Naturales ,Ecosystem ,Bacteria ,Ecology and Environmental Sciences ,lcsh:R ,Chemical Compounds ,Organisms ,Aquatic Environments ,Biology and Life Sciences ,Biogeochemistry ,Hypersaline lake ,Bodies of Water ,biology.organism_classification ,Oxygen ,Lakes ,Earth Sciences ,Environmental science ,lcsh:Q ,Archaea - Abstract
Benthic microbial ecosystems of Laguna La Brava, Salar de Atacama, a high altitude hypersaline lake, were characterized in terms of bacterial and archaeal diversity, biogeochem-istry, (including O2 and sulfide depth profiles and mineralogy), and physicochemical characteristics. La Brava is one of several lakes in the Salar de Atacama where microbial communities are growing in extreme conditions, including high salinity, high solar insolation, and high levels of metals such as lithium, arsenic, magnesium, and calcium. Evaporation creates hypersaline conditions in these lakes and mineral precipitation is a characteristic geomicrobiological feature of these benthic ecosystems. In this study, the La Brava non-lithifying microbial mats, microbialites, and rhizome-associated concretions were compared to each other and their diversity was related to their environmental conditions. All the ecosystems revealed an unusual community where Euryarchaeota, Crenarchaeota, Acetothermia, Firmicutes and Planctomycetes were the most abundant groups, and cyanobacteria, typically an important primary producer in microbial mats, were relatively insignificant or absent. This suggests that other microorganisms, and possibly novel pathways unique to this system, are responsible for carbon fixation. Depth profiles of O2 and sulfide showed active production and respiration. The mineralogy composition was calcium carbonate (as aragonite) and increased from mats to microbialites and rhizome-associated concretions. Halite was also present. Further analyses were performed on representative microbial mats and microbialites by layer. Different taxonomic compositions were observed in the upper layers, with Archaea dominating the non-lithifying mat, and Planctomycetes the microbialite. The bottom layers were similar, with Euryarchaeota, Crenarchaeota and Planctomycetes as dominant phyla. Sequences related to Cyanobacteria were very scarce. These systems may contain previously uncharacterized community metabolisms, some of which may be contributing to net mineral precipitation. Further work on these sites might reveal novel organisms and metabolisms of biotechnological interest., Centro de Investigaciones Geológicas
- Published
- 2017
33. The genomic sequence of Exiguobacterium chiriqhucha str. N139 reveals a species that thrives in cold waters and extreme environmental conditions
- Author
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Enrique Merino, Mariana Reyes-Prieto, Andrés Moya, Ana Gutiérrez-Preciado, Amparo Latorre, Jorge Valdivia-Anistro, Valeria Souza, Andrés Saralegui, Maria Eugenia Farias, Diego Santos-Garcia, Tania Rosas-Pérez, Omar Federico Ordoñez, Eria A. Rebollar, Carlos Vargas-Chávez, AgroParisTech, Institut Cavanilles de Biodiversitat i Biologia Evolutiva (ICBiBE), and Universitat de València (UV)
- Subjects
0301 basic medicine ,megaplasmid ,Bioinformatics ,Otras Ciencias Biológicas ,[SDV]Life Sciences [q-bio] ,Microbial metabolism ,Biodiversity ,lcsh:Medicine ,Genomics ,Tryptophan biosynthesis ,Microbiology High altitude Andean lakes ,Biology ,Subjects Biochemistry ,Genome ,Biochemistry ,Microbiology ,General Biochemistry, Genetics and Molecular Biology ,Ciencias Biológicas ,purl.org/becyt/ford/1 [https] ,03 medical and health sciences ,Extremophiles ,Arsenic resistance ,Exiguobacterium ,Botany ,Extremophile ,purl.org/becyt/ford/1.6 [https] ,genome ,2. Zero hunger ,Whole genome sequencing ,Genetics ,General Neuroscience ,lcsh:R ,General Medicine ,Metals or metalloids ,biology.organism_classification ,High altitude Andean lakes ,030104 developmental biology ,Microbial population biology ,13. Climate action ,UV resistance ,Bacterial metabolism ,General Agricultural and Biological Sciences ,CIENCIAS NATURALES Y EXACTAS - Abstract
We report the genome sequence of Exiguobacterium chiriqhucha str. N139, isolated from a high-altitude Andean lake. Comparative genomic analyses of the Exiguobacterium genomes available suggest that our strain belongs to the same species as the previously reported E. pavilionensis str. RW-2 and Exiguobacterium str. GIC 31. We describe this species and propose the chiriqhucha name to group them. ‘Chiri qhucha’ in Quechua means ‘cold lake’, which is a common origin of these three cosmopolitan Exiguobacteria. The 2,952,588-bp E. chiriqhucha str. N139 genome contains one chromosome and three megaplasmids. The genome analysis of the Andean strain suggests the presence of enzymes that confer E. chiriqhucha str. N139 the ability to grow under multiple environmental extreme conditions, including high concentrations of different metals, high ultraviolet B radiation, scavenging for phosphorous and coping with high salinity. Moreover, the regulation of its tryptophan biosynthesis suggests that novel pathways remain to be discovered, and that these pathways might be fundamental in the amino acid metabolism of the microbial community from Laguna Negra, Argentina. Fil: Gutierrez, Ana. Universidad de Valencia; España Fil: Vargas Chaves, Carlos. Universidad de Valencia; España Fil: Reyes Prieto, Mariana. Universidad de Valencia; España Fil: Ordoñez, Omar Federico. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucuman. Planta Piloto de Procesos Industriales Microbiologicos; Argentina Fil: Santos-García, Diego. Universidad de Valencia; España Fil: Rosas-Pérez, Tania. Universidad de Valencia; España Fil: Valdivia-Anistro, Jorge. Universidad de Valencia; España Fil: Rebollar, Eria A.. Universidad Nacional Autónoma de México; México Fil: Saralegui, Andrés. Universidad Nacional Autónoma de México; México Fil: Moya, Andrés. Universidad de Valencia; España Fil: Merino, Enrique. Universidad Nacional Autónoma de México; México Fil: Farias, Maria Eugenia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucuman. Planta Piloto de Procesos Industriales Microbiologicos; Argentina Fil: Latorre, Amparo. Universidad de Valencia; España Fil: Souza, Valeria. Universidad Nacional Autónoma de México; México
- Published
- 2017
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34. UV-Resistant Actinobacteria from High-Altitude Andean Lakes: Isolation, Characterization and Antagonistic Activities
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Maria Eugenia Farias, María Cecilia Rasuk, Luciano Raúl Portero, Gabriela Mónica Ferrer, Virginia Helena Albarracín, and Daniel Kurth
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0301 basic medicine ,Ultraviolet Rays ,Otras Ciencias Biológicas ,030106 microbiology ,Microbacterium ,Micrococcus ,Biochemistry ,Streptomyces ,UV-B radiation ,Actinobacteria ,Ciencias Biológicas ,03 medical and health sciences ,Botany ,Peru ,Extreme environment ,Micromonospora ,Poly-extremophiles ,Physical and Theoretical Chemistry ,High Altitude Andean Lakes ,biology ,Ecology ,Altitude ,General Medicine ,biology.organism_classification ,Kocuria ,030104 developmental biology ,Water Microbiology ,Rhodococcus ,CIENCIAS NATURALES Y EXACTAS - Abstract
Polyextremophiles are present in a wide variety of extreme environments in which they must overcome various hostile conditions simultaneously such as high UVB radiation, extreme pHs and temperatures, elevated salt and heavy-metal concentration, low-oxygen pressure and scarce nutrients. High-altitude Andean lakes (HAALs; between 2000 and 4000 m) are one example of these kinds of ecosystems suffering from the highest total solar and UVB radiation on Earth where an abundant and diverse polyextremophilic microbiota was reported. In this work, we performed the first extensive isolation of UV-resistant actinobacteria from soils, water, sediments and modern stromatolites at HAALs. Based on the 16S rRNA sequence, the strains were identified as members of the genera Streptomyces, Micrococcus, Nesterenkonia, Rhodococcus, Microbacterium, Kocuria, Arthrobacter, Micromonospora, Blastococcus, Citrococcus and Brevibacterium. Most isolates displayed resistance to multiple environmental stress factors confirming their polyextremophilic nature and were able to produce effective antimicrobial compounds. HAALs constitute a largely unexplored repository of UV-resistant actinobacteria, with high potential for the biodiscovery of novel natural products. Fil: Rasuk, Maria Cecilia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Ferrer, Gabriela Mónica. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Kurth, Daniel German. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Portero, Luciano Raúl. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Farias, Maria Eugenia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Albarracín, Virginia Helena. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina. Universidad Nacional de Tucumán. Facultad de Ciencias Naturales e Instituto Miguel Lillo; Argentina
- Published
- 2016
35. Transition boundaries for protistan species turnover in hypersaline waters of different biogeographic regions
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Dominik Forster, Ramon Rosselló-Móra, Thorsten Stoeck, Maria Eugenia Farias, Merit del Rocio Mora-Ruiz, Sabine Filker, Bernardo González, and Lea Weinisch
- Subjects
0301 basic medicine ,Salinity ,Ecology ,Range (biology) ,Biogeography ,fungi ,Species distribution ,Eukaryota ,Biology ,South America ,Microbiology ,Biological Evolution ,Halophile ,Europe ,03 medical and health sciences ,030104 developmental biology ,Taxon ,Ecosystem ,Endemism ,Ponds ,Ecology, Evolution, Behavior and Systematics ,Phylogeny - Abstract
The identification of environmental barriers which govern species distribution is a fundamental concern in ecology. Even though salt was previously identified as a major transition boundary for micro- and macroorganisms alike, the salinities causing species turnover in protistan communities are unknown. We investigated 4.5 million high-quality protistan metabarcodes (V4 region of the SSU rDNA) obtained from 24 shallow salt ponds (salinities 4%-44%) from South America and Europe. Statistical analyses of protistan community profiles identified four salinity classes, which strongly selected for different protistan communities: 4-9%, 14-24%, 27-36% and 38-44%. The proportion of organisms unknown to science is highest in the 14-24% salinity class, showing that environments within this salinity range are an unappreciated reservoir of as yet undiscovered organisms. Distinct higher-rank taxon groups dominated in the four salinity classes in terms of diversity. As increasing salinities require different cellular responses to cope with salt, our results suggest that different evolutionary lineages of protists have evolved distinct haloadaptation strategies. Salinity appears to be a stronger selection factor for the structuring of protistan communities than geography. Yet, we find a higher degree of endemism in shallow salt ponds compared with less isolated ecosystems such as the open ocean. Thus, rules for biogeographic structuring of protistan communities are not universal, but depend on the ecosystem under consideration.
- Published
- 2016
36. Exiguobacterium pavilionensis str. N139, a halotolerant, UV-B and metal resistant bacteria from a high-altitude Andean lake
- Author
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Maria Eugenia Farias, Diego Santos-Garcia, Carlos Vargas-Chávez, Valeria Souza, Andrés Saralegui, Andrés Moya, Enrique Merino, Ana Gutiérrez-Preciado, Amparo Latorre, Mariana Reyes-Prieto, Eria A. Rebollar, Tania Rosas-Pérez, Omar Federico Ordoñez, and Jorge Valdivia-Anistro
- Subjects
UV resistance ,Resistant bacteria ,Altitude ,biology ,Tryptophan biosynthesis ,Botany ,Microbial metabolism ,Halotolerance ,Extremophile ,Exiguobacterium ,biology.organism_classification ,Microbiology - Abstract
We report the genome sequence of Exiguobacterium pavilionensis str. N139, isolated from a high-altitude Andean lake. The 2,952,588-bp genome contains one chromosome and three megaplasmids. The genome analysis suggests the presence of enzymes that confer E. pavilionensis str. N139 the ability to grow under multiple environmental extreme conditions, including high concentrations of different metals and high ultraviolet B radiation. Moreover, the regulation of its tryptophan biosynthesis suggests that novel pathways remain to be discovered, and that these pathways might be fundamental in the amino acid metabolism of the microbial community from Laguna Negra, Argentina .
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- 2016
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37. Molecular Diversity of Environmental Prokaryotes
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Rafael De Felicio, Marina Scopel, Pedro Leão, Maria Eugenia Farias, Nurhidayu Al-saari, Donato Aranda, Alexandre Rosado, Diego Graças, and Ulisses Nunes da Rocha
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Ecology ,media_common.quotation_subject ,Biology ,Diversity (politics) ,media_common - Abstract
Fil: Rasuk, Maria Cecilia. Consejo Nacional de Investigaciones Cientificas y Tecnicas. Centro Cientifico Tecnologico Conicet - Tucuman. Planta Piloto de Procesos Industriales Microbiologicos; Argentina
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- 2016
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38. KatG, the Bifunctional Catalase of Xanthomonas citri subsp. citri, Responds to Hydrogen Peroxide and Contributes to Epiphytic Survival on Citrus Leaves
- Author
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María Laura Delprato, Maria Veronica Fernandez Zenoff, Ivana Kraiselburd, María Laura Tondo, Maria Eugenia Farias, and Elena G. Orellano
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0301 basic medicine ,Leaves ,Light ,Mutant ,lcsh:Medicine ,Plant Science ,Biochemistry ,Xanthomonas citri ,purl.org/becyt/ford/1 [https] ,Epiphytic Survival ,lcsh:Science ,chemistry.chemical_classification ,Multidisciplinary ,biology ,Plant Anatomy ,Physics ,Electromagnetic Radiation ,KatG ,Oxides ,Catalase ,Enzymes ,Peroxides ,Chemistry ,Citrus canker ,Physical Sciences ,CIENCIAS NATURALES Y EXACTAS ,Research Article ,Citrus sinensis ,Xanthomonas ,Ultraviolet Rays ,Otras Ciencias Biológicas ,030106 microbiology ,Microbiology ,resistance ,Ciencias Biológicas ,03 medical and health sciences ,Ultraviolet Radiation ,purl.org/becyt/ford/1.6 [https] ,Plant Diseases ,Reactive oxygen species ,lcsh:R ,Biofilm ,Chemical Compounds ,Biology and Life Sciences ,Proteins ,Bacteriology ,Hydrogen Peroxide ,Cell Biology ,Gene Expression Regulation, Bacterial ,biology.organism_classification ,radiation ,Plant Leaves ,Oxidative Stress ,Citrus Canker ,chemistry ,Biofilms ,biology.protein ,Enzymology ,lcsh:Q ,Ultraviolet A ,Xanthomonas citri subsp. citri ,Bacterial Biofilms ,Ultraviolet B ,Bacteria ,Catalases - Abstract
Xanthomonas citri subsp. citri (Xcc) is the bacterium responsible for citrus canker. This bacterium is exposed to reactive oxygen species (ROS) at different points during its life cycle, including those normally produced by aerobic respiration or upon exposition to ultraviolet (UV) radiation. Moreover, ROS are key components of the host immune response. Among enzymatic ROS-detoxifying mechanisms, catalases eliminate H2O2, avoiding the potential damage caused by this specie. Xcc genome includes four catalase genes. In this work, we studied the physiological role of KatG, the only bifunctional catalase of Xcc, through the construction and characterization of a modified strain (XcckatG), carrying an insertional mutation in the katG gene. First, we evaluated the involvement of KatG in the bacterial adaptive response to H2O2. XcckatG cultures exhibited lower catalase activity than those of the wild-type strain, and this activity was not induced upon treatment with sub-lethal doses of H2O2. Moreover, the KatG-deficient mutant exhibited decreased tolerance to H2O2 toxicity compared to wild-type cells and accumulated high intracellular levels of peroxides upon exposure to sub-lethal concentrations of H2O2. To further study the role of KatG in Xcc physiology, we evaluated bacterial survival upon exposure to UV-A or UV-B radiation. In both conditions, XcckatG showed a high mortality in comparison to Xcc wild-type. Finally, we studied the development of bacterial biofilms. While structured biofilms were observed for the Xcc wild-type, the development of these structures was impaired for XcckatG. Based on these results, we demonstrated that KatG is responsible for Xcc adaptive response to H2O2 and a key component of the bacterial response to oxidative stress. Moreover, this enzyme plays an important role during Xcc epiphytic survival, being essential for biofilm formation and UV resistance. Fil: Tondo, Maria Laura. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Rosario. Instituto de Biología Molecular y Celular de Rosario. Universidad Nacional de Rosario. Facultad de Ciencias Bioquímicas y Farmacéuticas. Instituto de Biología Molecular y Celular de Rosario; Argentina Fil: Delprato, María Laura. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Rosario. Instituto de Biología Molecular y Celular de Rosario. Universidad Nacional de Rosario. Facultad de Ciencias Bioquímicas y Farmacéuticas. Instituto de Biología Molecular y Celular de Rosario; Argentina Fil: Kraiselburd, Ivana. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Rosario. Instituto de Biología Molecular y Celular de Rosario. Universidad Nacional de Rosario. Facultad de Ciencias Bioquímicas y Farmacéuticas. Instituto de Biología Molecular y Celular de Rosario; Argentina Fil: Fernandez Zenoff, Maria Veronica. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucuman. Planta Piloto de Procesos Industriales Microbiologicos; Argentina Fil: Farias, Maria Eugenia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucuman. Planta Piloto de Procesos Industriales Microbiologicos; Argentina Fil: Orellano, Elena Graciela. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Rosario. Instituto de Biología Molecular y Celular de Rosario. Universidad Nacional de Rosario. Facultad de Ciencias Bioquímicas y Farmacéuticas. Instituto de Biología Molecular y Celular de Rosario; Argentina
- Published
- 2016
39. Structural peculiarities of linear megaplasmid, pLMA1, from Micrococcus luteus interfere with pyrosequencing reads assembly
- Author
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Rolf Daniel, Julian Rafael Dib, Maria Eugenia Farias, Martin Wagenknecht, Friedhelm Meinhardt, and Andrea Thürmer
- Subjects
DNA Replication ,DNA, Bacterial ,Micrococcus repetitive sequences ,Inverted repeat ,Otras Ciencias Biológicas ,Inverted repeats ,INVERTED REPEATS ,Transposases ,Bioengineering ,Iteron ,Applied Microbiology and Biotechnology ,Ciencias Biológicas ,03 medical and health sciences ,Plasmid ,Bacterial Proteins ,TRANSPOSASE ,LINEAR PLASMID ,Gene ,Transposase ,030304 developmental biology ,Genetics ,0303 health sciences ,biology ,030306 microbiology ,DNA replication ,ITERON ,General Medicine ,Sequence Analysis, DNA ,biology.organism_classification ,Original Research Paper ,Micrococcus luteus ,454 SEQUENCING ,Linear plasmid ,454 Sequencing ,MICROCOCCUS REPETITIVE SEQUENCES ,Pyrosequencing ,CIENCIAS NATURALES Y EXACTAS ,Biotechnology ,Plasmids - Abstract
Different strains of Micrococcus luteus, isolated from high-altitude Argentinean wetlands, were recently reported to harbour the linear plasmids pLMA1, pLMH5 and pLMV7, all of which with 5′-covalently attached terminal proteins. The link between pLMA1 and the host’s erythromycin resistance as well as further presumptive qualities prompted us to perform a detailed characterization. When the 454 technology was applied for direct sequencing of gel-purified pLMA1, assembly of the reads was impossible. However, combined Sanger/454 sequencing of cloned pLMA1 fragments, covering altogether 23 kb of the 110-kb spanning plasmid, allowed numerous sequence repeats of varying in lengths to be identified thus rendering an explanation for the above 454 assembly failure. A large number of putative transposase genes were identified as well. Furthermore, a region with five putative iteron sequences is possibly involved in pLMA1 replication. Fil: Wagenknecht, Martin. Westfalische Wilhelms Universitat; Alemania Fil: Dib, Julian Rafael. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Thürmer, Andrea. Universität Göttingen; Alemania Fil: Rolf, Daniel. Universität Göttingen; Alemania Fil: Farias, Maria Eugenia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Meinhardt, Friedhelm. Westfalische Wilhelms Universitat; Alemania
- Published
- 2010
40. First report of linear megaplasmids in the genus Micrococcus
- Author
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Russel T. Hill, Martin Wagenknecht, Maria Eugenia Farias, Julian Rafael Dib, and Friedhelm Meinhardt
- Subjects
DNA, Bacterial ,Exonuclease ,Otras Ciencias Biológicas ,Restriction Mapping ,Micrococcus ,Microbial Sensitivity Tests ,Biology ,Polymerase Chain Reaction ,Microbiology ,Ciencias Biológicas ,Plasmid ,Extreme environment ,Typing ,BOX-PCR ,Molecular Biology ,Genetics ,Altitude ,Terminal protein ,Argentinean high-altitude wetlands ,16S ribosomal RNA ,biology.organism_classification ,Bacterial Typing Techniques ,Erythromycin ,Blotting, Southern ,Restriction enzyme ,Exodeoxyribonucleases ,Linear plasmid ,Wetlands ,biology.protein ,bacteria ,Micrococcus luteus ,CIENCIAS NATURALES Y EXACTAS ,Plasmids - Abstract
High-altitude wetlands (above 4200 m) in the northwest of Argentina are considered pristine and extreme environments. Micrococcus sp. A1, H5, and V7, isolated from such environments, were shown to contain linear megaplasmids, designated pLMA1, pLMH5, and pLMV7, respectively. As known from linear plasmids of other actinomycetes, all three plasmids were resistant to λ exonuclease treatment, which is consistent with having terminal proteins covalently attached to their 5′ DNA ends. Electrophoretic mobility, Southern analysis, and restriction endonuclease patterns revealed pLMA1 and pLMH5 being indistinguishable plasmids, even though they were found in different strains isolated from two distant wetlands – Laguna Azul and Laguna Huaca Huasi. Analysis of 16S rDNA sequences of Micrococcus sp. A1, H5, and V7 suggested a close relationship to Micrococcus luteus. Typing of isolates was performed using fingerprint patterns generated by BOX-PCR. Plasmid-deficient strains, generated from Micrococcus sp. A1, showed a significantly decreased resistance level for erythromycin. Fil: Dib, Julian Rafael. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Wagenknecht, Martin. Westfalische Wilhelms Universitat; Alemania Fil: Hill, Russel T.. University Of Maryland. Biotechnology Institute. Center Of Marine Biotechnology; Estados Unidos Fil: Farias, Maria Eugenia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Meinhardt, Friedhelm. Westfalische Wilhelms Universitat; Alemania
- Published
- 2010
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41. Forged under the Sun: Life and Art of Extremophiles from Andean Lakes
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Maria Eugenia Farias, Virginia Helena Albarracín, and Wolfgang Gärtner
- Subjects
0301 basic medicine ,Salt content ,Ecology ,Stress sensors ,Otras Ciencias Biológicas ,photoreceptors ,General Medicine ,Biology ,Biochemistry ,Ciencias Biológicas ,03 medical and health sciences ,030104 developmental biology ,Botany ,Survival strategy ,lakes ,Damage repair ,Extremophile ,Puna ,Microbial mat ,photobiology ,Physical and Theoretical Chemistry ,CIENCIAS NATURALES Y EXACTAS - Abstract
High-altitude Andean lakes (HAAL) are a treasure chest for microbiological research in South America. Their indigenous microbial communities are exposed to extremely high UV irradiation and to multiple chemical extremes (Arsenic, high salt content, alkalinity). Microbes are found both, free-living or associated into microbial mats with different degrees of mineralization and lithification, including unique modern stromatolites located at 3570 m above sea level. Characterization of these polyextremophilic microbes began only recently, employing morphological and phylogenetic methods as well as high-throughput sequencing and proteomics approach. Aside from providing a general overview on microbial communities, special attention is given to various survival strategies; HAAL's microbes present a complex system of shared genetic and physiological mechanisms (UV-resistome) based on UV photoreceptors and stress sensors with their corresponding response regulators, UV avoidance and protection strategies, damage tolerance and UV damage repair. Molecular information will be provided for what is, so far the most studied HAAL molecule, a CPD-Class I photolyase from Acinetobacter Ver3 (Laguna Verde, 4400 m). This work further proposes some strategies that make an appeal for the preservation of HAAL, a highly fragile environment that offers promising and ample research possibilities. Fil: Albarracín, Virginia Helena. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucuman. Planta Piloto de Procesos Industriales Microbiologicos; Argentina. Universidad Nacional de Tucumán. Facultad de Ciencias Naturales e Instituto Miguel Lillo; Argentina Fil: Gärtner, Wolfgang. Max Planck Institute Fur Chemische Energiekonversion; Alemania Fil: Farias, Maria Eugenia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucuman. Planta Piloto de Procesos Industriales Microbiologicos; Argentina
- Published
- 2016
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42. Microbial Diversity in Sediment Ecosystems (Evaporites Domes, Microbial Mats, and Crusts) of Hypersaline Laguna Tebenquiche, Salar de Atacama, Chile
- Author
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Maria Eugenia Farias, Pieter T. Visscher, Ana Fernández, María Cecilia Rasuk, Daniel Gustavo Poire, Antonio Ventosa, Fernando Novoa, Manuel Contreras, Molly M. Patterson, and Universidad de Sevilla. Departamento de Microbiología y Parasitología
- Subjects
0301 basic medicine ,Microbiology (medical) ,Evaporite ,Otras Ciencias Biológicas ,030106 microbiology ,lcsh:QR1-502 ,Biodiversity ,Atacama ,Microbiology ,lcsh:Microbiology ,Ciencias Biológicas ,purl.org/becyt/ford/1 [https] ,03 medical and health sciences ,Microbial mats ,Ciencias Naturales ,Candidate division ,14. Life underwater ,Microbial mat ,Hypersaline lakes ,Concretions ,purl.org/becyt/ford/1.6 [https] ,Original Research ,Endoevaporites ,biology ,Ecology ,Planctomycetes ,Biogeochemistry ,Pyrosequencing ,15. Life on land ,biology.organism_classification ,13. Climate action ,Euryarchaeota ,CIENCIAS NATURALES Y EXACTAS ,Archaea - Abstract
We combined nucleic acid-based molecular methods, biogeochemical measurements, and physicochemical characteristics to investigate microbial sedimentary ecosystems of Laguna Tebenquiche, Atacama Desert, Chile. Molecular diversity, and biogeochemistry of hypersaline microbial mats, rhizome-associated concretions, and an endoevaporite were compared with: The V4 hypervariable region of the 16S rRNA gene was amplified by pyrosequencing to analyze the total microbial diversity (i.e., bacteria and archaea) in bulk samples, and in addition, in detail on a millimeter scale in one microbial mat and in one evaporite. Archaea were more abundant than bacteria. Euryarchaeota was one of the most abundant phyla in all samples, and particularly dominant (97% of total diversity) in the most lithified ecosystem, the evaporite. Most of the euryarchaeal OTUs could be assigned to the class Halobacteria or anaerobic and methanogenic archaea. Planctomycetes potentially also play a key role in mats and rhizome-associated concretions, notably the aerobic organoheterotroph members of the class Phycisphaerae. In addition to cyanobacteria, members of Chromatiales and possibly the candidate family Chlorotrichaceae contributed to photosynthetic carbon fixation. Other abundant uncultured taxa such as the candidate division MSBL1, the uncultured MBGB, and the phylum Acetothermia potentially play an important metabolic role in these ecosystems. Lithifying microbial mats contained calcium carbonate precipitates, whereas endoevoporites consisted of gypsum, and halite. Biogeochemical measurements revealed that based on depth profiles of O2 and sulfide, metabolic activities were much higher in the non-lithifying mat (peaking in the least lithified systems) than in lithifying mats with the lowest activity in endoevaporites. This trend in decreasing microbial activity reflects the increase in salinity, which may play an important role in the biodiversity., Centro de Investigaciones Geológicas
- Published
- 2016
43. Bacterial Diversity in Microbial Mats and Sediments from the Atacama Desert
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Ana Fernández, Daniel Gustavo Poire, Manuel Contreras, Fernando Novoa, María Cecilia Rasuk, Maria Eugenia Farias, and Daniel Kurth
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DNA, Bacterial ,0301 basic medicine ,Geologic Sediments ,Microbial diversity ,Molecular Sequence Data ,030106 microbiology ,Soil Science ,Mats ,Ciencias Biológicas ,Sediments ,03 medical and health sciences ,MICROBIAL MATS ,Biología Celular, Microbiología ,Microbial ecology ,RNA, Ribosomal, 16S ,Extreme environment ,Ecosystem ,Geología ,Microbial mat ,Hypersaline lakes ,Phylogeny ,Ecology, Evolution, Behavior and Systematics ,Atacama Desert ,Bacteria ,Ecology ,biology ,Primary producers ,Phylum ,Bacteroidetes ,Biodiversity ,biology.organism_classification ,Lakes ,Desert Climate ,Proteobacteria ,CIENCIAS NATURALES Y EXACTAS - Abstract
The Atacama Desert has extreme environmental conditions that allow the development of unique microbial communities. The present paper reports the bacterial diversity of microbial mats and sediments and its mineralogical components. Some physicochemical conditions of the water surrounding these ecosystems have also been studied trying to determine their influence on the diversity of these communities. In that way, mats and sediments distributed among different hypersaline lakes located in salt flats of the Atacama Desert were subjected to massive parallel sequencing of the V4 region of the 16S rRNA genes of Bacteria. A higher diversity in sediment than in mat samples have been found. Lakes that harbor microbial mats have higher salinity than lakes where mats are absent. Proteobacteria and/or Bacteroidetes are the major phyla represented in all samples. An interesting item is the finding of a low proportion or absence of Cyanobacteria sequences in the ecosystems studied, suggesting the possibility that other groups may be playing an essential role as primary producers in these extreme environments. Additionally, the large proportion of 16S rRNA gene sequences that could not be classified at the level of phylum indicates potential new phyla present in these ecosystems., Centro de Investigaciones Geológicas
- Published
- 2016
44. High-up: a remote reservoir of microbial extremophiles at Central Andean Wetlands
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Maria Eugenia Farias, Virginia Helena Albarracín, Carolina Belfiore, Rubén D. Piacentini, Daniel Kurth, Omar Federico Ordoñez, Graciela Marisa Salum, and Eduardo Luccini
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Microbiology (medical) ,Otras Ciencias Biológicas ,lcsh:QR1-502 ,Wetland ,Review ,Biology ,Central Andes ,Microbiology ,lcsh:Microbiology ,Ciencias Biológicas ,purl.org/becyt/ford/1 [https] ,stromatolites ,Extremophiles ,Stromatolites ,Bioremediation ,Benthos ,Extremophile ,Ecosystem ,Microbial mat ,Genomes ,purl.org/becyt/ford/1.6 [https] ,extremophiles ,Ecological niche ,geography ,geography.geographical_feature_category ,Ecology ,Microbialites ,Plankton ,Astrobiology ,microbe ,Microbes ,13. Climate action ,CIENCIAS NATURALES Y EXACTAS - Abstract
The Central Andes region displays unexplored ecosystems of shallow lakes and salt flats at mean altitudes of 3700 m. Being isolated and hostile, these so-called “High-Altitude Andean Lakes” (HAAL) are pristine and have been exposed to little human influence. HAAL proved to be a rich source of microbes showing interesting adaptations to life in extreme settings (poly-extremophiles) such as alkalinity, high concentrations of arsenic and dissolved salts, intense dryness, large daily ambient thermal amplitude, and extreme solar radiation levels. This work reviews HAAL microbiodiversity, taking into account different microbial niches, such as plankton, benthos, microbial mats and microbialites. The modern stromatolites and other microbialites discovered recently at HAAL are highlighted, as they provide unique modern—though quite imperfect—analogs of environments proxy for an earlier time in Earth's history (volcanic setting and profuse hydrothermal activity, low atmospheric O2 pressure, thin ozone layer and high UV exposure). Likewise, we stress the importance of HAAL microbes as model poly-extremophiles in the study of the molecular mechanisms underlying their resistance ability against UV and toxic or deleterious chemicals using genome mining and functional genomics. In future research directions, it will be necessary to exploit the full potential of HAAL poly-extremophiles in terms of their biotechnological applications. Current projects heading this way have yielded detailed molecular information and functional proof on novel extremoenzymes: i.e., DNA repair enzymes and arsenic efflux pumps for which medical and bioremediation applications, respectively, are envisaged. But still, much effort is required to unravel novel functions for this and other molecules that dwell in a unique biological treasure despite its being hidden high up, in the remote Andes. Fil: Albarracín, Virginia Helena. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucuman. Planta Piloto de Procesos Industriales Microbiologicos; Argentina Fil: Kurth, Daniel German. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucuman. Planta Piloto de Procesos Industriales Microbiologicos; Argentina Fil: Ordoñez, Omar Federico. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucuman. Planta Piloto de Procesos Industriales Microbiologicos; Argentina Fil: Belfiore, Carolina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucuman. Planta Piloto de Procesos Industriales Microbiologicos; Argentina Fil: Luccini, Eduardo Alfredo. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba; Argentina. Pontificia Universidad Católica Argentina "Santa María de los Buenos Aires". Facultad de Química e Ingeniería-Rosario; Argentina Fil: Salum, Graciela Marisa. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Rosario. Instituto de Física de Rosario. Universidad Nacional de Rosario. Instituto de Física de Rosario; Argentina Fil: Piacentini, Ruben Dario Narciso. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Rosario. Instituto de Física de Rosario. Universidad Nacional de Rosario. Instituto de Física de Rosario; Argentina. Universidad Nacional de Rosario. Facultad de Ciencias Exactas, Ingeniería y Agrimensura; Argentina. Universidad Tecnológica Nacional. Facultad Regional Concepción del Uruguay; Argentina Fil: Farias, Maria Eugenia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucuman. Planta Piloto de Procesos Industriales Microbiologicos; Argentina
- Published
- 2015
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45. Water and Flamingo Feces Bacterial Communities from High- Altitude Andean Lakes under Selective Antibiotic Pressure Studied by PCR-DGGE Analyses
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Anna Neumann, Maria Eugenia Farias, María C. Estévez, María V. Fernández-Zenoff, and Julian Rafael Dib
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education.field_of_study ,biology ,Habitat ,Ecology ,Population ,Biota ,Bacterioplankton ,Stenotrophomonas ,biology.organism_classification ,education ,Bacteria ,Feces ,Actinobacteria - Abstract
High-altitude Andean lakes are exposed to extreme environmental factors like high salin‐ ity, ultraviolet radiation, heavy metals, among others. As it was previously shown, these lakes are not only the habitat of a high diversity of bacteria with multiple resistances; they also support an enormous population of flamingos, which migrate among these wet‐ lands, and they could play a role as disseminators and/or reservoirs of pathogenic bacte‐ ria. The aim of this work was to analyze, by Denaturant Gradient Gel Electrophoresis, the bacterial population under selective antibiotic pressure from bacterioplankton and fla‐ mingo feces from three lakes, placed between altitudes 4,200 and 4,560 m. Almost all bands were present in antibiotic-enriched cultures. Several bands identified in water were found in feces as well, presenting mainly correspondence with Gamma-proteobacte‐ ria. Few bands were exclusively identified in water, and those presenting correspondence with Alfa-proteobacteria and Actinobacteria were only identified in Laguna Azul. This study established that flamingos’ enteric biota is in close interaction with lake water and demonstrated that bacteria with the ability to grow in antibiotics are abundant and diverse in the microbiota of Andean lakes. Additionally, flamingos could be considered as vectors of pathogenic organisms, since Stenotrophomonas seem to be the widest spread bacteria in the studied lakes.
- Published
- 2015
46. Halopeptonella vilamensis gen. nov, sp. nov., a halophilic strictly aerobic bacterium of the family Ectothiorhodospiraceae
- Author
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Maria Eugenia Farias, Claudia Elizabeth Viera, Rodolfo Javier Menes, and Manfredo J. Seufferheld
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0301 basic medicine ,DNA, Bacterial ,Otras Ciencias Biológicas ,030106 microbiology ,Microbiology ,Ciencias Biológicas ,03 medical and health sciences ,chemistry.chemical_compound ,Bacterial Proteins ,RNA, Ribosomal, 16S ,Botany ,HYPERSALINE ,Yeast extract ,ECTOTHIORHODOSPIRACEAE ,Phylogeny ,AEROBIC ,Base Composition ,ANDEAN LAKES ,Strain (chemistry) ,biology ,HALOPEPTONELLA ,General Medicine ,Hypersaline lake ,16S ribosomal RNA ,biology.organism_classification ,Halophile ,chemistry ,Tryptone ,HALOPHILE ,Molecular Medicine ,Ectothiorhodospiraceae ,Energy source ,CIENCIAS NATURALES Y EXACTAS - Abstract
A Gram-negative, halophilic, heterotrophic, rod-shaped, non-spore-forming bacterium (SV525T) was isolated from the sediment of a hypersaline lake located at 4600 m above sea level (Laguna Vilama, Argentina). Strain SV525T was strictly aerobic and formed pink-to-magenta colonies. Growth occurred at 10–35 °C (optimum 25–30 °C), at pH levels 6.0–8.5 (optimum 7.0) and at NaCl concentrations of 7.5–25 % (w/v) with an optimum at 10–15 % (w/v). The strain required sodium and magnesium but not potassium ions for growth. Grows with tryptone, or Bacto Peptone as sole carbon and energy source and requires yeast extract for growth. It produced catalase and oxidase. The predominant ubiquinone was Q-8 and the major fatty acids comprised C18:1ω7c, C16:0 and C18:0. The DNA G+C content was 60.4 mol% and its polar lipids consisted of diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine and a phosphoglycolipid. Phylogenetic analysis based on 16S rRNA gene indicated that strain SV525T belongs to the family Ectothiorhodospiraceae within the class Gammaproteobacteria. On the basis of phylogenetic and phenotypic data, SV525T represents a novel genus and species, for which the name Halopeptonella vilamensis gen. nov., sp. nov. is proposed. The type strain is SV525T (=DSM 21056T =JCM 16388T =NCIMB 14596T). Fil: Menes, Rodolfo Javier. Universidad de la Republica Facultad de Quimica; Uruguay Fil: Viera, Claudia Elizabeth. Universidad de la Republica Facultad de Quimica; Uruguay Fil: Farias, Maria Eugenia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucuman. Planta Piloto de Procesos Industriales Microbiologicos; Argentina Fil: Seufferheld, Manfredo Jose. University of Illinois. Urbana - Champaign; Estados Unidos
- Published
- 2015
47. Metagenomic study of red biofilms from Diamante Lake reveals ancient arsenic bioenergetics in haloarchaea
- Author
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Martin P. Vazquez, Nicolás Rascovan, Maria Eugenia Farias, and Javier Maldonado
- Subjects
0301 basic medicine ,Chemoautotrophic Growth ,Arsenites ,Otras Ciencias Biológicas ,Molecular Sequence Data ,Metegenomic ,chemistry.chemical_element ,Microbiology ,Arsenic ,Ciencias Biológicas ,purl.org/becyt/ford/1 [https] ,03 medical and health sciences ,chemistry.chemical_compound ,Crenarchaeota ,Botany ,Diamante ,purl.org/becyt/ford/1.6 [https] ,Phylogeny ,Ecology, Evolution, Behavior and Systematics ,Arsenite ,biology ,Geomicrobiology ,Ecology ,Haloarchaea ,Arsenate ,biology.organism_classification ,Archaea ,Lakes ,030104 developmental biology ,chemistry ,Biofilms ,Arsenates ,Original Article ,Metagenomics ,Euryarchaeota ,Energy Metabolism ,Oxidation-Reduction ,CIENCIAS NATURALES Y EXACTAS - Abstract
Arsenic metabolism is proposed to be an ancient mechanism in microbial life. Different bacteria and archaea use detoxification processes to grow under high arsenic concentration. Some of them are also able to use arsenic as a bioenergetic substrate in either anaerobic arsenate respiration or chemolithotrophic growth on arsenite. However, among the archaea, bioenergetic arsenic metabolism has only been found in the Crenarchaeota phylum. Here we report the discovery of haloarchaea (Euryarchaeota phylum) biofilms forming under the extreme environmental conditions such as high salinity, pH and arsenic concentration at 4589 m above sea level inside a volcano crater in Diamante Lake, Argentina. Metagenomic analyses revealed a surprisingly high abundance of genes used for arsenite oxidation (aioBA) and respiratory arsenate reduction (arrCBA) suggesting that these haloarchaea use arsenic compounds as bioenergetics substrates. We showed that several haloarchaea species, not only from this study, have all genes required for these bioenergetic processes. The phylogenetic analysis of aioA showed that haloarchaea sequences cluster in a novel and monophyletic group, suggesting that the origin of arsenic metabolism in haloarchaea is ancient. Our results also suggest that arsenite chemolithotrophy likely emerged within the archaeal lineage. Our results give a broad new perspective on the haloarchaea metabolism and shed light on the evolutionary history of arsenic bioenergetics. Fil: Rascovan, Nicolas. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Rosario. Instituto de Agrobiotecnología de Rosario; Argentina Fil: Maldonado, Marcos Javier. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucuman. Planta Piloto de Procesos Industriales Microbiologicos; Argentina Fil: Vazquez, Martin Pablo. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Rosario. Instituto de Agrobiotecnología de Rosario; Argentina Fil: Farias, Maria Eugenia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucuman. Planta Piloto de Procesos Industriales Microbiologicos; Argentina
- Published
- 2015
48. Genome comparison of two Exiguobacterium strains from high altitude andean lakes with different arsenic resistance: identification and 3D modeling of the Acr3 efflux pump
- Author
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Omar Federico Ordoñez, Esteban Omar Lanzarotti, Daniel G. Kurth, Néstor eCortez, Maria Eugenia Farias, and Adrian Gustavo Turjanski
- Subjects
Otras Ciencias Biológicas ,chemistry.chemical_element ,Microbiology ,Genome ,SEQUENCE ,Ciencias Biológicas ,purl.org/becyt/ford/1 [https] ,Arsenic resistance ,chemistry.chemical_compound ,Exiguobacterium ,Botany ,Sequencing ,EXIGUOBACTERIUM ,purl.org/becyt/ford/1.6 [https] ,Gene ,ARSENIC RESISTENCE ,lcsh:Environmental sciences ,Arsenic ,General Environmental Science ,Arsenite ,MEMBRANE PROTEINS ,lcsh:GE1-350 ,Genetics ,biology ,Arsenate ,Membrane Proteins ,biology.organism_classification ,Arsenate reductase ,chemistry ,Efflux ,ACR3 ,CIENCIAS NATURALES Y EXACTAS - Abstract
Arsenic exists in natural systems in a variety of chemical forms, including inorganic arsenite (As [III]) and arsenate (As [V]). The majority of living organisms have evolved various mechanisms to avoid occurrence of arsenic inside the cell due to its toxicity. Common core genes include a transcriptional repressor ArsR, an arsenate reductase ArsC, and arsenite efflux pumps ArsB and Acr3. To understand arsenic resistance we have performed arsenic tolerance studies, genomic and bioinformatic analysis of two Exiguobacterium strains, S17 and N139, from the high-altitude Andean Lakes. In these environments high concentrations of arsenic were described in the water due to a natural geochemical phenomenon, therefore, these strains represent an attractive model system for the study of environmental stress and can be readily cultivated. Our experiments show that S17 has a greater tolerance to arsenite (10mM) than N139, but similar growth in arsenate (150mM). We sequenced the genome of the two Exiguobacterium and identified an acr3 gene in S17 as the only difference between both species regarding known arsenic resistance genes. To further understand the Acr3 we modeled the 3D structure and identified the location of relevant residues of this protein. Our model is in agreement with previous experiments and allowed us to identify a region where a relevant cysteine lies. This Acr3 membrane efflux pump, present only in S17, may explain its increased tolerance to As(III) and is the first Acr3-family protein described in Exiguobacterium genus. Fil: Ordoñez, Omar Federico. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Lanzarotti, Esteban Omar. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Química, Física de los Materiales, Medioambiente y Energía. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Química, Física de los Materiales, Medioambiente y Energía; Argentina. Universidad Nacional de Rosario. Facultad de Ciencias Bioquímicas y Farmaceuticas. Departamento de Química Biologica; Argentina Fil: Kurth, Daniel German. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Cortez, Nestor Ricardo. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Rosario. Instituto de Biología Molecular y Celular de Rosario. Universidad Nacional de Rosario. Facultad de Ciencias Bioquímicas y Farmacéuticas. Instituto de Biología Molecular y Celular de Rosario; Argentina Fil: Farias, Maria Eugenia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Turjanski, Adrian. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Química, Física de los Materiales, Medioambiente y Energía. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de Química, Física de los Materiales, Medioambiente y Energía; Argentina. Universidad Nacional de Rosario. Facultad de Ciencias Bioquímicas y Farmaceuticas. Departamento de Química Biologica; Argentina
- Published
- 2015
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- View/download PDF
49. Complete Genome Sequence of the Linear Plasmid pJD12 Hosted by Micrococcus sp. D12, Isolated from a High-Altitude Volcanic Lake in Argentina
- Author
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Maria Eugenia Farias, Julian Rafael Dib, Sonja Voget, Rolf Daniel, Marta Fabiana Gorriti, Wolfgang Liebl, Jörg Schuldes, Johannes Döbber, Friedhelm Meinhardt, and Angel Angelov
- Subjects
Micrococcus ,purl.org/becyt/ford/1 [https] ,Ciencias Biológicas ,03 medical and health sciences ,Altitude ,Plasmid ,Micrococcus sp ,Botany ,Genetics ,Extreme environment ,Prokaryotes ,purl.org/becyt/ford/1.6 [https] ,Molecular Biology ,Gene ,030304 developmental biology ,Whole genome sequencing ,0303 health sciences ,geography ,geography.geographical_feature_category ,biology ,030306 microbiology ,Ecology ,GENOME SEQUENCE ,Bioquímica y Biología Molecular ,equipment and supplies ,biology.organism_classification ,ddc ,Volcano ,bacteria ,PLASMID ,CIENCIAS NATURALES Y EXACTAS ,VOLCANIC LAKE - Abstract
The linear plasmid pDJ12 from Micrococcus D12, isolated from the high-altitude volcanic Diamante Lake in the northwest of Argentina, was completely sequenced and annotated. It is noteworthy that the element is probably conjugative and harbors genes potentially instrumental in coping with stress conditions that prevail in such an extreme environment Fil: Dib, Julian Rafael. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Tucumán. Planta Piloto de Procesos Industriales Microbiológicos (i); Argentina. Universidad Nacional de Tucumán; Argentina Fil: Angelov, Angel. Technische Universitat Munchen; Alemania Fil: Liebl, Wolfang. Technische Universitat Munchen; Alemania Fil: Döbber, Johannes. Westfalische Wilhelms Universitat; Alemania Fil: Voget, Sonja. Georg-August University; Alemania Fil: Schuldes, Jörg. Georg-August University; Alemania Fil: Gorriti, Marta Fabiana. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Tucumán. Planta Piloto de Procesos Industriales Microbiológicos (i); Argentina Fil: Farias, Maria Eugenia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Tucumán. Planta Piloto de Procesos Industriales Microbiológicos (i); Argentina Fil: Meinhardt, Friedhelm. Westfalische Wilhelms Universitat; Alemania Fil: Daniele, Rolf. Georg-August University; Alemania
- Published
- 2015
50. Diverse UV-B Resistance of Culturable Bacterial Community from High-Altitude Wetland Water
- Author
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Judith Heredia, Veronica Fernández Zenoff, Maria Eugenia Farias, Faustino Siñeriz, and Marcela Alejandra Ferrero
- Subjects
Ultraviolet Rays ,Otras Ciencias Biológicas ,Molecular Sequence Data ,BACTERIAL COMMUNITY ,Fresh Water ,Gram-Positive Bacteria ,Radiation Tolerance ,Applied Microbiology and Biotechnology ,Microbiology ,Endospore ,Ciencias Biológicas ,Botany ,Extreme environment ,Ecosystem ,Bacillus megaterium ,WETLANDS ,Staphylococcus saprophyticus ,UV-B RESISTANCE ,Acinetobacter ,biology ,Altitude ,Nocardia ,Pigments, Biological ,Sequence Analysis, DNA ,General Medicine ,biology.organism_classification ,Isolation (microbiology) ,Culture Media ,Microbial population biology ,CIENCIAS NATURALES Y EXACTAS ,Bacteria - Abstract
Isolation of most ultraviolet B (UV-B)-resistant culturable bacteria that occur in the habitat of Laguna Azul, a high-altitude wetland [4554 m above sea level (asl)] from the Northwestern Argentinean Andes, was carried out by culture-based methods. Water from this environment was exposed to UV-B radiation under laboratory conditions during 36 h, at an irradiance of 4.94 W/m2. It was found that the total number of bacteria in water samples decreased; however, most of the community survived long-term irradiation (312 nm) (53.3 kJ/m2). The percentage of bacteria belonging to dominant species did not vary significantly, depending on the number of UV irradiation doses. The most resistant microbes in the culturable community were Gram-positive pigmented species (Bacillus megaterium [endospores and/or vegetative cells], Staphylococcus saprophyticus, and Nocardia sp.). Only one Gram-negative bacterium could be cultivated (Acinetobacter johnsonii). Nocardia sp. that survived doses of 3201 kJ/m2 were the most resistant bacteria to UV-B treatment. This study is the first report on UV-B resistance of a microbial community isolated from high-altitude extreme environments, and proposes a method for direct isolation of UV-B-resistant bacteria from extreme irradiated environments. Fil: Fernandez Zenoff, Maria Veronica. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Heredia, Judith. Universidad Nacional de Tucumán; Argentina Fil: Ferrero, Marcela Alejandra. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina Fil: Siñeriz, Faustino. Universidad Nacional de Tucumán; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina Fil: Farias, Maria Eugenia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Planta Piloto de Procesos Industriales Microbiológicos; Argentina
- Published
- 2006
- Full Text
- View/download PDF
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