1. The use of denaturing solution as collection and transport media to improve SARS-CoV-2 RNA detection and reduce infection of laboratory personnel
- Author
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Sarah A. R. Sérgio, Juliano de Paula Souza, Santuza M. R. Teixeira, Maria Marta Figueiredo, Ronaldo B. Martins, Pedro Augusto Alves, Ana Paula Salles Moura Fernandes, Flávio Guimarães da Fonseca, Alex F. Carvalho, Raissa Prado Rocha, Hugo Itaru Sato, Eurico Arruda, Larissa Vuitika, Flávia Fonseca Bagno, Thaís Santos Silva, and Andreza Parreiras Gonçalves
- Subjects
Oropharyngeal swab ,Protein Denaturation ,medicine.medical_specialty ,Coronavirus disease 2019 (COVID-19) ,COVID-19 diagnostics ,RNA Stability ,viruses ,Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) ,Laboratory personnel ,Genome, Viral ,Biology ,Bacterial, Fungal and Virus Molecular Biology - Research Paper ,Real-Time Polymerase Chain Reaction ,Microbiology ,Virus ,Specimen Handling ,03 medical and health sciences ,COVID-19 Testing ,Medical microbiology ,Media Technology ,medicine ,Humans ,Viral rna ,Viral transport ,Diagnostic laboratory ,030304 developmental biology ,Infectivity ,0303 health sciences ,Sampling solution ,Global challenges ,business.industry ,SARS-CoV-2 ,Diagnostic Tests, Routine ,030306 microbiology ,COVID-19 ,RNA ,CARGA VIRAL ,Virology ,Real-time polymerase chain reaction ,RNA, Viral ,Sample collection ,business ,RNA integrity - Abstract
BackgroundSince the emergence of the COVID-19, health officials have struggled to devise strategies to counteract the speed of the pandemic’s spread across the globe. It became imperative to implement accurate diagnostic tests for the detection of SARS-CoV-2 RNA on respiratory samples. In many places, however, besides the limited availability of test reagents, laboratory personnel face the challenge of adapting their working routines to manipulate highly infective clinical samples. Here, we proposed the use of a virus-inactivating solution as part of a sample collection kit to decrease the infectious potential of the collected material without affecting the integrity of RNA samples used in diagnostic tests based on RT-qPCR.MethodsNasopharyngeal and oropharyngeal swab samples were collected from SARS-CoV-2-infected patients and from laboratory personnel using a commercially available viral transport solution (VTM) and the denaturing solution (DS) described here. RNA extracted from all samples was tested by RT-qPCR using probes for viral and human genes. Exposure of laboratory personnel to infective viruses was also accessed using ELISA tests.FindingsThe use of the DS did not interfere with the detection of viral genome or the endogenous human mRNA, since similar results were obtained from samples collected with VTM or DS. In addition, all tests of laboratory personnel for the presence of viral RNA and IgG antibodies against SARS-CoV-2 were negative.InterpretationThe methodology described here provides a strategy that allow high diagnostic accuracy as well as safe manipulation of clinical samples by those involved with diagnostic procedures.FundingCAPES, FAPEMIG, CNPq, MCTIC, FIOCRUZ and the UK Global Challenges Research Fund (GCRF).
- Published
- 2021
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