1. Identification of a novel endogenous long non-coding RNA that inhibits selenoprotein P translation
- Author
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Yuichiro Mita, Toshifumi Inada, Takashi Toyama, Tadashi Yokooji, Kohei Kishi, Takayuki Hoshi, Sayuri Yasuhara, Noriko Noguchi, Yoshiro Saito, Yoshitaka Matsuo, Risa Uchida, Yasuomi Urano, and Yoshino Shirakawa
- Subjects
Untranslated region ,AcademicSubjects/SCI00010 ,Down-Regulation ,Biology ,Catechin ,03 medical and health sciences ,0302 clinical medicine ,Cell Line, Tumor ,Selenoprotein P ,Genetics ,Humans ,RNA, Messenger ,Gene ,Molecular Biology ,030304 developmental biology ,chemistry.chemical_classification ,0303 health sciences ,Messenger RNA ,RNA ,RNA-Binding Proteins ,Non-coding RNA ,Stop codon ,Cell biology ,chemistry ,Gene Expression Regulation ,Protein Biosynthesis ,RNA, Long Noncoding ,Selenoprotein ,030217 neurology & neurosurgery - Abstract
Selenoprotein P (SELENOP) is a major plasma selenoprotein that contains 10 Sec residues, which is encoded by the UGA stop codon. The mRNA for SELENOP has the unique property of containing two Sec insertion sequence (SECIS) elements, which is located in the 3′ untranslated region (3′UTR). Here, we coincidentally identified a novel gene, CCDC152, by sequence analysis. This gene was located in the antisense region of the SELENOP gene, including the 3′UTR region in the genome. We demonstrated that this novel gene functioned as a long non-coding RNA (lncRNA) that decreased SELENOP protein levels via translational rather than transcriptional, regulation. We found that the CCDC152 RNA interacted specifically and directly with the SELENOP mRNA and inhibited its binding to the SECIS-binding protein 2, resulting in the decrease of ribosome binding. We termed this novel gene product lncRNA inhibitor of SELENOP translation (L-IST). Finally, we found that epigallocatechin gallate upregulated L-IST in vitro and in vivo, to suppress SELENOP protein levels. Here, we provide a new regulatory mechanism of SELENOP translation by an endogenous long antisense ncRNA., Graphical Abstract Graphical AbstractL-IST directly interacts with SELENOP mRNA, inhibits the binding of SECIS-binding protein 2 (SBP2) and ribosome to SELENOP mRNA, and finally decreases SELENOP protein expression. Epigallocatechin gallate (EGCg) upregulated L-IST to suppress SELENOP protein levels.
- Published
- 2021