1. CXM: A New Tool for Mapping Breast Cancer Risk in the Tumor Microenvironment
- Author
-
Howard J. Jacob, Peter S. LaViolette, James D. Shull, Jozef Lazar, Zelmira Lazarova, Sophia Ran, Carol Moreno, Ishan Roy, Jeffery De Pons, Aron M. Geurts, Wenfang Tan, Scott C. Fahrenkrug, Angela Lemke, Allison B. Sarkis, Michael J. Flister, Daniel F. Carlson, Michael B. Dwinell, Paula E. North, Stephanie Santarriaga, Shirng-Wern Tsaih, Nathan P. Rudemiller, and Bradley T. Endres
- Subjects
Male ,Risk ,Cancer Research ,Pathology ,medicine.medical_specialty ,9,10-Dimethyl-1,2-benzanthracene ,Quantitative Trait Loci ,Transplantation, Heterologous ,Breast Neoplasms ,Biology ,Article ,Germline ,Metastasis ,Breast cancer ,Cell Line, Tumor ,Tumor Microenvironment ,medicine ,Animals ,Humans ,Lymphangiogenesis ,Tumor microenvironment ,medicine.disease ,Rats ,Transplantation ,Oncology ,Tumor progression ,Cancer cell ,Cancer research ,Female ,Neoplasm Transplantation - Abstract
The majority of causative variants in familial breast cancer remain unknown. Of the known risk variants, most are tumor cell autonomous, and little attention has been paid yet to germline variants that may affect the tumor microenvironment. In this study, we developed a system called the Consomic Xenograft Model (CXM) to map germline variants that affect only the tumor microenvironment. In CXM, human breast cancer cells are orthotopically implanted into immunodeficient consomic strains and tumor metrics are quantified (e.g., growth, vasculogenesis, and metastasis). Because the strain backgrounds vary, whereas the malignant tumor cells do not, any observed changes in tumor progression are due to genetic differences in the nonmalignant microenvironment. Using CXM, we defined genetic variants on rat chromosome 3 that reduced relative tumor growth and hematogenous metastasis in the SS.BN3IL2Rγ consomic model compared with the SSIL2Rγ parental strain. Paradoxically, these effects occurred despite an increase in the density of tumor-associated blood vessels. In contrast, lymphatic vasculature and lymphogenous metastasis were unaffected by the SS.BN3IL2Rγ background. Through comparative mapping and whole-genome sequence analysis, we narrowed candidate variants on rat chromosome 3 to six genes with a priority for future analysis. Collectively, our results establish the utility of CXM to localize genetic variants affecting the tumor microenvironment that underlie differences in breast cancer risk. Cancer Res; 74(22); 6419–29. ©2014 AACR.
- Published
- 2014
- Full Text
- View/download PDF