1. An intrinsically disordered radish vacuolar calcium-binding protein (RVCaB) showed cryoprotective activity for lactate dehydrogenase with its hydrophobic region
- Author
-
Yui Sunano, Masakazu Hara, and Honami Osuda
- Subjects
Raphanus sativus 54 L ,Raphanus ,Dehydrin ,Taproot ,02 engineering and technology ,Biochemistry ,Vacuolar calcium-binding protein ,03 medical and health sciences ,chemistry.chemical_compound ,Structural Biology ,Tandem Mass Spectrometry ,Lactate dehydrogenase ,Calcium-binding protein ,Sodium dodecyl sulfate ,Molecular Biology ,Polyacrylamide gel electrophoresis ,030304 developmental biology ,chemistry.chemical_classification ,0303 health sciences ,Intrinsically disordered proteins ,Molecular mass ,biology ,L-Lactate Dehydrogenase ,Chemistry ,Calcium-Binding Proteins ,General Medicine ,021001 nanoscience & nanotechnology ,biology.organism_classification ,Cryoprotection ,Amino acid ,Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization ,Vacuoles ,0210 nano-technology ,Hydrophobic and Hydrophilic Interactions - Abstract
A soluble protein fraction from radish (Raphanus sativus L.) taproot had cryoprotective activity for lactate dehydrogenase (LDH). The activity was found mainly in the heat-stable fractions of soluble proteins. The cryoprotective protein, whose molecular mass was 43 kDa in sodium dodecyl sulfate polyacrylamide gel electrophoresis, was obtained by successive chromatographies on TOYOPEARL SuperQ and TOYOPEARL DEAE. MALDI-TOF MS/MS analysis indicated that the purified protein was a radish vacuolar calcium-binding protein (RVCaB), which is reportedly related to calcium storage in the vacuoles of radish taproot. The purified RVCaB inhibited the cryoinactivation, cryodenaturation, and cryoaggregation of LDH. RVCaB had greater cryoprotective activity than general cryoprotectants. When RVCaB was divided into 15 segments (Seg01 to Seg15, 15 amino acids each), Seg03, which had a high hydrophobicity scale, showed remarkable cryoprotective activity. This indicated that RVCaB protected LDH from freezing and thawing damage presumably through a specific hydrophobic area (i.e., Seg03).
- Published
- 2021