6 results on '"Dashnor Nebija"'
Search Results
2. Secondary metabolite dereplication and phylogenetic analysis identify various emerging mycotoxins and reveal the high intra-species diversity in Aspergillus flavus
- Author
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Valdet Uka, Geromy G. Moore, Natalia Arroyo-Manzanares, Dashnor Nebija, Sarah De Saeger, and José Diana Di Mavungu
- Subjects
Microbiology (medical) ,GENE-CLUSTER ,FUNGAL METABOLITES ,CYCLOPIAZONIC ACID ,lcsh:QR1-502 ,Aspergillus flavus ,Fungus ,REDUCE AFLATOXIN CONTAMINATION ,SEXUAL REPRODUCTION ,Secondary metabolite ,Microbiology ,lcsh:Microbiology ,spectrometry ,03 medical and health sciences ,NATURAL-PRODUCTS ,medicine ,Secondary metabolism ,chemical diversity ,mass spectrometry ,030304 developmental biology ,Genetics ,0303 health sciences ,Aspergillus ,Genetic diversity ,VEGETATIVE COMPATIBILITY GROUPS ,biology ,Phylogenetic tree ,030306 microbiology ,food and beverages ,Biology and Life Sciences ,MASS-SPECTROMETRY ,genetic diversity ,biology.organism_classification ,Sexual reproduction ,sexuality ,mass ,HIGH-RESOLUTION ,MULTIPLE MYCOTOXINS ,medicine.drug - Abstract
Aspergillus flavus is one of the most important mycotoxigenic species from the genus Aspergillus, due to its ability to synthesize the potent hepatocarcinogen, aflatoxin B-1. Moreover, this fungus is capable of producing several other toxic metabolites from the class of indole-tetramates, non-ribosomal peptides, and indole-diterpenoids. Populations of A. flavus are characterized by considerable diversity in terms of morphological, functional and genetic features. Although for many years A. flavus was considered an asexual fungus, researchers have shown evidence that at best these fungi can exhibit a predominantly asexual existence. We now know that A. flavus contains functional genes for mating, uncovering sexuality as potential contributor for its diversification. Based on our results, we reconfirm that A. flavus is a predominant producer of B-type aflatoxins. Moreover, this fungus can decisively produce AFM(1) and AFM(2). We did not observe any clear relationship between mating-type genes and particular class of metabolites, probably other parameters such as sexual/asexual ratio should be investigated. A dynamic secondary metabolism was found also in strains intended to be used as biocontrol agents. In addition we succeeded to provide mass spectrometry fragmentation spectra for the most important classes of A. flavus metabolites, which will serve as identification cards for future studies. Both, metabolic and phylogenetic analysis proved a high intra-species diversity for A. flavus. These findings contribute to our understanding about the diversity of Aspergillus section Flavi species, raising the necessity for polyphasic approaches (morphological, metabolic, genetic, etc.) when dealing with this type of complex group of species.
- Published
- 2019
3. Essential Oil Composition ofPinus peuceGriseb. Needles and Twigs from Two National Parks of Kosovo
- Author
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Avni Hajdari, Zeqir Veselaj, Dashnor Nebija, Hyrmete Selimi, Johannes Novak, Behxhet Mustafa, Cassandra L. Quave, and Pranvera Breznica
- Subjects
Article Subject ,Parks, Recreational ,Kosovo ,Population ,lcsh:Medicine ,Biology ,lcsh:Technology ,01 natural sciences ,Gas Chromatography-Mass Spectrometry ,General Biochemistry, Genetics and Molecular Biology ,law.invention ,Steam distillation ,Dry weight ,law ,Botany ,Oils, Volatile ,lcsh:Science ,education ,Chemical composition ,Essential oil ,General Environmental Science ,education.field_of_study ,lcsh:T ,010405 organic chemistry ,National park ,lcsh:R ,General Medicine ,Pinus peuce ,Pinus ,biology.organism_classification ,0104 chemical sciences ,010404 medicinal & biomolecular chemistry ,Pinaceae ,lcsh:Q ,Research Article - Abstract
The principal aim of this study was to analyze the chemical composition and qualitative and quantitative variability of essential oils obtained from seven naturally grown populations of thePinus peuceGrisebach, Pinaceae in Kosovo. Plant materials were collected from three populations in the Sharri National Park and from four other populations in the Bjeshkët e Nemuna National Park, in Kosovo. Essential oils were obtained by steam distillation and analyzed by GC-FID (Gas Chromatography-Flame Ionization Detection) and GC-MS (Gas Chromatography-Mass Spectrometry). The results showed that the yield of essential oils (v/wdry weight) varied depending on the origin of population and the plant organs and ranged from 0.7 to 3.3%. In total, 51 compounds were identified. The main compounds wereα-pinene (needles: 21.6–34.9%; twigs: 11.0–24%),β-phellandrene (needles: 4.1–27.7; twigs: 29.0–49.8%), andβ-pinene (needles: 10.0–16.1; twigs: 6.9–20.7%). HCA (Hierarchical Cluster Analysis) and PCA (Principal Component Analyses) were used to assess geographical variations in essential oil composition. Statistical analysis showed that the analyzed populations are grouped in three main clusters which seem to reflect microclimatic conditions on the chemical composition of the essential oils.
- Published
- 2016
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4. Chemical Composition ofJuniperus communisL. Cone Essential Oil and Its Variability among Wild Populations in Kosovo
- Author
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Elheme Miftari, Cassandra L. Quave, Dashnor Nebija, Behxhet Mustafa, Johannes Novak, and Avni Hajdari
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Cupressaceae ,Kosovo ,Population ,Sabinene ,Bioengineering ,Biochemistry ,law.invention ,chemistry.chemical_compound ,Dry weight ,law ,Botany ,Oils, Volatile ,Cluster Analysis ,Plant Oils ,education ,Molecular Biology ,Chemical composition ,Essential oil ,Principal Component Analysis ,education.field_of_study ,biology ,Chemotype ,General Chemistry ,General Medicine ,biology.organism_classification ,chemistry ,Juniperus ,Juniperus communis ,Molecular Medicine - Abstract
Ripe cones of Juniperus communis L. (Cupressaceae) were collected from five wild populations in Kosovo, with the aim of investigating the chemical composition and natural variation of essential oils between and within wild populations. Ripe cones were collected, air dried, crushed, and the essential oils obtained by hydrodistillation. The essential-oil constituents were identified by GC-FID and GC/MS analyses. The yield of essential oil differed depending on the population origins and ranged from 0.4 to 3.8% (v/w, based on the dry weight). In total, 42 compounds were identified in the essential oils of all populations. The principal components of the cone-essential oils were α-pinene, followed by β-myrcene, sabinene, and D-limonene. Taking into consideration the yield and chemical composition, the essential oil originating from various collection sites in Kosovo fulfilled the minimum requirements for J. communis essential oils of the European Pharmacopoeia. Hierarchical cluster analysis (HCA) and principal component analysis (PCA) were used to determine the influence of the geographical variations on the essential-oil composition. These statistical analyses suggested that the clustering of populations was not related to their geographic location, but rather appeared to be linked to local selective forces acting on the chemotype diversity.
- Published
- 2015
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5. Unravelling the Diversity of the Cyclopiazonic Acid Family of Mycotoxins in Aspergillus flavus by UHPLC Triple-TOF HRMS
- Author
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Dashnor Nebija, Valdet Uka, José Diana Di Mavungu, Sarah De Saeger, Geromy G. Moore, and Natalia Arroyo-Manzanares
- Subjects
0301 basic medicine ,Aflatoxin ,GENE-CLUSTER ,Indoles ,Health, Toxicology and Mutagenesis ,Metabolite ,RECOMBINATION ,lcsh:Medicine ,Aspergillus flavus ,HRMS ,Toxicology ,Tandem mass spectrometry ,01 natural sciences ,cyclopiazonic acid ,chemistry.chemical_compound ,Tandem Mass Spectrometry ,heterocyclic compounds ,Chromatography, High Pressure Liquid ,Penicillium cyclopium ,Molecular Structure ,OXINDOLE ALKALOIDS ,food and beverages ,Dereplication ,dereplication ,Chemistry ,Biochemistry ,cardiovascular system ,Cyclopiazonic acid ,PENICILLIUM-CYCLOPIUM ,PKS-NRPS ,Neurotoxins ,REDUCE AFLATOXIN CONTAMINATION ,Fungus ,Biology ,Article ,03 medical and health sciences ,ergot-like alkaloid ,Alkaloids ,BIOSYNTHESIS ,Mycotoxin ,ORYZAE ,010405 organic chemistry ,lcsh:R ,Biology and Life Sciences ,Ergot-like alkaloid ,MASS-SPECTROMETRY ,Mycotoxins ,biology.organism_classification ,0104 chemical sciences ,030104 developmental biology ,SECONDARY METABOLITES ,chemistry - Abstract
Cyclopiazonic acid (α-cyclopiazonic acid, α-CPA) is an indole-hydrindane-tetramic acid neurotoxin produced by various fungal species, including the notorious food and feed contaminant Aspergillus flavus. Despite its discovery in A. flavus cultures approximately 40 years ago, its contribution to the A. flavus mycotoxin burden is consistently minimized by our focus on the more potent carcinogenic aflatoxins also produced by this fungus. Here, we report the screening and identification of several CPA-type alkaloids not previously found in A. flavus cultures. Our identifications of these CPA-type alkaloids are based on a dereplication strategy involving accurate mass high resolution mass spectrometry data and a careful study of the α-CPA fragmentation pattern. In total, 22 CPA-type alkaloids were identified in extracts from the A. flavus strains examined. Of these metabolites, 13 have been previously reported in other fungi, though this is the first report of their existence in A. flavus. Two of our metabolite discoveries, 11,12-dehydro α-CPA and 3-hydroxy-2-oxo CPA, have never been reported for any organism. The conspicuous presence of CPA and its numerous derivatives in A. flavus cultures raises concerns about the long-term and cumulative toxicological effects of these fungal secondary metabolites and their contributions to the entire A. flavus mycotoxin problem., Valdet Uka was financially supported by Project Basileus V (Erasmus Mundus Action 2) funding from the European Commission.
- Published
- 2017
6. Comparison of aragonitic molluscan shell proteins
- Author
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Dashnor Nebija, Takeshi Furuhashi, Miloslav Smrz, Christian R. Noe, Bettina Germann, Ivan Mikšík, and Bodo Lachmann
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Physiology ,Nucleation ,Shell (structure) ,Biology ,Biochemistry ,Calcium Carbonate ,chemistry.chemical_compound ,Calcification, Physiologic ,Chitin ,Mollusc shell ,Animals ,Electrophoresis, Gel, Two-Dimensional ,Amino Acids ,Molecular Biology ,Mollusca ,Two-dimensional gel electrophoresis ,Proteins ,Hydrogen-Ion Concentration ,biology.organism_classification ,Crystallography ,Solubility ,chemistry ,Chemical engineering ,Macromolecule ,Biomineralization - Abstract
Acidic macromolecules, as a nucleation factor for mollusc shell formation, are a major focus of research. It remains unclear, however, whether acidic macromolecules are present only in calcified shell organic matrices, and which acidic macromolecules are crucial for the nucleation process by binding to chitin as structural components. To clarify these questions, we applied 2D gel electrophoresis and amino acid analysis to soluble shell organic matrices from nacre shell, non-nacre aragonitic shell and non-calcified squid shells. The 2D gel electrophoresis results showed that the acidity of soluble proteins differs even between nacre shells, and some nacre (Haliotis gigantea) showed a basic protein migration pattern. Non-calcified shells also contained some moderately acidic proteins. The results did not support the correlation between the acidity of soluble shell proteins and shell structure.
- Published
- 2010
- Full Text
- View/download PDF
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