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Studies on the impact of ocean acidification on marine organisms involve exposing organisms to future acidification scenarios as projected for open ocean, which has limited relevance for coastal calcifiers. Characterization of reaction norms across a range of pH and identification of tipping points beyond which detrimental effects are observed has been limited and focus on only a few macro-physiological traits. Here we filled this knowledge gap by developing a framework to analyze the broad macro-physiological and molecular responses over a wide pH range of juvenile Pacific oyster, a model species for which the tolerance threshold to acidification remains unknown. We identify low tipping points for physiological traits at pH 7.3-6.9 that coincide with a major reshuffling in membrane lipids and transcriptome. In contrast, shell parameters exhibit effects with pH drop well before tipping points, likely impacting animal fitness. These findings were made possible by the development of an innovative methodology to synthesize and identify the main patterns of variations in large -omic datasets, fit them to pH and identify molecular tipping-points. We propose the application of our framework broadly to the assessment of effects of global change on other organisms.

Ocean deoxygenation is one of the major consequences of climate change. In coastal waters, this process can be exacerbated by eutrophication, which is contributing to an alarming increase in the so-called "dead zones" globally. Despite its severity, the effect of reduced dissolved oxygen has only been studied for a very limited number of organisms, compared to other climate change impacts such as ocean acidification and warming. Here we experimentally assessed the response of sponges to moderate and severe simulated hypoxic events. We ran three laboratory experiments on four species from two different temperate oceans (NE Atlantic and SW Pacific). Sponges were exposed to a total of five hypoxic treatments, with increasing severity (3.3, 1.6, 0.5, 0.4 and 0.13 mg O2 L-1 , over 7-12-days). We found that sponges are generally very tolerant of hypoxia. All the sponges survived in the experimental conditions, except Polymastia crocea, which showed significant mortality at the lowest oxygen concentration (0.13 mg O2 L-1 , lethal median time: 286 h). In all species except Suberites carnosus, hypoxic conditions do not significantly affect respiration rate down to 0.4 mg O2 L-1 , showing that sponges can uptake oxygen at very low concentrations in the surrounding environment. Importantly, sponges displayed species-specific phenotypic modifications in response to the hypoxic treatments, including physiological, morphological, and behavioural changes. This phenotypic plasticity likely represents an adaptive strategy to live in reduced or low oxygen water. Our results also show that a single sponge species (i.e., Suberites australiensis) can display different strategies at different oxygen concentrations. Compared to other sessile organisms, sponges generally showed higher tolerance to hypoxia, suggesting that sponges could be favoured and survive in future deoxygenated oceans.

International audience; Ocean acidification (OA) appears to have diverse impacts on calcareous coccolithophores, but the cellular processes underlying these responses are not well understood. Here we use stable boron and carbon isotopes, B/Ca ratios, as well as inorganic and organic carbon production rates to investigate the carbon utilization and the internal pH regulation at the site of calcification in Emiliania huxleyi, Calcidiscus leptoporus and Pleurochrysis carterae cultured over a wide pCO2 range (180–1000 μatm). Despite large variability, the geochemistry data indicate species-specific modes of pH control and differences in the utilization of inorganic carbon. Boron isotope data suggest that all three species generally upregulate the pH of the calcification fluid (pHCF) compared to surrounding seawater, which coincides with relatively constant growth rates and cellular ratios of inorganic to organic carbon. Furthermore, species exhibit different strategies in regulating their pHCF, i.e., two species maintain homeostasis (pHCF = ∼8.7), while one species shows a constant offset to the surrounding seawater (ΔpH = ∼0.6 units) over the entire tested pCO2 range. In addition to these different strategies, carbon isotope data suggests that high plasticity in the utilization of dissolved inorganic carbon might be an explanation for species-specific differences in coccolithophore responses to OA.

Most research investigating how ocean warming and acidification will impact marine species has focused on visually dominant species, such as kelps and corals, while ignoring visually cryptic species such as crustose coralline algae (CCA). CCA are important keystone species that provide settlement cues for invertebrate larvae and can be highly sensitive to global ocean change. However, few studies have assessed how CCA respond to low emission scenarios or conditions. In a laboratory experiment, we examined the responses of temperate CCA assemblages to combined warming and acidification projected under low, medium, and high emissions. Net calcification and net photosynthesis significantly declined in all emissions scenarios, while significant reductions in relative growth rates and increases in percentage bleaching were observed in the highest emission scenario. The negative responses of CCA to both low and medium emissions suggest that they may be adversely impacted by combined warming and acidification by 2030 if current emissions are sustained. This will have far reaching consequences for commercially important invertebrates that rely on them to induce settlement of larvae. These findings highlight the need to take rapid action to preserve these critical keystone species and the valuable services they provide.

Marine phytoplankton can be highly sensitive to ocean acidification; however, their responses are diverse and therefore, phytoplankton response study on the regional scale is of high research priority. The present study documented the community shift and growth responses of a natural phytoplankton assemblage from the South West coastal water of India (South Eastern Arabian Sea) under ambient CO2 (A-CO2 ≈ 400 µatm) and high CO2 (H-CO2 ≈ 830 µatm) levels in microcosms during the winter monsoon. A doubling of pCO2 resulted in increased cell density, particulate organic carbon and nitrogen (POC, PON) contents, and C:N ratios. The depleted values of δ13CPOC in the H-CO2-incubated cells indicated a higher diffusive CO2 influx. HPLC marker pigment analysis revealed that the community was microphytoplankton dominated (mostly diatoms); nanoplanktonic prymnesiophytic algae and picoplanktonic cyanobacteria showed insignificant response to the simulated ocean acidification. A high CO2-induced increased growth rate was noticed in 6 diatoms (Leptocylindrus danicus; Rhizosolenia setigera; Navicula sp., Asterionella glacialis, Dactyliosolen fragilissimus, and Thalassiosira sp.). The cell volumes of Thalassionema frauenfeldii, Asterionella glacialis, and Cylindrotheca closterium increased significantly, whereas Rhizosolenia setigera and Thalassiosira sp. showed decreased cell volume at the elevated CO2 levels. These changes in growth rate, cell volume, and elemental stoichiometry could be related to CO2 acquisition and the nutritional status of the cells. Some phytoplankton genera from this region are probably acclimatized to pCO2 fluctuations and are likely to benefit from the future increase in CO2 levels. Higher POC production and increased C:N ratio along with variable cell volume may impact the trophic transfer and cycling of organic carbon in this coastal water. However, a multi-stressor approach in a longer experimental exposure should be considered in future research.

Global warming and connected acidification of the world ocean attract a substantial amount of research efforts, in particular in a context of their impact on behaviour and metabolism of marine organisms, such as Cnidaria. Nevertheless, mechanisms underlying Cnidarians’ neural signalling and behaviour and their (possible) alterations due to the world ocean acidification remain poorly understood. Here we researched for the first time modulation of GABAA receptors (GABAARs) in Actinia equina (Cnidaria: Anthozoa) by pH fluctuations within a range predicted by the world ocean acidification scenarios for the next 80–100 years and by selective pharmacological activation. We found that in line with earlier studies on vertebrates, both changes of pH and activation of GABAARs with a selective allosteric agonist (diazepam) modulate electrical charge transfer through GABAAR and the whole-cell excitability. On top of that, diazepam modifies the animal behavioural reaction on startle response. However, despite behavioural reactions displayed by living animals are controlled by GABAARs, changes of pH do not alter them significantly. Possible mechanisms underlying the species resistance to acidification impact are discussed.

Coccolithophores are potentially affected by ongoing ocean acidification, where rising CO2 lowers seawater pH and calcite saturation state (Ωcal). Southern Patagonian fjords and channels provide natural laboratories for studying these issues due to high variability in physical and chemical conditions. We surveyed coccolithophore assemblages in Patagonian fjords during late spring 2015 and early spring 2017. Surface Ωcal exhibited large variations driven mostly by freshwater inputs. High-Ωcal conditions (max. 3.6) occurred in the Archipelago Madre de Dios. Ωcal ranged from 2.0–2.6 in the western Strait of Magellan and 1.5–2.2 in the inner channel and was subsaturating (0.5) in Skyring Sound. Emiliania huxleyi was the only coccolithophore widely distributed in Patagonian fjords (> 96 % of total coccolithophores), only disappearing in the Skyring Sound, a semi-closed mesohaline system. Correspondence analysis associated higher E. huxleyi biomasses with lower diatom biomasses. The highest E. huxleyi abundances in Patagonia were in the lower range of those reported in Norwegian fjords. Predominant morphotypes were distinct from those previously documented in nearby oceans but similar to those of Norwegian fjords. Moderately calcified forms of E. huxleyi A morphotype were uniformly distributed throughout Patagonia fjords. The exceptional R/hyper-calcified coccoliths, associated with low Ωcal values in Chilean and Peruvian coastal upwellings, were a minor component associated with high Ωcal levels in Patagonia. Outlying mean index (OMI) niche analysis suggested that pH and Ωcal conditions explained most variation in the realized niches of E. huxleyi morphotypes. The moderately calcified A morphotype exhibited the widest niche breadth (generalist), while the R/hyper-calcified morphotype exhibited a more restricted realized niche (specialist). Nevertheless, when considering an expanded sampling domain, including nearby southeast Pacific coastal and offshore waters, even the R/hyper-calcified morphotype exhibited a higher niche breadth than other closely phylogenetically related coccolithophore species. The occurrence of E. huxleyi in naturally low pH–Ωcal environments indicates that its ecological response is plastic and capable of adaptation.

Rapid increases in anthropogenic atmospheric CO2 partial pressure have led to a decrease in the pH of seawater. Calcifying organisms generally respond negatively to ocean acidification. Foraminifera are one of the major carbonate producers in the ocean; however, whether calcification reduction by ocean acidification affects either foraminiferal shell volume or density, or both, has yet to be investigated. In this study, we cultured asexually reproducing specimens of Amphisorus kudakajimensis, a dinoflagellate endosymbiont-bearing large benthic foraminifera (LBF), under different pH conditions (pH 7.7–8.3, NBS scale). The results suggest that changes in seawater pH would affect not only the quantity (i.e., shell volume) but also the quality (i.e., shell density) of foraminiferal calcification. We proposed that pH and temperature affect these growth parameters differently because (1) they have differences in the contribution to the calcification process (e.g., Ca2+-ATPase and Ω) and (2) pH mainly affects calcification and temperature mainly affects photosynthesis. Our findings also suggest that, under the IPCC RCP8.5 scenario, both ocean acidification and warming will have a significant impact on reef foraminiferal carbonate production by the end of this century, even in the tropics.

Coralline algae play foundational roles in coastal ecosystems and are globally significant components of benthic habitats down to the limits of the photic zone. Despite their vulnerability to ocean acidification (OA) and importance in low light environments, there is a limited understanding of how the interplay between irradiance and OA influences coralline reproduction and recruitment. To better understand this interaction, a 212 d experiment was run exposing coralline communities to 2 pH levels (present-day pH 8.03, OA pH 7.65) and a gradient of daily light dose (0.35, 0.17 and 0.1 mol m-2 d-1), based on in situ measurements. In the highest light dose treatment, lowered seawater pH projected for 2100 (pH(T) 7.65) reduced recruitment by 56%. This OA-driven reduction in recruitment was amplified under reduced light, with recruitment near zero in the lowest light treatment. This study shows, for the first time, the increased vulnerability of coralline community recruitment to OA under low light. Coralline algae are known to be the deepest growing macroalgae and thus, in these low light zones, OA may have the potential to reduce coralline depth distribution.

In marine ecosystems, fluctuations in surface-seawater carbon dioxide (CO2), significantly influence the whole metabolism of marine algae, especially during the early stages of macroalgal development. In this study, the response of the green alga Ulva fasciata for elevating ocean acidification was investigated using four levels of pCO2 ∼280, 550, 750 and 1050 µatm. Maximum growth rate (6.6 % day-1), protein (32.43 %DW) and pigment (2.9 mg/g) accumulation were observed at pCO2-550 with an increase of ∼2-fold compared to control. On the other hand, lipid and carbohydrate contents recorded their maximum production (4.23 and 46.96 %DW, respectively) at pCO2-750 while control showed 3.70 and 42.37 %DW, respectively. SDS-PAGE showed the presence of unique bands in response to pCO2, especially at 550 µatm. Dominant associated bacteria was shifted from Halomonas hydrothermalis of control to Vibrio toranzoniae at pCO2-1050. These findings suggest that ocean acidification at 550 µatm might impose noticeable effects on growth, protein, pigments, and protein profile of U. fasciata, which could be a good source for fish farming. While, pCO2-750 was recommended for energetic purpose, due to its high lipid and carbohydrate contents.

Background Crustose coralline algae (CCA) are calcifying red macroalgae that play important ecological roles including stabilisation of reef frameworks and provision of settlement cues for a range of marine invertebrates. Previous research into the responses of CCA to ocean warming (OW) and ocean acidification (OA) have found magnitude of effect to be species-specific. Response to OW and OA could be linked to divergent underlying molecular processes across species. Results Here we show Sporolithon durum, a species that exhibits low sensitivity to climate stressors, had little change in metabolic performance and did not significantly alter the expression of any genes when exposed to temperature and pH perturbations. In contrast, Porolithon onkodes, a major coral reef builder, reduced photosynthetic rates and had a labile transcriptomic response with over 400 significantly differentially expressed genes, with differential regulation of genes relating to physiological processes such as carbon acquisition and metabolism. The differential gene expression detected in P. onkodes implicates possible key metabolic pathways, including the pentose phosphate pathway, in the stress response of this species. Conclusions We suggest S. durum is more resistant to OW and OA than P. onkodes, which demonstrated a high sensitivity to climate stressors and may have limited ability for acclimatisation. Understanding changes in gene expression in relation to physiological processes of CCA could help us understand and predict how different species will respond to, and persist in, future ocean conditions predicted for 2100.

The adaptive capacity of marine calcifiers to ocean acidification (OA) is a topic of great interest to evolutionary biologists and ecologists. Previous studies have provided evidence to suggest that larval resilience to high pCO2 seawater for these species is a trait with a genetic basis and variability in natural populations. To date, however, it remains unclear how the selective effects of OA occur within the context of complex genetic interactions underpinning larval development in many of the most vulnerable taxa. Here we evaluated phenotypic and genetic changes during larval development of Pacific oysters (Crassostrea gigas) reared in ambient (~400 µatm) and high (~1600 µatm) pCO2 conditions, both in domesticated and naturalized “wild” oysters from the Pacific Northwest, USA. Using pooled DNA samples, we determined changes in allele frequencies across larval development, from early “D‐stage” larvae to metamorphosed juveniles (spat), in both groups and environments. Domesticated larvae had ~26% fewer loci with changing allele frequencies across developmental stages and

Ocean acidification and eutrophication are two important environmental stressors. They inevitably impact marine macroalgae, and hence the coastal ecosystem of China. Saccharina japonica, as the main culture species in China, is suffering the harmful golden tide caused by Sargassum horneri. However, it remains unclear whether the detrimental effects of S. horneri on S. japonica cultivation become more severe in future acidified and eutrophic scenario. In this study, we respectively investigated the effects of pCO2 (400 µatm and 1000 µatm) and nutrients (non-enriched and enriched seawater) on the growth, photosynthesis, respiration, chlorophyll contents, and tissue nitrogen of S. japonica and S. horneri. Results indicated that enrichment of nutrients contributed S. horneri to utilize HCO3−. The carbon acquisition pathway shifted from HCO3− to CO2 in S. japonica, while S. horneri remained using HCO3− regulated by nutrient enrichment. S. horneri exhibited better photosynthetic traits than S. japonica, with a higher level of net photosynthetic rate and chlorophyll contents at elevated pCO2 and enriched nutrients. Tissue nitrogen also accumulated richly in the thalli of S. horneri under higher pCO2 and nutrients. Significant enhancement in growth was only detected in S. horneri under synergistic stress. Together, S. horneri showed competitive dominance in current study. These findings suggest that increasing risk of golden tide in acidified and eutrophic ocean can most likely result in great damage to S. japonica cultivation.

Establishing the thermal reaction norm of coral larvae under elevated pCO2 is crucial to anticipate how larval dispersal and population maintenance may be affected by future climate change. Here, we characterized the functional relationship between temperature (27−33 °C) and larval performance of the reef coral Pocillopora damicornis under two pCO2 levels. The results showed that the temperature threshold of larvae was between 32 and 33 °C, as evidenced by the abrupt declines in photochemical efficiency and symbiont density, whereas no oxidative damage was observed between 27 and 33 °C and elevated pCO2 did not influence any of these parameters. In addition, larval respiration and photosynthesis rates exhibited parabolic responses to temperature, and this relationship conformed to the Gaussian–Gompertz model with an optimal temperature around 31.5 °C, which was approximately 2.5 °C above the summer mean temperature, suggesting the potential for thermal acclimation. Most importantly, elevated pCO2 significantly enhanced the larval photosynthesis and the stimulatory effect of elevated pCO2 on the photosynthetic rates and capacity was more pronounced in cool and warm temperatures, indicative of shifted thermal sensitivity under high pCO2. These results suggest that ocean acidification could alter the thermal performance curves and tolerance window of brooded P. damicornis larvae, with profound and important implications for larval ecology in a future changing ocean.

Seagrasses account for approximately 10% of the total carbon stored in the ocean, although photosynthesis of seagrasses is carbon-limited at present oceanic pH levels. Therefore, increasing atmospheric CO2 concentration, which results in ocean acidification/carbonation, is predicted to have a positive impact on seagrass productivity. Previous studies have confirmed the positive influence of increasing CO2 on photosynthesis and survival of the temperate eelgrass Zostera marina, but the acclimation of photoprotective mechanisms in this context has not been characterized. We aimed to quantify the long-term impacts of ocean acidification on photochemical control mechanisms that promote photosynthesis while simultaneously protecting eelgrass from photodamage. Eelgrass were grown in controlled outdoor aquaria at different aqueous CO2 concentrations ranging from ~50 to ~2100 µM from May 2013 to October 2014 and examined for differences in leaf optical properties. Even with daily and seasonal variations of temperature and light, CO2 enrichment consistently increased plant size, leaf thickness and chlorophyll use efficiency, and decreased pigment content and the package effect while maintaining similar light-harvesting efficiency. These acclimation responses suggest that a common photosynthetic sensory function, such as redox regulation, can be manipulated by CO2 availability, as well as light, and may serve to optimize photosynthetic carbon gain by seagrasses into the Anthropocene.

Ocean warming and acidification pose serious threats to cold-water corals (CWCs) and the surrounding habitat. Yet, little is known about the role of natural short-term and seasonal environmental variability, which could be pivotal to determine the resilience of CWCs in a changing environment. Here, we provide continuous observational data of the hydrodynamic regime (recorded using two benthic landers) and point measurements of the carbonate and nutrient systems from five Lophelia pertusa reefs in the Langenuen Fjord, southwestern Norway, from 2016 to 2017. In this fjord setting, we found that over a tidal (&lt, 24 h) cycle during winter storms, the variability of measured parameters at CWC depths was comparable to the intra-annual variability, demonstrating that single point measurements are not sufficient for documenting (and monitoring) the biogeochemical conditions at CWC sites. Due to seasonal and diurnal forcing, parts of the reefs experienced temperatures up to 4 °C warmer (i.e., &gt, 12 °C) than the mean conditions and high CT concentrations of 20 µmol kg−1 over the suggested threshold for healthy CWC reefs (i.e., &gt, 2170 µmol kg−1). Combined with hindcast measurements, our findings indicate that these shallow fjord reefs may act as an early hotspot for ocean warming and acidification. We predict that corals in Langenuen will face seasonally high temperatures (&gt, 18 °C) and hypoxic and corrosive conditions within this century. Therefore, these fjord coral communities could forewarn us of the coming consequences of climate change on CWC diversity and function.

The brooding reef-building octocoral Heliopora is widespread on Indo-West Pacific reefs and appears to be relatively resistant to thermal stress, which may enable it to persist locally while scleractinians diminish under Anthropocene conditions. However, basic physiological measurements of “blue corals” are lacking and prevent their inclusion in trait-based studies. We address this by quantifying rates (mean ± SE) of linear extension (0.86 ± 0.05 cm yr−1) and skeletal density (2.01 ± 0.06 g cm−3) to estimate calcification rates (0.87 ± 0.08 g cm−2 yr−1) for the small branching/columnar morphology of Heliopora coerulea. We postulate that H. coerulea may become an increasingly important reef-builder under ocean warming due to its relative resistance to thermal stress and high skeletal density that make colonies less vulnerable to storm damage under ocean acidification. Moreover, Heliopora corals are likely dispersal limited suggesting they may be an underappreciated genus for restoration of stress-tolerant reef-building capacity on degraded reefs.

[Abstract] Calcified coralline algae are ecologically important in rocky habitats in the marine photic zone worldwide and there is growing concern that ocean acidification will severely impact them. Laboratory studies of these algae in simulated ocean acidification conditions have revealed wide variability in growth, photosynthesis and calcification responses, making it difficult to assess their future biodiversity, abundance and contribution to ecosystem function. Here, we apply molecular systematic tools to assess the impact of natural gradients in seawater carbonate chemistry on the biodiversity of coralline algae in the Mediterranean and the NW Pacific, link this to their evolutionary history and evaluate their potential future biodiversity and abundance. We found a decrease in the taxonomic diversity of coralline algae with increasing acidification with more than half of the species lost in high pCO2 conditions. Sporolithales is the oldest order (Lower Cretaceous) and diversified when ocean chemistry favoured low Mg calcite deposition; it is less diverse today and was the most sensitive to ocean acidification. Corallinales were also reduced in cover and diversity but several species survived at high pCO2; it is the most recent order of coralline algae and originated when ocean chemistry favoured aragonite and high Mg calcite deposition. The sharp decline in cover and thickness of coralline algal carbonate deposits at high pCO2 highlighted their lower fitness in response to ocean acidification. Reductions in CO2 emissions are needed to limit the risk of losing coralline algal diversity. Fieldwork in the Mediterranean was supported by the EU ‘Mediterranean Sea Acidification under a changing climate’ project (MedSeA; grant agreement 265103; MM, JH-S)

Symbiosis establishment is a milestone in the life cycles of most broadcast-spawning corals; however, it remains largely unknown how initial symbiont infection is affected by ocean warming and acidification, particularly for massive corals. This study investigated the combined effects of elevated temperature (29 vs. 31 °C) and pCO2 (~ 450 vs. ~ 1000 μatm) on the recruits of a widespread massive coral, Platygyra daedalea. Results showed that geometric diameter and symbiosis establishment were unaffected by high pCO2, while elevated temperature significantly reduced successful symbiont infection by 50% and retarded the geometric diameter by 6%. Although neither increased temperature, pCO2, nor their interaction affected survival or algal pigmentation of recruits, there was an inverse relationship between symbiont infection rates and survivorship, especially at high temperatures, possibly as a result of oxidative stress caused by algal symbionts under increased temperature. Intriguingly, the proportion of Durusdinium did not increase in recruits at 31 °C, while recruits reared under high pCO2 hosted less Breviolum and more Durusdinium, indicating a high degree of plasticity of early symbiosis and contrasting to the previous finding that heat stress usually leads to the prevalence of thermally tolerant Durusdinium in coral recruits. These results suggest that ocean warming is likely to be more deleterious for the early success of P. daedalea than ocean acidification and provide insights into our understanding of coral-algal symbiotic partnerships under future climatic conditions.

Globally, climate change impacts on marine ecosystems are evident in physical, chemical, and biological processes, and are generally more extensive in faster warming regions. China makes the largest contribution of any country to global fisheries production and has experienced severe declines in marine health and biodiversity, and so the current and potential impacts of marine climate change are a large concern for both fisheries and biodiversity. China also has marine regions warming in the top 10% globally, necessitating a thorough understanding of how marine systems are changing so that appropriate corresponding countermeasures can be identified and prioritized. Here, we review and collate what is currently understood about documented and projected responses of marine systems to climate change in Chinese coasts and oceans, from physical, biological, and ecological perspectives, through to impacts on key ecosystems. Our results show extensive change attributed to climate change throughout Chinese marine systems, including red tide bloom events that have been recorded an order of magnitude more frequently in recent decades. Ocean acidification has led to the increased mortality of marine calcifying organisms through effects on the biomineralization process and physiological functions. Moreover, many species have been documented undergoing extensive changes in geographic distribution, with potential implications for species interactions and trophic food webs, as well as important habitats like coral reefs, seagrass, and mangroves. Some constructive laws and actions have been introduced in response to these climate-driven changes, such as actions to reduce pollution and increase artificial propagation and replanting of habitat species, however, addressing the impacts of marine climate change remains a considerable and escalating challenge.

Global change is threatening coral reefs, with rising temperatures leading to repeat bleaching events (dysbiosis of coral hosts and their symbiotic algae) and ocean acidification reducing net coral calcification. Although global-scale mass bleaching events are revealing fine-scale patterns of coral resistance and resilience, traits that lead to persistence under environmental stress remain elusive. Here, we conducted a 95-day controlled-laboratory experiment to investigate how duration of exposure to ocean warming (28, 31{degrees}C), acidification (pCO2 = 400-2800 atm), and their interaction influence the physiological responses of two Caribbean reef-building coral species (Siderastrea siderea, Pseudodiploria strigosa) from two reef zones of the Belize Mesoamerican Barrier Reef System. Every 30 days, calcification rate, total host protein and carbohydrate, chlorophyll a pigment concentration, and symbiont cell density were quantified for the same coral colony to characterize acclimatory responses of each genotype. Physiologies of the two species were differentially affected by these stressors, with exposure duration modulating responses. Siderastrea siderea was most affected by extreme pCO2 (~2800 atm), which resulted in reduced calcification rate, symbiont density, and chlorophyll a concentration. Siderastrea siderea calcification rate initially declined under extreme pCO2 but recovered by the final time point, and overall demonstrated resistance to next-century pCO2 and temperature stress. In contrast, P. strigosa was more negatively impacted by elevated temperature (31{degrees}C). Reductions in P. strigosa calcification rate and total carbohydrates were consistently observed over time regardless of pCO2 treatment, with the greatest reductions observed under elevated temperature. However, nearshore colonies of P. strigosa maintained calcification rates under elevated temperature throughout all exposure durations, suggesting individuals from this environment may be locally adapted to the warmer temperatures characterizing their natal reef zone. This experiment highlights how tracking individual coral colony physiology across broad exposure durations can capture acclimatory responses of corals to global change stressors.

Responses of corals to seawater acidification have been extensively studied. Sensitivity varies widely between species, highlighting the need to avoid extrapolation from one to another to get an accurate understanding of coral community responses. We tested the responses of seven coral species (Acropora cytherea, Acropora hyacinthus, Acropora pulchra, Leptastrea pruinosa, Montipora grisea, Pavona cactus, Pocillopora verrucosa) from the Mo'orea lagoon to a 48-day exposure to three pH scenarios (pH 7.95, 7.7 and 7.3). Tissue necrosis, mortality, growth rates, photophysiological performances and colour index were recorded. Few significant differences were noted between pH 7.95 and 7.7, but species-specific responses were observed at pH 7.3. While our data do not allow identification of the mechanisms behind this diversity in response between species inhabiting the same environment, it can exclude several hypotheses such as local adaptation, skeletal type, corallum morphology or calcification rate as sole factors determining coral sensitivity to pH.

Quantifying the strength of non-trophic interactions exerted by foundation species is critical to understanding how natural communities respond to environmental stress. In the case of ocean acidification (OA), submerged marine macrophytes, such as seagrasses, may create local areas of elevated pH due to their capacity to sequester dissolved inorganic carbon through photosynthesis. However, although seagrasses may increase seawater pH during the day, they can also decrease pH at night due to respiration. Therefore, it remains unclear how consequences of such diel fluctuations may unfold for organisms vulnerable to OA. We established mesocosms containing different levels of seagrass biomass (Zostera marina) to create a gradient of carbonate chemistry conditions and explored consequences for growth of juvenile and adult oysters (Crassostrea gigas), a non-native species widely used in aquaculture that can co-occur, and is often grown, in proximity to seagrass beds. In particular, we investigated whether increased diel fluctuations in pH due to seagrass metabolism affected oyster growth. Seagrasses increased daytime pH up to 0.4 units but had little effect on nighttime pH (reductions less than 0.02 units). Thus, both the average pH and the amplitude of diel pH fluctuations increased with greater seagrass biomass. The highest seagrass biomass increased oyster shell growth rate (mm day−1) up to 40%. Oyster somatic tissue weight and oyster condition index exhibited a different pattern, peaking at intermediate levels of seagrass biomass. This work demonstrates the ability of seagrasses to facilitate oyster calcification and illustrates how non-trophic metabolic interactions can modulate effects of environmental change.

With carbon dioxide (CO2) levels rising dramatically, climate change threatens marine environments. Due to increasing CO2 concentrations in the ocean, pH levels are expected to drop by 0.4 units by the end of the century. There is an urgent need to understand the impact of ocean acidification on chemical-ecological processes. To date, the extent and mechanisms by which the decreasing ocean pH influences chemical communication are unclear. Combining behaviour assays with computational chemistry, we explore the function of the predator related cue 2-phenylethylamine (PEA) for hermit crabs (Pagurus bernhardus) in current and end-of-the-century oceanic pH. Living in intertidal environments, hermit crabs face large pH fluctuations in their current habitat in addition to climate-change related ocean acidification. We demonstrate that the dietary predator cue PEA for mammals and sea lampreys is an attractant for hermit crabs, with the potency of the cue increasing with decreasing pH levels. In order to explain this increased potency, we assess changes to PEA’s conformational and charge-related properties as one potential mechanistic pathway. Using quantum chemical calculations validated by NMR spectroscopy, we characterise the different protonation states of PEA in water. We show how protonation of PEA could affect receptor-ligand binding, using a possible model receptor for PEA (human TAAR1). Investigating potential mechanisms of pH-dependent effects on olfactory perception of PEA and the respective behavioural response, our study advances the understanding of how ocean acidification interferes with the sense of smell and thereby might impact essential ecological interactions in marine ecosystems.

Large benthic foraminifera are major carbonate components in tropical carbonate platforms, important carbonate producers, stratigraphic tools and powerful bioindicators (proxies) of environmental change. The application of large benthic foraminifera in tropical coral reef environments has gained considerable momentum in recent years. These modern ecological assessments are often carried out by micropalaeontologists or ecologists with expertise in the identification of foraminifera. However, large benthic foraminifera have been under‐represented in favour of macro reef‐builders, for example, corals and calcareous algae. Large benthic foraminifera contribute about 5% to modern reef‐scale carbonate sediment production. Their substantial size and abundance are reflected by their symbiotic association with the living algae inside their tests. When the foraminiferal holobiont (the combination between the large benthic foraminifera host and the microalgal photosymbiont) dies, the remaining calcareous test renourishes sediment supply, which maintains and stabilizes shorelines and low‐lying islands. Geological records reveal episodes (i.e. late Palaeocene and early Eocene epochs) of prolific carbonate production in warmer oceans than today, and in the absence of corals. This begs for deeper consideration of how large benthic foraminifera will respond under future climatic scenarios of higher atmospheric carbon dioxide (pCO2) and to warmer oceans. In addition, studies highlighting the complex evolutionary associations between large benthic foraminifera hosts and their algal photosymbionts, as well as to associated habitats, suggest the potential for increased tolerance to a wide range of conditions. However, the full range of environments where large benthic foraminifera currently dwell is not well‐understood in terms of present and future carbonate production, and impact of stressors. The evidence for acclimatization, at least by a few species of well‐studied large benthic foraminifera, under intensifying climate change and within degrading reef ecosystems, is a prelude to future host–symbiont resilience under different climatic regimes and habitats than today. This review also highlights knowledge gaps in current understanding of large benthic foraminifera as prolific calcium carbonate producers across shallow carbonate shelf and slope environments under changing ocean conditions., Minerva Foundation http://dx.doi.org/10.13039/501100001658, Deutsche Forschungsgemeinschaft http://dx.doi.org/10.13039/501100001659

Carbon dioxide (CO2) is being continuously discharged into the atmosphere and is now at a concentration sufficient to cause ocean acidification. In particular, it has been reported that changes in carbonate concentration in seawater by ocean acidification can inhibit olfactory function and predator avoidance ability in fish and affect their circadian rhythm. However, although increased CO2 concentration in seawater is an important environmental factor affecting fish survival, only a few studies have been conducted to evaluate the effect of CO2 and different photoperiods. Therefore, in this study, we investigated changes in the circadian rhythm of juvenile olive flounder (Paralichthys olivaceus) under different light conditions (12 h ligh:12 h dark; constant dark; constant light) and CO2 exposure levels (pH 8.1, 7.8, and 7.5), by analyzing changes in plasma concentrations of Cryptochrome1 and Period2, which are secreted during the day (light conditions), and melatonin, which is secreted at night (dark conditions). CO2 exposure led to phase shifts (temporarily abolished, phase delayed, or reversed) in the rhythm of juveniles. In conclusion, CO2 exposure, along with changes in photoperiods, increases the disturbance in the circadian rhythm of juvenile P. olivaceus.

Ocean acidification and warming (OAW) pose a threat to marine organisms, with particular negative effects on molluscs, and can jeopardize the provision of associated ecosystem services. As predation is an important factor shaping populations in the marine environment, the ability of organisms to retain traits valuable in predation resistance under OAW may be decisive for future population maintenance. We examine how exposure to seawater temperature (control: 16.8°C and warm: 20°C) and atmospheric pCO2 (ambient [~400], ~750, and ~1000 ppm) conditions affects traits linked to predation resistance (adductor muscle strength and shell strength) in two ecologically and economically important species of oysters (Magallana gigas and Ostrea edulis) and relate them to changes in morphometry and fitness (condition index, muscle and shell metrics). We show that O. edulis remained unimpacted following exposure to OAW scenarios. In contrast, the adductor muscle of M. gigas was 52% stronger under elevated temperature and ~750 ppm pCO2, and its shell was 44% weaker under combined elevated temperature and ~1000 ppm pCO2. This suggests greater resistance to mechanical predation toward the mid-21st century, but greater susceptibility toward the end of the century. For both species, individuals with more somatic tissue held an ecological advantage against predators; consequently, smaller oysters may be favoured by predators under OAW. By affecting fitness and predation resistance, OAW may be expected to induce shifts in predator-prey interactions and reshape assemblage structure due to species and size selection, which may consequently modify oyster reef functioning. This could in turn have implications for the provision of associated ecosystem services.

Antarctic krill Euphausia superba is a key species in the Southern Ocean, where its habitat is projected to undergo continued warming and increases in pCO2. Experiments during 2 summer field seasons at Palmer Station, Antarctica, investigated the independent and interactive effects of elevated temperature and pCO2 (decreased pH) on feeding, growth, acid-base physiology, metabolic rate, and survival of adult Antarctic krill. Ingestion and clearance rates of chlorophyll were depressed under low pH (7.7) compared to ambient pH (8.1) after a 48 h acclimation period, but this difference disappeared after a 21 d acclimation. Growth rates were negligible and frequently negative, but were significantly more negative at high (3°C, -0.03 mm d-1) compared to ambient temperature (0°C, -0.01 mm d-1) with no effect of pH. Modest elevations in tissue total CO2 and tissue pH were apparent at low pH but were short-lived. Metabolic rate increased with temperature but was suppressed at low pH in smaller but not larger krill. Although effects of elevated temperature and/or decreased pH were mostly sublethal, mortality was higher at high temperature/low pH (58%) compared to ambient temperature/pH or ambient temperature/low pH (>90%). This study identified 3 dominant patterns: (1) shorter-term effects were primarily pH-dependent; (2) krill compensated for lower pH relatively quickly; and (3) longer-term effects on krill growth and survival were strongly driven by temperature with little to no pH effect.

Ocean warming and acidification can cause deleterious effects on marine biota, which may be potentialized when associated with metal pollution. Thus, the aim of this work was to evaluate the effects of pH decrease, temperature increase and lead contamination on fertility rate and embryo-larval development of Echinometra lucunter. Gametes and embryos were exposed at pH 8.2 (control) and 7.5; at 26°C (control) and 28°C; and at lead concentrations of 0 (control), 125, 250 and 500 μg/L. These conditions were tested individually and in combination. The fertilization rate of E. lucunter was only significantly reduced in the treatments where temperature was increased and in the treatment where pH decreased. However, the development rate of the pluteus larvae was significantly affected in the majority of treatments: metal contamination in the higher concentration; decreased pH in all metal concentrations; increased temperature in the highest metal concentration; decreased pH and increased temperature and all variables combined, which is decreased pH, increased temperature and metal contamination in relation to the control group (C). The development test was shown to be more sensitive than the fertilization test in all the studied scenarios. In general, the present study suggests that pH decrease, temperature increase and metal pollution may have a significant impact on E. lucunter reproductive cycle.

The laminarialean kelpSaccharina latissimais a common macroalga along rocky shorelines that is also frequently used in aquaculture. This study examined how ocean acidification may alter the growth ofS. latissimaas well as grazing onS. latissimaby the gastropodLacuna vincta. Under elevated nutrients,S. latissimaexperienced significantly enhanced growth atpCO2levels ≥1200 µatm compared to ambientpCO2(~400 µatm). ElevatedpCO2(≥830 µatm) also significantly reduced herbivory ofL. vinctagrazing onS. latissimarelative to ambientpCO2. There was no difference in grazing ofS. latissimapreviously grown under elevated or ambientpCO2, suggesting lowered herbivory was due to harm to the gastropods rather than alteration of the biochemical composition of the kelp. Decreased herbivory was specifically elicited whenL. vinctawere exposed to elevatedpCO2in the absence of food for ≥18 h prior to grazing, with reduced grazing persisting 72 h. Elevated growth ofS. latissimaand reduced grazing byL. vinctaat 1200 µatmpCO2combined to increase net growth rates ofS. latissimamore than 4-fold relative to ambientpCO2.L. vinctaconsumed 70% of daily production byS. latissimaunder ambientpCO2but only 38 and 9% at 800 and 1200 µatm, respectively. Collectively, decreased grazing byL. vinctacoupled with enhanced growth ofS. latissimaunder elevatedpCO2demonstrates that increased CO2associated with climate change and/or coastal processes will dually benefit commercially and ecologically important kelps by both promoting growth and reducing grazing pressure.

In mosaic marine habitats, such as intertidal zones, ocean acidification (OA) is exacerbated by high variability of pH, temperature, and biological CO2 production. The nonlinear interactions among these drivers can be context‐specific and their effect on organisms in these habitats remains largely unknown, warranting further investigation.We were particularly interested in Mytilus edulis (the blue mussel) from intertidal zones of the Gulf of Maine (GOM), USA, for this study. GOM is a hot spot of global climate change (average sea surface temperature (SST) increasing by >0.2°C/year) with >60% decline in mussel population over the past 40 years.Here, we utilize bioenergetic underpinnings to identify limits of stress tolerance in M. edulis from GOM exposed to warming and OA. We have measured whole‐organism oxygen consumption rates and metabolic biomarkers in mussels exposed to control and elevated temperatures (10 vs. 15°C, respectively) and current and moderately elevated P CO2 levels (~400 vs. 800 µatm, respectively).Our study demonstrates that adult M. edulis from GOM are metabolically resilient to the moderate OA scenario but responsive to warming as seen in changes in metabolic rate, energy reserves (total lipids), metabolite profiles (glucose and osmolyte dimethyl amine), and enzyme activities (carbonic anhydrase and calcium ATPase).Our results are in agreement with recent literature that OA scenarios for the next 100–300 years do not affect this species, possibly as a consequence of maintaining its in vivo acid‐base balance., Our study demonstrates that adult Mytilus edulis from Gulf of Maine, one of the hot spots for global climate change, are metabolically resilient to the moderate acidification scenarios for the next 100–300 years but responsive to warming as seen in changes in metabolic rate, energy reserves, metabolite profiles, and enzyme activities.

Global‐scale ocean acidification has spurred interest in the capacity of seagrass ecosystems to increase seawater pH within crucial shoreline habitats through photosynthetic activity. However, the dynamic variability of the coastal carbonate system has impeded generalization into whether seagrass aerobic metabolism ameliorates low pH on physiologically and ecologically relevant timescales. Here we present results of the most extensive study to date of pH modulation by seagrasses, spanning seven meadows (Zostera marina) and 1000 km of U.S. west coast over 6 years. Amelioration by seagrass ecosystems compared to non‐vegetated areas occurred 65% of the time (mean increase 0.07 ± 0.008 SE). Events of continuous elevation in pH within seagrass ecosystems, indicating amelioration of low pH, were longer and of greater magnitude than opposing cases of reduced pH or exacerbation. Sustained elevations in pH of >0.1, comparable to a 30% decrease in [H+], were not restricted only to daylight hours but instead persisted for up to 21 days. Maximal pH elevations occurred in spring and summer during the seagrass growth season, with a tendency for stronger effects in higher latitude meadows. These results indicate that seagrass meadows can locally alleviate low pH conditions for extended periods of time with important implications for the conservation and management of coastal ecosystems., The most extensive study to date of pH modulation by seagrasses, spanning seven meadows (Zostera marina) and 1000 km of U.S. west coast over 6 years. Amelioration of low pH by seagrass ecosystems occurred most of the time, where events of continuous elevation in pH were longer and of greater magnitude than opposing cases of reduced pH or exacerbation. Sustained elevations in pH were not restricted only to daylight hours. Maximal pH elevations occurred in spring and summer during the seagrass growth season, with a tendency for stronger effects in higher latitude meadows.

The carbonate chemistry in coastal waters is more variable compared with that of open oceans, both in magnitude and time scale of its fluctuations. However, knowledge of the responses of coastal phytoplankton to dynamic changes in pH/pCO2 has been scarcely documented. Hence, we investigated the physiological performance of a coastal isolate of the coccolithophore Emiliania huxleyi (PML B92/11) under fluctuating and stable pCO2 regimes (steady ambient pCO2, 400 μatm; steady elevated pCO2, 1200 μatm; diurnally fluctuating elevated pCO2, 600–1800 μatm). Elevated pCO2 inhibited the calcification rate in both the steady and fluctuating regimes. However, higher specific growth rates and lower ratios of calcification to photosynthesis were detected in the cells grown under diurnally fluctuating elevated pCO2 conditions. The fluctuating pCO2 regime alleviated the negative effects of elevated pCO2 on effective photochemical quantum yield and relative photosynthetic electron transport rate compared with the steady elevated pCO2 treatment. Our results suggest that growth of E. huxleyi could benefit from diel fluctuations of pH/pCO2 under future-projected ocean acidification, but its calcification was reduced by the fluctuation and the increased concentration of CO2, reflecting a necessity to consider the influences of dynamic pH fluctuations on coastal carbon cycles associated with ocean global changes.

Reef-building corals are inhabited by functionally diverse microorganisms which play important roles in coral health and persistence in the Anthropocene. However, our understanding of the complex associations within coral holobionts is largely limited, particularly transgenerational exposure to environmental stress, like ocean acidification. Here we investigated the microbiome development of an ecologically important coral Pocillopora damicornis following transgenerational exposure to moderate and high pCO2 (partial pressure of CO2) levels, using amplicon sequencing and analysis. Our results showed that the Symbiodiniaceae community structures in adult and juvenile had similar patterns, all of which were dominated by Durusdinium spp., previously known as clade D. Conversely, prokaryotic communities varied between adults and juveniles, possibly driven by the effect of host development. Surprisingly, there were no significant changes in both Symbiodiniaceae and prokaryotic communities with different pCO2 treatments, which was independent of the life history stage. This study shows that ocean acidification has no significant effect on P. damicornis microbiome, and warrants further research to test whether transgenerational acclimation exists in coral holobiont to projected future climate change.

Calcifying organisms such as benthic foraminifera are susceptible to changes in ocean pH and alkalinity. Responses to these changes include variations in mortality, calcification rates or assemblage composition, which have been observed in field and experimental studies. Here we applied a growth experiment with benthic foraminiferal propagules under different pH conditions to gather insights into the effect of pH on the composition of grown assemblages. A homogeneous propagule assemblage from a local mudflat in Corfu Island (Greece) was exposed to a range of pH conditions (6.5, 7.2, 7.8 and 8.5) for 5 weeks. In a second experiment, the assemblages were first exposed to low and subsequently to high conditions for a total of 8 weeks. After termination of the experiments, we recorded high survivability and growth throughout the treatments. Analysis of the assemblage composition of the first experiments revealed a shift from porcelaneous dominated taxa in the higher pH treatments to an assemblage with higher numbers of agglutinated taxa in the lower pH treatments. Soft-shelled monothalamous species were common throughout. The second experiment revealed assemblages that were significantly dominated by porcelaneous taxa with monothalamous taxa being almost absent. The results of this study are congruent with other observations on changing assemblage compositions with changing pH from both laboratory and field studies. The fast response of the assemblages through activation of potentially dormant propagules adds insights into the mechanisms behind seasonal composition changes in naturally variable environments such as river estuaries. They also shed new light on possible effects of continuous decreases in ocean pH on shallow-water foraminiferal assemblages in future.

Seawater changing chemistry has consequences on coastal ecosystems and their living resources. Future projections suggest the pH could drop ~0.2-0.3 pH units by the year 2100 under a business-as-usual (BAU) CO2 emission scenario. Marine calcifying organisms such as corals, calcifying algae, crustaceans, mussels, oysters and clams are most likely to be impacted by ocean acidification. The Isognomon alatus (flat tree oyster) is an important species that can be negatively affected by the lowering of seawater pH. Isognomon alatus is an important food source, a substrate for other benthic organisms (e.g., stone crab, Menippe mercenaria) and contribute to nutrients recycling in coastal ecosystems. The study was conducted to test the impacts acidified seawater CO2 on the growth of I. alatus under controlled laboratory conditions as well as field experiment. The Isognomon alatus lost weight and experienced negative growth rates of –0.56 ± 0.36 mg g-1day-1 under average pH values of 7.8 expected by the end of this century compared to a loss of –0.26 ± 0.23 mg g-1day-1 under ambient pH (value 8.1) conditions. In contrast, I. alatus incubated in a field experiment showed a gain in weight and positive growth of 3.30 ± 0.23 mg g-1day-1 despite exposure to pH levels (~7.4) during low tide significantly lower than those experienced in the laboratory. Overall, the results showed concern on the impacts of acidification flat tree oyster (Bivalvia:Isognomonidae). A decline of calcifying bivalves populations can impact coastal ecosystems function and indirectly affect the human beings that depend on them as a food source. Key words: Ocean acidification, climate change, Isognomonidae, shell dissolution, bivalve's growth, estuarine.

Coastal ecosystems are prone to multiple anthropogenic and natural stressors including eutrophication, acidification, and invasive species. While the growth of some macroalgae can be promoted by excessive nutrient loading and/or elevatedpCO2, responses differ among species and ecosystems. Native to the western Pacific Ocean, the filamentous, turf-forming rhodophyte,Dasysiphonia japonica,appeared in estuaries of the northeastern Atlantic Ocean during the 1980s and the northwestern Atlantic Ocean during the late 2000s. Here, we report on the southernmost expansion of theD. japonicain North America and the effects of elevated nutrients and elevatedpCO2on the growth ofD. japonicaover an annual cycle in Long Island, New York, USA. Growth limitation of the macroalga varied seasonally. During winter and spring, when water temperatures were pCO2(p p pCO2. The δ13C content of regional populations ofD. japonicawas −30‰, indicating the macroalga is an obligate CO2-user. This result, coupled with significantly increased growth under elevatedpCO2when temperatures were pCO2was significantly lower in Long Island estuaries compared to warmer months when estuaries are enriched in metabolically derived CO2. The δ15N content of this macroalga (9‰) indicated it utilized wastewater-derived N and its N limitation during warmer months coincided with lower concentrations of dissolved inorganic N in the water column. Given the stimulatory effect of nutrients on this macroalga and that eutrophication can promote seasonally elevatedpCO2, this study suggests that eutrophic estuaries subject to peak annual temperatures D. japonicaas ocean acidification intensifies. Conversely, nutrient reductions would serve as a management approach that would make coastal regions more resilient to invasions by this macroalga.

Much of the CO2 released by human activity into the atmosphere is dissolving into the oceans, making them more acidic. In this study we provide the first data on the short- and long-term im...

The capacity of marine organisms to adapt and/or acclimate to climate change might differ among distinct populations, depending on their local environmental history and phenotypic plasticity. Kelp forests create some of the most productive habitats in the world, but globally, many populations have been negatively impacted by multiple anthropogenic stressors. Here, we compare the physiological and molecular responses to ocean acidification (OA) and warming (OW) of two populations of the giant kelp Macrocystis pyrifera from distinct upwelling conditions (weak vs strong). Using laboratory mesocosm experiments, we found that juvenile Macrocystis sporophyte responses to OW and OA did not differ among populations: elevated temperature reduced growth while OA had no effect on growth and photosynthesis. However, we observed higher growth rates and NO3− assimilation, and enhanced expression of metabolic-genes involved in the NO3− and CO2 assimilation in individuals from the strong upwelling site. Our results suggest that despite no inter-population differences in response to OA and OW, intrinsic differences among populations might be related to their natural variability in CO2, NO3− and seawater temperatures driven by coastal upwelling. Further work including additional populations and fluctuating climate change conditions rather than static values are needed to precisely determine how natural variability in environmental conditions might influence a species’ response to climate change.

Background The red sea urchin Mesocentrotus franciscanus is an ecologically important kelp forest herbivore and an economically valuable wild fishery species. To examine how M. franciscanus responds to its environment on a molecular level, differences in gene expression patterns were observed in embryos raised under combinations of two temperatures (13 °C or 17 °C) and two pCO2 levels (475 μatm or 1050 μatm). These combinations mimic various present-day conditions measured during and between upwelling events in the highly dynamic California Current System with the exception of the 17 °C and 1050 μatm combination, which does not currently occur. However, as ocean warming and acidification continues, warmer temperatures and higher pCO2 conditions are expected to increase in frequency and to occur simultaneously. The transcriptomic responses of the embryos were assessed at two developmental stages (gastrula and prism) in light of previously described plasticity in body size and thermotolerance under these temperature and pCO2 treatments. Results Although transcriptomic patterns primarily varied by developmental stage, there were pronounced differences in gene expression as a result of the treatment conditions. Temperature and pCO2 treatments led to the differential expression of genes related to the cellular stress response, transmembrane transport, metabolic processes, and the regulation of gene expression. At each developmental stage, temperature contributed significantly to the observed variance in gene expression, which was also correlated to the phenotypic attributes of the embryos. On the other hand, the transcriptomic response to pCO2 was relatively muted, particularly at the prism stage. Conclusions M. franciscanus exhibited transcriptomic plasticity under different temperatures, indicating their capacity for a molecular-level response that may facilitate red sea urchins facing ocean warming as climate change continues. In contrast, the lack of a robust transcriptomic response, in combination with observations of decreased body size, under elevated pCO2 levels suggest that this species may be negatively affected by ocean acidification. High present-day pCO2 conditions that occur due to coastal upwelling may already be influencing populations of M. franciscanus.

Prey around the world experience the risk of predation, and most have evolved constitutive and phenotypically plastic defences in response. Phenotypically plastic defences often come with trade-offs related to foraging, such that the magnitude of defence is mediated by body condition and food availability. Such adaptive responses are beneficial to prey, and there is an increasing appreciation that they can be disrupted by chemical compounds resulting from human activities. We examined predator-induced behaviours in freshwater snails (Physa acuta) using 32 combinations of different concentrations of olfactory predator cues, body condition and food availability to understand how they respond to the trade-off between avoiding predators and obtaining food. Using a subset of these conditions (16 environments), we then examined how snail responses were altered by increases or decreases in pH. We found that snails responded to increased predator cue concentrations with a shape consistent with a saturating response curve and that low body condition and low food availability weakened these responses. When we increased pH (from 7.8 to 9.5), snails exhibited weaker predator avoidance responses, but only in the absence of food. When we decreased pH (from 7.8 to 6.0), snails exhibited stronger predator avoidance responses and stronger declines in foraging, but only in the presence of food. Collectively, these results suggest that changes in pH due to acid mine drainage, eutrophication and ocean acidification may substantially alter the adaptive responses of aquatic animals. Future work should determine whether such info-disruption is common in other taxa, determine the underlying mechanisms and quantify the consequences of info-disruption to predator–prey and prey–resource interactions.

Species of the calcified, articulate coralline Amphiroa are key components of many shallow marine ecosystems. Understanding their mineral composition is important as their susceptibility to dissolution, due to ocean acidification, may vary with mineral composition. We studied the distribution of Mg-calcite, very high magnesium calcite (VHMC), and dolomite within Amphiroa species to elucidate their mineral properties and susceptibility to dissolution. Results revealed that the asymmetrical X-ray diffraction (XRD) pattern typical of Amphiroa globally represents high levels of VHMC and dolomite composition carbonate. The dolomite seems most likely to be disordered, but higher resolution XRD is required for confirmation. The calcified long sides of medullary cells have predominantly VHMC/dolomite and the corners have bands of VHMC/dolomite. Epithallial cell walls are low Mg-calcite, and cortical cells are low Mg-calcite with bands of VHMC. VHMC/dolomite is more stable than Mg-calcite, and this may provide a competitive advantage for Amphiroa species as seawater pH declines. Further work is required to determine the metabolic controls on VHMC/dolomite mineral formation.

Seagrass Cymodocea nodosa was sampled off the Vulcano island, in the vicinity of a submarine volcanic vent. Leaf samples were collected from plants growing in a naturally acidified site, influenced by the long-term exposure to high CO2 emissions, and compared with others collected in a nearby meadow living at normal pCO2 conditions. The differential accumulated proteins in leaves growing in the two contrasting pCO2 environments was investigated. Acidified leaf tissues had less total protein content and the semi-quantitative proteomic comparison revealed a strong general depletion of proteins belonging to the carbon metabolism and protein metabolism. A very large accumulation of proteins related to the cell respiration and to light harvesting process was found in acidified leaves in comparison with those growing in the normal pCO2 site. The metabolic pathways linked to cytoskeleton turnover also seemed affected by the acidified condition, since a strong reduction in the concentration of cytoskeleton structural proteins was found in comparison with the normal pCO2 leaves. Results coming from the comparative proteomics were validated by the histological and cytological measurements, suggesting that the long lasting exposure and acclimation of C. nodosa to the vents involved phenotypic adjustments that can offer physiological and structural tools to survive the suboptimal conditions at the vents vicinity.

Anthropogenic carbon emissions released into the atmosphere is driving rapid, concurrent increases in temperature and acidity across the world's oceans. Disentangling the interactive effects of warming and acidification on vulnerable life stages is important to our understanding of responses of marine species to climate change. This study evaluates the interactive effects of these stressors on the acute response of gene expression of postlarval American lobster (Homarus americanus), a species whose geographic range is warming and acidifying faster than most of the world's oceans. In the context of our experiment, we found two especially noteworthy results: First, although physiological end points have consistently been shown to be more responsive to warming in similar experimental designs, our study found gene regulation to be considerably more responsive to elevated pCO2. Furthermore, the combined effect of both stressors on gene regulation was significantly greater than either stressor alone. Using a full factorial experimental design, lobsters were raised in control and elevated pCO2 concentrations (400 ppm and 1,200 ppm) and temperatures (16°C and 19°C). A transcriptome was assembled from an identified 414,517 unique transcripts. Overall, 1,108 transcripts were differentially expressed across treatments, several of which were related to stress response and shell formation. When temperature alone was elevated (19°C), larvae downregulated genes related to cuticle development; when pCO2 alone was elevated (1,200 ppm), larvae upregulated chitinase as well as genes related to stress response and immune function. The joint effects of end‐century stressors (19°C, 1,200 ppm) resulted in the upregulation of those same genes, as well as cellulase, the downregulation of calcified cuticle proteins, and a greater upregulation of genes related to immune response and function. These results indicate that changes in gene expression in larval lobster provide a mechanism to respond to stressors resulting from a rapidly changing environment., Using nextgen transcriptomic sequencing methodologies, our study evaluates the single and joint effects of elevated temperature and CO2 on gene regulation in the postlarval stage of the American lobster. Our study shows gene regulatory response to be considerably more affected by elevated pCO2 levels than elevated temperature, contrasting what has been shown in studies of physiological end points of larval crustaceans, as well as a strong joint effect of simultaneous stressors.

Both juvenile and adult life stages of the temperate scleractinian coral Oculina arbuscula are resilient to the effects of moderate ocean acidification (OA) in contrast to many tropical corals in which growth and calcification rates are suppressed. Here, potential mechanisms of resilience to OA related to photosynthetic physiology and inorganic carbon processing were studied in adult O. arbuscula colonies. After exposing colonies to ambient and elevated carbon dioxide (CO2) treatments for 7 weeks, photosynthetic performance was characterized using photosynthesis versus irradiance experiments, chlorophyll fluorescence kinetics, and algal pigment content. Inorganic carbon-processing capabilities were assessed by measurement of internal and external carbonic anhydrase activity of the coral host, internal carbonic anhydrase activity of symbiotic algae, and the reliance of photosynthesis on external carbonic anhydrase. Photosynthetic physiology was unaffected by OA ruling out the possibility that resilience was mediated by increased photosynthetic energy supply. Carbonic anhydrase activities were maintained at elevated CO2 suggesting no major rearrangements of the inorganic carbon-processing machinery, but this could be a sign of resilience since tropical corals often down-regulate carbonic anhydrases at high CO2. The general lack of effect of ocean acidification on these physiological traits suggests other characteristics, such as maintenance of calcifying fluid pH and ability to acquire energy from heterotrophy, may be more important for the resilience of O. arbuscula to OA.