1. Genome-wide association study reveals genes associated with the absence of intermuscular bones in tambaqui (Colossoma macropomum)
- Author
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Sónia C. S. Andrade, Caio Augusto Perazza, Priscilla Marqui Schmidt Villela, José de Ribamar da Silva Nunes, Z.-X. Gao, Fábio Pértille, Luiz Lehmann Coutinho, Vera Maria Fonseca de Almeida-Val, and Alexandre Wagner Silva Hilsdorf
- Subjects
0301 basic medicine ,Candidate gene ,Genetic Linkage ,Tambaqui ,Fish farming ,Single-nucleotide polymorphism ,Genome-wide association study ,Biology ,Polymorphism, Single Nucleotide ,Bone resorption ,Bone and Bones ,Linkage Disequilibrium ,Bone remodeling ,03 medical and health sciences ,Gene Frequency ,Osteogenesis ,Genetics ,Animals ,Fish processing ,Genetic Association Studies ,Zebrafish ,TAMBAQUI ,0402 animal and dairy science ,04 agricultural and veterinary sciences ,General Medicine ,biology.organism_classification ,040201 dairy & animal science ,030104 developmental biology ,Evolutionary biology ,Animal Science and Zoology ,Characiformes ,Brazil - Abstract
The presence of intermuscular bones in fisheries products limits the consumption and commercialization potential of many fish species, including tambaqui (Colossoma macropomum). These bones have caused medical emergencies and are an undesirable characteristic for fish farming because their removal is labor-intensive during fish processing. Despite the difficulty in identifying genes related to the lack of intermuscular bone in diverse species of fish, the discovery of individuals lacking intermuscular bones in a Neotropical freshwater characiform fish has provided a unique opportunity to delve into the genetic mechanisms underlying the pathways of intermuscular bone formation. In this study, we carried out a GWAS among boneless and wt tambaqui populations to identify markers associated with a lack of intermuscular bone. After analyzing 11 416 SNPs in 360 individuals (12 boneless and 348 bony), we report 675 significant (Padj
- Published
- 2020