1. KRAS, NRAS and BRAF mutations detected by next generation sequencing, and differential clinical outcome in metastatic colorectal cancer (MCRC) patients treated with first line FIr-B/FOx adding bevacizumab (BEV) to triplet chemotherapy
- Author
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Giancarlo Troncone, Daniela Di Giacomo, Antonella Dal Mas, Gemma Bruera, Umberto Malapelle, Francesco Pepe, Enrico Ricevuto, Giuseppe Calvisi, Pasquale Pisapia, Bruera, Gemma, Pepe, Francesco, Malapelle, Umberto, Pisapia, Pasquale, Mas, Antonella Dal, Di Giacomo, Daniela, Calvisi, Giuseppe, Troncone, Giancarlo, and Ricevuto, Enrico
- Subjects
0301 basic medicine ,Neuroblastoma RAS viral oncogene homolog ,Oncology ,medicine.medical_specialty ,Bevacizumab ,Colorectal cancer ,First line ,FIr-B/FOx intensive first line triplet chemotherapy plus bevacizumab ,medicine.disease_cause ,DNA sequencing ,03 medical and health sciences ,0302 clinical medicine ,Triplet chemotherapy ,Internal medicine ,Genotype ,medicine ,next generation sequencing ,business.industry ,metastatic colorectal cancer ,RAS/BRAF mutations ,medicine.disease ,030104 developmental biology ,030220 oncology & carcinogenesis ,50 genes panel ,RAS/BRAF mutation ,KRAS ,business ,Research Paper ,medicine.drug - Abstract
// Gemma Bruera 1, 2, * , Francesco Pepe 3, * , Umberto Malapelle 3 , Pasquale Pisapia 3 , Antonella Dal Mas 4 , Daniela Di Giacomo 1, 2 , Giuseppe Calvisi 4 , Giancarlo Troncone 3 and Enrico Ricevuto 1, 2 1 Oncology Territorial Care, S. Salvatore Hospital, Oncology Network ASL1 Abruzzo, University of L'Aquila, L'Aquila, Italy 2 Department of Biotechnological and Applied Clinical Sciences, University of L’Aquila, L’Aquila, Italy 3 Department of Public Health, University Federico II, Napoli, Italy 4 Pathology, S. Salvatore Hospital, Oncology Network ASL1 Abruzzo, L'Aquila, Italy * These authors equally contributed to this work Correspondence to: Enrico Ricevuto, email: enrico.ricevuto@univaq.it Keywords: FIr-B/FOx intensive first line triplet chemotherapy plus bevacizumab; metastatic colorectal cancer; next generation sequencing; RAS/BRAF mutations; 50 genes panel Received: October 06, 2017 Accepted: April 05, 2018 Published: May 29, 2018 ABSTRACT Background: First line triplet chemotherapy/BEV significantly improved clinical outcome of MCRC. KRAS/NRAS/BRAF mutations were evaluated by next generation sequencing (NGS) in MCRC patients treated with first line FIr-B/FOx. Methods: KRAS exons 2-4 ( KRAS 2-4 ), NRAS 2-4 , BRAF 15 were evaluated in 67 tumours by ION Torrent platform. Mutation detection criteria: >500×sequence coverage (cov); >1% mutant allelic fraction (AF). Clinical outcomes were compared by log-rank. Results: In 63 samples, KRAS 2-4 / NRAS 2-4 / BRAF 15 wild-type (wt) were 14 (22.2%), mutant (mut) 49 (77.8%): KRAS 2-4 42 (66.7%); NRAS 2-4 11 (16.4%); BRAF 15 5 (7.5%). Sixty mutations were detected, range 1-3 mut: 43 (71.7%) >1000×cov/>5% AF; 9 (15%) >500×cov/>5% AF; 8 (13.3%) >1000×cov/ 1000×cov/>5% AF, 8 (12.7%) >500×cov/>5% AF, 1 (1.6%) >1000×cov/ 500×cov/>5% AF, 4 (6%) >1000×cov/ A; c.1406 G>C; c.1756 G>A, 2 samples; c.1796 C>T. At 21 months (m) follow-up, clinical outcome wt compared to mut was not significantly different: in KRAS 2-4 / NRAS 2-4 / BRAF 15 , progression-free survival (PFS) 18/12 m, overall survival (OS) 28/22 m; 1/≥2 mutations, PFS 14/11, OS 37/22. PFS was trendy worse in RAS / BRAF wt vs ≥2 mut genes ( P 0.059). Conclusions: Most MCRC harboured KRAS 2-4 / NRAS 2-4 / BRAF 15 mutations by NGS, often multiple and affecting few tumoral clones; 22% were triple wt. Clinical outcome is not significantly affected by KRAS 2-4 / NRAS 2-4 / BRAF 15 genotype, trendy different in triple wt, compared with KRAS 2-4 / NRAS 2-4 / BRAF 15 ≥2 mut.
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- 2018