1. HCV eradication with IFN-based therapy does not completely restore gene expression in PBMCs from HIV/HCV-coinfected patients
- Author
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Brochado Kith, Óscar, Martínez, Isidoro, Berenguer, Juan, Medrano, Luz María, González-García, Juan, Jiménez-Sousa, María Ángeles, Carrero, Ana, Hontañón Antoñana, Víctor, Navarro, Jordi, Guardiola Tey, Jose Maria, Fernández-Rodríguez, Amanda, Resino, Salvador, Miralles, P., López, J.C., Parras, F., Padilla, B., Aldámiz-Echevarría, T, Tejerina, F., Díez, C., Pérez-Latorre, L., Fanciulli, C., Gutiérrez, I., Ramírez, M., Carretero, S., Bellón, J.M., Bermejo, Javier, Arribas, J. R., Montes, M.L., Bernardino, I., Pascual, J.F., Zamora, Francisco, Peña, J.M., Arnalich, F., Díaz, M., Domingo, Pere, Van den Eynde, E., Pérez, M., Ribera, E., Crespo, M., Casado, J.L., Dronda, F., Moreno, A., Pérez-Elías, M.J., Sanfrutos, M.A., Moreno, S., Quereda, C., Arranz, A., Casas, E., de Miguel, J., Schroeder, S., Sanz, J., Santos, I., Bustinduy, M.J., Iribarren, J.A., Rodríguez-Arrondo, F., Von-Wichmann, M.A., Vergas, J., Téllez, M.J., Vinuesa, D., Muñoz, L., Hernández-Quero, J., Ferrer, A., Galindo, M.J., Ortiz, L., Ortega, E., Montero, M., Blanes, M., Cuellar, S., Lacruz, J., Salavert, M., López-Aldeguer, J., Pérez, G., Gaspar, G., Yllescas, M., Crespo, P., Aznar, E., Esteban, H., Instituto de Salud Carlos III, European Regional Development Fund (ERDF/FEDER), Ministerio de Ciencia e Innovación, Unión Europea. Fondo Europeo de Desarrollo Regional (FEDER/ERDF), Ministerio de Ciencia e Innovación (España), Institut Català de la Salut, [Brochado Ó, Martínez I, Medrano L, Jiménez-Sousa MÁ] Unidad de Infección Viral E Inmunidad, Centro Nacional de Microbiología, Instituto de Salud Carlos III (Campus Majadahonda), Madrid, Spain. [Berenguer J] Unidad de Enfermedades Infecciosas/VIH, Hospital General Universitario 'Gregorio Marañón', Madrid, Spain. Instituto de Investigación Sanitaria del Gregorio Marañón, Madrid, Spain. [González-García J] Unidad de VIH, Servicio de Medicina Interna, Hospital Universitario 'La Paz', Madrid, Spain. Instituto de Investigacion Sanitaria La Paz (IdiPAZ), Madrid, Spain. [Navarro J] Servei de Malalties Infeccioses, Vall d’Hebron Hospital Universitari, Barcelona, Spain. Vall d’Hebron Institut de Recerca (VHIR), Barcelona, Spain, and Vall d'Hebron Barcelona Hospital Campus
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Male ,0301 basic medicine ,Endocrinology, Diabetes and Metabolism ,Clinical Biochemistry ,lcsh:Medicine ,Gene Expression ,HIV Infections ,Hepacivirus ,medicine.disease_cause ,0302 clinical medicine ,Interferon ,Medicine ,Pharmacology (medical) ,Other subheadings::/therapeutic use [Other subheadings] ,Interferon therapy ,Coinfection ,virus diseases ,Genetic Phenomena::Gene Expression [PHENOMENA AND PROCESSES] ,General Medicine ,Hepatitis C ,Middle Aged ,Interferó - Ús terapèutic ,Hepatocellular carcinoma ,Female ,030211 gastroenterology & hepatology ,medicine.drug ,Adult ,Hepatitis C virus ,Peripheral blood mononuclear cell ,Virus ,HCV clearance ,aminoácidos, péptidos y proteínas::péptidos::péptidos y proteínas de señalización intercelular::citocinas::interferones [COMPUESTOS QUÍMICOS Y DROGAS] ,03 medical and health sciences ,Amino Acids, Peptides, and Proteins::Peptides::Intercellular Signaling Peptides and Proteins::Cytokines::Interferons [CHEMICALS AND DRUGS] ,Immune system ,Humans ,Molecular Biology ,Virus Diseases::Coinfection [DISEASES] ,Otros calificadores::/uso terapéutico [Otros calificadores] ,business.industry ,virosis::coinfección [ENFERMEDADES] ,Research ,lcsh:R ,Biochemistry (medical) ,HIV ,Cell Biology ,medicine.disease ,Expressió gènica ,HIV/HCV coinfection ,030104 developmental biology ,Virosis ,PBMCs ,Immunology ,Leukocytes, Mononuclear ,Gene expression ,Interferons ,business ,fenómenos genéticos::expresión génica [FENÓMENOS Y PROCESOS] - Abstract
Coinfecció pel VIH/VHC; Sistema immunitari; Teràpia amb interferó Coinfección por VIH/VHC; Sistema inmunitario; Terapia con interferón HIV/HCV coinfection; Immune system; Interferon therapy Objective To evaluate the impact of hepatitis C virus (HCV) elimination via interferon (IFN)-based therapy on gene expression profiles related to the immune system in HIV/HCV-coinfected patients. Methods We conducted a prospective study in 28 HIV/HCV-coinfected patients receiving IFN-based therapy at baseline (HIV/HCV-b) and week 24 after sustained virological response (HIV/HCV-f). Twenty-seven HIV-monoinfected patients (HIV-mono) were included as a control. RNA-seq analysis was performed on peripheral blood mononuclear cells (PBMCs). Genes with a fold-change (FC) ≥ 1.5 (in either direction) and false discovery rate (FDR) ≤ 0.05 were identified as significantly differentially expressed (SDE). Results HIV/HCV-b showed six SDE genes compared to HIV-mono group, but no significantly enriched pathways were observed. For HIV/HCV-f vs. HIV/HCV-b, we found 58 SDE genes, 34 upregulated and 24 downregulated in the HIV/HCV-f group. Of these, the most overexpressed were CXCL2, PDCD6IP, ATP5B, IGSF9, RAB26, and CSRNP1, and the most downregulated were IFI44 and IFI44L. These 58 SDE genes revealed two significantly enriched pathways (FDR
- Published
- 2021
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