1. Characteristics of bacterial community and ARGs profile in engineered goldfish tanks with stresses of sulfanilamide and copper
- Author
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Yu-Jie Sun, Lin Zhu, Xin-Yi Shuai, Zhen-Chao Zhou, Lan Xu, Hong Chen, Ling-Xuan Meng, Christophe Niyungeko, Yang Liu, and Benjamin Makimilua Tiimub
- Subjects
medicine.drug_class ,Health, Toxicology and Mutagenesis ,Antibiotics ,010501 environmental sciences ,01 natural sciences ,Sulfanilamide ,Aquaculture ,Goldfish ,RNA, Ribosomal, 16S ,medicine ,Animals ,Environmental Chemistry ,Ecotoxicology ,Food science ,0105 earth and related environmental sciences ,Bacteria ,biology ,Phylum ,business.industry ,Drug Resistance, Microbial ,General Medicine ,biology.organism_classification ,16S ribosomal RNA ,Pollution ,Anti-Bacterial Agents ,Genes, Bacterial ,Chemical addition ,business ,Copper ,medicine.drug - Abstract
Abuse of antibiotics in aquaculture have been alarming and might aggravate spread of resistance genes in the environment. Holistic ARGs proliferation checks require deeper analyses of coupled absolute abundances in 16S rRNA bacteria communities at the phylum level to detect biomarkers. Sulfanilamide (sul) and copper II sulfate (CuSO4 II) were, therefore, designed and added as separate or combined treatments in 9 replicate engineered goldfish tanks comprising 3 individual sul, 3 CuSO4 II, 3 (sul + CuSO4 II) combinations, and 3 controls within 180 days. The DNA from water and fish guts was sequenced under qPCR to determine 16S rRNA bacteria biomarkers co-occurring with the correspondent ARGs. Combined chemical addition at 0.8–1.5 mg sul + 0.5–1.0 mg CuSO4 II/3 L of tank waters reduced sequenced 16S rRNA bacteria absolute abundances in fish gut and water samples while portraying the biomarkers. Absolute abundances of the entire 16S rRNA bacteria was higher in fish guts (3.4 × 1014–4.9 × 108 copies/g) than water samples (1.5 × 109–2.6 × 1015 copies/L), respectively. Much as sul 1(log) were dominant over intl 1(log) genes, and their fundamental profiles were also higher in the fish guts than water samples; the Spearman’s correlation analyses revealed positive relationship (p Proteobacteria (10–50:15–65%) > Planktomycetes (10–52:8–25%) featured prominently based on LEfSe use as the hot-spotted biomarkers, hence justifying its higher prospects towards innovative environmental microbiological and biotechnological studies.
- Published
- 2021