1. Dysregulated splicing factor SF3B1 unveils a dual therapeutic vulnerability to target pancreatic cancer cells and cancer stem cells with an anti-splicing drug
- Author
-
Claudio Luchini, Sonia Alcalá, Manuel D. Gahete, María T. Cano, Raúl M. Luque, Pablo Cabezas-Sainz, Justo P. Castaño, Laura Sánchez, Emilia Alors-Perez, Rita T. Lawlor, Fernando Abollo-Jiménez, Ricardo Blazquez-Encinas, Sergio Pedraza-Arevalo, Andrea Mafficini, Laura Martin-Hijano, Cristina Viyuela-García, Marina E. Sánchez-Frías, Sebastián Ventura, Álvaro Arjona-Sánchez, Vicente Herrero-Aguayo, Aldo Scarpa, Alejandro Ibáñez-Costa, Juan M. Sánchez-Hidalgo, Juan Antonio Marin-Sanz, Bruno Sainz, Juan M. Jiménez-Vacas, [Alors-Perez,E, Blázquez-Encinas,R, Viyuela-García,C, Pedraza-Arevalo,S, Herrero-Aguayo,V, Jiménez-Vacas,JM, Sánchez-Frías,ME, Cano,MT, Abollo-Jiménez,F, Marín-Sanz,JA, Sánchez-Hidalgo,JM, Ventura,S, Gahete,MD, Arjona-Sánchez,A, Ibáñez-Costa,A, Luque,RM, Castaño,JP] Maimonides Biomedical Research Institute of Cordoba (IMIBIC), Córdoba, Spain. [Alors-Perez,E, Castaño,JP] Department of Cell Biology, Physiology, and Immunology, University of Cordoba, Córdoba, Spain. [Alors-Perez,E, Castaño,JP] Reina Sofia University Hospital, Córdoba, Spain. [Alors-Perez,E, Castaño,JP] CIBER Fisiopatología de la Obesidad y Nutrición (CIBERobn), Edificio IMIBIC, Córdoba, Spain. [Alcalá,S, Martin-Hijano,L, Sainz,B] Department of Biochemistry, Universidad Autónoma de Madrid (UAM) and Department of Cancer Biology, Instituto de Investigaciones Biomédicas Alberto Sols (IIBM), CSIC-UAM, Madrid, Spain. [Alcalá,S, Martin-Hijano,L] Department of Cancer Biology, Chronic Diseases and Cancer Area 3-Instituto Ramón y Cajal de Investigación Sanitaria (IRYCIS), Madrid, Spain. [Viyuela-García,C, Arjona-Sánchez,A] Surgery Service, Reina Sofia University Hospital, Córdoba, Spain. [Mafficini,A, Lawlor,RT, Luchini,C, Scarpa,A] ARC-Net Research Centre, University and Hospital Trust of Verona, Verona, Italy. [Sánchez-Frías,ME] Pathology Service, Reina Sofia University Hospital, Córdoba, Spain. [Cano,MT] Medical Oncology Service, Reina Sofia University Hospital, Córdoba, Spain. [Abollo-Jiménez,F, Ventura,S] Department of Computer Sciences, University of Cordoba, Córdoba, Spain. [Cabezas-Sainz, Sánchez,L] Department of Zoology, Genetics and Physical Anthropology, University of Santiago de Compostela, Lugo, Spain. [Luchini,C, Scarpa,A] Department of Diagnostics and Public Health, Section of Pathology, University and Hospital Trust of Verona, Verona, Italy. [Sainz,B] Centro de Investigación Biomédica en Red, Área Cáncer, CIBERONC, ISCIII, Madrid, Spain, This work has been supported by Spanish Ministry of Economy [MINECO, BFU2016–80360-R (to JPC)] and Ministry of Science and Innovation [MICINN, PID2019-105201RB-I00 (to JPC), PID2019-105564RB-I00 (to RML)]. Instituto de Salud Carlos III, co-funded by European Union (ERDF/ESF, 'Investing in your future') [FIS Grants PI17/02287 and PI20/01301 (to MDG), PI18/00757 (to BS,Jr), DTS Grant DTS20/00050 (to RML)), Postdoctoral Grant Sara Borrell CD19/00255 (to AIC), Predoctoral contract FI17/00282 (to EAP)]. Coordinated grant (GC16173694BARB) from the Fundación Asociación Española Contra el Cáncer (AECC) (to BS,Jr). Spanish Ministry of Universities [Predoctoral contracts FPU14/04290 (to SPA), FPU16/06190 (to VHA), FPU18/02275 (to RBE)]. Boehringer Ingelheim Fonds travel grant (EAP). Junta de Andalucía (BIO-0139). GETNE2016 and GETNE2019 Research grants (to JPC), and CIBERobn. Associazione Italiana Ricerca Cancro (AIRC 5 × 1000 n. 12182), Fondazione Italiana Malattie Pancreas – Ministero Salute [FIMPCUP_J38D19000690001], Fondazione Cariverona: Oncology Biobank Project 'Antonio Schiavi' (prot. 203885/2017)., Ministerio de Economía y Competitividad (España), Ministerio de Ciencia, Innovación y Universidades (España), Agencia Estatal de Investigación (España), Instituto de Salud Carlos III, Asociación Española Contra el Cáncer, Junta de Andalucía, Associazione Italiana per la Ricerca sul Cancro, Ministero della Salute, and Fondazione Cariverona
- Subjects
cancer stem cells ,Male ,Diseases::Digestive System Diseases::Pancreatic Diseases::Pancreatic Neoplasms::Carcinoma, Pancreatic Ductal [Medical Subject Headings] ,Cancer Research ,endocrine system diseases ,Carcinoma, pancreatic ductal ,Pancreatic cancer ,Pladienolide-B ,SF3B1 ,Splicing-spliceosome ,Apoptosis ,Anatomy::Cells::Stem Cells::Neoplastic Stem Cells [Medical Subject Headings] ,medicine.disease_cause ,Organisms::Eukaryota::Animals::Chordata::Vertebrates::Mammals::Primates::Haplorhini::Catarrhini::Hominidae::Humans [Medical Subject Headings] ,Mice ,Anatomy::Cells::Cells, Cultured::Cell Line [Medical Subject Headings] ,Organisms::Eukaryota::Animals [Medical Subject Headings] ,Diseases::Neoplasms::Neoplasms by Histologic Type::Neoplasms, Glandular and Epithelial::Carcinoma::Adenocarcinoma [Medical Subject Headings] ,Zebrafish ,RC254-282 ,Cell proliferation ,Organisms::Eukaryota::Animals::Chordata::Vertebrates::Fishes::Cypriniformes::Cyprinidae::Zebrafish [Medical Subject Headings] ,Persons::Persons::Age Groups::Adult::Aged [Medical Subject Headings] ,biology ,Cancer stem cells ,Línea celular ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,Middle Aged ,Oncology ,RNA splicing ,Neoplastic Stem Cells ,Female ,Chemicals and Drugs::Amino Acids, Peptides, and Proteins::Proteins::Phosphoproteins [Medical Subject Headings] ,KRAS ,RNA Splicing Factors ,Carcinoma ductal pancreático ,Carcinoma, Pancreatic Ductal ,Adult ,Proliferación celular ,Analytical, Diagnostic and Therapeutic Techniques and Equipment::Therapeutics [Medical Subject Headings] ,Check Tags::Male [Medical Subject Headings] ,Adenocarcinoma ,Splicing factor ,Cancer stem cell ,medicine ,Animals ,Humans ,Persons::Persons::Age Groups::Adult [Medical Subject Headings] ,Phenomena and Processes::Cell Physiological Phenomena::Cell Physiological Processes::Cell Growth Processes::Cell Proliferation [Medical Subject Headings] ,Aged ,Células madre neoplásicas ,Organisms::Eukaryota::Animals::Chordata::Vertebrates::Mammals::Rodentia::Muridae::Murinae::Mice [Medical Subject Headings] ,Research ,Neoplasias pancreáticas ,Cancer ,Persons::Persons::Age Groups::Adult::Middle Aged [Medical Subject Headings] ,Empalmosomas ,medicine.disease ,biology.organism_classification ,Phosphoproteins ,digestive system diseases ,Diseases::Animal Diseases::Disease Models, Animal [Medical Subject Headings] ,Phenomena and Processes::Cell Physiological Phenomena::Cell Physiological Processes::Cell Death::Apoptosis [Medical Subject Headings] ,Diseases::Digestive System Diseases::Pancreatic Diseases::Pancreatic Neoplasms [Medical Subject Headings] ,Disease Models, Animal ,Check Tags::Female [Medical Subject Headings] ,Cancer cell ,Cancer research ,Cell line - Abstract
© The Author(s) 2021., [Background]: Pancreatic ductal adenocarcinoma (PDAC) is a highly lethal cancer, requiring novel treatments to target both cancer cells and cancer stem cells (CSCs). Altered splicing is emerging as both a novel cancer hallmark and an attractive therapeutic target. The core splicing factor SF3B1 is heavily altered in cancer and can be inhibited by Pladienolide-B, but its actionability in PDAC is unknown. We explored the presence and role of SF3B1 in PDAC and interrogated its potential as an actionable target. [Methods]: SF3B1 was analyzed in PDAC tissues, an RNA-seq dataset, and publicly available databases, examining associations with splicing alterations and key features/genes. Functional assays in PDAC cell lines and PDX-derived CSCs served to test Pladienolide-B treatment effects in vitro, and in vivo in zebrafish and mice. [Results]: SF3B1 was overexpressed in human PDAC and associated with tumor grade and lymph-node involvement. SF3B1 levels closely associated with distinct splicing event profiles and expression of key PDAC players (KRAS, TP53). In PDAC cells, Pladienolide-B increased apoptosis and decreased multiple tumor-related features, including cell proliferation, migration, and colony/sphere formation, altering AKT and JNK signaling, and favoring proapoptotic splicing variants (BCL-XS/BCL-XL, KRASa/KRAS, Δ133TP53/TP53). Importantly, Pladienolide-B similarly impaired CSCs, reducing their stemness capacity and increasing their sensitivity to chemotherapy. Pladienolide-B also reduced PDAC/CSCs xenograft tumor growth in vivo in zebrafish and in mice. [Conclusion]. SF3B1 overexpression represents a therapeutic vulnerability in PDAC, as altered splicing can be targeted with Pladienolide-B both in cancer cells and CSCs, paving the way for novel therapies for this lethal cancer., This work has been supported by Spanish Ministry of Economy [MINECO; BFU2016–80360-R (to JPC)] and Ministry of Science and Innovation [MICINN; PID2019-105201RB-I00 (to JPC), PID2019-105564RB-I00 (to RML)]. Instituto de Salud Carlos III, co-funded by European Union (ERDF/ESF, “Investing in your future”) [FIS Grants PI17/02287 and PI20/01301 (to MDG), PI18/00757 (to BS,Jr); DTS Grant DTS20/00050 (to RML)); Postdoctoral Grant Sara Borrell CD19/00255 (to AIC); Predoctoral contract FI17/00282 (to EAP)]. Coordinated grant (GC16173694BARB) from the Fundación Asociación Española Contra el Cáncer (AECC) (to BS,Jr). Spanish Ministry of Universities [Predoctoral contracts FPU14/04290 (to SPA); FPU16/06190 (to VHA); FPU18/02275 (to RBE)]. Boehringer Ingelheim Fonds travel grant (EAP). Junta de Andalucía (BIO0139). GETNE2016 and GETNE2019 Research grants (to JPC); and CIBERobn. Associazione Italiana Ricerca Cancro (AIRC 5×1000 n. 12182); Fondazione Italiana Malattie Pancreas – Ministero Salute [FIMPCUP_J38D19000690001]; Fondazione Cariverona: Oncology Biobank Project “Antonio Schiavi” (prot.203885/2017).
- Published
- 2021
- Full Text
- View/download PDF