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The full understanding of variation and temporal changes in carbon dioxide (CO2) fluxes in cropland may contribute to a reduction in CO2 emissions from agriculture. The aim of this study was to determine the CO2 exchange intensity in the three most popular crops in Poland. The CO2 fluxes in summer maize, winter oilseed rape and winter wheat fields were measured using the eddy covariance system. The seasonal dynamics of CO2 fluxes for all studied crops varied from each other due to individual dynamics in atmospheric CO2 assimilation of each species through the growing season. The weighted average values of CO2 fluxes calculated for the entire vegetation period were −22.22 µmol CO2 m−2 s−1, −14.27 µmol CO2 m−2 s−1 and −11.95 µmol CO2 m−2 s−1 for maize, oilseed rape and wheat, respectively. All the studied agro-ecosystems were carbon sinks during the growing season. The highest negative values of CO2 fluxes (−36.31 µmol CO2 m−2 s−1 and −33.56 µmol CO2 m−2 s−1) were observed in the maize field due to the high production of biomass. However, the maize field was also the most significant carbon source due to slow growth of plants at the beginning of the growing season, and due to leaving the field fallow after harvest until the next sowing. In these two periods, the CO2 fluxes ranged from 0.59 µmol CO2 m−2 s−1 to 3.72 µmol CO2 m−2 s−1. CO2 exchange over wheat and oilseed rape fields was less intense, but more even throughout the growing season. In the wheat field, the CO2 fluxes ranged from −1.70 µmol CO2 m−2 s−1 to −23.49 µmol CO2 m−2 s−1 and in the oilseed rape field they ranged from −1.40 µmol CO2 m−2 s−1 to −22.08 µmol CO2 m−2 s−1. In addition, the catch crop in the oilseed rape field contributed to the intensive absorption of CO2 after harvesting the main crop. [ABSTRACT FROM AUTHOR]