72 results on '"Christian Doerig"'
Search Results
2. Erythrocyte phospho-signalling is dynamically altered during infection with Plasmodium falciparum
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Jack D. Adderley and Christian Doerig
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malaria ,Biology ,Biochemistry, Genetics and Molecular Biology (miscellaneous) ,Microbiology ,Applied Microbiology and Biotechnology ,Plasmodium ,Virology ,Gene expression ,parasitic diseases ,Genetics ,host-pathogen interactions ,Protein kinase A ,Molecular Biology ,lcsh:QH301-705.5 ,Kinase ,Intracellular parasite ,Plasmodium falciparum ,protein kinase ,Cell Biology ,biology.organism_classification ,Cell biology ,Signalling ,lcsh:Biology (General) ,kinomics ,host-directed therapy hdt ,biology.protein ,Parasitology ,Antibody ,signaling - Abstract
It is well established that intracellular pathogens mobilise signalling pathways to manipulate gene expression of their host cell to promote their own survival. Surprisingly, there is evidence that specific host signalling molecules are likewise activated in a-nucleated erythrocytes in response to infection with malaria parasites. In this paper (Adderley et al., Nature Communications 2020), we report the system-wide assessment of host erythrocyte signalling during the course of infection with Plasmodium falciparum. This was achieved through the use of antibody microarrays containing >800 antibodies directed against human signalling proteins, which enabled us to interrogate the status of host erythrocyte signalling pathways at the ring, trophozoite and schizont stages of parasite development. This not only confirmed the pre-existing fragmentary data on the activation of a host erythrocyte PAK-MEK pathway, but also identified dynamic changes to many additional signalling elements, with trophozoite-infected erythrocytes displaying the largest mobilisation of host cell signalling. This study generated a comprehensive dataset on the modulation of host erythrocyte signalling during infection with P. falciparum, and provides the proof of principle that human protein kinases activated by Plasmodium infection represent attractive targets for antimalarial intervention.
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- 2020
3. Human Aurora kinase inhibitor Hesperadin reveals epistatic interaction between Plasmodium falciparum PfArk1 and PfNek1 kinases
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Lyn-Marie Birkholtz, Keith Al-Hasani, Mitchell B Batty, Belinda Joan Morahan, Jose F. Garcia-Bustos, Victoria C. Corey, Christian Doerig, Elizabeth A. Winzeler, Clarissa Abrie, Anne N. Cowell, and Jandeli Niemand
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0301 basic medicine ,Indoles ,Plasmodium falciparum ,Protozoan Proteins ,Druggability ,Aurora inhibitor ,Medicine (miscellaneous) ,Drug action ,Biology ,Article ,Chemical genetics ,General Biochemistry, Genetics and Molecular Biology ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Aurora Kinases ,Target identification ,Humans ,lcsh:QH301-705.5 ,Mitosis ,Sulfonamides ,Kinase ,Hesperadin ,Epistasis, Genetic ,biology.organism_classification ,Cell biology ,NIMA-Related Kinase 1 ,030104 developmental biology ,lcsh:Biology (General) ,chemistry ,030220 oncology & carcinogenesis ,General Agricultural and Biological Sciences ,NIMA-Related Kinases - Abstract
Mitosis has been validated by numerous anti-cancer drugs as being a druggable process, and selective inhibition of parasite proliferation provides an obvious opportunity for therapeutic intervention against malaria. Mitosis is controlled through the interplay between several protein kinases and phosphatases. We show here that inhibitors of human mitotic kinases belonging to the Aurora family inhibit P. falciparum proliferation in vitro with various potencies, and that a genetic selection for mutant parasites resistant to one of the drugs, Hesperadin, identifies a resistance mechanism mediated by a member of a different kinase family, PfNek1 (PF3D7_1228300). Intriguingly, loss of PfNek1 catalytic activity provides protection against drug action. This points to an undescribed functional interaction between Ark and Nek kinases and shows that existing inhibitors can be used to validate additional essential and druggable kinase functions in the parasite., Morahan et al. investigate inhibitors of human mitotic kinases in P. falciparum and show a resistance mechanism to the drug Hesperadin through an epistatic interaction between the PfArk1 and PfNek1 kinases. This study demonstrates that existing inhibitors can be used to validate additional essential and druggable kinase functions in the parasite.
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- 2020
4. Analysis of erythrocyte signalling pathways during Plasmodium falciparum infection identifies targets for host-directed antimalarial intervention
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Tom Metcalf, Danny W. Wilson, Sarah A. Jackson, Simona John von Freyend, Oliver Billker, Christian Doerig, Megan J. Bird, Jack D. Adderley, Amy L. Burns, Jean-Philippe Semblat, and Burcu Anar
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Proto-Oncogene Proteins B-raf ,0301 basic medicine ,MAPK/ERK pathway ,Infectious Medicine ,Erythrocytes ,Science ,Plasmodium falciparum ,Protein Array Analysis ,General Physics and Astronomy ,Kinases ,Infektionsmedicin ,02 engineering and technology ,Plasmodium ,Article ,General Biochemistry, Genetics and Molecular Biology ,Receptor tyrosine kinase ,Host-Parasite Interactions ,Antimalarials ,Inhibitory Concentration 50 ,03 medical and health sciences ,parasitic diseases ,Humans ,Malaria, Falciparum ,Phosphorylation ,lcsh:Science ,Protein Kinase Inhibitors ,Life Cycle Stages ,Multidisciplinary ,biology ,Kinase ,Intracellular parasite ,Immunology in the medical area ,General Chemistry ,Proto-Oncogene Proteins c-met ,021001 nanoscience & nanotechnology ,biology.organism_classification ,Malaria ,Cell biology ,030104 developmental biology ,Hepatocyte Growth Factor Receptor ,Immunologi inom det medicinska området ,biology.protein ,lcsh:Q ,Signal transduction ,0210 nano-technology ,Parasite host response ,Signal Transduction - Abstract
Intracellular pathogens mobilize host signaling pathways of their host cell to promote their own survival. Evidence is emerging that signal transduction elements are activated in a-nucleated erythrocytes in response to infection with malaria parasites, but the extent of this phenomenon remains unknown. Here, we fill this knowledge gap through a comprehensive and dynamic assessment of host erythrocyte signaling during infection with Plasmodium falciparum. We used arrays of 878 antibodies directed against human signaling proteins to interrogate the activation status of host erythrocyte phospho-signaling pathways at three blood stages of parasite asexual development. This analysis reveals a dynamic modulation of many host signalling proteins across parasite development. Here we focus on the hepatocyte growth factor receptor (c-MET) and the MAP kinase pathway component B-Raf, providing a proof of concept that human signaling kinases identified as activated by malaria infection represent attractive targets for antimalarial intervention., Plasmodium infection activates signaling pathways in a-nucleated erythrocytes. Here, Adderley et al. use a comprehensive antibody microarray to show that infection extensively modulates host cell signalling and that the host receptor tyrosine kinase c-MET supports Plasmodium falciparum proliferation.
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- 2020
5. Inducing controlled cell cycle arrest and re-entry during asexual proliferation of Plasmodium falciparum malaria parasites
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Hilde von Grüning, Jandeli Niemand, Bianca Brider, Werner Smidt, Riëtte van Biljon, Janette Reader, Clarissa Abrie, Annel Smit, Roelof Dj van Wyk, Lyn-Marie Birkholtz, Heather J. Painter, Manuel Llinás, Christian Doerig, and Katherine Clark
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DNA Replication ,0301 basic medicine ,Eflornithine ,Cell cycle checkpoint ,Cell division ,Plasmodium falciparum ,030106 microbiology ,Cell ,Protozoan Proteins ,lcsh:Medicine ,Biology ,Plasmodium ,Article ,03 medical and health sciences ,0302 clinical medicine ,Polyamines ,medicine ,NIMA-Related Kinases ,lcsh:Science ,Transcription factor ,030304 developmental biology ,0303 health sciences ,Multidisciplinary ,Cell Cycle ,lcsh:R ,Cell cycle ,medicine.disease ,biology.organism_classification ,3. Good health ,Cell biology ,DNA-Binding Proteins ,030104 developmental biology ,medicine.anatomical_structure ,Gene Expression Regulation ,030220 oncology & carcinogenesis ,lcsh:Q ,Malaria ,Transcription Factors - Abstract
The life cycle of the malaria parasitePlasmodium falciparumis tightly regulated, oscillating between stages of intense proliferation and quiescence. Cyclic 48-hour asexual replication ofPlasmodiumis markedly different from cell division in higher eukaryotes, and mechanistically poorly understood. Here, we report tight synchronisation of malaria parasites during the early phases of the cell cycle by exposure to DL-α-difluoromethylornithine (DFMO), which results in the depletion of polyamines. This induces an inescapable cell cycle arrest in G1(~15 hours post-invasion) by blocking G1/S transition. Cell cycle-arrested parasites enter a quiescent G0-like state but, upon addition of exogenous polyamines, re-initiate their cell cycle in a coordinated fashion. This ability to halt malaria parasites at a specific point in their cell cycle, and to subsequently trigger re-entry into the cell cycle, provides a valuable framework to investigate cell cycle regulation in these parasites. We therefore used gene expression analyses to show that re-entry into the cell cycle involves expression of Ca2+-sensitive (cdpk4andpk2)and mitotic kinases (nimaandark2),with deregulation of the pre-replicative complex associated with expression ofpk2. Changes in gene expression could be driven through transcription factors MYB1 and two ApiAP2 family members. This new approach to parasite synchronisation therefore expands our currently limited toolkit to investigate cell cycle regulation in malaria parasites.
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- 2018
6. Interaction of Plasmodium falciparum casein kinase 1 with components of host cell protein trafficking machinery
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Christian Doerig, Dominique Dorin-Semblat, Mitchell B Batty, Ralf B. Schittenhelm, and Jose F. Garcia-Bustos
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0301 basic medicine ,Immunoprecipitation ,Clinical Biochemistry ,Green Fluorescent Proteins ,Plasmodium falciparum ,Protozoan Proteins ,Biochemistry ,Mass Spectrometry ,03 medical and health sciences ,0302 clinical medicine ,Genetics ,medicine ,Guanine Nucleotide Exchange Factors ,Humans ,Kinome ,Secretion ,Malaria, Falciparum ,Molecular Biology ,Sorting Nexins ,biology ,Casein Kinase I ,Cell Membrane ,Cell Biology ,biology.organism_classification ,Cell biology ,Sorting nexin ,Red blood cell ,Protein Transport ,030104 developmental biology ,medicine.anatomical_structure ,030220 oncology & carcinogenesis ,Host-Pathogen Interactions ,Phosphorylation ,Casein kinase 1 - Abstract
A pool of Plasmodium falciparum casein kinase 1 (PfCK1) has been shown to localize to the host red blood cell (RBC) membrane and be secreted to the extracellular medium during trophozoite stage of development. We attempted to identify mechanisms for secretion of PfCK1 and its appearance on the RBC membrane. We found that two host proteins with established functions in membrane trafficking in higher eukaryotes, GTPase-activating protein and Vps9 domain-containing protein 1 (GAPVD1), and Sorting nexin 22, consistently co-purify with PfCK1, suggesting that the parasite utilizes trafficking pathways previously thought to be inactive in RBCs. Furthermore, reciprocal immunoprecipitation experiments with GAPVD1 identified parasite proteins suggestive of a protein recycling pathway hitherto only described in higher eukaryotes. Thus, we have identified components of a trafficking pathway involving parasite proteins that act in concert with host proteins, and which we hypothesize mediates trafficking of PfCK1 to the RBC during infection.
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- 2019
7. Characterization of Plasmodium falciparum Atypical Kinase PfPK7– Dependent Phosphoproteome
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Mark P. Jedrychowski, Steven P. Gygi, Ratna Chakrabarti, Dominique Dorin-Semblat, Edward L. Huttlin, Christian Doerig, Daniela Sebastiani, Bracken F. Roberts, Daniel T. Segarra, Debopam Chakrabarti, and Brittany N. Pease
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inorganic chemicals ,0301 basic medicine ,030102 biochemistry & molecular biology ,biology ,Kinase ,Phosphoproteomics ,Plasmodium falciparum ,General Chemistry ,biology.organism_classification ,Biochemistry ,Phenotype ,Cell biology ,enzymes and coenzymes (carbohydrates) ,03 medical and health sciences ,030104 developmental biology ,Cell culture ,Phosphorylation ,Signal transduction ,Protein kinase A - Abstract
PfPK7 is an “orphan” kinase displaying regions of homology to multiple protein kinase families. PfPK7 functions in regulating parasite proliferation/development as evident from the phenotype analysis of knockout parasites. Despite this regulatory role, the functions of PfPK7 in signaling pathways are not known. To better understand PfPK7-regulated phosphorylation events, we performed isobaric tag-based quantitative comparative phosphoproteomics of the schizont and segmenter stages from wild-type and pfpk7- parasite lines. This analysis identified 3,875 phosphorylation sites on 1,047 proteins. Among these phosphorylation events, 146 proteins with 239 phosphorylation sites displayed reduction in phosphorylation in the absence of PfPK7. Further analysis of the phosphopeptides revealed three motifs whose phosphorylation was down regulated in the pfpk7– cell line in both schizonts and segmenters. Decreased phosphorylation following loss of PfPK7 indicates that these proteins may function as direct substrates o...
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- 2018
8. Targeting of host cell receptor tyrosine kinases by intracellular pathogens
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Christian Doerig and Gholamreza Haqshenas
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media_common.quotation_subject ,Cell ,Intracellular Space ,Biochemistry ,Receptor tyrosine kinase ,03 medical and health sciences ,medicine ,Animals ,Humans ,Internalization ,Molecular Biology ,Pathogen ,Protein Kinase Inhibitors ,030304 developmental biology ,media_common ,0303 health sciences ,biology ,Host (biology) ,Intracellular parasite ,030302 biochemistry & molecular biology ,Cell Membrane ,Receptor Protein-Tyrosine Kinases ,Cell Biology ,Bacterial Infections ,Cell biology ,medicine.anatomical_structure ,Virus Diseases ,Host-Pathogen Interactions ,biology.protein ,Signal transduction ,Intracellular ,Signal Transduction - Abstract
Intracellular pathogens use complex and tightly regulated processes to enter host cells. Upon initial interactions with signaling proteins at the surface of target cells, intracellular microbes activate and co-opt specific host signaling pathways that mediate cell surface-cytosol communications to facilitate pathogen internalization. Here, we discuss the roles of host receptor tyrosine kinases (RTKs) in the establishment of productive infections by major intracellular pathogens. We evaluate the gaps in the current understanding of this process and propose a comprehensive approach for assessing the role of host cell signaling in the biology of intracellular microorganisms and viruses. We also discuss RTK-targeting strategies for the treatment of various infections.
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- 2019
9. Phosphorylation of the VAR2CSA extracellular region is associated with enhanced adhesive properties to the placental receptor CSA
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Dominique Dorin-Semblat, Marilou Tétard, Aurélie Claës, Jean-Philippe Semblat, Sébastien Dechavanne, Zaineb Fourati, Romain Hamelin, Florence Armand, Graziella Matesic, Sofia Nunes-Silva, Anand Srivastava, Stéphane Gangnard, Jose-Juan Lopez-Rubio, Marc Moniatte, Christian Doerig, Artur Scherf, Benoît Gamain, Biologie Intégrée du Globule Rouge (BIGR (UMR_S_1134 / U1134)), Institut National de la Transfusion Sanguine [Paris] (INTS)-Université Paris Diderot - Paris 7 (UPD7)-Université de La Réunion (UR)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Université des Antilles (UA), Institut National de la Transfusion Sanguine [Paris] (INTS), Biologie des Interactions Hôte-Parasite - Biology of Host-Parasite Interactions, Institut Pasteur [Paris] (IP)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), Proteomics Core Facility [Lausanne, Suisse], Ecole Polytechnique Fédérale de Lausanne (EPFL), Maladies infectieuses et vecteurs : écologie, génétique, évolution et contrôle (MIVEGEC), Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD [France-Sud]), Centre for Chronic Infectious and Inflammation Disease [Bundoora, VIC, Australie], Biomedical Sciences Cluster [Bundoora, VIC, Australie], School of Health and Biomedical Sciences [Bundoora, VIC, Australie], Royal Melbourne Institute of Technology University (RMIT University)-Royal Melbourne Institute of Technology University (RMIT University)-School of Health and Biomedical Sciences [Bundoora, VIC, Australie], Royal Melbourne Institute of Technology University (RMIT University)-Royal Melbourne Institute of Technology University (RMIT University), This work is supported by the French National Research Agency (ANR-16-CE11-0014-01), grants from Laboratory of Excellence GR-Ex, reference ANR-11-LABX-0051 and the French Parasitology consortium ParaFrap (ANR-11-LABX0024). The labex GR-Ex is funded by the program 'Investissements d’avenir' of the French National Research Agency, reference ANR-11-IDEX-0005-02., ANR-16-CE11-0014,STRUCT-4-PAM,Analyse structurale et fonctionnelle des processus adhésifs associés au paludisme gestationnel(2016), ANR-11-IDEX-0005,USPC,Université Sorbonne Paris Cité(2011), ANR-11-LABX-0024,ParaFrap,Alliance française contre les maladies parasitaires(2011), Centre for Molecular Parasitology, University of Glasgow-Wellcome Trust, Institute of Biochemistry [ETH Zürich], Department of Biology [ETH Zürich] (D-BIOL), Eidgenössische Technische Hochschule - Swiss Federal Institute of Technology in Zürich [Zürich] (ETH Zürich)-Eidgenössische Technische Hochschule - Swiss Federal Institute of Technology in Zürich [Zürich] (ETH Zürich), Gènes et pression artérielle (Inserm U772), Collège de France (CdF)-Université Paris Descartes - Paris 5 (UPD5)-Institut National de la Santé et de la Recherche Médicale (INSERM), Biologie Intégrée du Globule Rouge (BIGR), Université des Antilles (UA)-CHU Pointe-à-Pitre/Abymes [Guadeloupe] -Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de La Réunion (UR)-Université Paris Diderot - Paris 7 (UPD7)-Institut National de la Transfusion Sanguine [Paris] (INTS), Laboratoire de Biochimie de l'Ecole polytechnique (BIOC), École polytechnique (X)-Centre National de la Recherche Scientifique (CNRS), Proteomics Core Facility, Institut de biologie de l'ENS Paris (UMR 8197/1024) (IBENS), Département de Biologie - ENS Paris, École normale supérieure - Paris (ENS Paris)-École normale supérieure - Paris (ENS Paris)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), Controle de la Proliferation Cellulaire Chez Plasmodium Falciparum, Institut National de la Santé et de la Recherche Médicale (INSERM), Biologie des Interactions Hôte-Parasite, Institut Pasteur [Paris]-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), Bodescot, Myriam, Analyse structurale et fonctionnelle des processus adhésifs associés au paludisme gestationnel - - STRUCT-4-PAM2016 - ANR-16-CE11-0014 - AAPG2016 - VALID, Université Sorbonne Paris Cité - - USPC2011 - ANR-11-IDEX-0005 - IDEX - VALID, Laboratoires d'excellence - Alliance française contre les maladies parasitaires - - ParaFrap2011 - ANR-11-LABX-0024 - LABX - VALID, Génétique et évolution des maladies infectieuses (GEMI), and Institut National de la Santé et de la Recherche Médicale (INSERM)-Institut Pasteur [Paris]-Centre National de la Recherche Scientifique (CNRS)
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Plasmodium ,binding ,Erythrocytes ,Physiology ,Placenta ,Cell Culture Techniques ,Protozoan Proteins ,Biochemistry ,Database and Informatics Methods ,Pregnancy ,Animal Cells ,Red Blood Cells ,Immune Physiology ,Medicine and Health Sciences ,Biology (General) ,Malaria, Falciparum ,Phosphorylation ,Post-Translational Modification ,ComputingMilieux_MISCELLANEOUS ,chondroitin sulfate ,Protozoans ,Immune System Proteins ,Malarial Parasites ,Eukaryota ,Antigenic Variation ,Recombinant Proteins ,Enzymes ,Plasmodium Falciparum ,[SDV.MP]Life Sciences [q-bio]/Microbiology and Parasitology ,Female ,Cellular Types ,Sequence Analysis ,Protein Binding ,Research Article ,QH301-705.5 ,Bioinformatics ,Immunology ,Antigens, Protozoan ,[SDV.BC]Life Sciences [q-bio]/Cellular Biology ,Research and Analysis Methods ,Cell Line ,var genes ,Sequence Motif Analysis ,expression ,Parasite Groups ,parasitic diseases ,Animals ,Humans ,Parasites ,[SDV.BBM]Life Sciences [q-bio]/Biochemistry, Molecular Biology ,Antigens ,[SDV.MP] Life Sciences [q-bio]/Microbiology and Parasitology ,[SDV.BC] Life Sciences [q-bio]/Cellular Biology ,Blood Cells ,Phosphatases ,Organisms ,Biology and Life Sciences ,Proteins ,pfemp1 ,Cell Biology ,Parasitic Protozoans ,Malaria ,cytoadherence ,Enzymology ,Parasitology ,plasmodium-falciparum ,Apicomplexa - Abstract
Plasmodium falciparum is the main cause of disease and death from malaria. P. falciparum virulence resides in the ability of infected erythrocytes (IEs) to sequester in various tissues through the interaction between members of the polymorphic P. falciparum erythrocyte membrane protein 1 (PfEMP1) adhesin family to various host receptors. Here, we investigated the effect of phosphorylation of variant surface antigen 2-CSA (VAR2CSA), a member of the PfEMP1 family associated to placental sequestration, on its capacity to adhere to chondroitin sulfate A (CSA) present on the placental syncytium. We showed that phosphatase treatment of IEs impairs cytoadhesion to CSA. MS analysis of recombinant VAR2CSA phosphosites prior to and after phosphatase treatment, as well as of native VAR2CSA expressed on IEs, identified critical phosphoresidues associated with CSA binding. Site-directed mutagenesis on recombinant VAR2CSA of 3 phosphoresidues localised within the CSA-binding region confirmed in vitro their functional importance. Furthermore, using clustered regularly interspaced short palindromic repeats/CRISPR-associated protein-9 nuclease (CRISPR/Cas9), we generated a parasite line in which the phosphoresidue T934 is changed to alanine and showed that this mutation strongly impairs IEs cytoadhesion to CSA. Taken together, these results demonstrate that phosphorylation of the extracellular region of VAR2CSA plays a major role in IEs cytoadhesion to CSA and provide new molecular insights for strategies aiming to reduce the morbidity and mortality of PM., Placental sequestration of malaria-infected erythrocytes is mediated by the interaction between parasite VAR2CSA and the placental receptor chondroitin sulfate A; this study shows that phosphorylation of VAR2CSA plays a major role in this process, with implications for protecting pregnant women and their babies against placental malaria.
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- 2019
10. Interaction ofPlasmodium falciparumCasein kinase 1 (PfCK1) with components of host cell protein trafficking machinery
- Author
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Christian Doerig, Ralf B. Schittenhelm, Mitchell B Batty, and Jose F. Garcia-Bustos
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Sorting nexin ,Membrane protein ,biology ,Immunoprecipitation ,Extracellular ,Parasite hosting ,Secretion ,Plasmodium falciparum ,Casein kinase 1 ,biology.organism_classification ,Cell biology - Abstract
During infection, thePlasmodium falciparumcasein kinase 1 (PfCK1) is secreted to the extracellular medium and appears on the RBC membrane during trophozoite stage of development. We attempted to identify a mechanism that describes the secretion of PfCK1 and its appearance on the RBC membrane and suspected a mechanism involving multiple host proteins may be utilised. Indeed, we found that the host proteins GTPase-activating protein and Vps9 domain-containing protein (GAPVD1) and Sorting nexin 22 (SNX22), which have described functions in membrane trafficking in higher eukaryotes, consistently co-purify with PfCK1 suggesting the parasite utilises trafficking pathways previously thought to be inactive in RBCs. Further, reciprocal immunoprecipitation experiments with GAPVD1 identified parasite proteins suggestive of a recycling pathway hitherto only described in higher eukaryotes to recycle membrane proteins. Thus, we have identified components of a trafficking pathway involving parasite proteins that act in concert with host proteins which we hypothesise coordinate the trafficking of PfCK1 during infection.
- Published
- 2019
11. The ins and outs of phosphosignalling in Plasmodium: Parasite regulation and host cell manipulation
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Teresa Carvalho, Jose F. Garcia-Bustos, Christian Doerig, Belinda Joan Morahan, Phillippe Boeuf, Simona John von Freyend, and Georges E. Grau
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0301 basic medicine ,Plasmodium ,030106 microbiology ,Protozoan Proteins ,Biology ,03 medical and health sciences ,parasitic diseases ,medicine ,Animals ,Humans ,Parasite hosting ,Phosphorylation ,Molecular Biology ,Regulation of gene expression ,Plasmodium (life cycle) ,Host (biology) ,Plasmodium parasite ,medicine.disease ,biology.organism_classification ,Cell biology ,030104 developmental biology ,Signalling ,Gene Expression Regulation ,Host-Pathogen Interactions ,Parasitology ,Signal transduction ,Protein Processing, Post-Translational ,Malaria ,Signal Transduction - Abstract
Signal transduction and kinomics have been rapidly expanding areas of investigation within the malaria research field. Here, we provide an overview of phosphosignalling pathways that operate in all stages of the Plasmodium life cycle. We review signalling pathways in the parasite itself, in the cells it invades, and in other cells of the vertebrate host with which it interacts. We also discuss the potential of these pathways as novel targets for antimalarial intervention.
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- 2016
12. The conserved apicomplexan Aurora kinase TgArk3 is involved in endodyogeny, duplication rate and parasite virulence
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Chun-Ti Chen, Yann Bordat, Christian Doerig, Wassim Daher, Maryse Lebrun, Hiba El Hajj, Laurence Berry, Marc-Jan Gubbels, Luc Reininger, Juliette Morlon-Guyot, and Teresa Carvalho
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0301 basic medicine ,Genetics ,Cell division ,030106 microbiology ,Immunology ,Cell cycle ,Biology ,Microbiology ,Spindle apparatus ,Cell biology ,Schizogony ,03 medical and health sciences ,030104 developmental biology ,Aurora kinase ,Centrosome ,Virology ,parasitic diseases ,Mitosis ,Cytokinesis - Abstract
Aurora kinases are eukaryotic serine/threonine protein kinases that regulate key events associated with chromatin condensation, centrosome and spindle function and cytokinesis. Elucidating the roles of Aurora kinases in apicomplexan parasites is crucial to understand the cell cycle control during Plasmodium schizogony or Toxoplasma endodyogeny. Here, we report on the localization of two previously uncharacterized Toxoplasma Aurora-related kinases (Ark2 and Ark3) in tachyzoites and of the uncharacterized Ark3 orthologue in Plasmodium falciparum erythrocytic stages. In Toxoplasma gondii, we show that TgArk2 and TgArk3 concentrate at specific sub-cellular structures linked to parasite division: the mitotic spindle and intranuclear mitotic structures (TgArk2), and the outer core of the centrosome and the budding daughter cells cytoskeleton (TgArk3). By tagging the endogenous PfArk3 gene with the green fluorescent protein in live parasites, we show that PfArk3 protein expression peaks late in schizogony and localizes at the periphery of budding schizonts. Disruption of the TgArk2 gene reveals no essential function for tachyzoite propagation in vitro, which is surprising giving that the P. falciparum and P. berghei orthologues are essential for erythrocyte schizogony. In contrast, knock-down of TgArk3 protein results in pronounced defects in parasite division and a major growth deficiency. TgArk3-depleted parasites display several defects, such as reduced parasite growth rate, delayed egress and parasite duplication, defect in rosette formation, reduced parasite size and invasion efficiency and lack of virulence in mice. Our study provides new insights into cell cycle control in Toxoplasma and malaria parasites and highlights Aurora kinase 3 as potential drug target.
- Published
- 2016
13. Validation of the protein kinase PfCLK3 as a multi-stage cross species malarial drug target
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Yevgeniya Antonova-Koch, Nicolas M. B. Brancucci, Kate Dudek, Kathryn Crouch, Cleofé Zapatero, Nelson V. Simwela, Matthias Marti, Andrew B. Tobin, Jude Akinwale, Lev Solyakov, Erika L. Flannery, Carolyn J.P. Jones, Mahmood M. Alam, Kopano Mapesa, Francisco-Javier Gamo, Maria Jesús Lafuente, Amit Mahindra, Elizabeth A. Winzeler, León Elena Fernandez Alvaro, Andrew P. Waters, María Jesús Vázquez, Christian Doerig, Ana Sanchez-Azqueta, María Luisa León, Andrew G. Jamieson, Davis Nwakanma, Omar Janha, Gonzalo Colmenarejo, and Deborah Mitcheson
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0303 health sciences ,biology ,030306 microbiology ,Druggability ,Plasmodium falciparum ,biology.organism_classification ,3. Good health ,Cell biology ,Transcriptome ,03 medical and health sciences ,RNA splicing ,Gametocyte ,Parasite hosting ,Protein kinase A ,Gene ,030304 developmental biology - Abstract
The requirement for next generation anti-malarials to be both curative and transmission blockers necessitate the identification of molecular pathways essential for viability of both asexual and sexual parasite life stages. Here we identify a selective inhibitor to the Plasmodium falciparum protein kinase PfCLK3 which we use in combination with chemogenetics, whole genome sequencing and transcriptomics to validate PfCLK3 as a druggable target acting at multiple parasite life stages. Consistent with the proposed role of PfCLK3 as a regulator of RNA splicing, inhibition results in the down-regulation of >400 genes essential for parasite survival. Through this mechanism, blocking PfCLK3 activity not only results in rapid killing of asexual blood stage parasites but is also effective on sporozoites and gametocytes as well as showing parasiticidal activity in all Plasmodium species tested. Hence, our data establishes PfCLK3 as a target with the potential to deliver both symptomatic treatment and transmission blocking in malaria.
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- 2018
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14. Host cell kinases and the hepatitis C virus life cycle
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Joachim Lupberger, Christian Doerig, Thomas F. Baumert, and Che C. Colpitts
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Receptor complex ,viruses ,Biophysics ,Hepacivirus ,Viral Nonstructural Proteins ,Biology ,Biochemistry ,Analytical Chemistry ,Minor Histocompatibility Antigens ,Viral life cycle ,Viral entry ,Lipid droplet ,Animals ,Humans ,Molecular Biology ,Life Cycle Stages ,Kinase ,Receptor, EphA2 ,Virus Assembly ,virus diseases ,Virus Internalization ,Hepatitis C ,Virology ,digestive system diseases ,Cell biology ,ErbB Receptors ,NS2-3 protease ,Phosphotransferases (Alcohol Group Acceptor) ,Virion assembly ,Host-Pathogen Interactions ,Hepatocytes ,Phosphorylation - Abstract
Hepatitis C virus (HCV) infection relies on virus-host interactions with human hepatocytes, a context in which host cell kinases play critical roles in every step of the HCV life cycle. During viral entry, cellular kinases, including EGFR, EphA2 and PKA, regulate the localization of host HCV entry factors and induce receptor complex assembly. Following virion internalization, viral genomes replicate on endoplasmic reticulum-derived membranous webs. The formation of membranous webs depends on interactions between the HCV NS5a protein and PI4KIIIα. The phosphorylation status of NS5a, regulated by PI4KIIIα, CKI and other kinases, also acts as a molecular switch to virion assembly, which takes place on lipid droplets. The formation of lipid droplets is enhanced by HCV activation of IKKα. In view of the multiple crucial steps in the viral life cycle that are mediated by host cell kinases, these enzymes also represent complementary targets for antiviral therapy. This article is part of a Special Issue entitled: Inhibitors of Protein Kinases.
- Published
- 2015
15. Regulation of <scp> P </scp> lasmodium falciparum <scp>O</scp> rigin <scp>R</scp> ecognition <scp>C</scp> omplex subunit 1 ( <scp>PfORC</scp> 1) function through phosphorylation mediated by <scp>CDK</scp> ‐like kinase <scp>PK</scp> 5
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Nidhi Gupta, Suman Kumar Dhar, Parul Mehra, Abhijit S. Deshmukh, Ashish Gupta, Meetu Agarwal, and Christian Doerig
- Subjects
biology ,Eukaryotic DNA replication ,Pre-replication complex ,Microbiology ,Molecular biology ,Cell biology ,DNA replication factor CDT1 ,Replication factor C ,Licensing factor ,Control of chromosome duplication ,biology.protein ,Origin recognition complex ,ORC1 ,Molecular Biology - Abstract
Plasmodium falciparum Origin Recognition Complex subunit 1 (PfORC1) has been implicated in DNA replication and var gene regulation. While the C-terminus is involved in DNA replication, the specific role of N-terminus has been suggested in var gene regulation in a Sir2-dependent manner. PfORC1 is localized at the nuclear periphery, where the clustering of chromosomal ends at the early stage of parasite development may be crucial for the regulation of subtelomeric var gene expression. Upon disassembly of telomeric clusters at later stages of parasite development, ORC1 is distributed in the nucleus and parasite cytoplasm where it may be required for its other cellular functions including DNA replication. The level of ORC1 decreases dramatically at the late schizont stage. The mechanisms that mediate regulation of PfORC1 function are largely unknown. Here we show, by the use of recombinant proteins and of transgenic parasites expressing wild type or mutant forms of ORC1, that phosphorylation of the PfORC1-N terminal domain by the cyclin-dependent kinase (CDK) PfPK5 abolishes DNA-binding activity and leads to changes in subcellular localization and proteasome-mediated degradation of the protein in schizonts. These results reveal that PfORC1 phosphorylation by a CDK is central to the regulation of important biological functions like DNA replication and var gene silencing.
- Published
- 2015
16. Post-translational protein modifications in malaria parasites
- Author
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Christian Doerig, Julian C. Rayner, Andrew B. Tobin, and Artur Scherf
- Subjects
Regulation of gene expression ,Plasmodium ,Cell signaling ,General Immunology and Microbiology ,Drug discovery ,Protozoan Proteins ,Lipid-anchored protein ,Biology ,Adaptation, Physiological ,Microbiology ,Antiparasitic agent ,Epigenesis, Genetic ,Cell biology ,Infectious Diseases ,Gene Expression Regulation ,Phosphorylation ,Epigenetics ,Protein Processing, Post-Translational ,Epigenesis - Abstract
Post-translational modifications play crucial parts in regulating protein function and thereby control several fundamental aspects of eukaryotic biology, including cell signalling, protein trafficking, epigenetic control of gene expression, cell-cell interactions, and cell proliferation and differentiation. In this Review, we discuss protein modifications that have been shown to have a key role in malaria parasite biology and pathogenesis. We focus on phosphorylation, acetylation, methylation and lipidation. We provide an overview of the biological significance of these modifications and discuss prospects and progress in antimalarial drug discovery based on the inhibition of the enzymes that mediate these modifications.
- Published
- 2015
17. Subverting Host Cell P21-Activated Kinase: A Case of Convergent Evolution across Pathogens
- Author
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Jean Philippe Semblat, Hans Jurgen Netter, Simona John von Freyend, Christian Doerig, Terry Kwok-Schuelein, and Gholamreza Haqshenas
- Subjects
0301 basic medicine ,Microbiology (medical) ,kinase ,030106 microbiology ,lcsh:Medicine ,Computational biology ,Review ,virus ,Biology ,Virus ,03 medical and health sciences ,PAK1 ,Immune system ,Immunology and Allergy ,host-pathogen interactions ,signalling ,bacteria ,Molecular Biology ,Pathogen ,General Immunology and Microbiology ,Kinase ,Drug discovery ,Intracellular parasite ,lcsh:R ,3. Good health ,Cell biology ,Infectious Diseases ,Infectious disease (medical specialty) ,parasite - Abstract
Intracellular pathogens have evolved a wide range of strategies to not only escape from the immune systems of their hosts, but also to directly exploit a variety of host factors to facilitate the infection process. One such strategy is to subvert host cell signalling pathways to the advantage of the pathogen. Recent research has highlighted that the human serine/threonine kinase PAK, or p21-activated kinase, is a central component of host-pathogen interactions in many infection systems involving viruses, bacteria, and eukaryotic pathogens. PAK paralogues are found in most mammalian tissues, where they play vital roles in a wide range of functions. The role of PAKs in cell proliferation and survival, and their involvement in a number of cancers, is of great interest in the context of drug discovery. In this review we discuss the latest insights into the surprisingly central role human PAK1 plays for the infection by such different infectious disease agents as viruses, bacteria, and parasitic protists. It is our intention to open serious discussion on the applicability of PAK inhibitors for the treatment, not only of neoplastic diseases, which is currently the primary objective of drug discovery research targeting these enzymes, but also of a wide range of infectious diseases.
- Published
- 2017
18. Signalome-wide assessment of host cell response to hepatitis C virus
- Author
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Hans J Netter, Gholamreza Haqshenas, Roger J. Daly, Kaylene J. Simpson, Christian Doerig, Jianmin Wu, Thomas F. Baumert, Institut de Recherche sur les Maladies Virales et Hépatiques (IVH), Université de Strasbourg (UNISTRA)-Institut National de la Santé et de la Recherche Médicale (INSERM), Monash University [Clayton], Garvan Institute of medical research, University of New South Wales [Sydney] (UNSW), Peking University [Beijing], Peter MacCallum Cancer Centre [East Melbourne, Australia], University of Melbourne, The Peter Doherty Institute for Infection and Immunity [Melbourne], University of Melbourne-The Royal Melbourne Hospital, L'Institut hospitalo-universitaire de Strasbourg (IHU Strasbourg), Institut National de Recherche en Informatique et en Automatique (Inria)-l'Institut de Recherche contre les Cancers de l'Appareil Digestif (IRCAD)-Les Hôpitaux Universitaires de Strasbourg (HUS)-La Fédération des Crédits Mutuels Centre Est (FCMCE)-L'Association pour la Recherche contre le Cancer (ARC)-La société Karl STORZ, and Les Hôpitaux Universitaires de Strasbourg (HUS)
- Subjects
0301 basic medicine ,MAPK/ERK pathway ,Cell signaling ,Science ,Aucun ,General Physics and Astronomy ,Hepacivirus ,Biology ,Sciences du Vivant [q-bio]/Médecine humaine et pathologie ,Virus Replication ,General Biochemistry, Genetics and Molecular Biology ,Article ,Hepatitis C/genetics/*metabolism/virology ,03 medical and health sciences ,0302 clinical medicine ,STAT5 Transcription Factor/genetics/metabolism ,RNA interference ,STAT5 Transcription Factor ,Humans ,Phosphorylation ,STAT5 ,Janus Kinases ,Janus Kinases/genetics/metabolism ,Multidisciplinary ,Kinase ,Intracellular parasite ,Hepacivirus/genetics/*physiology ,NF-kappa B ,General Chemistry ,NF-kappa B/genetics/metabolism ,Virology ,Hepatitis C ,Signal Transduction ,3. Good health ,Cell biology ,030104 developmental biology ,Viral replication ,030220 oncology & carcinogenesis ,Host-Pathogen Interactions ,biology.protein ,Signal transduction ,[SDV.MHEP]Life Sciences [q-bio]/Human health and pathology - Abstract
Host cell signalling during infection with intracellular pathogens remains poorly understood. Here we report on the use of antibody microarray technology to detect variations in the expression levels and phosphorylation status of host cell signalling proteins during hepatitis C virus (HCV) replication. Following transfection with HCV RNA, the JNK and NF-κB pathways are suppressed, while the JAK/STAT5 pathway is activated; furthermore, components of the apoptosis and cell cycle control machineries are affected in the expression and/or phosphorylation status. RNAi-based hit validation identifies components of the JAK/STAT, NF-κB, MAPK and calcium-induced pathways as modulators of HCV replication. Selective chemical inhibition of one of the identified targets, the JNK activator kinase MAP4K2, does impair HCV replication. Thus this study provides a comprehensive picture of host cell pathway mobilization by HCV and uncovers potential therapeutic targets. The strategy of identifying targets for anti-infective intervention within the host cell signalome can be applied to any intracellular pathogen., Development of antiviral strategies depends on an understanding of virus–host interactions. Here, using HCV, Haqshenas et al. show that antibody microarray combined with a targeted siRNA screen can be a powerful tool to identify cellular signalling pathways that are important for virus replication.
- Published
- 2017
19. Regulation of Plasmodium falciparum Development by Calcium-dependent Protein Kinase 7 (PfCDPK7)
- Author
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Anuj Tripathi, Praveen Kumar, Christian Doerig, Ravikant Ranjan, Tim W. Gilberger, Jean Halbert, and Pushkar Sharma
- Subjects
Phosphatidylinositol 4,5-Diphosphate ,Architecture domain ,Genes, Protozoan ,Plasmodium falciparum ,Protozoan Proteins ,Second Messenger Systems ,Biochemistry ,Gene Expression Regulation, Enzymologic ,Animals, Genetically Modified ,Gene Knockout Techniques ,parasitic diseases ,Animals ,Protein Interaction Domains and Motifs ,Protein kinase A ,Molecular Biology ,biology ,Effector ,Kinase ,Gene Expression Regulation, Developmental ,Cell Biology ,biology.organism_classification ,Recombinant Proteins ,Cell biology ,Pleckstrin homology domain ,Protein kinase domain ,Second messenger system ,Protein Kinases ,Signal Transduction - Abstract
Second messengers such as phosphoinositides and calcium are known to control diverse processes involved in the development of malaria parasites. However, the underlying molecular mechanisms and pathways need to be unraveled, which may be achieved by understanding the regulation of effectors of these second messengers. Calcium-dependent protein kinase (CDPK) family members regulate diverse parasitic processes. Because CDPKs are absent from the host, these kinases are considered as potential drug targets. We have dissected the function of an atypical CDPK from Plasmodium falciparum, PfCDPK7. The domain architecture of PfCDPK7 is very different from that of other CDPKs; it has a pleckstrin homology domain adjacent to the kinase domain and two calcium-binding EF-hands at its N terminus. We demonstrate that PfCDPK7 interacts with PI(4,5)P-2 via its pleckstrin homology domain, which may guide its subcellular localization. Disruption of PfCDPK7 caused a marked reduction in the growth of the blood stage parasites, as maturation of rings to trophozoites was markedly stalled. In addition, parasite proliferation was significantly attenuated. These findings shed light on an important role for PfCDPK7 in the erythrocytic asexual cycle of malaria parasites.
- Published
- 2014
20. Nima- and Aurora-related kinases of malaria parasites
- Author
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Luc Reininger, Teresa Carvalho, and Christian Doerig
- Subjects
Plasmodium falciparum ,Protozoan Proteins ,Biophysics ,Aurora inhibitor ,Cell Cycle Proteins ,Polo-like kinase ,Protein Serine-Threonine Kinases ,Biology ,Biochemistry ,Analytical Chemistry ,Antimalarials ,Aurora kinase ,Aurora Kinases ,Cyclin-dependent kinase ,Humans ,Kinome ,Protein Kinase Inhibitors ,Molecular Biology ,Genetics ,Kinase ,Cell cycle ,Malaria ,Cell biology ,Isoenzymes ,NIMA-Related Kinase 1 ,biology.protein ,NIMA-Related Kinases - Abstract
Completion of the life cycle of malaria parasite requires a succession of developmental stages which vary greatly with respect to proliferation status, implying a tightly regulated control of the parasite's cell cycle, which remains to be understood at the molecular level. Progression of the eukaryotic cell cycle is controlled by members of mitotic kinase of the families CDK (cyclin-dependent kinases), Aurora, Polo and NIMA. Plasmodium parasites possess cyclin-dependent protein kinases and cyclins, which strongly suggests that some of the principles underlying cell cycle control in higher eukaryotes also operate in this organism. However, atypical features of Plasmodium cell cycle organization and important divergences in the composition of the cell cycle machinery suggest the existence of regulatory mechanisms that are at variance with those of higher eukaryotes. This review focuses on several recently described Plasmodium protein kinases related to the NIMA and Aurora kinase families and discusses their functional involvement in parasite's biology. Given their demonstrated essential roles in the erythrocytic asexual cycle and/or sexual stages, these enzymes represent novel potential drug targets for antimalarial intervention aiming at inhibiting parasite replication and/or blocking transmission of the disease. This article is part of a Special Issue entitled: Inhibitors of Protein Kinases (2012).
- Published
- 2013
21. Hierarchical phosphorylation of apical membrane antigen 1 is required for efficient red blood cell invasion by malaria parasites
- Author
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Steffen Erkelenz, Conrad Kunick, Isabelle S Lucet, Dorothee Heincke, Tim W. Gilberger, Christian Doerig, Klemens Engelberg, Tobias Spielmann, Laura Biller, Ulrike Ruch, Paul R. Gilson, Brendan S. Crabb, Boris Prinz, Katherine L. Harvey, and Louisa Wilcke
- Subjects
0301 basic medicine ,Erythrocytes ,Plasmodium falciparum ,030106 microbiology ,Protozoan Proteins ,Antigens, Protozoan ,Biology ,Second Messenger Systems ,Article ,03 medical and health sciences ,Protein Domains ,GSK-3 ,parasitic diseases ,Cyclic AMP ,Humans ,Malaria, Falciparum ,Phosphorylation ,Apical membrane antigen 1 ,Protein kinase A ,Multidisciplinary ,Kinase ,Membrane Proteins ,biology.organism_classification ,Cyclic AMP-Dependent Protein Kinases ,Cell biology ,030104 developmental biology ,Membrane protein ,Second messenger system - Abstract
Central to the pathogenesis of malaria is the proliferation of Plasmodium falciparum parasites within human erythrocytes. Parasites invade erythrocytes via a coordinated sequence of receptor-ligand interactions between the parasite and host cell. One key ligand, Apical Membrane Antigen 1 (AMA1), is a leading blood-stage vaccine and previous work indicates that phosphorylation of its cytoplasmic domain (CPD) is important to its function during invasion. Here we investigate the significance of each of the six available phospho-sites in the CPD. We confirm that the cyclic AMP/protein kinase A (PKA) signalling pathway elicits a phospho-priming step upon serine 610 (S610), which enables subsequent phosphorylation in vitro of a conserved, downstream threonine residue (T613) by glycogen synthase kinase 3 (GSK3). Both phosphorylation steps are required for AMA1 to function efficiently during invasion. This provides the first evidence that the functions of key invasion ligands of the malaria parasite are regulated by sequential phosphorylation steps.
- Published
- 2016
22. The kinomes of apicomplexan parasites
- Author
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Toni Gabaldón, Christian Doerig, Diego Miranda-Saavedra, Gordon Langsley, and Geoffrey J. Barton
- Subjects
biology ,Kinase ,animal diseases ,fungi ,Immunology ,Drug target ,Computational biology ,biology.organism_classification ,Microbiology ,Cell biology ,Apicomplexa ,Infectious Diseases ,parasitic diseases ,Kinome ,Protein phosphorylation ,Evolutionary information ,Protein Kinases - Abstract
Protein phosphorylation plays a fundamental role in the biology of apicomplexan parasites. Many apicomplexan protein kinases are substantially different from their mammalian orthologues, and thus constitute a landscape of potential drug targets. Here, we integrate genomic, biochemical, genetic and evolutionary information to provide an integrated and up-to-date analysis of twelve apicomplexan kinomes. All kinome sequences are available through the Kinomer database.
- Published
- 2012
23. Plasmodium falciparum Adhesins Play an Essential Role in Signalling and Activation of Invasion into Human Erythrocytes
- Author
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Megan J. Bird, Sash Lopaticki, Paul R. Gilson, Isabelle S Lucet, Greta E. Weiss, Brendan S. Crabb, Alan F. Cowman, Wai-Hong Tham, Dominique Dorin-Semblat, Christian Doerig, Nicholas T.Y. Lim, and Brendan R E Ansell
- Subjects
Erythrocytes ,Protein family ,QH301-705.5 ,Molecular Sequence Data ,Plasmodium falciparum ,Immunology ,Protozoan Proteins ,Microbiology ,Plasmodium ,03 medical and health sciences ,0302 clinical medicine ,Live cell imaging ,Virology ,parasitic diseases ,Genetics ,Humans ,Amino Acid Sequence ,Malaria, Falciparum ,Phosphorylation ,Biology (General) ,Receptor ,Molecular Biology ,030304 developmental biology ,0303 health sciences ,biology ,Merozoites ,Phosphotransferases ,RC581-607 ,biology.organism_classification ,3. Good health ,Cell biology ,Bacterial adhesin ,Membrane protein ,Cytoplasm ,Parasitology ,Immunologic diseases. Allergy ,030217 neurology & neurosurgery ,Research Article - Abstract
The most severe form of malaria in humans is caused by the protozoan parasite Plasmodium falciparum. The invasive form of malaria parasites is termed a merozoite and it employs an array of parasite proteins that bind to the host cell to mediate invasion. In Plasmodium falciparum, the erythrocyte binding-like (EBL) and reticulocyte binding-like (Rh) protein families are responsible for binding to specific erythrocyte receptors for invasion and mediating signalling events that initiate active entry of the malaria parasite. Here we have addressed the role of the cytoplasmic tails of these proteins in activating merozoite invasion after receptor engagement. We show that the cytoplasmic domains of these type 1 membrane proteins are phosphorylated in vitro. Depletion of PfCK2, a kinase implicated to phosphorylate these cytoplasmic tails, blocks P. falciparum invasion of red blood cells. We identify the crucial residues within the PfRh4 cytoplasmic domain that are required for successful parasite invasion. Live cell imaging of merozoites from these transgenic mutants show they attach but do not penetrate erythrocytes implying the PfRh4 cytoplasmic tail conveys signals important for the successful completion of the invasion process., Author Summary Malaria parasites must invade red blood cells to survive within the human host. Members of the erythrocyte binding-like (EBL) and reticulocyte binding-like (Rh) protein families, which are present at the apical tip of merozoites as single-pass transmembrane proteins, mediate recognition of red blood cells. Although extracellular domains of Plasmodium adhesins are required for binding red blood receptors, only the cytoplasmic region is in contact with the parasite’s cellular machinery to initiate invasion. Therefore any signal that is initiated upon binding must be communicated via the cytoplasmic domain to other targets within the malaria parasites. We investigate the role of adhesin phosphorylation in the P. falciparum invasion process. We show that the majority of adhesin cytoplasmic tails are phosphorylated in vitro. Mutational analyses provide identification of the important residues required for phosphorylation and suggest that PfCK2 may be responsible. Using a conditional knockdown line, we show that PfCK2 is essential for parasite growth and invasion. Using transgenic lines, we show that mutation of the PfRh4 cytoplasmic tail results in defects in parasite invasion. This work describes the critical residues important for signaling events and implicates PfCK2 as the essential kinase involved in P. falciparum invasion.
- Published
- 2015
24. Two nucleus-localized CDK-like kinases with crucial roles for malaria parasite erythrocytic replication are involved in phosphorylation of splicing factor
- Author
-
Selina Kern, Stefan Baumeister, Jude M. Przyborski, Jean Halbert, Thomas Dandekar, Gabriele Pradel, Shruti Agarwal, and Christian Doerig
- Subjects
Erythrocytes ,RNA Splicing ,Plasmodium falciparum ,Protein Serine-Threonine Kinases ,Biochemistry ,MAP2K7 ,Mice ,SR protein ,Cyclin-dependent kinase ,Catalytic Domain ,Animals ,Humans ,Kinome ,Phosphorylation ,Protein kinase A ,Molecular Biology ,MAPK14 ,Cell Nucleus ,biology ,Kinase ,Cell Biology ,Protein-Tyrosine Kinases ,Malaria ,Cell biology ,RNA splicing ,biology.protein - Abstract
The kinome of the human malaria parasite Plasmodium falciparum comprises representatives of most eukaryotic protein kinase groups, including kinases which regulate proliferation and differentiation processes. Despite extensive research on most plasmodial enzymes, little information is available regarding the four identified members of the cyclin-dependent kinase-like kinase (CLK) family. In other eukaryotes, CLKs regulate mRNA splicing through phosphorylation of Serine/Arginine-rich proteins. Here, we investigate two of the PfCLKs, the Lammer kinase homolog PfCLK-1, and PfCLK-2. Both PfCLKs show homology with the yeast Serine/Arginine protein kinase Sky1p and are transcribed throughout the asexual blood stages and in gametocytes. PfCLK-1/Lammer possesses two nuclear localization signal sites and PfCLK-2 possesses one of these signal sites upstream of the C-terminal catalytic domains. Indirect immunofluorescence, Western blot, and electron microscopy data confirm that the kinases are primarily localized in the parasite nucleus, and PfCLK-2 is further present in the cytoplasm. The two kinases are important for completion of the asexual replication cycle of P. falciparum, as demonstrated by reverse genetics approaches. In vitro kinase assays show substrate phosphorylation by the PfCLKs, including the Sky1p substrate, splicing factor Npl3p, and the plasmodial alternative splicing factor PfASF-1. Mass spectrometric analysis of co-immunoprecipitated proteins indicates assembly of the two PfCLKs with proteins with predicted nuclease, phosphatase, or helicase functions. Our data indicate a crucial role of PfCLKs for malaria blood stage parasites, presumably by participating in gene regulation through the post-transcriptional modification of mRNA.
- Published
- 2011
25. Activation of a PAK-MEK signalling pathway in malaria parasite-infected erythrocytes
- Author
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Jean-Phillipe Semblat, Julie Ann Spicer, Silke Retzlaff, Dominique Dorin-Semblat, Andrew P. Waters, Audrey Sicard, Christian Doerig, Marc Moniatte, Romain Hamelin, Caroline Doerig, Anubhav Srivastava, and Volker Heussler
- Subjects
0303 health sciences ,biology ,Immunology ,Plasmodium falciparum ,biology.organism_classification ,medicine.disease ,Microbiology ,Plasmodium ,3. Good health ,Cell biology ,Schizogony ,03 medical and health sciences ,0302 clinical medicine ,PAK1 ,030220 oncology & carcinogenesis ,Virology ,parasitic diseases ,medicine ,Kinome ,Plasmodium berghei ,p21-activated kinases ,Malaria ,030304 developmental biology - Abstract
Merozoites of malaria parasites invade red blood cells (RBCs), where they multiply by schizogony, undergoing development through ring, trophozoite and schizont stages that are responsible for malaria pathogenesis. Here, we report that a protein kinase-mediated signalling pathway involving host RBC PAK1 and MEK1, which do not have orthologues in the Plasmodium kinome, is selectively stimulated in Plasmodium falciparum-infected (versus uninfected) RBCs, as determined by the use of phospho-specific antibodies directed against the activated forms of these enzymes. Pharmacological interference with host MEK and PAK function using highly specific allosteric inhibitors in their known cellular IC50 ranges results in parasite death. Furthermore, MEK inhibitors have parasiticidal effects in vitro on hepatocyte and erythrocyte stages of the rodent malaria parasite Plasmodium berghei, indicating conservation of this subversive strategy in malaria parasites. These findings have profound implications for the development of novel strategies for antimalarial chemotherapy.
- Published
- 2011
26. An essential Aurora-related kinase transiently associates with spindle pole bodies during Plasmodium falciparum erythrocytic schizogony
- Author
-
Luc Reininger, Hélène Bourgade, Jonathan M. Wilkes, Diego Miranda-Saavedra, and Christian Doerig
- Subjects
Genetics ,0303 health sciences ,Protein-Serine-Threonine Kinases ,biology ,Kinase ,030302 biochemistry & molecular biology ,Plasmodium falciparum ,Cell cycle ,biology.organism_classification ,Microbiology ,Spindle pole body ,3. Good health ,Cell biology ,Conserved sequence ,Schizogony ,03 medical and health sciences ,parasitic diseases ,Kinome ,Molecular Biology ,030304 developmental biology - Abstract
Aurora kinases compose a family of conserved Ser/Thr protein kinases playing essential roles in eukaryotic cell division. To date, Aurora homologues remain uncharacterized in the protozoan phylum Apicomplexa. In malaria parasites, the characterization of Aurora kinases may help understand the cell cycle control during erythrocytic schizogony where asynchronous nuclear divisions occur. In this study, we revisited the kinome of Plasmodium falciparum and identified three Aurora-related kinases, Pfark-1, -2, -3. Among these, Pfark-1 is highly conserved in malaria parasites and also appears to be conserved across Apicomplexa. By tagging the endogenous Pfark-1 gene with the green fluorescent protein (GFP) in live parasites, we show that the Pfark-1-GFP protein forms paired dots associated with only a subset of nuclei within individual schizonts. Immunofluorescence analysis using an anti-α-tubulin antibody strongly suggests a recruitment of Pfark-1 at duplicated spindle pole bodies at the entry of the M phase of the cell cycle. Unsuccessful attempts at disrupting the Pfark-1 gene with a knockout construct further indicate that Pfark-1 is required for parasite growth in red blood cells. Our study provides new insights into the cell cycle control of malaria parasites and reports the importance of Aurora kinases as potential targets for new antimalarials.
- Published
- 2010
27. The Plasmodium eukaryotic initiation factor-2α kinase IK2 controls the latency of sporozoites in the mosquito salivary glands
- Author
-
William J. Sullivan, Robert Ménard, David S. Roos, Victor Nussenzweig, Ramanavelan Sakthivel, Min Zhang, Ruth S. Nussenzweig, Elizabeth A. Winzeler, Renu Tuteja, Beatriz M. A. Fontoura, Christian Doerig, Anat Caspi, Stephan Meister, Pascale Gueirard, Clare Fennell, and Lisa C. Ranford-Cartwright
- Subjects
Plasmodium berghei ,Immunology ,Phosphatase ,Protozoan Proteins ,Cytoplasmic Granules ,Plasmodium ,Salivary Glands ,Cell Line ,Mice ,eIF-2 Kinase ,03 medical and health sciences ,Eukaryotic initiation factor ,Phosphoprotein Phosphatases ,medicine ,Protein biosynthesis ,Animals ,Immunology and Allergy ,RNA, Messenger ,Phosphorylation ,030304 developmental biology ,Infectivity ,Life Cycle Stages ,0303 health sciences ,EIF-2 kinase ,Salivary gland ,biology ,030306 microbiology ,biology.organism_classification ,3. Good health ,Cell biology ,Mice, Inbred C57BL ,Culicidae ,Phenotype ,medicine.anatomical_structure ,Gene Expression Regulation ,Liver ,Sporozoites ,Protein Biosynthesis ,Gene Targeting ,biology.protein - Abstract
Sporozoites, the invasive form of malaria parasites transmitted by mosquitoes, are quiescent while in the insect salivary glands. Sporozoites only differentiate inside of the hepatocytes of the mammalian host. We show that sporozoite latency is an active process controlled by a eukaryotic initiation factor-2alpha (eIF2alpha) kinase (IK2) and a phosphatase. IK2 activity is dominant in salivary gland sporozoites, leading to an inhibition of translation and accumulation of stalled mRNAs into granules. When sporozoites are injected into the mammalian host, an eIF2alpha phosphatase removes the PO4 from eIF2alpha-P, and the repression of translation is alleviated to permit their transformation into liver stages. In IK2 knockout sporozoites, eIF2alpha is not phosphorylated and the parasites transform prematurely into liver stages and lose their infectivity. Thus, to complete their life cycle, Plasmodium sporozoites exploit the mechanism that regulates stress responses in eukaryotic cells.
- Published
- 2010
28. An Essential Role for the Plasmodium Nek-2 Nima-related Protein Kinase in the Sexual Development of Malaria Parasites
- Author
-
Lisa C. Ranford-Cartwright, Clare Fennell, Zoe Holland, J.P. Dean Goldring, Luc Reininger, Rita Tewari, Christian Doerig, and Oliver Billker
- Subjects
DNA Replication ,Erythrocytes ,Plasmodium berghei ,Recombinant Fusion Proteins ,Green Fluorescent Proteins ,Molecular Sequence Data ,Plasmodium falciparum ,Protozoan Proteins ,Cell Cycle Proteins ,Context (language use) ,Protein Serine-Threonine Kinases ,Biochemistry ,Plasmodium ,Animals, Genetically Modified ,03 medical and health sciences ,Molecular Basis of Cell and Developmental Biology ,parasitic diseases ,medicine ,Gametocyte ,Animals ,Humans ,Parasites ,Amino Acid Sequence ,RNA, Messenger ,Malaria, Falciparum ,Molecular Biology ,030304 developmental biology ,Genetics ,Life Cycle Stages ,0303 health sciences ,biology ,Gene Expression Profiling ,Sexual Development ,030302 biochemistry & molecular biology ,Gene targeting ,Cell Biology ,biology.organism_classification ,medicine.disease ,3. Good health ,Meiosis ,Culicidae ,NIMA-Related Kinase 1 ,Phenotype ,Vector (epidemiology) ,Gene Targeting ,Sequence Alignment ,Malaria - Abstract
The molecular control of cell division and development in malaria parasites is far from understood. We previously showed that a Plasmodium gametocyte-specific NIMA-related protein kinase, nek-4, is required for completion of meiosis in the ookinete, the motile form that develops from the zygote in the mosquito vector. Here, we show that another NIMA-related kinase, Pfnek-2, is also predominantly expressed in gametocytes, and that Pfnek-2 is an active enzyme displaying an in vitro substrate preference distinct from that of Pfnek-4. A functional nek-2 gene is required for transmission of both Plasmodium falciparum and the rodent malaria parasite Plasmodium berghei to the mosquito vector, which is explained by the observation that disruption of the nek-2 gene in P. berghei causes dysregulation of DNA replication during meiosis and blocks ookinete development. This has implications (i) in our understanding of sexual development of malaria parasites and (ii) in the context of control strategies aimed at interfering with malaria transmission.
- Published
- 2009
29. Disruption of the Pf PK7 Gene Impairs Schizogony and Sporogony in the Human Malaria Parasite Plasmodium falciparum
- Author
-
Dominique Dorin-Semblat, Caroline Doerig, Audrey Sicard, Lisa C. Ranford-Cartwright, and Christian Doerig
- Subjects
Erythrocytes ,Blotting, Western ,Plasmodium falciparum ,Protozoan Proteins ,Mitogen-activated protein kinase kinase ,Microbiology ,Schizogony ,parasitic diseases ,Animals ,Humans ,Malaria, Falciparum ,Protein kinase A ,Molecular Biology ,Gene ,Mitogen-Activated Protein Kinase Kinases ,Fungal protein ,biology ,Kinase ,Articles ,General Medicine ,Spores, Fungal ,biology.organism_classification ,Reverse genetics ,Cell biology ,Blotting, Southern - Abstract
PfPK7 is an orphan protein kinase of Plasmodium falciparum with maximal homology to MEK3/6 and to fungal protein kinase A proteins in its C-terminal and N-terminal regions, respectively. We showed previously that recombinant PfPK7 is active on various substrates but is unable to phosphorylate the Plasmodium falciparum mitogen-activated protein kinase homologues, suggesting that it is not a MEK functional homologue. Using a reverse genetics approach to investigate the function of this enzyme in live parasites, we now show that Pf PK7 − parasite clones display phenotypes at two stages of their life cycle: first, a decrease in the rate of asexual growth in erythrocytes associated with a lower number of daughter merozoites generated per schizont, and second, a dramatic reduction in the ability to produce oocysts in the mosquito vector. A normal asexual growth rate and the ability to produce oocysts are restored if a functional copy of the Pf PK7 gene is reintroduced into the Pf PK7 − parasites. Hence, PfPK7 is involved in a pathway that regulates parasite proliferation and development.
- Published
- 2008
30. Phosphoproteomics reveals malaria parasite Protein Kinase G as a signalling hub regulating egress and invasion
- Author
-
Chetan E. Chitnis, Christine S. Hopp, Kate D. Lee, Andrew B. Tobin, Faiza Amber Siddiqui, Lev Solyakov, David A. Baker, Anthony A. Holder, Maria Viskaduraki, Mahmood M. Alam, Robert W. Moon, Andrew R. Bottrill, Christian Flueck, Shailja Singh, Sharad Mistry, Judith L. Green, and Christian Doerig
- Subjects
Proteomics ,Erythrocytes ,Plasmodium falciparum ,Schizonts ,Protozoan Proteins ,General Physics and Astronomy ,Biology ,General Biochemistry, Genetics and Molecular Biology ,Article ,Gene Expression Regulation, Enzymologic ,03 medical and health sciences ,Cyclic GMP-Dependent Protein Kinases ,Calcium Signaling ,Protein kinase A ,030304 developmental biology ,Calcium signaling ,Regulation of gene expression ,0303 health sciences ,Multidisciplinary ,Kinase ,030302 biochemistry & molecular biology ,Phosphoproteomics ,General Chemistry ,Phosphoproteins ,3. Good health ,Transport protein ,Cell biology ,Phosphorylation - Abstract
Our understanding of the key phosphorylation-dependent signalling pathways in the human malaria parasite, Plasmodium falciparum, remains rudimentary. Here we address this issue for the essential cGMP-dependent protein kinase, PfPKG. By employing chemical and genetic tools in combination with quantitative global phosphoproteomics, we identify the phosphorylation sites on 69 proteins that are direct or indirect cellular targets for PfPKG. These PfPKG targets include proteins involved in cell signalling, proteolysis, gene regulation, protein export and ion and protein transport, indicating that cGMP/PfPKG acts as a signalling hub that plays a central role in a number of core parasite processes. We also show that PfPKG activity is required for parasite invasion. This correlates with the finding that the calcium-dependent protein kinase, PfCDPK1, is phosphorylated by PfPKG, as are components of the actomyosin complex, providing mechanistic insight into the essential role of PfPKG in parasite egress and invasion., Protein kinases expressed by the malaria parasite Plasmodium falciparum represent potentially valuable drug targets. Alam et al. identify proteins whose phosphorylation is dependent on the kinase PfPKG, revealing a regulatory network controlling parasite egress from red blood cells and calcium signalling.
- Published
- 2015
31. The kinomics of malaria
- Author
-
Christian Doerig, Oliver Billker, Mathieu Brochet, and Andrew B. Tobin
- Subjects
Kinase ,biology ,Drug discovery ,Phosphoproteomics ,Transfection ,Signalling ,biology.organism_classification ,Genome ,Plasmodium ,Cell biology ,Malaria ,Phosphorylation ,Protein phosphorylation ,Kinome - Abstract
Reversible phosphorylation regulates many aspects of protein function and properties, such as proper folding, localization, binding potential, enzymatic activity, or stability. This chapter focuses on the Plasmodium kinome and on the biology of protein phosphorylation in Plasmodium. It discusses the potential and initial progress in antimalarial drug discovery based on the inhibition of the protein kinases of both the parasite and its host erythrocyte. Methods to manipulate the Plasmodium genome have been developed only relatively recently. The most commonly used methods rely on the transfection of asexual erythrocytic stages of the life cycle, in which the parasite is haploid and replicates continuously, facilitating genetic manipulation and selection of recombinants. The rapid expansion of mass spectrometry‐based proteomic techniques has provided a method of producing a snapshot of the global phosphorylation status of organisms such as yeast and bacteria, as well as cultured eukaryotic cells, and tissues such as the liver.
- Published
- 2015
32. Malaria Parasite-Infected Erythrocytes Secrete PfCK1, the Plasmodium Homologue of the Pleiotropic Protein Kinase Casein Kinase 1
- Author
-
Christian Doerig, Claudia Demarta-Gatsi, Marc Moniatte, Dominique Dorin-Semblat, Florence Armand, Teresa Carvalho, and Romain Hamelin
- Subjects
Erythrocytes ,Blotting, Western ,Plasmodium falciparum ,Protozoan Proteins ,Fluorescent Antibody Technique ,lcsh:Medicine ,MAP3K7 ,MAP2K7 ,Casein Kinase I ,Humans ,Immunoprecipitation ,ASK1 ,Cloning, Molecular ,Phosphorylation ,lcsh:Science ,Multidisciplinary ,biology ,Cyclin-dependent kinase 4 ,Cyclin-dependent kinase 2 ,lcsh:R ,Cyclin-dependent kinase 3 ,Cell biology ,Malaria ,Blotting, Southern ,biology.protein ,lcsh:Q ,Casein kinase 2 ,Research Article - Abstract
Casein kinase 1 (CK1) is a pleiotropic protein kinase implicated in several fundamental processes of eukaryotic cell biology. Plasmodium falciparum encodes a single CK1 isoform, PfCK1, that is expressed at all stages of the parasite's life cycle. We have previously shown that the pfck1 gene cannot be disrupted, but that the locus can be modified if no loss-of-function is incurred, suggesting an important role for this kinase in intra-erythrocytic asexual proliferation. Here, we report on the use of parasite lines expressing GFP- or His-tagged PfCK1 from the endogenous locus to investigate (i) the dynamics of PfCK1 localisation during the asexual cycle in red blood cells, and (ii) potential interactors of PfCK1, so as to gain insight into the involvement of the enzyme in specific cellular processes. Immunofluorescence analysis reveals a dynamic localisation of PfCK1, with evidence for a pool of the enzyme being directed to the membrane of the host erythrocyte in the early stages of infection, followed by a predominantly intra-parasite localisation in trophozoites and schizonts and association with micronemes in merozoites. Furthermore, we present strong evidence that a pool of enzymatically active PfCK1 is secreted into the culture supernatant, demonstrating that PfCK1 is an ectokinase. Our interactome experiments and ensuing kinase assays using recombinant PfCK1 to phosphorylate putative interactors in vitro suggest an involvement of PfCK1 in many cellular processes such as mRNA splicing, protein trafficking, ribosomal, and host cell invasion.
- Published
- 2015
33. A novel protein kinase family inPlasmodium falciparumis differentially transcribed and secreted to various cellular compartments of the host cell
- Author
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J.P. Dean Goldring, Marta C. Nunes, Artur Scherf, and Christian Doerig
- Subjects
Regulation of gene expression ,Kinase ,Immunoprecipitation ,Plasmodium falciparum ,Biology ,biology.organism_classification ,Microbiology ,Molecular biology ,Cell biology ,Cytoplasm ,parasitic diseases ,Antigenic variation ,Protein kinase A ,Molecular Biology ,Gene - Abstract
Processes at the surface of Plasmodium falciparum-infected erythrocytes such as antigenic variation and cytoadhesion may be modulated by active signalling between host and parasite. Potential candidates for this role include the putative kinases of the FIKK family. The novel Apicomplexa-specific FIKK gene has expanded in P. falciparum to 20 sequence-related members distributed between 11 chromosomes. Specific antibodies raised against different members indicated that most FIKK proteins locate to punctate foci in the erythrocyte cytoplasm that colocalized with Maurer's clefts proteins. One FIKK member dissociates at the trophozoite stage from the Maurer's clefts and relocates with the erythrocyte cytoskeleton. Another FIKK protein, despite having a PEXEL motif, remains located within the parasite. FIKK proteins possess the essential residues for phosphotransferase activity. We show that protein kinase activity was detected in immunoprecipitates obtained with two anti-FIKK antibodies. Quantitative PCR analysis revealed differential gene transcription of the FIKK paralogues in asexual blood stages parasites. We observed significant changes in the transcription pattern between parasites with different adhesion phenotypes. Our data suggest a role of FIKK proteins in the remodelling of the erythrocyte surface and reveal the existence of an adaptable parasite system able to sense intra- and possibly extracellular changes.
- Published
- 2006
34. Pbcrk-1, the Plasmodium berghei orthologue of P. falciparum cdc-2 related kinase-1 (Pfcrk-1), is essential for completion of the intraerythrocytic asexual cycle
- Author
-
Amy K. Bei, Ali A. Sultan, Marie Paule Nivez, Christian Doerig, Marylin Madamet, Natohya Henry, Daniel Parzy, and Radha Rangarajan
- Subjects
Erythrocytes ,Plasmodium berghei ,Molecular Sequence Data ,Immunology ,Locus (genetics) ,Gene product ,Reproduction, Asexual ,parasitic diseases ,CDC2-CDC28 Kinases ,Gametocyte ,Animals ,Amino Acid Sequence ,Gene ,Genetics ,biology ,Kinase ,Plasmodium falciparum ,General Medicine ,Blotting, Northern ,biology.organism_classification ,Reverse genetics ,Rats ,Cell biology ,Infectious Diseases ,Parasitology ,Sequence Alignment ,Gene Deletion ,RNA, Protozoan - Abstract
The molecular mechanisms underlying gametocytogenesis in malaria parasites are not understood. Plasmodium falciparum cdc2-related kinase 1 (pfcrk-1), a gene that is expressed predominantly in gametocytes, bears homology to the PITSLRE subfamily of cyclin-dependent kinases and has been hypothesized to function as a negative regulator of the cell cycle. We attempted to knock-out pbcrk-1, the P. berghei orthologue of pfcrk-1, but were unable to recover P. berghei parasites with a disrupted pbcrk-1 locus. In contrast, an integration event at this locus that did not result in a loss-of-function of the pbcrk-1 gene was readily observed. This strongly suggests that a functional pbcrk-1 gene product is essential to intraerythrocytic asexual multiplication.
- Published
- 2006
35. An atypical mitogen-activated protein kinase controls cytokinesis and flagellar motility during male gamete formation in a malaria parasite
- Author
-
Christian Doerig, Dominique Dorin, Oliver Billker, Rita Tewari, and Robert W. Moon
- Subjects
Genetics ,Cell cycle checkpoint ,Sexual transmission ,Cellular differentiation ,Biology ,biology.organism_classification ,Microbiology ,Cell biology ,Sexual reproduction ,parasitic diseases ,Gametocyte ,Plasmodium berghei ,Molecular Biology ,Mitosis ,Cytokinesis - Abstract
The transmission of malaria parasites to the mosquito depends critically on the rapid initiation of sexual reproduction in response to triggers from the mosquito midgut environment. We here identify an essential function for an atypical mitogen-activated protein kinase of the rodent malaria parasite Plasmodium berghei, Pbmap-2, in male sexual differentiation and parasite transmission to the mosquito. A deletion mutant no longer expressing the Pbmap-2 protein develops as wild type throughout the asexual erythrocytic phase of the life cycle. Gametocytes, the sexual transmission stages, form normally and respond in vitro to the appropriate environmental cues by rounding up and emerging from their host cells. However, microgametocytes fail to release flagellated microgametes. Female development is not affected, as judged by the ability of macrogametes to become cross-fertilized by microgametes from a donor strain. Cellular differentiation of Pbmap-2 KO microgametocytes is blocked at a late stage of male gamete formation, after replication and mitoses have been completed and axonemes have been assembled. These data demonstrate a function for Pbmap-2 in initiating cytokinesis and axoneme motility, possibly downstream of a cell cycle checkpoint for the completion of replication and/or mitosis, which are extraordinarily rapid in the male gametocyte.
- Published
- 2005
36. A mitogen‐activated protein kinase regulates male gametogenesis and transmission of the malaria parasite Plasmodium berghei
- Author
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Radha Rangarajan, Priscilla Maldonado, Ali A. Sultan, Dominique Dorin, Christian Doerig, Amy K. Bei, and Deepa Jethwaney
- Subjects
Male ,MAPK/ERK pathway ,MAP Kinase Signaling System ,Plasmodium berghei ,Scientific Report ,Biochemistry ,Plasmodium ,Gametogenesis ,Host-Parasite Interactions ,Mice ,Anopheles ,parasitic diseases ,Genetics ,medicine ,Gametocyte ,Animals ,Cloning, Molecular ,Molecular Biology ,Mitogen-Activated Protein Kinase 1 ,biology ,Plasmodium falciparum ,biology.organism_classification ,medicine.disease ,Insect Vectors ,Malaria ,Cell biology ,Flagella ,Female - Abstract
Differentiation of malaria parasites into sexual forms (gametocytes) in the vertebrate host and their subsequent development into gametes in the mosquito vector are crucial steps in the completion of the parasite's life cycle and transmission of the disease. The molecular mechanisms that regulate the sexual cycle are poorly understood. Although several signal transduction pathways have been implicated, a clear understanding of the pathways involved has yet to emerge. Here, we show that a Plasmodium berghei homologue of Plasmodium falciparum mitogen-activated kinase-2 (Pfmap-2), a gametocyte-specific mitogen-activated protein kinase (MAPK), is required for male gamete formation. Parasites lacking Pbmap-2 are competent for gametocytogenesis, but exflagellation of male gametocytes, the process that leads to male gamete formation, is almost entirely abolished in mutant parasites. Consistent with this result, transmission of mutant parasites to mosquitoes is grossly impaired. This finding identifies a crucial role for a MAPK pathway in malaria transmission.
- Published
- 2005
37. Malaria protein kinase CK2 (PfCK2) shows novel mechanisms of regulation
- Author
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Andrew B. Tobin, Mahmood M. Alam, Christian Doerig, Paul M. Cullis, Lev Solyakov, Ralf Schmid, Glenn A. Burley, Andrew R. Bottrill, and Michele Graciotti
- Subjects
Models, Molecular ,Proteomics ,Protozoan Proteins ,lcsh:Medicine ,Anthraquinones ,Mitogen-activated protein kinase kinase ,Biochemistry ,MAP2K7 ,Adenosine Triphosphate ,Cell Signaling ,Molecular Cell Biology ,Medicine and Health Sciences ,QD ,ASK1 ,Phosphorylation ,lcsh:Science ,Casein Kinase II ,Protozoans ,Multidisciplinary ,Protein Kinase Signaling Cascade ,Malarial Parasites ,Signaling Cascades ,Infectious Diseases ,Casein kinase 2 ,Research Article ,Signal Transduction ,Drug Research and Development ,Molecular Sequence Data ,Plasmodium falciparum ,Biology ,Microbiology ,RS ,Parasitic Diseases ,Humans ,Amino Acid Sequence ,Kinase activity ,Pharmacology ,Binding Sites ,MAP kinase kinase kinase ,lcsh:R ,Organisms ,Computational Biology ,Biology and Life Sciences ,Dual-specificity kinase ,Cell Biology ,Parasitic Protozoans ,Protein Structure, Tertiary ,Malaria ,lcsh:Q ,Parasitology ,Cyclin-dependent kinase 9 - Abstract
Casein kinase 2 (protein kinase CK2) is a conserved eukaryotic serine/theronine kinase with multiple substrates and roles in the regulation of cellular processes such as cellular stress, cell proliferation and apoptosis. Here we report a detailed analysis of the Plasmodium falciparum CK2, PfCK2, demonstrating that this kinase, like the mammalian orthologue, is a dual specificity kinase able to phosphorylate at both serine and tyrosine. However, unlike the human orthologue that is auto-phosphorylated on tyrosine within the activation loop, PfCK2 shows no activation loop auto-phosphorylation but rather is auto-phosphorylated at threonine 63 within subdomain I. Phosphorylation at this site in PfCK2 is shown here to regulate the intrinsic kinase activity of PfCK2. Furthermore, we generate an homology model of PfCK2 in complex with the known selective protein kinase CK2 inhibitor, quinalizarin, and in so doing identify key co-ordinating residues in the ATP binding pocket that could aid in designing selective inhibitors to PfCK2.
- Published
- 2014
38. Inhibition of the SR Protein-Phosphorylating CLK Kinases of Plasmodium falciparum Impairs Blood Stage Replication and Malaria Transmission
- Author
-
Gabriele Pradel, Mahmood M. Alam, Rainer Fischer, Liliane Onambele Abodo, Thomas Brügl, Thomas Dandekar, Benjamin Strödke, Christine C. Wirth, Selina Kern, Franz Bracher, Shruti Agarwal, André P. Gehring, Andrew B. Tobin, Kilian Huber, Christian Doerig, and Publica
- Subjects
Genes, Protozoan ,Protozoan Proteins ,lcsh:Medicine ,Gene Expression ,Protozoology ,Serine ,Cell Signaling ,Molecular Cell Biology ,Medicine and Health Sciences ,Malaria, Falciparum ,Phosphorylation ,lcsh:Science ,Protozoans ,Multidisciplinary ,Protein Kinase Signaling Cascade ,Kinase ,Malarial Parasites ,Gene Expression Regulation, Developmental ,Protein-Tyrosine Kinases ,Signaling Cascades ,Recombinant Proteins ,Cell biology ,Infectious Diseases ,Medical Microbiology ,Research Article ,Signal Transduction ,Saccharomyces cerevisiae Proteins ,Plasmodium falciparum ,Biology ,Protein Serine-Threonine Kinases ,Microbiology ,Antimalarials ,SR protein ,ddc:570 ,parasitic diseases ,Gametocyte ,Genetics ,Parasitic Diseases ,Animals ,Humans ,Microbial Pathogens ,Protein Kinase Inhibitors ,Protein-Serine-Threonine Kinases ,lcsh:R ,Organisms ,Biology and Life Sciences ,Cell Biology ,biology.organism_classification ,Tropical Diseases ,Parasitic Protozoans ,Malaria ,Cytoplasm ,Structural Homology, Protein ,Immunology ,lcsh:Q ,Parasitology - Abstract
Cyclin-dependent kinase-like kinases (CLKs) are dual specificity protein kinases that phosphorylate Serine/Arginine-rich (SR) proteins involved in pre-mRNA processing. Four CLKs, termed PfCLK-1-4, can be identified in the human malaria parasite Plasmodium falciparum, which show homology with the yeast SR protein kinase Sky1p. The four PfCLKs are present in the nucleus and cytoplasm of the asexual blood stages and of gametocytes, sexual precursor cells crucial for malaria parasite transmission from humans to mosquitoes. We identified three plasmodial SR proteins, PfSRSF12, PfSFRS4 and PfSF-1, which are predominantly present in the nucleus of blood stage trophozoites, PfSRSF12 and PfSF-1 are further detectable in the nucleus of gametocytes. We found that recombinantly expressed SR proteins comprising the Arginine/Serine (RS)-rich domains were phosphorylated by the four PfCLKs in in vitro kinase assays, while a recombinant PfSF-1 peptide lacking the RS-rich domain was not phosphorylated. Since it was hitherto not possible to knock-out the pfclk genes by conventional gene disruption, we aimed at chemical knock-outs for phenotype analysis. We identified five human CLK inhibitors, belonging to the oxo-beta-carbolines and aminopyrimidines, as well as the antiseptic chlorhexidine as PfCLK-targeting compounds. The six inhibitors block P. falciparum blood stage replication in the low micromolar to nanomolar range by preventing the trophozoite-to-schizont transformation. In addition, the inhibitors impair gametocyte maturation and gametogenesis in in vitro assays. The combined data show that the four PfCLKs are involved in phosphorylation of SR proteins with essential functions for the blood and sexual stages of the malaria parasite, thus pointing to the kinases as promising targets for antimalarial and transmission blocking drugs.
- Published
- 2014
39. Influence of Human p16INK4 and p21CIP1 on the in Vitro Activity of Recombinant Plasmodium falciparum Cyclin-Dependent Protein Kinases
- Author
-
Jeanne A. Geyer, James Koh, Sean T. Prigge, Zhiyu Li, Cassandra L. Woodard, Karine G. Le Roch, Christian Doerig, and Norman C. Waters
- Subjects
Cyclin-Dependent Kinase Inhibitor p21 ,Cyclin D ,Plasmodium falciparum ,Cyclin A ,Protozoan Proteins ,Biophysics ,Protein Serine-Threonine Kinases ,Biology ,Binding, Competitive ,Biochemistry ,Cyclin-dependent kinase ,Cyclins ,Animals ,Humans ,Molecular Biology ,Cyclin-Dependent Kinase Inhibitor p16 ,Cyclin binding ,Cyclin-dependent kinase 1 ,Dose-Response Relationship, Drug ,Cyclin-dependent kinase 2 ,Cell Biology ,Cyclin-Dependent Kinases ,Recombinant Proteins ,Cell biology ,enzymes and coenzymes (carbohydrates) ,embryonic structures ,biology.protein ,Cyclin-dependent kinase complex ,Mitogen-Activated Protein Kinases ,biological phenomena, cell phenomena, and immunity ,Cyclin-Dependent Kinase-Activating Kinase ,Cyclin A2 - Abstract
The regulatory mechanisms of most cyclin dependent protein kinases (CDKs) are well understood and are highly conserved in eukaryotes. CDKs from the malaria parasite, Plasmodium falciparum, appear to be regulated in a similar manner with regard to cyclin binding and phosphorylation. In order to further understand their regulatory mechanisms, we examined two classes of cyclin dependent kinase inhibitors (CDIs) to inhibit a panel of plasmodial CDKs. We find that Pfmrk and PfPK5 are inhibited by heterologous p21(CIP1) with varying degrees of inhibition. In contrast, PfPK6, a kinase with sequence features characteristic of both a CDK and MAP kinase, is unaffected by this CDI. Furthermore, the CDK4/6 specific CDI, p16(INK4), fails to inhibit these plasmodial CDKs. Taken together, these results suggest that plasmodial CDKs may be regulated by the binding of inhibitory proteins in vivo.
- Published
- 2001
40. Parasite Protein Kinases: At Home and Abroad
- Author
-
Christian Doerig and Andrew B. Tobin
- Subjects
Plasmodium-Falciparum ,Cancer Research ,Kinase ,fungi ,Plasmodium falciparum ,Biology ,biology.organism_classification ,Microbiology ,Cell biology ,Immunology and Microbiology(all) ,Virology ,parasitic diseases ,Family ,Parasitology ,Parasite protein ,Molecular Biology - Abstract
Two studies identify protein kinases of parasitic protists with roles in either their own development or the control of the behavior of their host cell.
- Published
- 2010
41. A parasite calcium switch and Achilles' heel revealed
- Author
-
Christian Doerig and Oliver Billker
- Subjects
Heel ,Protein Conformation ,chemistry.chemical_element ,Biology ,Calcium ,Selective inhibition ,Protein structure ,Invasion ,Structural Biology ,parasitic diseases ,medicine ,Parasite hosting ,Dependent Protein-Kinase ,Protein kinase A ,Protein Kinase Inhibitors ,Molecular Biology ,Antiparasitic Agents ,Inhibitors ,Toxoplasma gondii ,biology.organism_classification ,Antiparasitic agent ,Cell biology ,medicine.anatomical_structure ,chemistry ,Protein Kinases ,Toxoplasma ,Apicomplexan Parasites - Abstract
Crystal structures of a calcium-dependent protein kinase from Toxoplasma gondii uncover a unique mechanism of activation and potential avenues for selective inhibition.
- Published
- 2010
42. Intracellular targets of cyclin-dependent kinase inhibitors: identification by affinity chromatography using immobilised inhibitors
- Author
-
Marie Knockaert, Laurent Meijer, Karen M. Grant, David Fergusson, M. Soete, Eve Damiens, K. Le Roch, Nathanael S. Gray, Jeremy C. Mottram, Peter G. Schultz, Christian Doerig, Young-Tae Chang, J.-F. Dubremetz, and Philippe Grellier
- Subjects
Swine ,Casein kinase 1 ,Molecular Sequence Data ,Clinical Biochemistry ,Cyclin B ,Purine analogue ,Biochemistry ,Chromatography, Affinity ,Substrate Specificity ,Starfish ,Xenopus laevis ,Cyclin-dependent kinase ,parasitic diseases ,Drug Discovery ,Animals ,Amino Acid Sequence ,Enzyme Inhibitors ,Protein kinase A ,Purine ,Molecular Biology ,Pharmacology ,Cyclin-dependent kinase 1 ,biology ,Kinase ,Cyclin-dependent kinase 2 ,Eukaryota ,General Medicine ,Cyclin-Dependent Kinases ,Malaria ,Rats ,Cell biology ,Erk ,Oocytes ,biology.protein ,Molecular Medicine - Abstract
BACKGROUND: Chemical inhibitors of cyclin-dependent kinases (CDKs) have great therapeutic potential against various proliferative and neurodegenerative disorders. Olomoucine, a 2,6,9-trisubstituted purine, has been optimized for activity against CDK1/cyclin B by combinatorial and medicinal chemistry efforts to yield the purvalanol inhibitors. Although many studies support the action of purvalanols against CDKs, the actual intracellular targets of 2,6, 9-trisubstituted purines remain unverified. RESULTS: To address this issue, purvalanol B (95. ) and an N6-methylated, CDK-inactive derivative (95M. ) were immobilized on an agarose matrix. Extracts from a diverse collection of cell types and organisms were screened for proteins binding purvalanol B. In addition to validating CDKs as intracellular targets, a variety of unexpected protein kinases were recovered from the 95. matrix. Casein kinase 1 (CK1) was identified as a principal 95. matrix binding protein in Plasmodium falciparum, Leishmania mexicana, Toxoplasma gondii and Trypanosoma cruzi. Purvalanol compounds also inhibit the proliferation of these parasites, suggesting that CK1 is a valuable target for further screening with 2,6,9-trisubstituted purine libraries. CONCLUSIONS: That a simple batchwise affinity chromatography approach using two purine derivatives facilitated isolation of a small set of highly purified kinases suggests that this could be a general method for identifying intracellular targets relevant to a particular class of ligands. This method allows a close correlation to be established between the pattern of proteins bound to a small family of related compounds and the pattern of cellular responses to these compounds.
- Published
- 2000
43. Activation of a Plasmodium falciparum cdc2-related Kinase by Heterologous p25 and Cyclin H
- Author
-
Norman C. Waters, Claude Sestier, Christian Doerig, Debopam Chakrabarti, Laurent Meijer, Barbara Kappes, Dominique Dorin, and Karine G. Le Roch
- Subjects
Cyclin H ,Cyclin-dependent kinase 1 ,biology ,Kinase ,Plasmodium falciparum ,Cell Biology ,biology.organism_classification ,Biochemistry ,Cell biology ,Cyclin-dependent kinase ,Cyclin-dependent kinase complex ,biology.protein ,Molecular Biology ,Screening procedures ,CDC2 Protein Kinase - Abstract
Several Plasmodium falciparum genes encoding cdc2-related protein kinases have been identified, but the modalities of their regulation remains largely unexplored. In the present study, we investigated the regulation in vitro of PfPK5, a putative homologue of Cdk1 (cdc2) in P. falciparum. We show that (i) PfPK5 is efficiently activated by heterologous (human) cyclin H and p25, a cyclin-like molecule that specifically activates human Cdk5; (ii) the activated enzyme can be inhibited by chemical Cdk inhibitors; (iii) Pfmrk, a putative P. falciparum homologue of the Cdk-activating kinase, does neither activate nor phosphorylate PfPK5; and (iv) PfPK5 is able to autophosphorylate in the presence of a cyclin. Taken together, these results suggest that the regulation of Plasmodium Cdks may differ in important aspects from that of their human counterparts. Furthermore, we cloned an open reading frame encoding a novel P. falciparum protein possessing maximal homology to cyclin H from various organisms, and we show that this protein, called Pfcyc-1, is able to activate recombinant PfPK5 in vitro with an efficiency similar to that of human cyclin H and p25. This work opens the way to the development of screening procedures aimed at identifying compounds that specifically target the parasite Cdks.
- Published
- 2000
44. An Atypical Mitogen-activated Protein Kinase (MAPK) Homologue Expressed in Gametocytes of the Human Malaria Parasite Plasmodium falciparum
- Author
-
Caroline Doerig, Dominique Dorin, Pietro Alano, Irène Boccaccio, Daniel Parzy, Liliane Ciceron, Christian Doerig, and Renan Sulpice
- Subjects
MAPK/ERK pathway ,biology ,Kinase ,Autophosphorylation ,Plasmodium falciparum ,Cell Biology ,biology.organism_classification ,Biochemistry ,law.invention ,Cell biology ,Open reading frame ,law ,Complementary DNA ,Recombinant DNA ,Kinase activity ,Molecular Biology - Abstract
The cDNA encoding Pfmap-2, an enzyme of the human malaria parasite Plasmodium falciparum, was cloned, sequenced, and expressed in Escherichia coli. The open reading frame carried by the Pfmap-2 cDNA encodes a 508-amino acid polypeptide of 59.2 kDa with maximal homology to mitogen-activated protein kinases (MAPKs) from various organisms. The purified recombinant enzyme displayed functional characteristics of MAPKs such as (i) ability to undergo autophosphorylation, (ii) ability to phosphorylate myelin basic protein, a classical MAPK substrate, (iii) regulation of kinase activity by a MAPK-specific phosphatase, and (iv) ability to be activated by component(s) present in cell extracts. Mutational analysis of the recombinant protein allowed the identification of residues that are important for enzymatic activity. Northern blot analysis and immunofluorescence assays indicated that Pfmap-2 is expressed specifically in gametocytes, the form that is responsible for transmission of the parasite to the mosquito vector. Gametocyte extracts activated recombinant Pfmap-2 more efficiently than extracts from asexual parasites, which is consistent with this stage specificity. Despite its overall high level of homology to MAPKs, Pfmap-2 presents the peculiarity of not possessing the conserved threonine-X-tyrosine activation motif usually found in enzymes of this family; instead, it has a threonine-serine-histidine at the same location. This atypical feature formed the basis for a detailed analysis of the primary structure of MAPKs, allowing us to define an operational MAPK signature, which is shared by Pfmap-2. The fact that no MAPK from vertebrates diverge in the activation motif suggests that the fine mechanisms of Pfmap-2 regulation may offer an opportunity for antimalarial drug targeting.
- Published
- 1999
45. A secreted Plasmodium falciparum kinase reveals a signature motif for classification of tyrosine kinase-like kinases
- Author
-
Abdirahman I. Abdi, Teresa Carvalho, Jonathan M. Wilkes, and Christian Doerig
- Subjects
Genetics ,Erythrocytes ,Protein family ,biology ,Kinase ,Cyclin-dependent kinase 2 ,Plasmodium falciparum ,Computational Biology ,Protein-Tyrosine Kinases ,biology.organism_classification ,Microbiology ,MAP2K7 ,Cell biology ,biology.protein ,Humans ,c-Raf ,Tyrosine ,Kinase activity - Abstract
Thorough bioinformatic and phylogenetic analyses of Plasmodium falciparum tyrosine kinase-like kinase (TKL) sequences revealed a clear evolutionary relationship of PF3D7_1121300 (thereafter called PfTKL2) to the IL-1 receptor-associated kinase (IRAK)/receptor-like kinase (RLK)/Pelle protein family. We identified a novel conserved motif that is unique to this family, as well as an insertion whose length allows distribution of its members into two distinct subfamilies, in a way that matches exactly the dichotomy between ‘Tube/Tube-like kinases’ (TTLKs) and ‘Pelle-like kinases’ (PLKs) distinguished previously on the basis of features in accessory domains. The PfTKL2 protein is expressed ubiquitously in asexual blood stages and in gametocytes, and the recombinant enzyme displays kinase activity in vitro. The protein is exported to the host erythrocyte; furthermore, in accordance with data from a previous study of the extracellular proteome of Plasmodium-infected erythrocytes, we show that PfTKL2 is secreted into the culture medium. Considering the functions of other members of the RLK/Pelle family in immunity, and its secretion to the extracellular medium, we speculate that PfTKL2 functions may include an immunomodulatory role promoting parasite survival in the human host.
- Published
- 2013
46. Global Analysis of Protein Expression and Phosphorylation of Three Stages of Plasmodium falciparum Intraerythrocytic Development
- Author
-
Brittany N. Pease, Steven P. Gygi, Debopam Chakrabarti, Mark P. Jedrychowski, Timothy Dillman, Natarajan Kannan, John W Harmon, Ratna Chakrabarti, Edward L. Huttlin, Christian Doerig, and Eric Talevich
- Subjects
Erythrocytes ,Proteome ,Molecular Sequence Data ,Plasmodium falciparum ,Protozoan Proteins ,Proteomics ,Biochemistry ,Article ,Cyclin-dependent kinase ,Humans ,Amino Acid Sequence ,Phosphorylation ,Cells, Cultured ,biology ,Staining and Labeling ,Kinase ,Phosphoproteomics ,General Chemistry ,Phosphoproteins ,Cell biology ,Protein kinase domain ,biology.protein ,Protein Kinases ,Protein Processing, Post-Translational ,Cytokinesis ,Signal Transduction - Abstract
During asexual intraerythrocytic development, Plasmodium falciparum diverges from the paradigm of the eukaryotic cell cycles by undergoing multiple rounds of DNA replication and nuclear division without cytokinesis. A better understanding of the molecular switches that coordinate a myriad of events for the progression of the parasite through the intraerythrocytic developmental stages will be of fundamental importance for rational design of intervention strategies. To achieve this goal, we performed isobaric tag-based quantitative proteomics and phosphoproteomics analyses of three developmental stages in the Plasmodium asexual cycle and identified 2767 proteins, 1337 phosphoproteins, and 6293 phosphorylation sites. Approximately 34% of identified proteins and 75% of phosphorylation sites exhibit changes in abundance as the intraerythrocytic cycle progresses. Our study identified 43 distinct phosphorylation motifs and a range of potential MAPK/CDK substrates. Further analysis of phosphorylated kinases identified 30 protein kinases with 126 phosphorylation sites within the kinase domain or in N- or C-terminal tails. Many of these phosphorylations are likely CK2-mediated. We define the constitutive and regulated expression of the Plasmodium proteome during the intraerythrocytic developmental cycle, offering an insight into the dynamics of phosphorylation during asexual cycle progression. Our system-wide comprehensive analysis is a major step toward defining kinase-substrate pairs operative in various signaling networks in the parasite.
- Published
- 2013
47. Comprehensive histone phosphorylation analysis and identification of Pf14-3-3 protein as a histone H3 phosphorylation reader in malaria parasites
- Author
-
Kristina Dzeyk, Eeshita G Dastidar, Nicholas A. Malmquist, Jeroen Krijgsveld, Jose-Juan Lopez-Rubio, Artur Scherf, and Christian Doerig
- Subjects
Proteomics ,Models, Molecular ,Erythrocytes ,Protozoan Proteins ,Gene Expression ,lcsh:Medicine ,Pathogenesis ,Protozoology ,Histones ,0302 clinical medicine ,Tandem Mass Spectrometry ,Molecular Cell Biology ,Histone methylation ,Histone code ,Histone octamer ,Malaria, Falciparum ,Phosphorylation ,lcsh:Science ,0303 health sciences ,Multidisciplinary ,Histone Modification ,Chromatin ,3. Good health ,Cell biology ,Infectious Diseases ,Histone phosphorylation ,Histone methyltransferase ,Medicine ,Epigenetics ,Research Article ,Protein Binding ,Molecular Sequence Data ,Plasmodium falciparum ,Biology ,Microbiology ,Peptide Mapping ,03 medical and health sciences ,Histone H3 ,Histone H1 ,Histone H2A ,Genetics ,Parasitic Diseases ,Humans ,Amino Acid Sequence ,030304 developmental biology ,lcsh:R ,Tropical Diseases (Non-Neglected) ,Molecular biology ,Malaria ,14-3-3 Proteins ,Parastic Protozoans ,lcsh:Q ,Sequence Alignment ,030217 neurology & neurosurgery - Abstract
The important role of histone posttranslational modifications, particularly methylation and acetylation, in Plasmodium falciparum gene regulation has been established. However, the role of histone phosphorylation remains understudied. Here, we investigate histone phosphorylation utilizing liquid chromatography and tandem mass spectrometry to analyze histones extracted from asexual blood stages using two improved protocols to enhance preservation of PTMs. Enrichment for phosphopeptides lead to the detection of 14 histone phospho-modifications in P. falciparum. The majority of phosphorylation sites were observed at the N-terminal regions of various histones and were frequently observed adjacent to acetylated lysines. We also report the identification of one novel member of the P. falciparum histone phosphosite binding protein repertoire, Pf14-3-3I. Recombinant Pf14-3-3I protein bound to purified parasite histones. In silico structural analysis of Pf14-3-3 proteins revealed that residues responsible for binding to histone H3 S10ph and/or S28ph are conserved at the primary and the tertiary structure levels. Using a battery of H3 specific phosphopeptides, we demonstrate that Pf14-3-3I preferentially binds to H3S28ph over H3S10ph, independent of modification of neighbouring residues like H3S10phK14ac and H3S28phS32ph. Our data provide key insight into histone phosphorylation sites. The identification of a second member of the histone modification reading machinery suggests a widespread use of histone phosphorylation in the control of various nuclear processes in malaria parasites.
- Published
- 2013
48. PAK in pathogen-host interactions
- Author
-
Christian Doerig and Jean-Philippe Semblat
- Subjects
Plasmodium ,viruses ,Review ,medicine.disease_cause ,p21-activated kinase ,Biochemistry ,Virus ,Microbiology ,Helicobacter ,Pseudomonas ,parasitic diseases ,medicine ,Pathogen ,biology ,Pseudomonas aeruginosa ,Host (biology) ,HIV ,Plasmodium falciparum ,Cell Biology ,biology.organism_classification ,Virology ,Lentivirus ,Molecular Medicine ,influenza ,pathogen - Abstract
Eukaryotic, prokaryotic and viral pathogens are known to interfere with signaling pathways of their host to promote their own survival and proliferation. Here, we present selected examples of modulation of PAK activity in human cells by both intracellular and extracellular pathogens, focusing on one eukaryotic pathogen, the human malaria parasite Plasmodium falciparum, two Gram-negative bacteria (Helicobacter pylori and Pseudomonas aeruginosa), and two viruses belonging to distinct groups, the lentivirus HIV and the orthomyxovirus Influenza virus A.
- Published
- 2012
49. Involvement of Plasmodium falciparum protein kinase CK2 in the chromatin assembly pathway
- Author
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Dominique Dorin-Semblat, Amit Sharma, Romain Hamelin, Artur Scherf, Guillem Dayer, Arnaud Chêne, Zoe Holland, Aurélie Claes, Marc Moniatte, Eeshita G Dastidar, Christian Doerig, Jose-Juan Lopez-Rubio, Biologie des Interactions Hôte-Parasite, Institut Pasteur [Paris]-Centre National de la Recherche Scientifique (CNRS), Kinomique fonctionelle des parasites responsables du paludisme, Ecole Polytechnique Fédérale de Lausanne (EPFL)-Institut National de la Santé et de la Recherche Médicale (INSERM), Centre for Molecular Parasitology, University of Glasgow-Wellcome Trust, International Centre for Genetic Engineering and Biotechnology, International Centre for Genetic Engineering and Biotechnology (ICGEB), Proteomics Core Facility, Ecole Polytechnique Fédérale de Lausanne (EPFL), Microbiology, Monash University [Clayton], This research received funding from Inserm, EPFL and the European Community's Seventh Framework Programme (FP7/2007-2013) (MALSIG project to CD and ASh and EviMalar network of Excellence to CD and ASc), by Inserm, EPFL, the FP6 (SIGMAL and ANTIMAL projects to CD and BioMalPar network of Excellence to ASc), and by a European Research Council Executive Agency Advanced Grant (PlasmoEscape 250320) to ASs. EGD benefits from a PhD fellowship funded by the European Union Framework Program 7 Marie Curie Initial Training Network 'Intervention strategies against malaria (InterMalTraining)', contract number 215281. ZMH benefitted from a PhD Studentship form the Wellcome Trust. A postdoctoral fellowship from the Conseil Régional d'Île-de-France (DIM Malinf) to AC is gratefully acknowledged., European Project: 223044,EC:FP7:HEALTH,FP7-HEALTH-2007-B,MALSIG(2009), Institut Pasteur [Paris] (IP)-Centre National de la Recherche Scientifique (CNRS), BMC, Ed., and Signalling in life cycle stages of malaria parasites - MALSIG - - EC:FP7:HEALTH2009-02-01 - 2012-07-31 - 223044 - VALID
- Subjects
Nucleosome assembly ,Statistical-Model ,Physiology ,Protozoan Proteins ,Plant Science ,Mass Spectrometry ,MAP2K7 ,Histones ,Structural Biology ,Virulence Genes ,Phosphorylation ,Casein Kinase II ,lcsh:QH301-705.5 ,0303 health sciences ,Artemisinin Resistance ,Agricultural and Biological Sciences(all) ,030302 biochemistry & molecular biology ,Antigenic Variation ,Chromatin ,Cell biology ,Hemagglutinins ,[SDV.MP]Life Sciences [q-bio]/Microbiology and Parasitology ,Functional-Characterization ,Casein kinase 2 ,General Agricultural and Biological Sciences ,Biotechnology ,Research Article ,Life-Cycle ,Protein subunit ,Plasmodium falciparum ,Biology ,General Biochemistry, Genetics and Molecular Biology ,03 medical and health sciences ,parasitic diseases ,[SDV.BBM] Life Sciences [q-bio]/Biochemistry, Molecular Biology ,Saccharomyces-Cerevisiae ,Integrin-linked kinase ,Histone Chaperones ,[SDV.BBM]Life Sciences [q-bio]/Biochemistry, Molecular Biology ,c-Raf ,[SDV.MP] Life Sciences [q-bio]/Microbiology and Parasitology ,Ecology, Evolution, Behavior and Systematics ,030304 developmental biology ,Serine/threonine-specific protein kinase ,Biochemistry, Genetics and Molecular Biology(all) ,Cell Biology ,Chromatin Assembly and Disassembly ,Microscopy, Electron ,Gene Expression Regulation ,Microscopy, Fluorescence ,lcsh:Biology (General) ,Localization ,Regulatory Beta-Subunit ,biology.protein ,Malaria Parasites ,Developmental Biology - Abstract
Background Protein kinase CK2 is a pleiotropic serine/threonine protein kinase with hundreds of reported substrates, and plays an important role in a number of cellular processes. The cellular functions of Plasmodium falciparum CK2 (PfCK2) are unknown. The parasite's genome encodes one catalytic subunit, PfCK2α, which we have previously shown to be essential for completion of the asexual erythrocytic cycle, and two putative regulatory subunits, PfCK2β1 and PfCK2β2. Results We now show that the genes encoding both regulatory PfCK2 subunits (PfCK2β1 and PfCK2β2) cannot be disrupted. Using immunofluorescence and electron microscopy, we examined the intra-erythrocytic stages of transgenic parasite lines expressing hemagglutinin (HA)-tagged catalytic and regulatory subunits (HA-CK2α, HA-PfCK2β1 or HA-PfCK2β2), and localized all three subunits to both cytoplasmic and nuclear compartments of the parasite. The same transgenic parasite lines were used to purify PfCK2β1- and PfCK2β2-containing complexes, which were analyzed by mass spectrometry. The recovered proteins were unevenly distributed between various pathways, with a large proportion of components of the chromatin assembly pathway being present in both PfCK2β1 and PfCK2β2 precipitates, implicating PfCK2 in chromatin dynamics. We also found that chromatin-related substrates such as nucleosome assembly proteins (Naps), histones, and two members of the Alba family are phosphorylated by PfCK2α in vitro. Conclusions Our reverse-genetics data show that each of the two regulatory PfCK2 subunits is required for completion of the asexual erythrocytic cycle. Our interactome study points to an implication of PfCK2 in many cellular pathways, with chromatin dynamics being identified as a major process regulated by PfCK2. This study paves the way for a kinome-wide interactomics-based approach to elucidate protein kinase function in malaria parasites.
- Published
- 2012
50. Toxoplasma and Plasmodium protein kinases: Roles in invasion and host cell remodelling
- Author
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Brian M. Cooke, Jeroen P. J. Saeij, Daniel Lim, Christian Doerig, Massachusetts Institute of Technology. Department of Biology, Koch Institute for Integrative Cancer Research at MIT, Lim, Daniel Cham-Chin, and Saeij, Jeroen
- Subjects
Virulence Factors ,Plasmodium falciparum ,Coenzymes ,Plasmodium ,Article ,03 medical and health sciences ,parasitic diseases ,Protein kinase A ,030304 developmental biology ,0303 health sciences ,Rhoptry ,biology ,Kinase ,030302 biochemistry & molecular biology ,biology.organism_classification ,3. Good health ,Cell biology ,Infectious Diseases ,CDC37 ,Mitogen-activated protein kinase ,Proteome ,biology.protein ,Parasitology ,Calcium ,Protein Kinases ,Toxoplasma ,Intracellular - Abstract
Some apicomplexan parasites have evolved distinct protein kinase families to modulate host cell structure and function. Toxoplasma gondii rhoptry protein kinases and pseudokinases are involved in virulence and modulation of host cell signalling. The proteome of Plasmodium falciparum contains a family of putative kinases called FIKKs, some of which are exported to the host red blood cell and might play a role in erythrocyte remodelling. In this review we will discuss kinases known to be critical for host cell invasion, intracellular growth and egress, focusing on (i) calcium-dependent protein kinases and (ii) the secreted kinases that are unique to Toxoplasma (rhoptry protein kinases and pseudokinases) and Plasmodium (FIKKs)., American Heart Association (0835099N), Massachusetts Life Sciences Center (New Investigator Award), Singapore-MIT Alliance for Research and Technology, Pew Charitable Trusts, New England Regional Center of Excellence (Developmental Grant), National Institutes of Health (U.S.) (RO1-AI080621), Merck Research Laboratories (Postdoctoral Fellowship), Massachusetts Institute of Technology. Department of Biology
- Published
- 2011
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