1. UV‐Induced Charge‐Transfer States in Short Guanosine‐Containing DNA Oligonucleotides
- Author
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Dominik B. Bucher, Wolfgang Zinth, and Corinna L. Kufner
- Subjects
Ultraviolet Rays ,DNA damage ,Guanine ,picosecond IR spectroscopy ,Oligonucleotides ,Guanosine ,Electron donor ,010402 general chemistry ,Photochemistry ,01 natural sciences ,Biochemistry ,Electron Transport ,chemistry.chemical_compound ,Very Important Paper ,guanine ,Nucleotide ,Molecular Biology ,photophysics ,chemistry.chemical_classification ,Full Paper ,Base Sequence ,010405 organic chemistry ,Oligonucleotide ,Organic Chemistry ,charge transfer ,DNA ,Full Papers ,Photochemical Processes ,ddc ,0104 chemical sciences ,chemistry ,Picosecond ,Molecular Medicine - Abstract
Charge transfer has proven to be an important mechanism in DNA photochemistry. In particular, guanine (dG) plays a major role as an electron donor, but the photophysical dynamics of dG‐containing charge‐transfer states have not been extensively investigated so far. Here, we use UV pump (266 nm) and picosecond IR probe (∼5–7 μm) spectroscopy to study ultrafast dynamics in dG‐containing short oligonucleotides as a function of sequence and length. For the pure purine oligomers, we observed lifetimes for the charge‐transfer states of the order of several hundreds of picoseconds, regardless of the oligonucleotide length. In contrast, pyrimidine‐containing dinucleotides d(GT) and d(GC) show much faster relaxation dynamics in the 10 to 30 ps range. In all studied nucleotides, the charge‐transfer states are formed with an efficiency of the order of ∼50 %. These photophysical characteristics will lead to an improved understanding of DNA damage and repair processes., Studying the photophysical dynamics of dG‐containing oligonucleotides by time‐resolved IR spectroscopy showed transient absorption changes pointing to excitation decay and vibrational cooling within a few picoseconds. On the 10‐500 picosecond time range transient charge‐transfer states were identified which are efficiently formed in these oligomers. The known reactivity and the high formation yield make charge‐transfer states important promoters for secondary reactions in DNA.
- Published
- 2020
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